
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/13/Correlate_Genomic_Events.R")
> result <- main("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/13/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-tTRUE", "-iD=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/KIRP-TP/6159732/transformed.cor.cli.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/KIRP-TP/6159654/KIRP-TP.transferedmergedcluster.txt", "-fF=", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=0.05", "-cQ=0.25", "-MF=ONLYSIG", "-oT=KIRP-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=KIRP-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/KIRP-TP/6159654/KIRP-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/KIRP-TP/6159732/transformed.cor.cli.txt"

nPatients in clinical file=172, in cluster file=172, common to both=172
[1] "Reduce the number of clustering variables from 80 to 69."
[1]  69 172
[1] "1P GAIN MUTATION ANALYSIS"
[1] 3
  1P GAIN MUTATED 1P GAIN WILD-TYPE 
                5               167 
  1P GAIN MUTATED 1P GAIN WILD-TYPE 
                5               167 
[1] "1Q GAIN MUTATION ANALYSIS"
[1] 3
  1Q GAIN MUTATED 1Q GAIN WILD-TYPE 
               14               158 
  1Q GAIN MUTATED 1Q GAIN WILD-TYPE 
               14               158 
[1] "2P GAIN MUTATION ANALYSIS"
[1] 3
  2P GAIN MUTATED 2P GAIN WILD-TYPE 
               32               140 
  2P GAIN MUTATED 2P GAIN WILD-TYPE 
               32               140 
[1] "2Q GAIN MUTATION ANALYSIS"
[1] 3
  2Q GAIN MUTATED 2Q GAIN WILD-TYPE 
               35               137 
  2Q GAIN MUTATED 2Q GAIN WILD-TYPE 
               35               137 
[1] "3P GAIN MUTATION ANALYSIS"
[1] 3
  3P GAIN MUTATED 3P GAIN WILD-TYPE 
               46               126 
  3P GAIN MUTATED 3P GAIN WILD-TYPE 
               46               126 
[1] "3Q GAIN MUTATION ANALYSIS"
[1] 3
  3Q GAIN MUTATED 3Q GAIN WILD-TYPE 
               55               117 
  3Q GAIN MUTATED 3Q GAIN WILD-TYPE 
               55               117 
[1] "4P GAIN MUTATION ANALYSIS"
[1] 3
  4P GAIN MUTATED 4P GAIN WILD-TYPE 
                6               166 
  4P GAIN MUTATED 4P GAIN WILD-TYPE 
                6               166 
[1] "4Q GAIN MUTATION ANALYSIS"
[1] 3
  4Q GAIN MUTATED 4Q GAIN WILD-TYPE 
                5               167 
  4Q GAIN MUTATED 4Q GAIN WILD-TYPE 
                5               167 
[1] "5P GAIN MUTATION ANALYSIS"
[1] 3
  5P GAIN MUTATED 5P GAIN WILD-TYPE 
               26               146 
  5P GAIN MUTATED 5P GAIN WILD-TYPE 
               26               146 
[1] "5Q GAIN MUTATION ANALYSIS"
[1] 3
  5Q GAIN MUTATED 5Q GAIN WILD-TYPE 
               26               146 
  5Q GAIN MUTATED 5Q GAIN WILD-TYPE 
               26               146 
[1] "6P GAIN MUTATION ANALYSIS"
[1] 3
  6P GAIN MUTATED 6P GAIN WILD-TYPE 
                8               164 
  6P GAIN MUTATED 6P GAIN WILD-TYPE 
                8               164 
[1] "6Q GAIN MUTATION ANALYSIS"
[1] 3
  6Q GAIN MUTATED 6Q GAIN WILD-TYPE 
                6               166 
  6Q GAIN MUTATED 6Q GAIN WILD-TYPE 
                6               166 
[1] "7P GAIN MUTATION ANALYSIS"
[1] 3
  7P GAIN MUTATED 7P GAIN WILD-TYPE 
              100                72 
  7P GAIN MUTATED 7P GAIN WILD-TYPE 
              100                72 
[1] "7Q GAIN MUTATION ANALYSIS"
[1] 3
  7Q GAIN MUTATED 7Q GAIN WILD-TYPE 
              101                71 
  7Q GAIN MUTATED 7Q GAIN WILD-TYPE 
              101                71 
[1] "8P GAIN MUTATION ANALYSIS"
[1] 3
  8P GAIN MUTATED 8P GAIN WILD-TYPE 
               12               160 
  8P GAIN MUTATED 8P GAIN WILD-TYPE 
               12               160 
[1] "8Q GAIN MUTATION ANALYSIS"
[1] 3
  8Q GAIN MUTATED 8Q GAIN WILD-TYPE 
               15               157 
  8Q GAIN MUTATED 8Q GAIN WILD-TYPE 
               15               157 
[1] "9P GAIN MUTATION ANALYSIS"
[1] 3
  9P GAIN MUTATED 9P GAIN WILD-TYPE 
                3               169 
  9P GAIN MUTATED 9P GAIN WILD-TYPE 
                3               169 
[1] "10P GAIN MUTATION ANALYSIS"
[1] 3
  10P GAIN MUTATED 10P GAIN WILD-TYPE 
                 5                167 
  10P GAIN MUTATED 10P GAIN WILD-TYPE 
                 5                167 
[1] "10Q GAIN MUTATION ANALYSIS"
[1] 3
  10Q GAIN MUTATED 10Q GAIN WILD-TYPE 
                 5                167 
  10Q GAIN MUTATED 10Q GAIN WILD-TYPE 
                 5                167 
[1] "11P GAIN MUTATION ANALYSIS"
[1] 3
  11P GAIN MUTATED 11P GAIN WILD-TYPE 
                 8                164 
  11P GAIN MUTATED 11P GAIN WILD-TYPE 
                 8                164 
[1] "11Q GAIN MUTATION ANALYSIS"
[1] 3
  11Q GAIN MUTATED 11Q GAIN WILD-TYPE 
                 7                165 
  11Q GAIN MUTATED 11Q GAIN WILD-TYPE 
                 7                165 
[1] "12P GAIN MUTATION ANALYSIS"
[1] 3
  12P GAIN MUTATED 12P GAIN WILD-TYPE 
                68                104 
  12P GAIN MUTATED 12P GAIN WILD-TYPE 
                68                104 
[1] "12Q GAIN MUTATION ANALYSIS"
[1] 3
  12Q GAIN MUTATED 12Q GAIN WILD-TYPE 
                68                104 
  12Q GAIN MUTATED 12Q GAIN WILD-TYPE 
                68                104 
[1] "13Q GAIN MUTATION ANALYSIS"
[1] 3
  13Q GAIN MUTATED 13Q GAIN WILD-TYPE 
                19                153 
  13Q GAIN MUTATED 13Q GAIN WILD-TYPE 
                19                153 
[1] "14Q GAIN MUTATION ANALYSIS"
[1] 3
  14Q GAIN MUTATED 14Q GAIN WILD-TYPE 
                 3                169 
  14Q GAIN MUTATED 14Q GAIN WILD-TYPE 
                 3                169 
[1] "15Q GAIN MUTATION ANALYSIS"
[1] 3
  15Q GAIN MUTATED 15Q GAIN WILD-TYPE 
                 5                167 
  15Q GAIN MUTATED 15Q GAIN WILD-TYPE 
                 5                167 
[1] "16P GAIN MUTATION ANALYSIS"
[1] 3
  16P GAIN MUTATED 16P GAIN WILD-TYPE 
                89                 83 
  16P GAIN MUTATED 16P GAIN WILD-TYPE 
                89                 83 
[1] "16Q GAIN MUTATION ANALYSIS"
[1] 3
  16Q GAIN MUTATED 16Q GAIN WILD-TYPE 
                85                 87 
  16Q GAIN MUTATED 16Q GAIN WILD-TYPE 
                85                 87 
[1] "17P GAIN MUTATION ANALYSIS"
[1] 3
  17P GAIN MUTATED 17P GAIN WILD-TYPE 
               102                 70 
  17P GAIN MUTATED 17P GAIN WILD-TYPE 
               102                 70 
[1] "17Q GAIN MUTATION ANALYSIS"
[1] 3
  17Q GAIN MUTATED 17Q GAIN WILD-TYPE 
               117                 55 
  17Q GAIN MUTATED 17Q GAIN WILD-TYPE 
               117                 55 
[1] "18P GAIN MUTATION ANALYSIS"
[1] 3
  18P GAIN MUTATED 18P GAIN WILD-TYPE 
                 9                163 
  18P GAIN MUTATED 18P GAIN WILD-TYPE 
                 9                163 
[1] "18Q GAIN MUTATION ANALYSIS"
[1] 3
  18Q GAIN MUTATED 18Q GAIN WILD-TYPE 
                 5                167 
  18Q GAIN MUTATED 18Q GAIN WILD-TYPE 
                 5                167 
[1] "19P GAIN MUTATION ANALYSIS"
[1] 3
  19P GAIN MUTATED 19P GAIN WILD-TYPE 
                 3                169 
  19P GAIN MUTATED 19P GAIN WILD-TYPE 
                 3                169 
[1] "19Q GAIN MUTATION ANALYSIS"
[1] 3
  19Q GAIN MUTATED 19Q GAIN WILD-TYPE 
                 3                169 
  19Q GAIN MUTATED 19Q GAIN WILD-TYPE 
                 3                169 
[1] "20P GAIN MUTATION ANALYSIS"
[1] 3
  20P GAIN MUTATED 20P GAIN WILD-TYPE 
                58                114 
  20P GAIN MUTATED 20P GAIN WILD-TYPE 
                58                114 
[1] "20Q GAIN MUTATION ANALYSIS"
[1] 3
  20Q GAIN MUTATED 20Q GAIN WILD-TYPE 
                60                112 
  20Q GAIN MUTATED 20Q GAIN WILD-TYPE 
                60                112 
[1] "21Q GAIN MUTATION ANALYSIS"
[1] 3
  21Q GAIN MUTATED 21Q GAIN WILD-TYPE 
                12                160 
  21Q GAIN MUTATED 21Q GAIN WILD-TYPE 
                12                160 
[1] "XQ GAIN MUTATION ANALYSIS"
[1] 3
  XQ GAIN MUTATED XQ GAIN WILD-TYPE 
               54               118 
  XQ GAIN MUTATED XQ GAIN WILD-TYPE 
               54               118 
[1] "1P LOSS MUTATION ANALYSIS"
[1] 3
  1P LOSS MUTATED 1P LOSS WILD-TYPE 
               21               151 
  1P LOSS MUTATED 1P LOSS WILD-TYPE 
               21               151 
[1] "1Q LOSS MUTATION ANALYSIS"
[1] 3
  1Q LOSS MUTATED 1Q LOSS WILD-TYPE 
               13               159 
  1Q LOSS MUTATED 1Q LOSS WILD-TYPE 
               13               159 
[1] "3P LOSS MUTATION ANALYSIS"
[1] 3
  3P LOSS MUTATED 3P LOSS WILD-TYPE 
               14               158 
  3P LOSS MUTATED 3P LOSS WILD-TYPE 
               14               158 
[1] "3Q LOSS MUTATION ANALYSIS"
[1] 3
  3Q LOSS MUTATED 3Q LOSS WILD-TYPE 
                4               168 
  3Q LOSS MUTATED 3Q LOSS WILD-TYPE 
                4               168 
[1] "4P LOSS MUTATION ANALYSIS"
[1] 3
  4P LOSS MUTATED 4P LOSS WILD-TYPE 
               18               154 
  4P LOSS MUTATED 4P LOSS WILD-TYPE 
               18               154 
[1] "4Q LOSS MUTATION ANALYSIS"
[1] 3
  4Q LOSS MUTATED 4Q LOSS WILD-TYPE 
               19               153 
  4Q LOSS MUTATED 4Q LOSS WILD-TYPE 
               19               153 
[1] "5P LOSS MUTATION ANALYSIS"
[1] 3
  5P LOSS MUTATED 5P LOSS WILD-TYPE 
                7               165 
  5P LOSS MUTATED 5P LOSS WILD-TYPE 
                7               165 
[1] "5Q LOSS MUTATION ANALYSIS"
[1] 3
  5Q LOSS MUTATED 5Q LOSS WILD-TYPE 
                7               165 
  5Q LOSS MUTATED 5Q LOSS WILD-TYPE 
                7               165 
[1] "6P LOSS MUTATION ANALYSIS"
[1] 3
  6P LOSS MUTATED 6P LOSS WILD-TYPE 
               12               160 
  6P LOSS MUTATED 6P LOSS WILD-TYPE 
               12               160 
[1] "6Q LOSS MUTATION ANALYSIS"
[1] 3
  6Q LOSS MUTATED 6Q LOSS WILD-TYPE 
               15               157 
  6Q LOSS MUTATED 6Q LOSS WILD-TYPE 
               15               157 
[1] "8P LOSS MUTATION ANALYSIS"
[1] 3
  8P LOSS MUTATED 8P LOSS WILD-TYPE 
                6               166 
  8P LOSS MUTATED 8P LOSS WILD-TYPE 
                6               166 
[1] "8Q LOSS MUTATION ANALYSIS"
[1] 3
  8Q LOSS MUTATED 8Q LOSS WILD-TYPE 
                4               168 
  8Q LOSS MUTATED 8Q LOSS WILD-TYPE 
                4               168 
[1] "9P LOSS MUTATION ANALYSIS"
[1] 3
  9P LOSS MUTATED 9P LOSS WILD-TYPE 
               22               150 
  9P LOSS MUTATED 9P LOSS WILD-TYPE 
               22               150 
[1] "9Q LOSS MUTATION ANALYSIS"
[1] 3
  9Q LOSS MUTATED 9Q LOSS WILD-TYPE 
               24               148 
  9Q LOSS MUTATED 9Q LOSS WILD-TYPE 
               24               148 
[1] "10P LOSS MUTATION ANALYSIS"
[1] 3
  10P LOSS MUTATED 10P LOSS WILD-TYPE 
                12                160 
  10P LOSS MUTATED 10P LOSS WILD-TYPE 
                12                160 
[1] "10Q LOSS MUTATION ANALYSIS"
[1] 3
  10Q LOSS MUTATED 10Q LOSS WILD-TYPE 
                12                160 
  10Q LOSS MUTATED 10Q LOSS WILD-TYPE 
                12                160 
[1] "11P LOSS MUTATION ANALYSIS"
[1] 3
  11P LOSS MUTATED 11P LOSS WILD-TYPE 
                10                162 
  11P LOSS MUTATED 11P LOSS WILD-TYPE 
                10                162 
[1] "11Q LOSS MUTATION ANALYSIS"
[1] 3
  11Q LOSS MUTATED 11Q LOSS WILD-TYPE 
                14                158 
  11Q LOSS MUTATED 11Q LOSS WILD-TYPE 
                14                158 
[1] "13Q LOSS MUTATION ANALYSIS"
[1] 3
  13Q LOSS MUTATED 13Q LOSS WILD-TYPE 
                17                155 
  13Q LOSS MUTATED 13Q LOSS WILD-TYPE 
                17                155 
[1] "14Q LOSS MUTATION ANALYSIS"
[1] 3
  14Q LOSS MUTATED 14Q LOSS WILD-TYPE 
                34                138 
  14Q LOSS MUTATED 14Q LOSS WILD-TYPE 
                34                138 
[1] "15Q LOSS MUTATION ANALYSIS"
[1] 3
  15Q LOSS MUTATED 15Q LOSS WILD-TYPE 
                19                153 
  15Q LOSS MUTATED 15Q LOSS WILD-TYPE 
                19                153 
[1] "16P LOSS MUTATION ANALYSIS"
[1] 3
  16P LOSS MUTATED 16P LOSS WILD-TYPE 
                 4                168 
  16P LOSS MUTATED 16P LOSS WILD-TYPE 
                 4                168 
[1] "16Q LOSS MUTATION ANALYSIS"
[1] 3
  16Q LOSS MUTATED 16Q LOSS WILD-TYPE 
                 5                167 
  16Q LOSS MUTATED 16Q LOSS WILD-TYPE 
                 5                167 
[1] "17P LOSS MUTATION ANALYSIS"
[1] 3
  17P LOSS MUTATED 17P LOSS WILD-TYPE 
                 8                164 
  17P LOSS MUTATED 17P LOSS WILD-TYPE 
                 8                164 
[1] "18P LOSS MUTATION ANALYSIS"
[1] 3
  18P LOSS MUTATED 18P LOSS WILD-TYPE 
                28                144 
  18P LOSS MUTATED 18P LOSS WILD-TYPE 
                28                144 
[1] "18Q LOSS MUTATION ANALYSIS"
[1] 3
  18Q LOSS MUTATED 18Q LOSS WILD-TYPE 
                30                142 
  18Q LOSS MUTATED 18Q LOSS WILD-TYPE 
                30                142 
[1] "19P LOSS MUTATION ANALYSIS"
[1] 3
  19P LOSS MUTATED 19P LOSS WILD-TYPE 
                12                160 
  19P LOSS MUTATED 19P LOSS WILD-TYPE 
                12                160 
[1] "19Q LOSS MUTATION ANALYSIS"
[1] 3
  19Q LOSS MUTATED 19Q LOSS WILD-TYPE 
                11                161 
  19Q LOSS MUTATED 19Q LOSS WILD-TYPE 
                11                161 
[1] "21Q LOSS MUTATION ANALYSIS"
[1] 3
  21Q LOSS MUTATED 21Q LOSS WILD-TYPE 
                30                142 
  21Q LOSS MUTATED 21Q LOSS WILD-TYPE 
                30                142 
[1] "22Q LOSS MUTATION ANALYSIS"
[1] 3
  22Q LOSS MUTATED 22Q LOSS WILD-TYPE 
                41                131 
  22Q LOSS MUTATED 22Q LOSS WILD-TYPE 
                41                131 
[1] "XQ LOSS MUTATION ANALYSIS"
[1] 3
  XQ LOSS MUTATED XQ LOSS WILD-TYPE 
               20               152 
  XQ LOSS MUTATED XQ LOSS WILD-TYPE 
               20               152 
[1] "terrence_modification_tag"
[1] TRUE
[1] "data2feature, selection="
[1] "CN_CNMF"                     "METHLYATION_CNMF"           
[3] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
[5] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[7] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 8 rows and 172 columns.

Variable 1:'CN_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'MRNASEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_MATURE_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
[1] "CN_CNMF"                     "METHLYATION_CNMF"           
[3] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
[5] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[7] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 172 columns, 0 survival variables, and 8 non-survival variables.
CN_CNMF, nv=4, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = 1P GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1P GAIN MUTATED        0      0      0      5
  1P GAIN WILD-TYPE     33     68     37     29
D1V1, multiclass
        clus
vv       1P GAIN MUTATED 1P GAIN WILD-TYPE
  CLUS_1               0                33
  CLUS_2               0                68
  CLUS_3               0                37
  CLUS_4               5                29
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P GAIN MUTATED        0      5      0
  1P GAIN WILD-TYPE     43     38     70
D1V2, multiclass
        clus
vv       1P GAIN MUTATED 1P GAIN WILD-TYPE
  CLUS_1               0                43
  CLUS_2               5                38
  CLUS_3               0                70
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1P GAIN MUTATED        5      0      0      0
  1P GAIN WILD-TYPE     53     49     31     23
D1V3, multiclass
        clus
vv       1P GAIN MUTATED 1P GAIN WILD-TYPE
  CLUS_1               5                53
  CLUS_2               0                49
  CLUS_3               0                31
  CLUS_4               0                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P GAIN MUTATED        3      2      0
  1P GAIN WILD-TYPE     28     64     64
D1V4, multiclass
        clus
vv       1P GAIN MUTATED 1P GAIN WILD-TYPE
  CLUS_1               3                28
  CLUS_2               2                64
  CLUS_3               0                64
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P GAIN MUTATED        0      2      3
  1P GAIN WILD-TYPE     56     60     51
D1V5, multiclass
        clus
vv       1P GAIN MUTATED 1P GAIN WILD-TYPE
  CLUS_1               0                56
  CLUS_2               2                60
  CLUS_3               3                51
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P GAIN MUTATED        0      0      5
  1P GAIN WILD-TYPE     18     80     69
D1V6, multiclass
        clus
vv       1P GAIN MUTATED 1P GAIN WILD-TYPE
  CLUS_1               0                18
  CLUS_2               0                80
  CLUS_3               5                69
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P GAIN MUTATED        0      2      3
  1P GAIN WILD-TYPE     54     63     50
D1V7, multiclass
        clus
vv       1P GAIN MUTATED 1P GAIN WILD-TYPE
  CLUS_1               0                54
  CLUS_2               2                63
  CLUS_3               3                50
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P GAIN MUTATED        0      1      4
  1P GAIN WILD-TYPE     14     86     67
D1V8, multiclass
        clus
vv       1P GAIN MUTATED 1P GAIN WILD-TYPE
  CLUS_1               0                14
  CLUS_2               1                86
  CLUS_3               4                67

Clustering(2) Variable = 1Q GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1Q GAIN MUTATED        0      2      1     11
  1Q GAIN WILD-TYPE     33     66     36     23
D2V1, multiclass
        clus
vv       1Q GAIN MUTATED 1Q GAIN WILD-TYPE
  CLUS_1               0                33
  CLUS_2               2                66
  CLUS_3               1                36
  CLUS_4              11                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q GAIN MUTATED        0     12      1
  1Q GAIN WILD-TYPE     43     31     69
D2V2, multiclass
        clus
vv       1Q GAIN MUTATED 1Q GAIN WILD-TYPE
  CLUS_1               0                43
  CLUS_2              12                31
  CLUS_3               1                69
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1Q GAIN MUTATED       13      0      1      0
  1Q GAIN WILD-TYPE     45     49     30     23
D2V3, multiclass
        clus
vv       1Q GAIN MUTATED 1Q GAIN WILD-TYPE
  CLUS_1              13                45
  CLUS_2               0                49
  CLUS_3               1                30
  CLUS_4               0                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q GAIN MUTATED        5      9      0
  1Q GAIN WILD-TYPE     26     57     64
D2V4, multiclass
        clus
vv       1Q GAIN MUTATED 1Q GAIN WILD-TYPE
  CLUS_1               5                26
  CLUS_2               9                57
  CLUS_3               0                64
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q GAIN MUTATED        3      8      3
  1Q GAIN WILD-TYPE     53     54     51
D2V5, multiclass
        clus
vv       1Q GAIN MUTATED 1Q GAIN WILD-TYPE
  CLUS_1               3                53
  CLUS_2               8                54
  CLUS_3               3                51
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q GAIN MUTATED        5      0      9
  1Q GAIN WILD-TYPE     13     80     65
D2V6, multiclass
        clus
vv       1Q GAIN MUTATED 1Q GAIN WILD-TYPE
  CLUS_1               5                13
  CLUS_2               0                80
  CLUS_3               9                65
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q GAIN MUTATED        3      8      3
  1Q GAIN WILD-TYPE     51     57     50
D2V7, multiclass
        clus
vv       1Q GAIN MUTATED 1Q GAIN WILD-TYPE
  CLUS_1               3                51
  CLUS_2               8                57
  CLUS_3               3                50
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q GAIN MUTATED        3      3      8
  1Q GAIN WILD-TYPE     11     84     63
D2V8, multiclass
        clus
vv       1Q GAIN MUTATED 1Q GAIN WILD-TYPE
  CLUS_1               3                11
  CLUS_2               3                84
  CLUS_3               8                63

Clustering(3) Variable = 2P GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  2P GAIN MUTATED       12      2      3     15
  2P GAIN WILD-TYPE     21     66     34     19
D3V1, multiclass
        clus
vv       2P GAIN MUTATED 2P GAIN WILD-TYPE
  CLUS_1              12                21
  CLUS_2               2                66
  CLUS_3               3                34
  CLUS_4              15                19
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2P GAIN MUTATED        2     11     16
  2P GAIN WILD-TYPE     41     32     54
D3V2, multiclass
        clus
vv       2P GAIN MUTATED 2P GAIN WILD-TYPE
  CLUS_1               2                41
  CLUS_2              11                32
  CLUS_3              16                54
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  2P GAIN MUTATED       10     12      7      1
  2P GAIN WILD-TYPE     48     37     24     22
D3V3, multiclass
        clus
vv       2P GAIN MUTATED 2P GAIN WILD-TYPE
  CLUS_1              10                48
  CLUS_2              12                37
  CLUS_3               7                24
  CLUS_4               1                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2P GAIN MUTATED        7     11     12
  2P GAIN WILD-TYPE     24     55     52
D3V4, multiclass
        clus
vv       2P GAIN MUTATED 2P GAIN WILD-TYPE
  CLUS_1               7                24
  CLUS_2              11                55
  CLUS_3              12                52
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2P GAIN MUTATED        9      8     15
  2P GAIN WILD-TYPE     47     54     39
D3V5, multiclass
        clus
vv       2P GAIN MUTATED 2P GAIN WILD-TYPE
  CLUS_1               9                47
  CLUS_2               8                54
  CLUS_3              15                39
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2P GAIN MUTATED        3     17     12
  2P GAIN WILD-TYPE     15     63     62
D3V6, multiclass
        clus
vv       2P GAIN MUTATED 2P GAIN WILD-TYPE
  CLUS_1               3                15
  CLUS_2              17                63
  CLUS_3              12                62
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2P GAIN MUTATED        7      9     16
  2P GAIN WILD-TYPE     47     56     37
D3V7, multiclass
        clus
vv       2P GAIN MUTATED 2P GAIN WILD-TYPE
  CLUS_1               7                47
  CLUS_2               9                56
  CLUS_3              16                37
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2P GAIN MUTATED        3     17     12
  2P GAIN WILD-TYPE     11     70     59
D3V8, multiclass
        clus
vv       2P GAIN MUTATED 2P GAIN WILD-TYPE
  CLUS_1               3                11
  CLUS_2              17                70
  CLUS_3              12                59

Clustering(4) Variable = 2Q GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  2Q GAIN MUTATED       13      2      3     17
  2Q GAIN WILD-TYPE     20     66     34     17
D4V1, multiclass
        clus
vv       2Q GAIN MUTATED 2Q GAIN WILD-TYPE
  CLUS_1              13                20
  CLUS_2               2                66
  CLUS_3               3                34
  CLUS_4              17                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2Q GAIN MUTATED        3     11     18
  2Q GAIN WILD-TYPE     40     32     52
D4V2, multiclass
        clus
vv       2Q GAIN MUTATED 2Q GAIN WILD-TYPE
  CLUS_1               3                40
  CLUS_2              11                32
  CLUS_3              18                52
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  2Q GAIN MUTATED       10     13      7      3
  2Q GAIN WILD-TYPE     48     36     24     20
D4V3, multiclass
        clus
vv       2Q GAIN MUTATED 2Q GAIN WILD-TYPE
  CLUS_1              10                48
  CLUS_2              13                36
  CLUS_3               7                24
  CLUS_4               3                20
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2Q GAIN MUTATED        8     12     13
  2Q GAIN WILD-TYPE     23     54     51
D4V4, multiclass
        clus
vv       2Q GAIN MUTATED 2Q GAIN WILD-TYPE
  CLUS_1               8                23
  CLUS_2              12                54
  CLUS_3              13                51
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2Q GAIN MUTATED        9     10     16
  2Q GAIN WILD-TYPE     47     52     38
D4V5, multiclass
        clus
vv       2Q GAIN MUTATED 2Q GAIN WILD-TYPE
  CLUS_1               9                47
  CLUS_2              10                52
  CLUS_3              16                38
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2Q GAIN MUTATED        3     17     15
  2Q GAIN WILD-TYPE     15     63     59
D4V6, multiclass
        clus
vv       2Q GAIN MUTATED 2Q GAIN WILD-TYPE
  CLUS_1               3                15
  CLUS_2              17                63
  CLUS_3              15                59
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2Q GAIN MUTATED        7     11     17
  2Q GAIN WILD-TYPE     47     54     36
D4V7, multiclass
        clus
vv       2Q GAIN MUTATED 2Q GAIN WILD-TYPE
  CLUS_1               7                47
  CLUS_2              11                54
  CLUS_3              17                36
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2Q GAIN MUTATED        3     17     15
  2Q GAIN WILD-TYPE     11     70     56
D4V8, multiclass
        clus
vv       2Q GAIN MUTATED 2Q GAIN WILD-TYPE
  CLUS_1               3                11
  CLUS_2              17                70
  CLUS_3              15                56

Clustering(5) Variable = 3P GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3P GAIN MUTATED       31      6      5      4
  3P GAIN WILD-TYPE      2     62     32     30
D5V1, multiclass
        clus
vv       3P GAIN MUTATED 3P GAIN WILD-TYPE
  CLUS_1              31                 2
  CLUS_2               6                62
  CLUS_3               5                32
  CLUS_4               4                30
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P GAIN MUTATED       11      5     24
  3P GAIN WILD-TYPE     32     38     46
D5V2, multiclass
        clus
vv       3P GAIN MUTATED 3P GAIN WILD-TYPE
  CLUS_1              11                32
  CLUS_2               5                38
  CLUS_3              24                46
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3P GAIN MUTATED        4     19     12      9
  3P GAIN WILD-TYPE     54     30     19     14
D5V3, multiclass
        clus
vv       3P GAIN MUTATED 3P GAIN WILD-TYPE
  CLUS_1               4                54
  CLUS_2              19                30
  CLUS_3              12                19
  CLUS_4               9                14
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P GAIN MUTATED        4     18     22
  3P GAIN WILD-TYPE     27     48     42
D5V4, multiclass
        clus
vv       3P GAIN MUTATED 3P GAIN WILD-TYPE
  CLUS_1               4                27
  CLUS_2              18                48
  CLUS_3              22                42
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P GAIN MUTATED       15     12     19
  3P GAIN WILD-TYPE     41     50     35
D5V5, multiclass
        clus
vv       3P GAIN MUTATED 3P GAIN WILD-TYPE
  CLUS_1              15                41
  CLUS_2              12                50
  CLUS_3              19                35
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P GAIN MUTATED        0     28     18
  3P GAIN WILD-TYPE     18     52     56
D5V6, multiclass
        clus
vv       3P GAIN MUTATED 3P GAIN WILD-TYPE
  CLUS_1               0                18
  CLUS_2              28                52
  CLUS_3              18                56
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P GAIN MUTATED       14     14     18
  3P GAIN WILD-TYPE     40     51     35
D5V7, multiclass
        clus
vv       3P GAIN MUTATED 3P GAIN WILD-TYPE
  CLUS_1              14                40
  CLUS_2              14                51
  CLUS_3              18                35
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P GAIN MUTATED        0     29     17
  3P GAIN WILD-TYPE     14     58     54
D5V8, multiclass
        clus
vv       3P GAIN MUTATED 3P GAIN WILD-TYPE
  CLUS_1               0                14
  CLUS_2              29                58
  CLUS_3              17                54

Clustering(6) Variable = 3Q GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3Q GAIN MUTATED       32      9      6      8
  3Q GAIN WILD-TYPE      1     59     31     26
D6V1, multiclass
        clus
vv       3Q GAIN MUTATED 3Q GAIN WILD-TYPE
  CLUS_1              32                 1
  CLUS_2               9                59
  CLUS_3               6                31
  CLUS_4               8                26
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q GAIN MUTATED       12      8     29
  3Q GAIN WILD-TYPE     31     35     41
D6V2, multiclass
        clus
vv       3Q GAIN MUTATED 3Q GAIN WILD-TYPE
  CLUS_1              12                31
  CLUS_2               8                35
  CLUS_3              29                41
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3Q GAIN MUTATED        6     19     14     13
  3Q GAIN WILD-TYPE     52     30     17     10
D6V3, multiclass
        clus
vv       3Q GAIN MUTATED 3Q GAIN WILD-TYPE
  CLUS_1               6                52
  CLUS_2              19                30
  CLUS_3              14                17
  CLUS_4              13                10
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q GAIN MUTATED        5     23     24
  3Q GAIN WILD-TYPE     26     43     40
D6V4, multiclass
        clus
vv       3Q GAIN MUTATED 3Q GAIN WILD-TYPE
  CLUS_1               5                26
  CLUS_2              23                43
  CLUS_3              24                40
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q GAIN MUTATED       21     14     20
  3Q GAIN WILD-TYPE     35     48     34
D6V5, multiclass
        clus
vv       3Q GAIN MUTATED 3Q GAIN WILD-TYPE
  CLUS_1              21                35
  CLUS_2              14                48
  CLUS_3              20                34
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q GAIN MUTATED        2     33     20
  3Q GAIN WILD-TYPE     16     47     54
D6V6, multiclass
        clus
vv       3Q GAIN MUTATED 3Q GAIN WILD-TYPE
  CLUS_1               2                16
  CLUS_2              33                47
  CLUS_3              20                54
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q GAIN MUTATED       19     17     19
  3Q GAIN WILD-TYPE     35     48     34
D6V7, multiclass
        clus
vv       3Q GAIN MUTATED 3Q GAIN WILD-TYPE
  CLUS_1              19                35
  CLUS_2              17                48
  CLUS_3              19                34
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q GAIN MUTATED        1     35     19
  3Q GAIN WILD-TYPE     13     52     52
D6V8, multiclass
        clus
vv       3Q GAIN MUTATED 3Q GAIN WILD-TYPE
  CLUS_1               1                13
  CLUS_2              35                52
  CLUS_3              19                52

Clustering(7) Variable = 4P GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4P GAIN MUTATED        1      2      1      2
  4P GAIN WILD-TYPE     32     66     36     32
D7V1, multiclass
        clus
vv       4P GAIN MUTATED 4P GAIN WILD-TYPE
  CLUS_1               1                32
  CLUS_2               2                66
  CLUS_3               1                36
  CLUS_4               2                32
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P GAIN MUTATED        0      3      1
  4P GAIN WILD-TYPE     43     40     69
D7V2, multiclass
        clus
vv       4P GAIN MUTATED 4P GAIN WILD-TYPE
  CLUS_1               0                43
  CLUS_2               3                40
  CLUS_3               1                69
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4P GAIN MUTATED        3      2      1      0
  4P GAIN WILD-TYPE     55     47     30     23
D7V3, multiclass
        clus
vv       4P GAIN MUTATED 4P GAIN WILD-TYPE
  CLUS_1               3                55
  CLUS_2               2                47
  CLUS_3               1                30
  CLUS_4               0                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P GAIN MUTATED        1      2      3
  4P GAIN WILD-TYPE     30     64     61
D7V4, multiclass
        clus
vv       4P GAIN MUTATED 4P GAIN WILD-TYPE
  CLUS_1               1                30
  CLUS_2               2                64
  CLUS_3               3                61
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P GAIN MUTATED        2      2      2
  4P GAIN WILD-TYPE     54     60     52
D7V5, multiclass
        clus
vv       4P GAIN MUTATED 4P GAIN WILD-TYPE
  CLUS_1               2                54
  CLUS_2               2                60
  CLUS_3               2                52
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P GAIN MUTATED        2      2      2
  4P GAIN WILD-TYPE     16     78     72
D7V6, multiclass
        clus
vv       4P GAIN MUTATED 4P GAIN WILD-TYPE
  CLUS_1               2                16
  CLUS_2               2                78
  CLUS_3               2                72
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P GAIN MUTATED        1      2      3
  4P GAIN WILD-TYPE     53     63     50
D7V7, multiclass
        clus
vv       4P GAIN MUTATED 4P GAIN WILD-TYPE
  CLUS_1               1                53
  CLUS_2               2                63
  CLUS_3               3                50
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P GAIN MUTATED        2      1      3
  4P GAIN WILD-TYPE     12     86     68
D7V8, multiclass
        clus
vv       4P GAIN MUTATED 4P GAIN WILD-TYPE
  CLUS_1               2                12
  CLUS_2               1                86
  CLUS_3               3                68

Clustering(8) Variable = 4Q GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4Q GAIN MUTATED        1      2      1      1
  4Q GAIN WILD-TYPE     32     66     36     33
D8V1, multiclass
        clus
vv       4Q GAIN MUTATED 4Q GAIN WILD-TYPE
  CLUS_1               1                32
  CLUS_2               2                66
  CLUS_3               1                36
  CLUS_4               1                33
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q GAIN MUTATED        0      3      1
  4Q GAIN WILD-TYPE     43     40     69
D8V2, multiclass
        clus
vv       4Q GAIN MUTATED 4Q GAIN WILD-TYPE
  CLUS_1               0                43
  CLUS_2               3                40
  CLUS_3               1                69
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4Q GAIN MUTATED        2      2      1      0
  4Q GAIN WILD-TYPE     56     47     30     23
D8V3, multiclass
        clus
vv       4Q GAIN MUTATED 4Q GAIN WILD-TYPE
  CLUS_1               2                56
  CLUS_2               2                47
  CLUS_3               1                30
  CLUS_4               0                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q GAIN MUTATED        1      1      3
  4Q GAIN WILD-TYPE     30     65     61
D8V4, multiclass
        clus
vv       4Q GAIN MUTATED 4Q GAIN WILD-TYPE
  CLUS_1               1                30
  CLUS_2               1                65
  CLUS_3               3                61
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q GAIN MUTATED        2      1      2
  4Q GAIN WILD-TYPE     54     61     52
D8V5, multiclass
        clus
vv       4Q GAIN MUTATED 4Q GAIN WILD-TYPE
  CLUS_1               2                54
  CLUS_2               1                61
  CLUS_3               2                52
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q GAIN MUTATED        1      2      2
  4Q GAIN WILD-TYPE     17     78     72
D8V6, multiclass
        clus
vv       4Q GAIN MUTATED 4Q GAIN WILD-TYPE
  CLUS_1               1                17
  CLUS_2               2                78
  CLUS_3               2                72
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q GAIN MUTATED        1      1      3
  4Q GAIN WILD-TYPE     53     64     50
D8V7, multiclass
        clus
vv       4Q GAIN MUTATED 4Q GAIN WILD-TYPE
  CLUS_1               1                53
  CLUS_2               1                64
  CLUS_3               3                50
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q GAIN MUTATED        1      1      3
  4Q GAIN WILD-TYPE     13     86     68
D8V8, multiclass
        clus
vv       4Q GAIN MUTATED 4Q GAIN WILD-TYPE
  CLUS_1               1                13
  CLUS_2               1                86
  CLUS_3               3                68

Clustering(9) Variable = 5P GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5P GAIN MUTATED        2     11      1     12
  5P GAIN WILD-TYPE     31     57     36     22
D9V1, multiclass
        clus
vv       5P GAIN MUTATED 5P GAIN WILD-TYPE
  CLUS_1               2                31
  CLUS_2              11                57
  CLUS_3               1                36
  CLUS_4              12                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P GAIN MUTATED        8     12      3
  5P GAIN WILD-TYPE     35     31     67
D9V2, multiclass
        clus
vv       5P GAIN MUTATED 5P GAIN WILD-TYPE
  CLUS_1               8                35
  CLUS_2              12                31
  CLUS_3               3                67
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5P GAIN MUTATED       13      3      6      4
  5P GAIN WILD-TYPE     45     46     25     19
D9V3, multiclass
        clus
vv       5P GAIN MUTATED 5P GAIN WILD-TYPE
  CLUS_1              13                45
  CLUS_2               3                46
  CLUS_3               6                25
  CLUS_4               4                19
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P GAIN MUTATED        4     19      3
  5P GAIN WILD-TYPE     27     47     61
D9V4, multiclass
        clus
vv       5P GAIN MUTATED 5P GAIN WILD-TYPE
  CLUS_1               4                27
  CLUS_2              19                47
  CLUS_3               3                61
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P GAIN MUTATED       13      9      4
  5P GAIN WILD-TYPE     43     53     50
D9V5, multiclass
        clus
vv       5P GAIN MUTATED 5P GAIN WILD-TYPE
  CLUS_1              13                43
  CLUS_2               9                53
  CLUS_3               4                50
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P GAIN MUTATED        6     10     10
  5P GAIN WILD-TYPE     12     70     64
D9V6, multiclass
        clus
vv       5P GAIN MUTATED 5P GAIN WILD-TYPE
  CLUS_1               6                12
  CLUS_2              10                70
  CLUS_3              10                64
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P GAIN MUTATED       12      8      6
  5P GAIN WILD-TYPE     42     57     47
D9V7, multiclass
        clus
vv       5P GAIN MUTATED 5P GAIN WILD-TYPE
  CLUS_1              12                42
  CLUS_2               8                57
  CLUS_3               6                47
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P GAIN MUTATED        4     11     11
  5P GAIN WILD-TYPE     10     76     60
D9V8, multiclass
        clus
vv       5P GAIN MUTATED 5P GAIN WILD-TYPE
  CLUS_1               4                10
  CLUS_2              11                76
  CLUS_3              11                60

Clustering(10) Variable = 5Q GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5Q GAIN MUTATED        2     12      1     11
  5Q GAIN WILD-TYPE     31     56     36     23
D10V1, multiclass
        clus
vv       5Q GAIN MUTATED 5Q GAIN WILD-TYPE
  CLUS_1               2                31
  CLUS_2              12                56
  CLUS_3               1                36
  CLUS_4              11                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q GAIN MUTATED        8     11      4
  5Q GAIN WILD-TYPE     35     32     66
D10V2, multiclass
        clus
vv       5Q GAIN MUTATED 5Q GAIN WILD-TYPE
  CLUS_1               8                35
  CLUS_2              11                32
  CLUS_3               4                66
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5Q GAIN MUTATED       12      3      7      4
  5Q GAIN WILD-TYPE     46     46     24     19
D10V3, multiclass
        clus
vv       5Q GAIN MUTATED 5Q GAIN WILD-TYPE
  CLUS_1              12                46
  CLUS_2               3                46
  CLUS_3               7                24
  CLUS_4               4                19
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q GAIN MUTATED        4     19      3
  5Q GAIN WILD-TYPE     27     47     61
D10V4, multiclass
        clus
vv       5Q GAIN MUTATED 5Q GAIN WILD-TYPE
  CLUS_1               4                27
  CLUS_2              19                47
  CLUS_3               3                61
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q GAIN MUTATED       13      9      4
  5Q GAIN WILD-TYPE     43     53     50
D10V5, multiclass
        clus
vv       5Q GAIN MUTATED 5Q GAIN WILD-TYPE
  CLUS_1              13                43
  CLUS_2               9                53
  CLUS_3               4                50
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q GAIN MUTATED        5     11     10
  5Q GAIN WILD-TYPE     13     69     64
D10V6, multiclass
        clus
vv       5Q GAIN MUTATED 5Q GAIN WILD-TYPE
  CLUS_1               5                13
  CLUS_2              11                69
  CLUS_3              10                64
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q GAIN MUTATED       12      8      6
  5Q GAIN WILD-TYPE     42     57     47
D10V7, multiclass
        clus
vv       5Q GAIN MUTATED 5Q GAIN WILD-TYPE
  CLUS_1              12                42
  CLUS_2               8                57
  CLUS_3               6                47
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q GAIN MUTATED        4     12     10
  5Q GAIN WILD-TYPE     10     75     61
D10V8, multiclass
        clus
vv       5Q GAIN MUTATED 5Q GAIN WILD-TYPE
  CLUS_1               4                10
  CLUS_2              12                75
  CLUS_3              10                61

Clustering(11) Variable = 6P GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6P GAIN MUTATED        0      3      1      4
  6P GAIN WILD-TYPE     33     65     36     30
D11V1, multiclass
        clus
vv       6P GAIN MUTATED 6P GAIN WILD-TYPE
  CLUS_1               0                33
  CLUS_2               3                65
  CLUS_3               1                36
  CLUS_4               4                30
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P GAIN MUTATED        1      5      1
  6P GAIN WILD-TYPE     42     38     69
D11V2, multiclass
        clus
vv       6P GAIN MUTATED 6P GAIN WILD-TYPE
  CLUS_1               1                42
  CLUS_2               5                38
  CLUS_3               1                69
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6P GAIN MUTATED        7      1      0      0
  6P GAIN WILD-TYPE     51     48     31     23
D11V3, multiclass
        clus
vv       6P GAIN MUTATED 6P GAIN WILD-TYPE
  CLUS_1               7                51
  CLUS_2               1                48
  CLUS_3               0                31
  CLUS_4               0                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P GAIN MUTATED        2      5      1
  6P GAIN WILD-TYPE     29     61     63
D11V4, multiclass
        clus
vv       6P GAIN MUTATED 6P GAIN WILD-TYPE
  CLUS_1               2                29
  CLUS_2               5                61
  CLUS_3               1                63
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P GAIN MUTATED        0      6      2
  6P GAIN WILD-TYPE     56     56     52
D11V5, multiclass
        clus
vv       6P GAIN MUTATED 6P GAIN WILD-TYPE
  CLUS_1               0                56
  CLUS_2               6                56
  CLUS_3               2                52
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P GAIN MUTATED        1      1      6
  6P GAIN WILD-TYPE     17     79     68
D11V6, multiclass
        clus
vv       6P GAIN MUTATED 6P GAIN WILD-TYPE
  CLUS_1               1                17
  CLUS_2               1                79
  CLUS_3               6                68
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P GAIN MUTATED        0      7      1
  6P GAIN WILD-TYPE     54     58     52
D11V7, multiclass
        clus
vv       6P GAIN MUTATED 6P GAIN WILD-TYPE
  CLUS_1               0                54
  CLUS_2               7                58
  CLUS_3               1                52
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P GAIN MUTATED        1      2      5
  6P GAIN WILD-TYPE     13     85     66
D11V8, multiclass
        clus
vv       6P GAIN MUTATED 6P GAIN WILD-TYPE
  CLUS_1               1                13
  CLUS_2               2                85
  CLUS_3               5                66

Clustering(12) Variable = 6Q GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6Q GAIN MUTATED        0      1      1      4
  6Q GAIN WILD-TYPE     33     67     36     30
D12V1, multiclass
        clus
vv       6Q GAIN MUTATED 6Q GAIN WILD-TYPE
  CLUS_1               0                33
  CLUS_2               1                67
  CLUS_3               1                36
  CLUS_4               4                30
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q GAIN MUTATED        0      4      1
  6Q GAIN WILD-TYPE     43     39     69
D12V2, multiclass
        clus
vv       6Q GAIN MUTATED 6Q GAIN WILD-TYPE
  CLUS_1               0                43
  CLUS_2               4                39
  CLUS_3               1                69
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6Q GAIN MUTATED        5      1      0      0
  6Q GAIN WILD-TYPE     53     48     31     23
D12V3, multiclass
        clus
vv       6Q GAIN MUTATED 6Q GAIN WILD-TYPE
  CLUS_1               5                53
  CLUS_2               1                48
  CLUS_3               0                31
  CLUS_4               0                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q GAIN MUTATED        2      3      1
  6Q GAIN WILD-TYPE     29     63     63
D12V4, multiclass
        clus
vv       6Q GAIN MUTATED 6Q GAIN WILD-TYPE
  CLUS_1               2                29
  CLUS_2               3                63
  CLUS_3               1                63
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q GAIN MUTATED        0      4      2
  6Q GAIN WILD-TYPE     56     58     52
D12V5, multiclass
        clus
vv       6Q GAIN MUTATED 6Q GAIN WILD-TYPE
  CLUS_1               0                56
  CLUS_2               4                58
  CLUS_3               2                52
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q GAIN MUTATED        1      1      4
  6Q GAIN WILD-TYPE     17     79     70
D12V6, multiclass
        clus
vv       6Q GAIN MUTATED 6Q GAIN WILD-TYPE
  CLUS_1               1                17
  CLUS_2               1                79
  CLUS_3               4                70
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q GAIN MUTATED        0      5      1
  6Q GAIN WILD-TYPE     54     60     52
D12V7, multiclass
        clus
vv       6Q GAIN MUTATED 6Q GAIN WILD-TYPE
  CLUS_1               0                54
  CLUS_2               5                60
  CLUS_3               1                52
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q GAIN MUTATED        1      2      3
  6Q GAIN WILD-TYPE     13     85     68
D12V8, multiclass
        clus
vv       6Q GAIN MUTATED 6Q GAIN WILD-TYPE
  CLUS_1               1                13
  CLUS_2               2                85
  CLUS_3               3                68

Clustering(13) Variable = 7P GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  7P GAIN MUTATED       31     19     37     13
  7P GAIN WILD-TYPE      2     49      0     21
D13V1, multiclass
        clus
vv       7P GAIN MUTATED 7P GAIN WILD-TYPE
  CLUS_1              31                 2
  CLUS_2              19                49
  CLUS_3              37                 0
  CLUS_4              13                21
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7P GAIN MUTATED       20     13     57
  7P GAIN WILD-TYPE     23     30     13
D13V2, multiclass
        clus
vv       7P GAIN MUTATED 7P GAIN WILD-TYPE
  CLUS_1              20                23
  CLUS_2              13                30
  CLUS_3              57                13
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  7P GAIN MUTATED       14     44     15     20
  7P GAIN WILD-TYPE     44      5     16      3
D13V3, multiclass
        clus
vv       7P GAIN MUTATED 7P GAIN WILD-TYPE
  CLUS_1              14                44
  CLUS_2              44                 5
  CLUS_3              15                16
  CLUS_4              20                 3
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7P GAIN MUTATED        9     31     53
  7P GAIN WILD-TYPE     22     35     11
D13V4, multiclass
        clus
vv       7P GAIN MUTATED 7P GAIN WILD-TYPE
  CLUS_1               9                22
  CLUS_2              31                35
  CLUS_3              53                11
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7P GAIN MUTATED       27     36     37
  7P GAIN WILD-TYPE     29     26     17
D13V5, multiclass
        clus
vv       7P GAIN MUTATED 7P GAIN WILD-TYPE
  CLUS_1              27                29
  CLUS_2              36                26
  CLUS_3              37                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7P GAIN MUTATED        3     55     42
  7P GAIN WILD-TYPE     15     25     32
D13V6, multiclass
        clus
vv       7P GAIN MUTATED 7P GAIN WILD-TYPE
  CLUS_1               3                15
  CLUS_2              55                25
  CLUS_3              42                32
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7P GAIN MUTATED       27     37     36
  7P GAIN WILD-TYPE     27     28     17
D13V7, multiclass
        clus
vv       7P GAIN MUTATED 7P GAIN WILD-TYPE
  CLUS_1              27                27
  CLUS_2              37                28
  CLUS_3              36                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7P GAIN MUTATED        3     56     41
  7P GAIN WILD-TYPE     11     31     30
D13V8, multiclass
        clus
vv       7P GAIN MUTATED 7P GAIN WILD-TYPE
  CLUS_1               3                11
  CLUS_2              56                31
  CLUS_3              41                30

Clustering(14) Variable = 7Q GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  7Q GAIN MUTATED       31     20     37     13
  7Q GAIN WILD-TYPE      2     48      0     21
D14V1, multiclass
        clus
vv       7Q GAIN MUTATED 7Q GAIN WILD-TYPE
  CLUS_1              31                 2
  CLUS_2              20                48
  CLUS_3              37                 0
  CLUS_4              13                21
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7Q GAIN MUTATED       20     14     57
  7Q GAIN WILD-TYPE     23     29     13
D14V2, multiclass
        clus
vv       7Q GAIN MUTATED 7Q GAIN WILD-TYPE
  CLUS_1              20                23
  CLUS_2              14                29
  CLUS_3              57                13
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  7Q GAIN MUTATED       14     44     16     20
  7Q GAIN WILD-TYPE     44      5     15      3
D14V3, multiclass
        clus
vv       7Q GAIN MUTATED 7Q GAIN WILD-TYPE
  CLUS_1              14                44
  CLUS_2              44                 5
  CLUS_3              16                15
  CLUS_4              20                 3
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7Q GAIN MUTATED        9     32     53
  7Q GAIN WILD-TYPE     22     34     11
D14V4, multiclass
        clus
vv       7Q GAIN MUTATED 7Q GAIN WILD-TYPE
  CLUS_1               9                22
  CLUS_2              32                34
  CLUS_3              53                11
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7Q GAIN MUTATED       28     36     37
  7Q GAIN WILD-TYPE     28     26     17
D14V5, multiclass
        clus
vv       7Q GAIN MUTATED 7Q GAIN WILD-TYPE
  CLUS_1              28                28
  CLUS_2              36                26
  CLUS_3              37                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7Q GAIN MUTATED        4     55     42
  7Q GAIN WILD-TYPE     14     25     32
D14V6, multiclass
        clus
vv       7Q GAIN MUTATED 7Q GAIN WILD-TYPE
  CLUS_1               4                14
  CLUS_2              55                25
  CLUS_3              42                32
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7Q GAIN MUTATED       28     37     36
  7Q GAIN WILD-TYPE     26     28     17
D14V7, multiclass
        clus
vv       7Q GAIN MUTATED 7Q GAIN WILD-TYPE
  CLUS_1              28                26
  CLUS_2              37                28
  CLUS_3              36                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7Q GAIN MUTATED        4     56     41
  7Q GAIN WILD-TYPE     10     31     30
D14V8, multiclass
        clus
vv       7Q GAIN MUTATED 7Q GAIN WILD-TYPE
  CLUS_1               4                10
  CLUS_2              56                31
  CLUS_3              41                30

Clustering(15) Variable = 8P GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8P GAIN MUTATED        2      8      0      2
  8P GAIN WILD-TYPE     31     60     37     32
D15V1, multiclass
        clus
vv       8P GAIN MUTATED 8P GAIN WILD-TYPE
  CLUS_1               2                31
  CLUS_2               8                60
  CLUS_3               0                37
  CLUS_4               2                32
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P GAIN MUTATED        2      8      1
  8P GAIN WILD-TYPE     41     35     69
D15V2, multiclass
        clus
vv       8P GAIN MUTATED 8P GAIN WILD-TYPE
  CLUS_1               2                41
  CLUS_2               8                35
  CLUS_3               1                69
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8P GAIN MUTATED        8      3      1      0
  8P GAIN WILD-TYPE     50     46     30     23
D15V3, multiclass
        clus
vv       8P GAIN MUTATED 8P GAIN WILD-TYPE
  CLUS_1               8                50
  CLUS_2               3                46
  CLUS_3               1                30
  CLUS_4               0                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P GAIN MUTATED        3      5      4
  8P GAIN WILD-TYPE     28     61     60
D15V4, multiclass
        clus
vv       8P GAIN MUTATED 8P GAIN WILD-TYPE
  CLUS_1               3                28
  CLUS_2               5                61
  CLUS_3               4                60
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P GAIN MUTATED        1      7      4
  8P GAIN WILD-TYPE     55     55     50
D15V5, multiclass
        clus
vv       8P GAIN MUTATED 8P GAIN WILD-TYPE
  CLUS_1               1                55
  CLUS_2               7                55
  CLUS_3               4                50
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P GAIN MUTATED        1      2      9
  8P GAIN WILD-TYPE     17     78     65
D15V6, multiclass
        clus
vv       8P GAIN MUTATED 8P GAIN WILD-TYPE
  CLUS_1               1                17
  CLUS_2               2                78
  CLUS_3               9                65
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P GAIN MUTATED        2      7      3
  8P GAIN WILD-TYPE     52     58     50
D15V7, multiclass
        clus
vv       8P GAIN MUTATED 8P GAIN WILD-TYPE
  CLUS_1               2                52
  CLUS_2               7                58
  CLUS_3               3                50
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P GAIN MUTATED        1      2      9
  8P GAIN WILD-TYPE     13     85     62
D15V8, multiclass
        clus
vv       8P GAIN MUTATED 8P GAIN WILD-TYPE
  CLUS_1               1                13
  CLUS_2               2                85
  CLUS_3               9                62

Clustering(16) Variable = 8Q GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8Q GAIN MUTATED        2      7      0      6
  8Q GAIN WILD-TYPE     31     61     37     28
D16V1, multiclass
        clus
vv       8Q GAIN MUTATED 8Q GAIN WILD-TYPE
  CLUS_1               2                31
  CLUS_2               7                61
  CLUS_3               0                37
  CLUS_4               6                28
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q GAIN MUTATED        1     11      1
  8Q GAIN WILD-TYPE     42     32     69
D16V2, multiclass
        clus
vv       8Q GAIN MUTATED 8Q GAIN WILD-TYPE
  CLUS_1               1                42
  CLUS_2              11                32
  CLUS_3               1                69
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8Q GAIN MUTATED       12      2      1      0
  8Q GAIN WILD-TYPE     46     47     30     23
D16V3, multiclass
        clus
vv       8Q GAIN MUTATED 8Q GAIN WILD-TYPE
  CLUS_1              12                46
  CLUS_2               2                47
  CLUS_3               1                30
  CLUS_4               0                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q GAIN MUTATED        4      8      3
  8Q GAIN WILD-TYPE     27     58     61
D16V4, multiclass
        clus
vv       8Q GAIN MUTATED 8Q GAIN WILD-TYPE
  CLUS_1               4                27
  CLUS_2               8                58
  CLUS_3               3                61
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q GAIN MUTATED        1     11      3
  8Q GAIN WILD-TYPE     55     51     51
D16V5, multiclass
        clus
vv       8Q GAIN MUTATED 8Q GAIN WILD-TYPE
  CLUS_1               1                55
  CLUS_2              11                51
  CLUS_3               3                51
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q GAIN MUTATED        2      2     11
  8Q GAIN WILD-TYPE     16     78     63
D16V6, multiclass
        clus
vv       8Q GAIN MUTATED 8Q GAIN WILD-TYPE
  CLUS_1               2                16
  CLUS_2               2                78
  CLUS_3              11                63
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q GAIN MUTATED        2     10      3
  8Q GAIN WILD-TYPE     52     55     50
D16V7, multiclass
        clus
vv       8Q GAIN MUTATED 8Q GAIN WILD-TYPE
  CLUS_1               2                52
  CLUS_2              10                55
  CLUS_3               3                50
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q GAIN MUTATED        2      2     11
  8Q GAIN WILD-TYPE     12     85     60
D16V8, multiclass
        clus
vv       8Q GAIN MUTATED 8Q GAIN WILD-TYPE
  CLUS_1               2                12
  CLUS_2               2                85
  CLUS_3              11                60

Clustering(17) Variable = 9P GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  9P GAIN MUTATED        0      2      0      1
  9P GAIN WILD-TYPE     33     66     37     33
D17V1, multiclass
        clus
vv       9P GAIN MUTATED 9P GAIN WILD-TYPE
  CLUS_1               0                33
  CLUS_2               2                66
  CLUS_3               0                37
  CLUS_4               1                33
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P GAIN MUTATED        0      2      0
  9P GAIN WILD-TYPE     43     41     70
D17V2, multiclass
[1] "Remove cluster labels:" "9P GAIN MUTATED"       
clus
  9P GAIN MUTATED 9P GAIN WILD-TYPE 
                2               154 
       TCGA-A4-7286        TCGA-A4-7287        TCGA-A4-7288        TCGA-A4-7583 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-A4-7584        TCGA-A4-7585        TCGA-A4-7732        TCGA-A4-7734 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-A4-7828        TCGA-A4-7915        TCGA-A4-7996        TCGA-A4-7997 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-A4-8098        TCGA-A4-8310        TCGA-A4-8311        TCGA-A4-8312 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-A4-8515        TCGA-A4-8516        TCGA-A4-8517        TCGA-A4-8518 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-A4-8630        TCGA-A4-A48D        TCGA-A4-A4ZT        TCGA-A4-A57E 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-A4-A5DU        TCGA-A4-A5XZ        TCGA-A4-A5Y0        TCGA-A4-A5Y1 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-A4-A6HP        TCGA-AL-7173        TCGA-AL-A5DJ        TCGA-AT-A5NU 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-B1-5398        TCGA-B1-7332        TCGA-B1-A47M        TCGA-B1-A47N 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-B1-A47O        TCGA-B1-A654        TCGA-B1-A655        TCGA-B1-A656 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-B1-A657        TCGA-B3-8121        TCGA-B9-5155        TCGA-B9-5156 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-B9-7268        TCGA-B9-A44B        TCGA-B9-A5W7        TCGA-B9-A5W8 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-B9-A5W9        TCGA-B9-A69E        TCGA-BQ-5875        TCGA-BQ-5876 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-BQ-5877        TCGA-BQ-5878        TCGA-BQ-5879        TCGA-BQ-5880 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-BQ-5881        TCGA-BQ-5882        TCGA-BQ-5883        TCGA-BQ-5884 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-BQ-5885        TCGA-BQ-5886        TCGA-BQ-5887        TCGA-BQ-5888 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-BQ-5889        TCGA-BQ-5890        TCGA-BQ-5891        TCGA-BQ-5892 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-BQ-5893        TCGA-BQ-5894        TCGA-BQ-7044        TCGA-BQ-7045 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-BQ-7046        TCGA-BQ-7048        TCGA-BQ-7049        TCGA-BQ-7050 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-BQ-7051        TCGA-BQ-7053        TCGA-BQ-7055        TCGA-BQ-7056 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-BQ-7059        TCGA-BQ-7060        TCGA-BQ-7061        TCGA-BQ-7062 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-DW-5560        TCGA-DW-5561        TCGA-DW-7834        TCGA-DW-7836 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-DW-7837        TCGA-DW-7838        TCGA-DW-7839        TCGA-DW-7840 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-DW-7841        TCGA-DW-7842        TCGA-DW-7963        TCGA-DZ-6131 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-DZ-6132        TCGA-DZ-6133        TCGA-DZ-6134        TCGA-DZ-6135 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-EV-5901        TCGA-EV-5902        TCGA-EV-5903        TCGA-F9-A4JJ 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-G7-6789        TCGA-G7-6790        TCGA-G7-6792        TCGA-G7-6793 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-G7-6795        TCGA-G7-6796        TCGA-G7-6797        TCGA-G7-7501 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-G7-7502        TCGA-G7-A4TM        TCGA-GL-6846        TCGA-GL-7773 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-GL-8500        TCGA-GL-A4EM        TCGA-GL-A59R        TCGA-GL-A59T 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-HE-7128        TCGA-HE-7129        TCGA-HE-7130        TCGA-HE-A5NF 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-HE-A5NH        TCGA-HE-A5NI        TCGA-HE-A5NJ        TCGA-HE-A5NK 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-HE-A5NL        TCGA-IA-A40U        TCGA-IA-A40X        TCGA-IA-A40Y 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-IZ-8195        TCGA-IZ-8196        TCGA-IZ-A6M8        TCGA-IZ-A6M9 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-J7-6720        TCGA-J7-8537        TCGA-KV-A6GD        TCGA-KV-A6GE 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-MH-A55W        TCGA-MH-A55Z        TCGA-MH-A560        TCGA-MH-A561 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-MH-A562        TCGA-P4-A5E6        TCGA-P4-A5E7        TCGA-P4-A5E8 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-P4-A5EA        TCGA-P4-A5EB        TCGA-P4-A5ED        TCGA-PJ-A5Z8 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-PJ-A5Z9        TCGA-Q2-A5QZ 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  9P GAIN MUTATED        3      0      0      0
  9P GAIN WILD-TYPE     55     49     31     23
D17V3, multiclass
        clus
vv       9P GAIN MUTATED 9P GAIN WILD-TYPE
  CLUS_1               3                55
  CLUS_2               0                49
  CLUS_3               0                31
  CLUS_4               0                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P GAIN MUTATED        2      1      0
  9P GAIN WILD-TYPE     29     65     64
D17V4, multiclass
        clus
vv       9P GAIN MUTATED 9P GAIN WILD-TYPE
  CLUS_1               2                29
  CLUS_2               1                65
  CLUS_3               0                64
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P GAIN MUTATED        1      2      0
  9P GAIN WILD-TYPE     55     60     54
D17V5, multiclass
        clus
vv       9P GAIN MUTATED 9P GAIN WILD-TYPE
  CLUS_1               1                55
  CLUS_2               2                60
  CLUS_3               0                54
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P GAIN MUTATED        1      0      2
  9P GAIN WILD-TYPE     17     80     72
D17V6, multiclass
        clus
vv       9P GAIN MUTATED 9P GAIN WILD-TYPE
  CLUS_1               1                17
  CLUS_2               0                80
  CLUS_3               2                72
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P GAIN MUTATED        1      2      0
  9P GAIN WILD-TYPE     53     63     53
D17V7, multiclass
        clus
vv       9P GAIN MUTATED 9P GAIN WILD-TYPE
  CLUS_1               1                53
  CLUS_2               2                63
  CLUS_3               0                53
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P GAIN MUTATED        1      0      2
  9P GAIN WILD-TYPE     13     87     69
D17V8, multiclass
        clus
vv       9P GAIN MUTATED 9P GAIN WILD-TYPE
  CLUS_1               1                13
  CLUS_2               0                87
  CLUS_3               2                69

Clustering(18) Variable = 10P GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10P GAIN MUTATED        1      0      1      3
  10P GAIN WILD-TYPE     32     68     36     31
D18V1, multiclass
        clus
vv       10P GAIN MUTATED 10P GAIN WILD-TYPE
  CLUS_1                1                 32
  CLUS_2                0                 68
  CLUS_3                1                 36
  CLUS_4                3                 31
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P GAIN MUTATED        0      3      0
  10P GAIN WILD-TYPE     43     40     70
D18V2, multiclass
        clus
vv       10P GAIN MUTATED 10P GAIN WILD-TYPE
  CLUS_1                0                 43
  CLUS_2                3                 40
  CLUS_3                0                 70
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10P GAIN MUTATED        3      2      0      0
  10P GAIN WILD-TYPE     55     47     31     23
D18V3, multiclass
        clus
vv       10P GAIN MUTATED 10P GAIN WILD-TYPE
  CLUS_1                3                 55
  CLUS_2                2                 47
  CLUS_3                0                 31
  CLUS_4                0                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P GAIN MUTATED        1      2      2
  10P GAIN WILD-TYPE     30     64     62
D18V4, multiclass
        clus
vv       10P GAIN MUTATED 10P GAIN WILD-TYPE
  CLUS_1                1                 30
  CLUS_2                2                 64
  CLUS_3                2                 62
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P GAIN MUTATED        2      0      3
  10P GAIN WILD-TYPE     54     62     51
D18V5, multiclass
        clus
vv       10P GAIN MUTATED 10P GAIN WILD-TYPE
  CLUS_1                2                 54
  CLUS_2                0                 62
  CLUS_3                3                 51
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P GAIN MUTATED        1      3      1
  10P GAIN WILD-TYPE     17     77     73
D18V6, multiclass
        clus
vv       10P GAIN MUTATED 10P GAIN WILD-TYPE
  CLUS_1                1                 17
  CLUS_2                3                 77
  CLUS_3                1                 73
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P GAIN MUTATED        3      0      2
  10P GAIN WILD-TYPE     51     65     51
D18V7, multiclass
        clus
vv       10P GAIN MUTATED 10P GAIN WILD-TYPE
  CLUS_1                3                 51
  CLUS_2                0                 65
  CLUS_3                2                 51
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P GAIN MUTATED        1      3      1
  10P GAIN WILD-TYPE     13     84     70
D18V8, multiclass
        clus
vv       10P GAIN MUTATED 10P GAIN WILD-TYPE
  CLUS_1                1                 13
  CLUS_2                3                 84
  CLUS_3                1                 70

Clustering(19) Variable = 10Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10Q GAIN MUTATED        1      0      1      3
  10Q GAIN WILD-TYPE     32     68     36     31
D19V1, multiclass
        clus
vv       10Q GAIN MUTATED 10Q GAIN WILD-TYPE
  CLUS_1                1                 32
  CLUS_2                0                 68
  CLUS_3                1                 36
  CLUS_4                3                 31
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q GAIN MUTATED        0      3      0
  10Q GAIN WILD-TYPE     43     40     70
D19V2, multiclass
        clus
vv       10Q GAIN MUTATED 10Q GAIN WILD-TYPE
  CLUS_1                0                 43
  CLUS_2                3                 40
  CLUS_3                0                 70
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10Q GAIN MUTATED        3      2      0      0
  10Q GAIN WILD-TYPE     55     47     31     23
D19V3, multiclass
        clus
vv       10Q GAIN MUTATED 10Q GAIN WILD-TYPE
  CLUS_1                3                 55
  CLUS_2                2                 47
  CLUS_3                0                 31
  CLUS_4                0                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q GAIN MUTATED        1      2      2
  10Q GAIN WILD-TYPE     30     64     62
D19V4, multiclass
        clus
vv       10Q GAIN MUTATED 10Q GAIN WILD-TYPE
  CLUS_1                1                 30
  CLUS_2                2                 64
  CLUS_3                2                 62
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q GAIN MUTATED        2      0      3
  10Q GAIN WILD-TYPE     54     62     51
D19V5, multiclass
        clus
vv       10Q GAIN MUTATED 10Q GAIN WILD-TYPE
  CLUS_1                2                 54
  CLUS_2                0                 62
  CLUS_3                3                 51
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q GAIN MUTATED        1      3      1
  10Q GAIN WILD-TYPE     17     77     73
D19V6, multiclass
        clus
vv       10Q GAIN MUTATED 10Q GAIN WILD-TYPE
  CLUS_1                1                 17
  CLUS_2                3                 77
  CLUS_3                1                 73
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q GAIN MUTATED        3      0      2
  10Q GAIN WILD-TYPE     51     65     51
D19V7, multiclass
        clus
vv       10Q GAIN MUTATED 10Q GAIN WILD-TYPE
  CLUS_1                3                 51
  CLUS_2                0                 65
  CLUS_3                2                 51
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q GAIN MUTATED        1      3      1
  10Q GAIN WILD-TYPE     13     84     70
D19V8, multiclass
        clus
vv       10Q GAIN MUTATED 10Q GAIN WILD-TYPE
  CLUS_1                1                 13
  CLUS_2                3                 84
  CLUS_3                1                 70

Clustering(20) Variable = 11P GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11P GAIN MUTATED        0      3      0      5
  11P GAIN WILD-TYPE     33     65     37     29
D20V1, multiclass
        clus
vv       11P GAIN MUTATED 11P GAIN WILD-TYPE
  CLUS_1                0                 33
  CLUS_2                3                 65
  CLUS_3                0                 37
  CLUS_4                5                 29
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P GAIN MUTATED        1      6      0
  11P GAIN WILD-TYPE     42     37     70
D20V2, multiclass
        clus
vv       11P GAIN MUTATED 11P GAIN WILD-TYPE
  CLUS_1                1                 42
  CLUS_2                6                 37
  CLUS_3                0                 70
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11P GAIN MUTATED        4      1      2      1
  11P GAIN WILD-TYPE     54     48     29     22
D20V3, multiclass
        clus
vv       11P GAIN MUTATED 11P GAIN WILD-TYPE
  CLUS_1                4                 54
  CLUS_2                1                 48
  CLUS_3                2                 29
  CLUS_4                1                 22
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P GAIN MUTATED        4      4      0
  11P GAIN WILD-TYPE     27     62     64
D20V4, multiclass
        clus
vv       11P GAIN MUTATED 11P GAIN WILD-TYPE
  CLUS_1                4                 27
  CLUS_2                4                 62
  CLUS_3                0                 64
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P GAIN MUTATED        5      3      0
  11P GAIN WILD-TYPE     51     59     54
D20V5, multiclass
        clus
vv       11P GAIN MUTATED 11P GAIN WILD-TYPE
  CLUS_1                5                 51
  CLUS_2                3                 59
  CLUS_3                0                 54
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P GAIN MUTATED        2      3      3
  11P GAIN WILD-TYPE     16     77     71
D20V6, multiclass
        clus
vv       11P GAIN MUTATED 11P GAIN WILD-TYPE
  CLUS_1                2                 16
  CLUS_2                3                 77
  CLUS_3                3                 71
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P GAIN MUTATED        3      3      2
  11P GAIN WILD-TYPE     51     62     51
D20V7, multiclass
        clus
vv       11P GAIN MUTATED 11P GAIN WILD-TYPE
  CLUS_1                3                 51
  CLUS_2                3                 62
  CLUS_3                2                 51
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P GAIN MUTATED        2      3      3
  11P GAIN WILD-TYPE     12     84     68
D20V8, multiclass
        clus
vv       11P GAIN MUTATED 11P GAIN WILD-TYPE
  CLUS_1                2                 12
  CLUS_2                3                 84
  CLUS_3                3                 68

Clustering(21) Variable = 11Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11Q GAIN MUTATED        0      2      0      5
  11Q GAIN WILD-TYPE     33     66     37     29
D21V1, multiclass
        clus
vv       11Q GAIN MUTATED 11Q GAIN WILD-TYPE
  CLUS_1                0                 33
  CLUS_2                2                 66
  CLUS_3                0                 37
  CLUS_4                5                 29
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q GAIN MUTATED        0      6      0
  11Q GAIN WILD-TYPE     43     37     70
D21V2, multiclass
        clus
vv       11Q GAIN MUTATED 11Q GAIN WILD-TYPE
  CLUS_1                0                 43
  CLUS_2                6                 37
  CLUS_3                0                 70
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11Q GAIN MUTATED        4      1      2      0
  11Q GAIN WILD-TYPE     54     48     29     23
D21V3, multiclass
        clus
vv       11Q GAIN MUTATED 11Q GAIN WILD-TYPE
  CLUS_1                4                 54
  CLUS_2                1                 48
  CLUS_3                2                 29
  CLUS_4                0                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q GAIN MUTATED        3      4      0
  11Q GAIN WILD-TYPE     28     62     64
D21V4, multiclass
        clus
vv       11Q GAIN MUTATED 11Q GAIN WILD-TYPE
  CLUS_1                3                 28
  CLUS_2                4                 62
  CLUS_3                0                 64
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q GAIN MUTATED        4      3      0
  11Q GAIN WILD-TYPE     52     59     54
D21V5, multiclass
        clus
vv       11Q GAIN MUTATED 11Q GAIN WILD-TYPE
  CLUS_1                4                 52
  CLUS_2                3                 59
  CLUS_3                0                 54
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q GAIN MUTATED        1      3      3
  11Q GAIN WILD-TYPE     17     77     71
D21V6, multiclass
        clus
vv       11Q GAIN MUTATED 11Q GAIN WILD-TYPE
  CLUS_1                1                 17
  CLUS_2                3                 77
  CLUS_3                3                 71
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q GAIN MUTATED        2      3      2
  11Q GAIN WILD-TYPE     52     62     51
D21V7, multiclass
        clus
vv       11Q GAIN MUTATED 11Q GAIN WILD-TYPE
  CLUS_1                2                 52
  CLUS_2                3                 62
  CLUS_3                2                 51
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q GAIN MUTATED        1      3      3
  11Q GAIN WILD-TYPE     13     84     68
D21V8, multiclass
        clus
vv       11Q GAIN MUTATED 11Q GAIN WILD-TYPE
  CLUS_1                1                 13
  CLUS_2                3                 84
  CLUS_3                3                 68

Clustering(22) Variable = 12P GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  12P GAIN MUTATED       21     16     20     11
  12P GAIN WILD-TYPE     12     52     17     23
D22V1, multiclass
        clus
vv       12P GAIN MUTATED 12P GAIN WILD-TYPE
  CLUS_1               21                 12
  CLUS_2               16                 52
  CLUS_3               20                 17
  CLUS_4               11                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12P GAIN MUTATED       17     14     31
  12P GAIN WILD-TYPE     26     29     39
D22V2, multiclass
        clus
vv       12P GAIN MUTATED 12P GAIN WILD-TYPE
  CLUS_1               17                 26
  CLUS_2               14                 29
  CLUS_3               31                 39
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  12P GAIN MUTATED       14     26     12     11
  12P GAIN WILD-TYPE     44     23     19     12
D22V3, multiclass
        clus
vv       12P GAIN MUTATED 12P GAIN WILD-TYPE
  CLUS_1               14                 44
  CLUS_2               26                 23
  CLUS_3               12                 19
  CLUS_4               11                 12
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12P GAIN MUTATED        9     23     31
  12P GAIN WILD-TYPE     22     43     33
D22V4, multiclass
        clus
vv       12P GAIN MUTATED 12P GAIN WILD-TYPE
  CLUS_1                9                 22
  CLUS_2               23                 43
  CLUS_3               31                 33
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12P GAIN MUTATED       23     20     25
  12P GAIN WILD-TYPE     33     42     29
D22V5, multiclass
        clus
vv       12P GAIN MUTATED 12P GAIN WILD-TYPE
  CLUS_1               23                 33
  CLUS_2               20                 42
  CLUS_3               25                 29
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12P GAIN MUTATED        6     39     23
  12P GAIN WILD-TYPE     12     41     51
D22V6, multiclass
        clus
vv       12P GAIN MUTATED 12P GAIN WILD-TYPE
  CLUS_1                6                 12
  CLUS_2               39                 41
  CLUS_3               23                 51
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12P GAIN MUTATED       19     21     28
  12P GAIN WILD-TYPE     35     44     25
D22V7, multiclass
        clus
vv       12P GAIN MUTATED 12P GAIN WILD-TYPE
  CLUS_1               19                 35
  CLUS_2               21                 44
  CLUS_3               28                 25
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12P GAIN MUTATED        5     40     23
  12P GAIN WILD-TYPE      9     47     48
D22V8, multiclass
        clus
vv       12P GAIN MUTATED 12P GAIN WILD-TYPE
  CLUS_1                5                  9
  CLUS_2               40                 47
  CLUS_3               23                 48

Clustering(23) Variable = 12Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  12Q GAIN MUTATED       21     16     20     11
  12Q GAIN WILD-TYPE     12     52     17     23
D23V1, multiclass
        clus
vv       12Q GAIN MUTATED 12Q GAIN WILD-TYPE
  CLUS_1               21                 12
  CLUS_2               16                 52
  CLUS_3               20                 17
  CLUS_4               11                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12Q GAIN MUTATED       17     14     31
  12Q GAIN WILD-TYPE     26     29     39
D23V2, multiclass
        clus
vv       12Q GAIN MUTATED 12Q GAIN WILD-TYPE
  CLUS_1               17                 26
  CLUS_2               14                 29
  CLUS_3               31                 39
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  12Q GAIN MUTATED       14     26     12     11
  12Q GAIN WILD-TYPE     44     23     19     12
D23V3, multiclass
        clus
vv       12Q GAIN MUTATED 12Q GAIN WILD-TYPE
  CLUS_1               14                 44
  CLUS_2               26                 23
  CLUS_3               12                 19
  CLUS_4               11                 12
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12Q GAIN MUTATED        9     23     31
  12Q GAIN WILD-TYPE     22     43     33
D23V4, multiclass
        clus
vv       12Q GAIN MUTATED 12Q GAIN WILD-TYPE
  CLUS_1                9                 22
  CLUS_2               23                 43
  CLUS_3               31                 33
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12Q GAIN MUTATED       23     20     25
  12Q GAIN WILD-TYPE     33     42     29
D23V5, multiclass
        clus
vv       12Q GAIN MUTATED 12Q GAIN WILD-TYPE
  CLUS_1               23                 33
  CLUS_2               20                 42
  CLUS_3               25                 29
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12Q GAIN MUTATED        6     39     23
  12Q GAIN WILD-TYPE     12     41     51
D23V6, multiclass
        clus
vv       12Q GAIN MUTATED 12Q GAIN WILD-TYPE
  CLUS_1                6                 12
  CLUS_2               39                 41
  CLUS_3               23                 51
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12Q GAIN MUTATED       19     21     28
  12Q GAIN WILD-TYPE     35     44     25
D23V7, multiclass
        clus
vv       12Q GAIN MUTATED 12Q GAIN WILD-TYPE
  CLUS_1               19                 35
  CLUS_2               21                 44
  CLUS_3               28                 25
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12Q GAIN MUTATED        5     40     23
  12Q GAIN WILD-TYPE      9     47     48
D23V8, multiclass
        clus
vv       12Q GAIN MUTATED 12Q GAIN WILD-TYPE
  CLUS_1                5                  9
  CLUS_2               40                 47
  CLUS_3               23                 48

Clustering(24) Variable = 13Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  13Q GAIN MUTATED        7      4      2      6
  13Q GAIN WILD-TYPE     26     64     35     28
D24V1, multiclass
        clus
vv       13Q GAIN MUTATED 13Q GAIN WILD-TYPE
  CLUS_1                7                 26
  CLUS_2                4                 64
  CLUS_3                2                 35
  CLUS_4                6                 28
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q GAIN MUTATED        5      4      8
  13Q GAIN WILD-TYPE     38     39     62
D24V2, multiclass
        clus
vv       13Q GAIN MUTATED 13Q GAIN WILD-TYPE
  CLUS_1                5                 38
  CLUS_2                4                 39
  CLUS_3                8                 62
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  13Q GAIN MUTATED        4      7      6      2
  13Q GAIN WILD-TYPE     54     42     25     21
D24V3, multiclass
        clus
vv       13Q GAIN MUTATED 13Q GAIN WILD-TYPE
  CLUS_1                4                 54
  CLUS_2                7                 42
  CLUS_3                6                 25
  CLUS_4                2                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q GAIN MUTATED        5      7      7
  13Q GAIN WILD-TYPE     26     59     57
D24V4, multiclass
        clus
vv       13Q GAIN MUTATED 13Q GAIN WILD-TYPE
  CLUS_1                5                 26
  CLUS_2                7                 59
  CLUS_3                7                 57
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q GAIN MUTATED        6      7      6
  13Q GAIN WILD-TYPE     50     55     48
D24V5, multiclass
        clus
vv       13Q GAIN MUTATED 13Q GAIN WILD-TYPE
  CLUS_1                6                 50
  CLUS_2                7                 55
  CLUS_3                6                 48
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q GAIN MUTATED        2      9      8
  13Q GAIN WILD-TYPE     16     71     66
D24V6, multiclass
        clus
vv       13Q GAIN MUTATED 13Q GAIN WILD-TYPE
  CLUS_1                2                 16
  CLUS_2                9                 71
  CLUS_3                8                 66
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q GAIN MUTATED        6      8      5
  13Q GAIN WILD-TYPE     48     57     48
D24V7, multiclass
        clus
vv       13Q GAIN MUTATED 13Q GAIN WILD-TYPE
  CLUS_1                6                 48
  CLUS_2                8                 57
  CLUS_3                5                 48
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q GAIN MUTATED        1     10      8
  13Q GAIN WILD-TYPE     13     77     63
D24V8, multiclass
        clus
vv       13Q GAIN MUTATED 13Q GAIN WILD-TYPE
  CLUS_1                1                 13
  CLUS_2               10                 77
  CLUS_3                8                 63

Clustering(25) Variable = 14Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  14Q GAIN MUTATED        0      1      0      2
  14Q GAIN WILD-TYPE     33     67     37     32
D25V1, multiclass
        clus
vv       14Q GAIN MUTATED 14Q GAIN WILD-TYPE
  CLUS_1                0                 33
  CLUS_2                1                 67
  CLUS_3                0                 37
  CLUS_4                2                 32
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q GAIN MUTATED        0      3      0
  14Q GAIN WILD-TYPE     43     40     70
D25V2, multiclass
        clus
vv       14Q GAIN MUTATED 14Q GAIN WILD-TYPE
  CLUS_1                0                 43
  CLUS_2                3                 40
  CLUS_3                0                 70
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  14Q GAIN MUTATED        2      0      1      0
  14Q GAIN WILD-TYPE     56     49     30     23
D25V3, multiclass
        clus
vv       14Q GAIN MUTATED 14Q GAIN WILD-TYPE
  CLUS_1                2                 56
  CLUS_2                0                 49
  CLUS_3                1                 30
  CLUS_4                0                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q GAIN MUTATED        2      1      0
  14Q GAIN WILD-TYPE     29     65     64
D25V4, multiclass
        clus
vv       14Q GAIN MUTATED 14Q GAIN WILD-TYPE
  CLUS_1                2                 29
  CLUS_2                1                 65
  CLUS_3                0                 64
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q GAIN MUTATED        1      1      1
  14Q GAIN WILD-TYPE     55     61     53
D25V5, multiclass
        clus
vv       14Q GAIN MUTATED 14Q GAIN WILD-TYPE
  CLUS_1                1                 55
  CLUS_2                1                 61
  CLUS_3                1                 53
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q GAIN MUTATED        1      0      2
  14Q GAIN WILD-TYPE     17     80     72
D25V6, multiclass
        clus
vv       14Q GAIN MUTATED 14Q GAIN WILD-TYPE
  CLUS_1                1                 17
  CLUS_2                0                 80
  CLUS_3                2                 72
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q GAIN MUTATED        1      1      1
  14Q GAIN WILD-TYPE     53     64     52
D25V7, multiclass
        clus
vv       14Q GAIN MUTATED 14Q GAIN WILD-TYPE
  CLUS_1                1                 53
  CLUS_2                1                 64
  CLUS_3                1                 52
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q GAIN MUTATED        1      0      2
  14Q GAIN WILD-TYPE     13     87     69
D25V8, multiclass
        clus
vv       14Q GAIN MUTATED 14Q GAIN WILD-TYPE
  CLUS_1                1                 13
  CLUS_2                0                 87
  CLUS_3                2                 69

Clustering(26) Variable = 15Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  15Q GAIN MUTATED        0      1      0      4
  15Q GAIN WILD-TYPE     33     67     37     30
D26V1, multiclass
        clus
vv       15Q GAIN MUTATED 15Q GAIN WILD-TYPE
  CLUS_1                0                 33
  CLUS_2                1                 67
  CLUS_3                0                 37
  CLUS_4                4                 30
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q GAIN MUTATED        0      4      1
  15Q GAIN WILD-TYPE     43     39     69
D26V2, multiclass
        clus
vv       15Q GAIN MUTATED 15Q GAIN WILD-TYPE
  CLUS_1                0                 43
  CLUS_2                4                 39
  CLUS_3                1                 69
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  15Q GAIN MUTATED        2      0      2      0
  15Q GAIN WILD-TYPE     56     49     29     23
D26V3, multiclass
        clus
vv       15Q GAIN MUTATED 15Q GAIN WILD-TYPE
  CLUS_1                2                 56
  CLUS_2                0                 49
  CLUS_3                2                 29
  CLUS_4                0                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q GAIN MUTATED        0      4      0
  15Q GAIN WILD-TYPE     31     62     64
D26V4, multiclass
        clus
vv       15Q GAIN MUTATED 15Q GAIN WILD-TYPE
  CLUS_1                0                 31
  CLUS_2                4                 62
  CLUS_3                0                 64
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q GAIN MUTATED        3      1      1
  15Q GAIN WILD-TYPE     53     61     53
D26V5, multiclass
        clus
vv       15Q GAIN MUTATED 15Q GAIN WILD-TYPE
  CLUS_1                3                 53
  CLUS_2                1                 61
  CLUS_3                1                 53
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q GAIN MUTATED        1      2      2
  15Q GAIN WILD-TYPE     17     78     72
D26V6, multiclass
        clus
vv       15Q GAIN MUTATED 15Q GAIN WILD-TYPE
  CLUS_1                1                 17
  CLUS_2                2                 78
  CLUS_3                2                 72
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q GAIN MUTATED        2      1      2
  15Q GAIN WILD-TYPE     52     64     51
D26V7, multiclass
        clus
vv       15Q GAIN MUTATED 15Q GAIN WILD-TYPE
  CLUS_1                2                 52
  CLUS_2                1                 64
  CLUS_3                2                 51
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q GAIN MUTATED        1      3      1
  15Q GAIN WILD-TYPE     13     84     70
D26V8, multiclass
        clus
vv       15Q GAIN MUTATED 15Q GAIN WILD-TYPE
  CLUS_1                1                 13
  CLUS_2                3                 84
  CLUS_3                1                 70

Clustering(27) Variable = 16P GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16P GAIN MUTATED       33     28     15     13
  16P GAIN WILD-TYPE      0     40     22     21
D27V1, multiclass
        clus
vv       16P GAIN MUTATED 16P GAIN WILD-TYPE
  CLUS_1               33                  0
  CLUS_2               28                 40
  CLUS_3               15                 22
  CLUS_4               13                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P GAIN MUTATED       20     20     42
  16P GAIN WILD-TYPE     23     23     28
D27V2, multiclass
        clus
vv       16P GAIN MUTATED 16P GAIN WILD-TYPE
  CLUS_1               20                 23
  CLUS_2               20                 23
  CLUS_3               42                 28
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16P GAIN MUTATED       19     28     24     13
  16P GAIN WILD-TYPE     39     21      7     10
D27V3, multiclass
        clus
vv       16P GAIN MUTATED 16P GAIN WILD-TYPE
  CLUS_1               19                 39
  CLUS_2               28                 21
  CLUS_3               24                  7
  CLUS_4               13                 10
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P GAIN MUTATED        7     42     35
  16P GAIN WILD-TYPE     24     24     29
D27V4, multiclass
        clus
vv       16P GAIN MUTATED 16P GAIN WILD-TYPE
  CLUS_1                7                 24
  CLUS_2               42                 24
  CLUS_3               35                 29
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P GAIN MUTATED       33     24     32
  16P GAIN WILD-TYPE     23     38     22
D27V5, multiclass
        clus
vv       16P GAIN MUTATED 16P GAIN WILD-TYPE
  CLUS_1               33                 23
  CLUS_2               24                 38
  CLUS_3               32                 22
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P GAIN MUTATED        9     50     30
  16P GAIN WILD-TYPE      9     30     44
D27V6, multiclass
        clus
vv       16P GAIN MUTATED 16P GAIN WILD-TYPE
  CLUS_1                9                  9
  CLUS_2               50                 30
  CLUS_3               30                 44
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P GAIN MUTATED       35     23     31
  16P GAIN WILD-TYPE     19     42     22
D27V7, multiclass
        clus
vv       16P GAIN MUTATED 16P GAIN WILD-TYPE
  CLUS_1               35                 19
  CLUS_2               23                 42
  CLUS_3               31                 22
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P GAIN MUTATED        7     54     28
  16P GAIN WILD-TYPE      7     33     43
D27V8, multiclass
        clus
vv       16P GAIN MUTATED 16P GAIN WILD-TYPE
  CLUS_1                7                  7
  CLUS_2               54                 33
  CLUS_3               28                 43

Clustering(28) Variable = 16Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16Q GAIN MUTATED       33     28     14     10
  16Q GAIN WILD-TYPE      0     40     23     24
D28V1, multiclass
        clus
vv       16Q GAIN MUTATED 16Q GAIN WILD-TYPE
  CLUS_1               33                  0
  CLUS_2               28                 40
  CLUS_3               14                 23
  CLUS_4               10                 24
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q GAIN MUTATED       20     17     42
  16Q GAIN WILD-TYPE     23     26     28
D28V2, multiclass
        clus
vv       16Q GAIN MUTATED 16Q GAIN WILD-TYPE
  CLUS_1               20                 23
  CLUS_2               17                 26
  CLUS_3               42                 28
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16Q GAIN MUTATED       16     27     24     13
  16Q GAIN WILD-TYPE     42     22      7     10
D28V3, multiclass
        clus
vv       16Q GAIN MUTATED 16Q GAIN WILD-TYPE
  CLUS_1               16                 42
  CLUS_2               27                 22
  CLUS_3               24                  7
  CLUS_4               13                 10
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q GAIN MUTATED        7     39     34
  16Q GAIN WILD-TYPE     24     27     30
D28V4, multiclass
        clus
vv       16Q GAIN MUTATED 16Q GAIN WILD-TYPE
  CLUS_1                7                 24
  CLUS_2               39                 27
  CLUS_3               34                 30
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q GAIN MUTATED       32     21     32
  16Q GAIN WILD-TYPE     24     41     22
D28V5, multiclass
        clus
vv       16Q GAIN MUTATED 16Q GAIN WILD-TYPE
  CLUS_1               32                 24
  CLUS_2               21                 41
  CLUS_3               32                 22
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q GAIN MUTATED        5     51     29
  16Q GAIN WILD-TYPE     13     29     45
D28V6, multiclass
        clus
vv       16Q GAIN MUTATED 16Q GAIN WILD-TYPE
  CLUS_1                5                 13
  CLUS_2               51                 29
  CLUS_3               29                 45
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q GAIN MUTATED       34     21     30
  16Q GAIN WILD-TYPE     20     44     23
D28V7, multiclass
        clus
vv       16Q GAIN MUTATED 16Q GAIN WILD-TYPE
  CLUS_1               34                 20
  CLUS_2               21                 44
  CLUS_3               30                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q GAIN MUTATED        4     54     27
  16Q GAIN WILD-TYPE     10     33     44
D28V8, multiclass
        clus
vv       16Q GAIN MUTATED 16Q GAIN WILD-TYPE
  CLUS_1                4                 10
  CLUS_2               54                 33
  CLUS_3               27                 44

Clustering(29) Variable = 17P GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  17P GAIN MUTATED       32     21     36     13
  17P GAIN WILD-TYPE      1     47      1     21
D29V1, multiclass
        clus
vv       17P GAIN MUTATED 17P GAIN WILD-TYPE
  CLUS_1               32                  1
  CLUS_2               21                 47
  CLUS_3               36                  1
  CLUS_4               13                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P GAIN MUTATED       19     15     58
  17P GAIN WILD-TYPE     24     28     12
D29V2, multiclass
        clus
vv       17P GAIN MUTATED 17P GAIN WILD-TYPE
  CLUS_1               19                 24
  CLUS_2               15                 28
  CLUS_3               58                 12
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  17P GAIN MUTATED       15     44     19     15
  17P GAIN WILD-TYPE     43      5     12      8
D29V3, multiclass
        clus
vv       17P GAIN MUTATED 17P GAIN WILD-TYPE
  CLUS_1               15                 43
  CLUS_2               44                  5
  CLUS_3               19                 12
  CLUS_4               15                  8
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P GAIN MUTATED        7     32     54
  17P GAIN WILD-TYPE     24     34     10
D29V4, multiclass
        clus
vv       17P GAIN MUTATED 17P GAIN WILD-TYPE
  CLUS_1                7                 24
  CLUS_2               32                 34
  CLUS_3               54                 10
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P GAIN MUTATED       28     34     40
  17P GAIN WILD-TYPE     28     28     14
D29V5, multiclass
        clus
vv       17P GAIN MUTATED 17P GAIN WILD-TYPE
  CLUS_1               28                 28
  CLUS_2               34                 28
  CLUS_3               40                 14
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P GAIN MUTATED        3     55     44
  17P GAIN WILD-TYPE     15     25     30
D29V6, multiclass
        clus
vv       17P GAIN MUTATED 17P GAIN WILD-TYPE
  CLUS_1                3                 15
  CLUS_2               55                 25
  CLUS_3               44                 30
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P GAIN MUTATED       28     37     37
  17P GAIN WILD-TYPE     26     28     16
D29V7, multiclass
        clus
vv       17P GAIN MUTATED 17P GAIN WILD-TYPE
  CLUS_1               28                 26
  CLUS_2               37                 28
  CLUS_3               37                 16
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P GAIN MUTATED        3     57     42
  17P GAIN WILD-TYPE     11     30     29
D29V8, multiclass
        clus
vv       17P GAIN MUTATED 17P GAIN WILD-TYPE
  CLUS_1                3                 11
  CLUS_2               57                 30
  CLUS_3               42                 29

Clustering(30) Variable = 17Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  17Q GAIN MUTATED       32     29     36     20
  17Q GAIN WILD-TYPE      1     39      1     14
D30V1, multiclass
        clus
vv       17Q GAIN MUTATED 17Q GAIN WILD-TYPE
  CLUS_1               32                  1
  CLUS_2               29                 39
  CLUS_3               36                  1
  CLUS_4               20                 14
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17Q GAIN MUTATED       24     24     58
  17Q GAIN WILD-TYPE     19     19     12
D30V2, multiclass
        clus
vv       17Q GAIN MUTATED 17Q GAIN WILD-TYPE
  CLUS_1               24                 19
  CLUS_2               24                 19
  CLUS_3               58                 12
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  17Q GAIN MUTATED       25     45     22     16
  17Q GAIN WILD-TYPE     33      4      9      7
D30V3, multiclass
        clus
vv       17Q GAIN MUTATED 17Q GAIN WILD-TYPE
  CLUS_1               25                 33
  CLUS_2               45                  4
  CLUS_3               22                  9
  CLUS_4               16                  7
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17Q GAIN MUTATED       12     41     55
  17Q GAIN WILD-TYPE     19     25      9
D30V4, multiclass
        clus
vv       17Q GAIN MUTATED 17Q GAIN WILD-TYPE
  CLUS_1               12                 19
  CLUS_2               41                 25
  CLUS_3               55                  9
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17Q GAIN MUTATED       35     41     41
  17Q GAIN WILD-TYPE     21     21     13
D30V5, multiclass
        clus
vv       17Q GAIN MUTATED 17Q GAIN WILD-TYPE
  CLUS_1               35                 21
  CLUS_2               41                 21
  CLUS_3               41                 13
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17Q GAIN MUTATED        8     58     51
  17Q GAIN WILD-TYPE     10     22     23
D30V6, multiclass
        clus
vv       17Q GAIN MUTATED 17Q GAIN WILD-TYPE
  CLUS_1                8                 10
  CLUS_2               58                 22
  CLUS_3               51                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17Q GAIN MUTATED       34     44     39
  17Q GAIN WILD-TYPE     20     21     14
D30V7, multiclass
        clus
vv       17Q GAIN MUTATED 17Q GAIN WILD-TYPE
  CLUS_1               34                 20
  CLUS_2               44                 21
  CLUS_3               39                 14
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17Q GAIN MUTATED        6     62     49
  17Q GAIN WILD-TYPE      8     25     22
D30V8, multiclass
        clus
vv       17Q GAIN MUTATED 17Q GAIN WILD-TYPE
  CLUS_1                6                  8
  CLUS_2               62                 25
  CLUS_3               49                 22

Clustering(31) Variable = 18P GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18P GAIN MUTATED        3      1      2      3
  18P GAIN WILD-TYPE     30     67     35     31
D31V1, multiclass
        clus
vv       18P GAIN MUTATED 18P GAIN WILD-TYPE
  CLUS_1                3                 30
  CLUS_2                1                 67
  CLUS_3                2                 35
  CLUS_4                3                 31
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P GAIN MUTATED        0      2      4
  18P GAIN WILD-TYPE     43     41     66
D31V2, multiclass
        clus
vv       18P GAIN MUTATED 18P GAIN WILD-TYPE
  CLUS_1                0                 43
  CLUS_2                2                 41
  CLUS_3                4                 66
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18P GAIN MUTATED        4      3      2      0
  18P GAIN WILD-TYPE     54     46     29     23
D31V3, multiclass
        clus
vv       18P GAIN MUTATED 18P GAIN WILD-TYPE
  CLUS_1                4                 54
  CLUS_2                3                 46
  CLUS_3                2                 29
  CLUS_4                0                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P GAIN MUTATED        2      4      3
  18P GAIN WILD-TYPE     29     62     61
D31V4, multiclass
        clus
vv       18P GAIN MUTATED 18P GAIN WILD-TYPE
  CLUS_1                2                 29
  CLUS_2                4                 62
  CLUS_3                3                 61
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P GAIN MUTATED        1      6      2
  18P GAIN WILD-TYPE     55     56     52
D31V5, multiclass
        clus
vv       18P GAIN MUTATED 18P GAIN WILD-TYPE
  CLUS_1                1                 55
  CLUS_2                6                 56
  CLUS_3                2                 52
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P GAIN MUTATED        2      1      6
  18P GAIN WILD-TYPE     16     79     68
D31V6, multiclass
        clus
vv       18P GAIN MUTATED 18P GAIN WILD-TYPE
  CLUS_1                2                 16
  CLUS_2                1                 79
  CLUS_3                6                 68
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P GAIN MUTATED        1      5      3
  18P GAIN WILD-TYPE     53     60     50
D31V7, multiclass
        clus
vv       18P GAIN MUTATED 18P GAIN WILD-TYPE
  CLUS_1                1                 53
  CLUS_2                5                 60
  CLUS_3                3                 50
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P GAIN MUTATED        2      3      4
  18P GAIN WILD-TYPE     12     84     67
D31V8, multiclass
        clus
vv       18P GAIN MUTATED 18P GAIN WILD-TYPE
  CLUS_1                2                 12
  CLUS_2                3                 84
  CLUS_3                4                 67

Clustering(32) Variable = 18Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18Q GAIN MUTATED        3      1      1      0
  18Q GAIN WILD-TYPE     30     67     36     34
D32V1, multiclass
        clus
vv       18Q GAIN MUTATED 18Q GAIN WILD-TYPE
  CLUS_1                3                 30
  CLUS_2                1                 67
  CLUS_3                1                 36
  CLUS_4                0                 34
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q GAIN MUTATED        0      0      3
  18Q GAIN WILD-TYPE     43     43     67
D32V2, multiclass
        clus
vv       18Q GAIN MUTATED 18Q GAIN WILD-TYPE
  CLUS_1                0                 43
  CLUS_2                0                 43
  CLUS_3                3                 67
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18Q GAIN MUTATED        1      2      2      0
  18Q GAIN WILD-TYPE     57     47     29     23
D32V3, multiclass
        clus
vv       18Q GAIN MUTATED 18Q GAIN WILD-TYPE
  CLUS_1                1                 57
  CLUS_2                2                 47
  CLUS_3                2                 29
  CLUS_4                0                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q GAIN MUTATED        1      2      2
  18Q GAIN WILD-TYPE     30     64     62
D32V4, multiclass
        clus
vv       18Q GAIN MUTATED 18Q GAIN WILD-TYPE
  CLUS_1                1                 30
  CLUS_2                2                 64
  CLUS_3                2                 62
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q GAIN MUTATED        1      3      1
  18Q GAIN WILD-TYPE     55     59     53
D32V5, multiclass
        clus
vv       18Q GAIN MUTATED 18Q GAIN WILD-TYPE
  CLUS_1                1                 55
  CLUS_2                3                 59
  CLUS_3                1                 53
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q GAIN MUTATED        0      1      4
  18Q GAIN WILD-TYPE     18     79     70
D32V6, multiclass
        clus
vv       18Q GAIN MUTATED 18Q GAIN WILD-TYPE
  CLUS_1                0                 18
  CLUS_2                1                 79
  CLUS_3                4                 70
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q GAIN MUTATED        1      3      1
  18Q GAIN WILD-TYPE     53     62     52
D32V7, multiclass
        clus
vv       18Q GAIN MUTATED 18Q GAIN WILD-TYPE
  CLUS_1                1                 53
  CLUS_2                3                 62
  CLUS_3                1                 52
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q GAIN MUTATED        0      3      2
  18Q GAIN WILD-TYPE     14     84     69
D32V8, multiclass
        clus
vv       18Q GAIN MUTATED 18Q GAIN WILD-TYPE
  CLUS_1                0                 14
  CLUS_2                3                 84
  CLUS_3                2                 69

Clustering(33) Variable = 19P GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19P GAIN MUTATED        0      1      0      2
  19P GAIN WILD-TYPE     33     67     37     32
D33V1, multiclass
        clus
vv       19P GAIN MUTATED 19P GAIN WILD-TYPE
  CLUS_1                0                 33
  CLUS_2                1                 67
  CLUS_3                0                 37
  CLUS_4                2                 32
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P GAIN MUTATED        0      2      1
  19P GAIN WILD-TYPE     43     41     69
D33V2, multiclass
        clus
vv       19P GAIN MUTATED 19P GAIN WILD-TYPE
  CLUS_1                0                 43
  CLUS_2                2                 41
  CLUS_3                1                 69
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19P GAIN MUTATED        2      0      1      0
  19P GAIN WILD-TYPE     56     49     30     23
D33V3, multiclass
        clus
vv       19P GAIN MUTATED 19P GAIN WILD-TYPE
  CLUS_1                2                 56
  CLUS_2                0                 49
  CLUS_3                1                 30
  CLUS_4                0                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P GAIN MUTATED        1      2      0
  19P GAIN WILD-TYPE     30     64     64
D33V4, multiclass
        clus
vv       19P GAIN MUTATED 19P GAIN WILD-TYPE
  CLUS_1                1                 30
  CLUS_2                2                 64
  CLUS_3                0                 64
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P GAIN MUTATED        2      1      0
  19P GAIN WILD-TYPE     54     61     54
D33V5, multiclass
        clus
vv       19P GAIN MUTATED 19P GAIN WILD-TYPE
  CLUS_1                2                 54
  CLUS_2                1                 61
  CLUS_3                0                 54
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P GAIN MUTATED        2      0      1
  19P GAIN WILD-TYPE     16     80     73
D33V6, multiclass
        clus
vv       19P GAIN MUTATED 19P GAIN WILD-TYPE
  CLUS_1                2                 16
  CLUS_2                0                 80
  CLUS_3                1                 73
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P GAIN MUTATED        2      1      0
  19P GAIN WILD-TYPE     52     64     53
D33V7, multiclass
        clus
vv       19P GAIN MUTATED 19P GAIN WILD-TYPE
  CLUS_1                2                 52
  CLUS_2                1                 64
  CLUS_3                0                 53
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P GAIN MUTATED        1      1      1
  19P GAIN WILD-TYPE     13     86     70
D33V8, multiclass
        clus
vv       19P GAIN MUTATED 19P GAIN WILD-TYPE
  CLUS_1                1                 13
  CLUS_2                1                 86
  CLUS_3                1                 70

Clustering(34) Variable = 19Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19Q GAIN MUTATED        0      1      0      2
  19Q GAIN WILD-TYPE     33     67     37     32
D34V1, multiclass
        clus
vv       19Q GAIN MUTATED 19Q GAIN WILD-TYPE
  CLUS_1                0                 33
  CLUS_2                1                 67
  CLUS_3                0                 37
  CLUS_4                2                 32
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q GAIN MUTATED        0      2      1
  19Q GAIN WILD-TYPE     43     41     69
D34V2, multiclass
        clus
vv       19Q GAIN MUTATED 19Q GAIN WILD-TYPE
  CLUS_1                0                 43
  CLUS_2                2                 41
  CLUS_3                1                 69
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19Q GAIN MUTATED        2      0      1      0
  19Q GAIN WILD-TYPE     56     49     30     23
D34V3, multiclass
        clus
vv       19Q GAIN MUTATED 19Q GAIN WILD-TYPE
  CLUS_1                2                 56
  CLUS_2                0                 49
  CLUS_3                1                 30
  CLUS_4                0                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q GAIN MUTATED        1      2      0
  19Q GAIN WILD-TYPE     30     64     64
D34V4, multiclass
        clus
vv       19Q GAIN MUTATED 19Q GAIN WILD-TYPE
  CLUS_1                1                 30
  CLUS_2                2                 64
  CLUS_3                0                 64
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q GAIN MUTATED        2      1      0
  19Q GAIN WILD-TYPE     54     61     54
D34V5, multiclass
        clus
vv       19Q GAIN MUTATED 19Q GAIN WILD-TYPE
  CLUS_1                2                 54
  CLUS_2                1                 61
  CLUS_3                0                 54
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q GAIN MUTATED        2      0      1
  19Q GAIN WILD-TYPE     16     80     73
D34V6, multiclass
        clus
vv       19Q GAIN MUTATED 19Q GAIN WILD-TYPE
  CLUS_1                2                 16
  CLUS_2                0                 80
  CLUS_3                1                 73
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q GAIN MUTATED        2      1      0
  19Q GAIN WILD-TYPE     52     64     53
D34V7, multiclass
        clus
vv       19Q GAIN MUTATED 19Q GAIN WILD-TYPE
  CLUS_1                2                 52
  CLUS_2                1                 64
  CLUS_3                0                 53
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q GAIN MUTATED        1      1      1
  19Q GAIN WILD-TYPE     13     86     70
D34V8, multiclass
        clus
vv       19Q GAIN MUTATED 19Q GAIN WILD-TYPE
  CLUS_1                1                 13
  CLUS_2                1                 86
  CLUS_3                1                 70

Clustering(35) Variable = 20P GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  20P GAIN MUTATED       18     12     15     13
  20P GAIN WILD-TYPE     15     56     22     21
D35V1, multiclass
        clus
vv       20P GAIN MUTATED 20P GAIN WILD-TYPE
  CLUS_1               18                 15
  CLUS_2               12                 56
  CLUS_3               15                 22
  CLUS_4               13                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20P GAIN MUTATED        9     14     28
  20P GAIN WILD-TYPE     34     29     42
D35V2, multiclass
        clus
vv       20P GAIN MUTATED 20P GAIN WILD-TYPE
  CLUS_1                9                 34
  CLUS_2               14                 29
  CLUS_3               28                 42
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  20P GAIN MUTATED       14     23      9      6
  20P GAIN WILD-TYPE     44     26     22     17
D35V3, multiclass
        clus
vv       20P GAIN MUTATED 20P GAIN WILD-TYPE
  CLUS_1               14                 44
  CLUS_2               23                 26
  CLUS_3                9                 22
  CLUS_4                6                 17
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20P GAIN MUTATED        8     19     25
  20P GAIN WILD-TYPE     23     47     39
D35V4, multiclass
        clus
vv       20P GAIN MUTATED 20P GAIN WILD-TYPE
  CLUS_1                8                 23
  CLUS_2               19                 47
  CLUS_3               25                 39
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20P GAIN MUTATED       15     21     22
  20P GAIN WILD-TYPE     41     41     32
D35V5, multiclass
        clus
vv       20P GAIN MUTATED 20P GAIN WILD-TYPE
  CLUS_1               15                 41
  CLUS_2               21                 41
  CLUS_3               22                 32
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20P GAIN MUTATED        5     30     23
  20P GAIN WILD-TYPE     13     50     51
D35V6, multiclass
        clus
vv       20P GAIN MUTATED 20P GAIN WILD-TYPE
  CLUS_1                5                 13
  CLUS_2               30                 50
  CLUS_3               23                 51
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20P GAIN MUTATED       17     22     19
  20P GAIN WILD-TYPE     37     43     34
D35V7, multiclass
        clus
vv       20P GAIN MUTATED 20P GAIN WILD-TYPE
  CLUS_1               17                 37
  CLUS_2               22                 43
  CLUS_3               19                 34
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20P GAIN MUTATED        6     29     23
  20P GAIN WILD-TYPE      8     58     48
D35V8, multiclass
        clus
vv       20P GAIN MUTATED 20P GAIN WILD-TYPE
  CLUS_1                6                  8
  CLUS_2               29                 58
  CLUS_3               23                 48

Clustering(36) Variable = 20Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  20Q GAIN MUTATED       18     14     15     13
  20Q GAIN WILD-TYPE     15     54     22     21
D36V1, multiclass
        clus
vv       20Q GAIN MUTATED 20Q GAIN WILD-TYPE
  CLUS_1               18                 15
  CLUS_2               14                 54
  CLUS_3               15                 22
  CLUS_4               13                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20Q GAIN MUTATED        9     15     28
  20Q GAIN WILD-TYPE     34     28     42
D36V2, multiclass
        clus
vv       20Q GAIN MUTATED 20Q GAIN WILD-TYPE
  CLUS_1                9                 34
  CLUS_2               15                 28
  CLUS_3               28                 42
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  20Q GAIN MUTATED       16     23      9      6
  20Q GAIN WILD-TYPE     42     26     22     17
D36V3, multiclass
        clus
vv       20Q GAIN MUTATED 20Q GAIN WILD-TYPE
  CLUS_1               16                 42
  CLUS_2               23                 26
  CLUS_3                9                 22
  CLUS_4                6                 17
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20Q GAIN MUTATED       10     19     25
  20Q GAIN WILD-TYPE     21     47     39
D36V4, multiclass
        clus
vv       20Q GAIN MUTATED 20Q GAIN WILD-TYPE
  CLUS_1               10                 21
  CLUS_2               19                 47
  CLUS_3               25                 39
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20Q GAIN MUTATED       15     23     22
  20Q GAIN WILD-TYPE     41     39     32
D36V5, multiclass
        clus
vv       20Q GAIN MUTATED 20Q GAIN WILD-TYPE
  CLUS_1               15                 41
  CLUS_2               23                 39
  CLUS_3               22                 32
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20Q GAIN MUTATED        5     30     25
  20Q GAIN WILD-TYPE     13     50     49
D36V6, multiclass
        clus
vv       20Q GAIN MUTATED 20Q GAIN WILD-TYPE
  CLUS_1                5                 13
  CLUS_2               30                 50
  CLUS_3               25                 49
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20Q GAIN MUTATED       17     24     19
  20Q GAIN WILD-TYPE     37     41     34
D36V7, multiclass
        clus
vv       20Q GAIN MUTATED 20Q GAIN WILD-TYPE
  CLUS_1               17                 37
  CLUS_2               24                 41
  CLUS_3               19                 34
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20Q GAIN MUTATED        6     29     25
  20Q GAIN WILD-TYPE      8     58     46
D36V8, multiclass
        clus
vv       20Q GAIN MUTATED 20Q GAIN WILD-TYPE
  CLUS_1                6                  8
  CLUS_2               29                 58
  CLUS_3               25                 46

Clustering(37) Variable = 21Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  21Q GAIN MUTATED        2      5      3      2
  21Q GAIN WILD-TYPE     31     63     34     32
D37V1, multiclass
        clus
vv       21Q GAIN MUTATED 21Q GAIN WILD-TYPE
  CLUS_1                2                 31
  CLUS_2                5                 63
  CLUS_3                3                 34
  CLUS_4                2                 32
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q GAIN MUTATED        1      4      6
  21Q GAIN WILD-TYPE     42     39     64
D37V2, multiclass
        clus
vv       21Q GAIN MUTATED 21Q GAIN WILD-TYPE
  CLUS_1                1                 42
  CLUS_2                4                 39
  CLUS_3                6                 64
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  21Q GAIN MUTATED        3      8      1      0
  21Q GAIN WILD-TYPE     55     41     30     23
D37V3, multiclass
        clus
vv       21Q GAIN MUTATED 21Q GAIN WILD-TYPE
  CLUS_1                3                 55
  CLUS_2                8                 41
  CLUS_3                1                 30
  CLUS_4                0                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q GAIN MUTATED        2      2      8
  21Q GAIN WILD-TYPE     29     64     56
D37V4, multiclass
        clus
vv       21Q GAIN MUTATED 21Q GAIN WILD-TYPE
  CLUS_1                2                 29
  CLUS_2                2                 64
  CLUS_3                8                 56
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q GAIN MUTATED        3      3      6
  21Q GAIN WILD-TYPE     53     59     48
D37V5, multiclass
        clus
vv       21Q GAIN MUTATED 21Q GAIN WILD-TYPE
  CLUS_1                3                 53
  CLUS_2                3                 59
  CLUS_3                6                 48
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q GAIN MUTATED        1      4      7
  21Q GAIN WILD-TYPE     17     76     67
D37V6, multiclass
        clus
vv       21Q GAIN MUTATED 21Q GAIN WILD-TYPE
  CLUS_1                1                 17
  CLUS_2                4                 76
  CLUS_3                7                 67
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q GAIN MUTATED        4      2      6
  21Q GAIN WILD-TYPE     50     63     47
D37V7, multiclass
        clus
vv       21Q GAIN MUTATED 21Q GAIN WILD-TYPE
  CLUS_1                4                 50
  CLUS_2                2                 63
  CLUS_3                6                 47
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q GAIN MUTATED        1      4      7
  21Q GAIN WILD-TYPE     13     83     64
D37V8, multiclass
        clus
vv       21Q GAIN MUTATED 21Q GAIN WILD-TYPE
  CLUS_1                1                 13
  CLUS_2                4                 83
  CLUS_3                7                 64

Clustering(38) Variable = XQ GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XQ GAIN MUTATED       28      5     15      6
  XQ GAIN WILD-TYPE      5     63     22     28
D38V1, multiclass
        clus
vv       XQ GAIN MUTATED XQ GAIN WILD-TYPE
  CLUS_1              28                 5
  CLUS_2               5                63
  CLUS_3              15                22
  CLUS_4               6                28
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ GAIN MUTATED       10      7     30
  XQ GAIN WILD-TYPE     33     36     40
D38V2, multiclass
        clus
vv       XQ GAIN MUTATED XQ GAIN WILD-TYPE
  CLUS_1              10                33
  CLUS_2               7                36
  CLUS_3              30                40
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XQ GAIN MUTATED        6     27     12      7
  XQ GAIN WILD-TYPE     52     22     19     16
D38V3, multiclass
        clus
vv       XQ GAIN MUTATED XQ GAIN WILD-TYPE
  CLUS_1               6                52
  CLUS_2              27                22
  CLUS_3              12                19
  CLUS_4               7                16
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ GAIN MUTATED        2     19     31
  XQ GAIN WILD-TYPE     29     47     33
D38V4, multiclass
        clus
vv       XQ GAIN MUTATED XQ GAIN WILD-TYPE
  CLUS_1               2                29
  CLUS_2              19                47
  CLUS_3              31                33
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ GAIN MUTATED       17     12     25
  XQ GAIN WILD-TYPE     39     50     29
D38V5, multiclass
        clus
vv       XQ GAIN MUTATED XQ GAIN WILD-TYPE
  CLUS_1              17                39
  CLUS_2              12                50
  CLUS_3              25                29
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ GAIN MUTATED        2     34     18
  XQ GAIN WILD-TYPE     16     46     56
D38V6, multiclass
        clus
vv       XQ GAIN MUTATED XQ GAIN WILD-TYPE
  CLUS_1               2                16
  CLUS_2              34                46
  CLUS_3              18                56
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ GAIN MUTATED       17     13     24
  XQ GAIN WILD-TYPE     37     52     29
D38V7, multiclass
        clus
vv       XQ GAIN MUTATED XQ GAIN WILD-TYPE
  CLUS_1              17                37
  CLUS_2              13                52
  CLUS_3              24                29
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ GAIN MUTATED        2     33     19
  XQ GAIN WILD-TYPE     12     54     52
D38V8, multiclass
        clus
vv       XQ GAIN MUTATED XQ GAIN WILD-TYPE
  CLUS_1               2                12
  CLUS_2              33                54
  CLUS_3              19                52

Clustering(39) Variable = 1P LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1P LOSS MUTATED        1      9      0     11
  1P LOSS WILD-TYPE     32     59     37     23
D39V1, multiclass
        clus
vv       1P LOSS MUTATED 1P LOSS WILD-TYPE
  CLUS_1               1                32
  CLUS_2               9                59
  CLUS_3               0                37
  CLUS_4              11                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P LOSS MUTATED        5     10      5
  1P LOSS WILD-TYPE     38     33     65
D39V2, multiclass
        clus
vv       1P LOSS MUTATED 1P LOSS WILD-TYPE
  CLUS_1               5                38
  CLUS_2              10                33
  CLUS_3               5                65
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1P LOSS MUTATED       14      3      1      0
  1P LOSS WILD-TYPE     44     46     30     23
D39V3, multiclass
        clus
vv       1P LOSS MUTATED 1P LOSS WILD-TYPE
  CLUS_1              14                44
  CLUS_2               3                46
  CLUS_3               1                30
  CLUS_4               0                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P LOSS MUTATED        9      6      3
  1P LOSS WILD-TYPE     22     60     61
D39V4, multiclass
        clus
vv       1P LOSS MUTATED 1P LOSS WILD-TYPE
  CLUS_1               9                22
  CLUS_2               6                60
  CLUS_3               3                61
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P LOSS MUTATED        7      8      6
  1P LOSS WILD-TYPE     49     54     48
D39V5, multiclass
        clus
vv       1P LOSS MUTATED 1P LOSS WILD-TYPE
  CLUS_1               7                49
  CLUS_2               8                54
  CLUS_3               6                48
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P LOSS MUTATED        3     10      8
  1P LOSS WILD-TYPE     15     70     66
D39V6, multiclass
        clus
vv       1P LOSS MUTATED 1P LOSS WILD-TYPE
  CLUS_1               3                15
  CLUS_2              10                70
  CLUS_3               8                66
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P LOSS MUTATED        6      8      7
  1P LOSS WILD-TYPE     48     57     46
D39V7, multiclass
        clus
vv       1P LOSS MUTATED 1P LOSS WILD-TYPE
  CLUS_1               6                48
  CLUS_2               8                57
  CLUS_3               7                46
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P LOSS MUTATED        2     11      8
  1P LOSS WILD-TYPE     12     76     63
D39V8, multiclass
        clus
vv       1P LOSS MUTATED 1P LOSS WILD-TYPE
  CLUS_1               2                12
  CLUS_2              11                76
  CLUS_3               8                63

Clustering(40) Variable = 1Q LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1Q LOSS MUTATED        1      7      0      5
  1Q LOSS WILD-TYPE     32     61     37     29
D40V1, multiclass
        clus
vv       1Q LOSS MUTATED 1Q LOSS WILD-TYPE
  CLUS_1               1                32
  CLUS_2               7                61
  CLUS_3               0                37
  CLUS_4               5                29
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q LOSS MUTATED        5      2      5
  1Q LOSS WILD-TYPE     38     41     65
D40V2, multiclass
        clus
vv       1Q LOSS MUTATED 1Q LOSS WILD-TYPE
  CLUS_1               5                38
  CLUS_2               2                41
  CLUS_3               5                65
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1Q LOSS MUTATED        5      3      2      0
  1Q LOSS WILD-TYPE     53     46     29     23
D40V3, multiclass
        clus
vv       1Q LOSS MUTATED 1Q LOSS WILD-TYPE
  CLUS_1               5                53
  CLUS_2               3                46
  CLUS_3               2                29
  CLUS_4               0                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q LOSS MUTATED        6      1      3
  1Q LOSS WILD-TYPE     25     65     61
D40V4, multiclass
        clus
vv       1Q LOSS MUTATED 1Q LOSS WILD-TYPE
  CLUS_1               6                25
  CLUS_2               1                65
  CLUS_3               3                61
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q LOSS MUTATED        4      4      5
  1Q LOSS WILD-TYPE     52     58     49
D40V5, multiclass
        clus
vv       1Q LOSS MUTATED 1Q LOSS WILD-TYPE
  CLUS_1               4                52
  CLUS_2               4                58
  CLUS_3               5                49
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q LOSS MUTATED        0      9      4
  1Q LOSS WILD-TYPE     18     71     70
D40V6, multiclass
        clus
vv       1Q LOSS MUTATED 1Q LOSS WILD-TYPE
  CLUS_1               0                18
  CLUS_2               9                71
  CLUS_3               4                70
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q LOSS MUTATED        3      4      6
  1Q LOSS WILD-TYPE     51     61     47
D40V7, multiclass
        clus
vv       1Q LOSS MUTATED 1Q LOSS WILD-TYPE
  CLUS_1               3                51
  CLUS_2               4                61
  CLUS_3               6                47
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q LOSS MUTATED        0      9      4
  1Q LOSS WILD-TYPE     14     78     67
D40V8, multiclass
        clus
vv       1Q LOSS MUTATED 1Q LOSS WILD-TYPE
  CLUS_1               0                14
  CLUS_2               9                78
  CLUS_3               4                67

Clustering(41) Variable = 3P LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3P LOSS MUTATED        0      4      0     10
  3P LOSS WILD-TYPE     33     64     37     24
D41V1, multiclass
        clus
vv       3P LOSS MUTATED 3P LOSS WILD-TYPE
  CLUS_1               0                33
  CLUS_2               4                64
  CLUS_3               0                37
  CLUS_4              10                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P LOSS MUTATED        1     12      0
  3P LOSS WILD-TYPE     42     31     70
D41V2, multiclass
        clus
vv       3P LOSS MUTATED 3P LOSS WILD-TYPE
  CLUS_1               1                42
  CLUS_2              12                31
  CLUS_3               0                70
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3P LOSS MUTATED       12      0      2      0
  3P LOSS WILD-TYPE     46     49     29     23
D41V3, multiclass
        clus
vv       3P LOSS MUTATED 3P LOSS WILD-TYPE
  CLUS_1              12                46
  CLUS_2               0                49
  CLUS_3               2                29
  CLUS_4               0                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P LOSS MUTATED        3     11      0
  3P LOSS WILD-TYPE     28     55     64
D41V4, multiclass
        clus
vv       3P LOSS MUTATED 3P LOSS WILD-TYPE
  CLUS_1               3                28
  CLUS_2              11                55
  CLUS_3               0                64
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P LOSS MUTATED        6      8      0
  3P LOSS WILD-TYPE     50     54     54
D41V5, multiclass
        clus
vv       3P LOSS MUTATED 3P LOSS WILD-TYPE
  CLUS_1               6                50
  CLUS_2               8                54
  CLUS_3               0                54
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P LOSS MUTATED        5      2      7
  3P LOSS WILD-TYPE     13     78     67
D41V6, multiclass
        clus
vv       3P LOSS MUTATED 3P LOSS WILD-TYPE
  CLUS_1               5                13
  CLUS_2               2                78
  CLUS_3               7                67
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P LOSS MUTATED        5      7      2
  3P LOSS WILD-TYPE     49     58     51
D41V7, multiclass
        clus
vv       3P LOSS MUTATED 3P LOSS WILD-TYPE
  CLUS_1               5                49
  CLUS_2               7                58
  CLUS_3               2                51
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P LOSS MUTATED        5      1      8
  3P LOSS WILD-TYPE      9     86     63
D41V8, multiclass
        clus
vv       3P LOSS MUTATED 3P LOSS WILD-TYPE
  CLUS_1               5                 9
  CLUS_2               1                86
  CLUS_3               8                63

Clustering(42) Variable = 3Q LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3Q LOSS MUTATED        0      0      0      4
  3Q LOSS WILD-TYPE     33     68     37     30
D42V1, multiclass
        clus
vv       3Q LOSS MUTATED 3Q LOSS WILD-TYPE
  CLUS_1               0                33
  CLUS_2               0                68
  CLUS_3               0                37
  CLUS_4               4                30
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q LOSS MUTATED        0      4      0
  3Q LOSS WILD-TYPE     43     39     70
D42V2, multiclass
        clus
vv       3Q LOSS MUTATED 3Q LOSS WILD-TYPE
  CLUS_1               0                43
  CLUS_2               4                39
  CLUS_3               0                70
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3Q LOSS MUTATED        4      0      0      0
  3Q LOSS WILD-TYPE     54     49     31     23
D42V3, multiclass
        clus
vv       3Q LOSS MUTATED 3Q LOSS WILD-TYPE
  CLUS_1               4                54
  CLUS_2               0                49
  CLUS_3               0                31
  CLUS_4               0                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q LOSS MUTATED        3      1      0
  3Q LOSS WILD-TYPE     28     65     64
D42V4, multiclass
        clus
vv       3Q LOSS MUTATED 3Q LOSS WILD-TYPE
  CLUS_1               3                28
  CLUS_2               1                65
  CLUS_3               0                64
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q LOSS MUTATED        1      3      0
  3Q LOSS WILD-TYPE     55     59     54
D42V5, multiclass
        clus
vv       3Q LOSS MUTATED 3Q LOSS WILD-TYPE
  CLUS_1               1                55
  CLUS_2               3                59
  CLUS_3               0                54
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q LOSS MUTATED        0      1      3
  3Q LOSS WILD-TYPE     18     79     71
D42V6, multiclass
        clus
vv       3Q LOSS MUTATED 3Q LOSS WILD-TYPE
  CLUS_1               0                18
  CLUS_2               1                79
  CLUS_3               3                71
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q LOSS MUTATED        1      3      0
  3Q LOSS WILD-TYPE     53     62     53
D42V7, multiclass
        clus
vv       3Q LOSS MUTATED 3Q LOSS WILD-TYPE
  CLUS_1               1                53
  CLUS_2               3                62
  CLUS_3               0                53
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q LOSS MUTATED        1      0      3
  3Q LOSS WILD-TYPE     13     87     68
D42V8, multiclass
        clus
vv       3Q LOSS MUTATED 3Q LOSS WILD-TYPE
  CLUS_1               1                13
  CLUS_2               0                87
  CLUS_3               3                68

Clustering(43) Variable = 4P LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4P LOSS MUTATED        0      5      0     13
  4P LOSS WILD-TYPE     33     63     37     21
D43V1, multiclass
        clus
vv       4P LOSS MUTATED 4P LOSS WILD-TYPE
  CLUS_1               0                33
  CLUS_2               5                63
  CLUS_3               0                37
  CLUS_4              13                21
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P LOSS MUTATED        1     15      1
  4P LOSS WILD-TYPE     42     28     69
D43V2, multiclass
        clus
vv       4P LOSS MUTATED 4P LOSS WILD-TYPE
  CLUS_1               1                42
  CLUS_2              15                28
  CLUS_3               1                69
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4P LOSS MUTATED       17      0      0      0
  4P LOSS WILD-TYPE     41     49     31     23
D43V3, multiclass
        clus
vv       4P LOSS MUTATED 4P LOSS WILD-TYPE
  CLUS_1              17                41
  CLUS_2               0                49
  CLUS_3               0                31
  CLUS_4               0                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P LOSS MUTATED       10      7      0
  4P LOSS WILD-TYPE     21     59     64
D43V4, multiclass
        clus
vv       4P LOSS MUTATED 4P LOSS WILD-TYPE
  CLUS_1              10                21
  CLUS_2               7                59
  CLUS_3               0                64
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P LOSS MUTATED        4      9      5
  4P LOSS WILD-TYPE     52     53     49
D43V5, multiclass
        clus
vv       4P LOSS MUTATED 4P LOSS WILD-TYPE
  CLUS_1               4                52
  CLUS_2               9                53
  CLUS_3               5                49
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P LOSS MUTATED        2      4     12
  4P LOSS WILD-TYPE     16     76     62
D43V6, multiclass
        clus
vv       4P LOSS MUTATED 4P LOSS WILD-TYPE
  CLUS_1               2                16
  CLUS_2               4                76
  CLUS_3              12                62
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P LOSS MUTATED        4      8      6
  4P LOSS WILD-TYPE     50     57     47
D43V7, multiclass
        clus
vv       4P LOSS MUTATED 4P LOSS WILD-TYPE
  CLUS_1               4                50
  CLUS_2               8                57
  CLUS_3               6                47
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P LOSS MUTATED        2      4     12
  4P LOSS WILD-TYPE     12     83     59
D43V8, multiclass
        clus
vv       4P LOSS MUTATED 4P LOSS WILD-TYPE
  CLUS_1               2                12
  CLUS_2               4                83
  CLUS_3              12                59

Clustering(44) Variable = 4Q LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4Q LOSS MUTATED        0      5      0     14
  4Q LOSS WILD-TYPE     33     63     37     20
D44V1, multiclass
        clus
vv       4Q LOSS MUTATED 4Q LOSS WILD-TYPE
  CLUS_1               0                33
  CLUS_2               5                63
  CLUS_3               0                37
  CLUS_4              14                20
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q LOSS MUTATED        1     16      1
  4Q LOSS WILD-TYPE     42     27     69
D44V2, multiclass
        clus
vv       4Q LOSS MUTATED 4Q LOSS WILD-TYPE
  CLUS_1               1                42
  CLUS_2              16                27
  CLUS_3               1                69
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4Q LOSS MUTATED       18      0      0      0
  4Q LOSS WILD-TYPE     40     49     31     23
D44V3, multiclass
        clus
vv       4Q LOSS MUTATED 4Q LOSS WILD-TYPE
  CLUS_1              18                40
  CLUS_2               0                49
  CLUS_3               0                31
  CLUS_4               0                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q LOSS MUTATED        9      9      0
  4Q LOSS WILD-TYPE     22     57     64
D44V4, multiclass
        clus
vv       4Q LOSS MUTATED 4Q LOSS WILD-TYPE
  CLUS_1               9                22
  CLUS_2               9                57
  CLUS_3               0                64
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q LOSS MUTATED        5      9      5
  4Q LOSS WILD-TYPE     51     53     49
D44V5, multiclass
        clus
vv       4Q LOSS MUTATED 4Q LOSS WILD-TYPE
  CLUS_1               5                51
  CLUS_2               9                53
  CLUS_3               5                49
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q LOSS MUTATED        3      5     11
  4Q LOSS WILD-TYPE     15     75     63
D44V6, multiclass
        clus
vv       4Q LOSS MUTATED 4Q LOSS WILD-TYPE
  CLUS_1               3                15
  CLUS_2               5                75
  CLUS_3              11                63
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q LOSS MUTATED        4      8      7
  4Q LOSS WILD-TYPE     50     57     46
D44V7, multiclass
        clus
vv       4Q LOSS MUTATED 4Q LOSS WILD-TYPE
  CLUS_1               4                50
  CLUS_2               8                57
  CLUS_3               7                46
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q LOSS MUTATED        3      5     11
  4Q LOSS WILD-TYPE     11     82     60
D44V8, multiclass
        clus
vv       4Q LOSS MUTATED 4Q LOSS WILD-TYPE
  CLUS_1               3                11
  CLUS_2               5                82
  CLUS_3              11                60

Clustering(45) Variable = 5P LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5P LOSS MUTATED        1      3      0      3
  5P LOSS WILD-TYPE     32     65     37     31
D45V1, multiclass
        clus
vv       5P LOSS MUTATED 5P LOSS WILD-TYPE
  CLUS_1               1                32
  CLUS_2               3                65
  CLUS_3               0                37
  CLUS_4               3                31
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P LOSS MUTATED        1      6      0
  5P LOSS WILD-TYPE     42     37     70
D45V2, multiclass
        clus
vv       5P LOSS MUTATED 5P LOSS WILD-TYPE
  CLUS_1               1                42
  CLUS_2               6                37
  CLUS_3               0                70
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5P LOSS MUTATED        6      0      0      0
  5P LOSS WILD-TYPE     52     49     31     23
D45V3, multiclass
        clus
vv       5P LOSS MUTATED 5P LOSS WILD-TYPE
  CLUS_1               6                52
  CLUS_2               0                49
  CLUS_3               0                31
  CLUS_4               0                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P LOSS MUTATED        6      0      0
  5P LOSS WILD-TYPE     25     66     64
D45V4, multiclass
        clus
vv       5P LOSS MUTATED 5P LOSS WILD-TYPE
  CLUS_1               6                25
  CLUS_2               0                66
  CLUS_3               0                64
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P LOSS MUTATED        1      6      0
  5P LOSS WILD-TYPE     55     56     54
D45V5, multiclass
        clus
vv       5P LOSS MUTATED 5P LOSS WILD-TYPE
  CLUS_1               1                55
  CLUS_2               6                56
  CLUS_3               0                54
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P LOSS MUTATED        0      1      6
  5P LOSS WILD-TYPE     18     79     68
D45V6, multiclass
        clus
vv       5P LOSS MUTATED 5P LOSS WILD-TYPE
  CLUS_1               0                18
  CLUS_2               1                79
  CLUS_3               6                68
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P LOSS MUTATED        1      6      0
  5P LOSS WILD-TYPE     53     59     53
D45V7, multiclass
        clus
vv       5P LOSS MUTATED 5P LOSS WILD-TYPE
  CLUS_1               1                53
  CLUS_2               6                59
  CLUS_3               0                53
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P LOSS MUTATED        0      1      6
  5P LOSS WILD-TYPE     14     86     65
D45V8, multiclass
        clus
vv       5P LOSS MUTATED 5P LOSS WILD-TYPE
  CLUS_1               0                14
  CLUS_2               1                86
  CLUS_3               6                65

Clustering(46) Variable = 5Q LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5Q LOSS MUTATED        1      3      0      3
  5Q LOSS WILD-TYPE     32     65     37     31
D46V1, multiclass
        clus
vv       5Q LOSS MUTATED 5Q LOSS WILD-TYPE
  CLUS_1               1                32
  CLUS_2               3                65
  CLUS_3               0                37
  CLUS_4               3                31
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q LOSS MUTATED        1      6      0
  5Q LOSS WILD-TYPE     42     37     70
D46V2, multiclass
        clus
vv       5Q LOSS MUTATED 5Q LOSS WILD-TYPE
  CLUS_1               1                42
  CLUS_2               6                37
  CLUS_3               0                70
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5Q LOSS MUTATED        6      0      0      0
  5Q LOSS WILD-TYPE     52     49     31     23
D46V3, multiclass
        clus
vv       5Q LOSS MUTATED 5Q LOSS WILD-TYPE
  CLUS_1               6                52
  CLUS_2               0                49
  CLUS_3               0                31
  CLUS_4               0                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q LOSS MUTATED        6      0      0
  5Q LOSS WILD-TYPE     25     66     64
D46V4, multiclass
        clus
vv       5Q LOSS MUTATED 5Q LOSS WILD-TYPE
  CLUS_1               6                25
  CLUS_2               0                66
  CLUS_3               0                64
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q LOSS MUTATED        1      6      0
  5Q LOSS WILD-TYPE     55     56     54
D46V5, multiclass
        clus
vv       5Q LOSS MUTATED 5Q LOSS WILD-TYPE
  CLUS_1               1                55
  CLUS_2               6                56
  CLUS_3               0                54
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q LOSS MUTATED        0      1      6
  5Q LOSS WILD-TYPE     18     79     68
D46V6, multiclass
        clus
vv       5Q LOSS MUTATED 5Q LOSS WILD-TYPE
  CLUS_1               0                18
  CLUS_2               1                79
  CLUS_3               6                68
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q LOSS MUTATED        1      6      0
  5Q LOSS WILD-TYPE     53     59     53
D46V7, multiclass
        clus
vv       5Q LOSS MUTATED 5Q LOSS WILD-TYPE
  CLUS_1               1                53
  CLUS_2               6                59
  CLUS_3               0                53
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q LOSS MUTATED        0      1      6
  5Q LOSS WILD-TYPE     14     86     65
D46V8, multiclass
        clus
vv       5Q LOSS MUTATED 5Q LOSS WILD-TYPE
  CLUS_1               0                14
  CLUS_2               1                86
  CLUS_3               6                65

Clustering(47) Variable = 6P LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6P LOSS MUTATED        1      4      0      7
  6P LOSS WILD-TYPE     32     64     37     27
D47V1, multiclass
        clus
vv       6P LOSS MUTATED 6P LOSS WILD-TYPE
  CLUS_1               1                32
  CLUS_2               4                64
  CLUS_3               0                37
  CLUS_4               7                27
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P LOSS MUTATED        1      7      3
  6P LOSS WILD-TYPE     42     36     67
D47V2, multiclass
        clus
vv       6P LOSS MUTATED 6P LOSS WILD-TYPE
  CLUS_1               1                42
  CLUS_2               7                36
  CLUS_3               3                67
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6P LOSS MUTATED        8      3      0      0
  6P LOSS WILD-TYPE     50     46     31     23
D47V3, multiclass
        clus
vv       6P LOSS MUTATED 6P LOSS WILD-TYPE
  CLUS_1               8                50
  CLUS_2               3                46
  CLUS_3               0                31
  CLUS_4               0                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P LOSS MUTATED        6      2      3
  6P LOSS WILD-TYPE     25     64     61
D47V4, multiclass
        clus
vv       6P LOSS MUTATED 6P LOSS WILD-TYPE
  CLUS_1               6                25
  CLUS_2               2                64
  CLUS_3               3                61
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P LOSS MUTATED        2      5      5
  6P LOSS WILD-TYPE     54     57     49
D47V5, multiclass
        clus
vv       6P LOSS MUTATED 6P LOSS WILD-TYPE
  CLUS_1               2                54
  CLUS_2               5                57
  CLUS_3               5                49
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P LOSS MUTATED        0      5      7
  6P LOSS WILD-TYPE     18     75     67
D47V6, multiclass
        clus
vv       6P LOSS MUTATED 6P LOSS WILD-TYPE
  CLUS_1               0                18
  CLUS_2               5                75
  CLUS_3               7                67
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P LOSS MUTATED        3      5      4
  6P LOSS WILD-TYPE     51     60     49
D47V7, multiclass
        clus
vv       6P LOSS MUTATED 6P LOSS WILD-TYPE
  CLUS_1               3                51
  CLUS_2               5                60
  CLUS_3               4                49
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P LOSS MUTATED        1      4      7
  6P LOSS WILD-TYPE     13     83     64
D47V8, multiclass
        clus
vv       6P LOSS MUTATED 6P LOSS WILD-TYPE
  CLUS_1               1                13
  CLUS_2               4                83
  CLUS_3               7                64

Clustering(48) Variable = 6Q LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6Q LOSS MUTATED        1      4      0     10
  6Q LOSS WILD-TYPE     32     64     37     24
D48V1, multiclass
        clus
vv       6Q LOSS MUTATED 6Q LOSS WILD-TYPE
  CLUS_1               1                32
  CLUS_2               4                64
  CLUS_3               0                37
  CLUS_4              10                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q LOSS MUTATED        2     10      2
  6Q LOSS WILD-TYPE     41     33     68
D48V2, multiclass
        clus
vv       6Q LOSS MUTATED 6Q LOSS WILD-TYPE
  CLUS_1               2                41
  CLUS_2              10                33
  CLUS_3               2                68
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6Q LOSS MUTATED       11      2      1      0
  6Q LOSS WILD-TYPE     47     47     30     23
D48V3, multiclass
        clus
vv       6Q LOSS MUTATED 6Q LOSS WILD-TYPE
  CLUS_1              11                47
  CLUS_2               2                47
  CLUS_3               1                30
  CLUS_4               0                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q LOSS MUTATED        6      6      2
  6Q LOSS WILD-TYPE     25     60     62
D48V4, multiclass
        clus
vv       6Q LOSS MUTATED 6Q LOSS WILD-TYPE
  CLUS_1               6                25
  CLUS_2               6                60
  CLUS_3               2                62
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q LOSS MUTATED        5      7      3
  6Q LOSS WILD-TYPE     51     55     51
D48V5, multiclass
        clus
vv       6Q LOSS MUTATED 6Q LOSS WILD-TYPE
  CLUS_1               5                51
  CLUS_2               7                55
  CLUS_3               3                51
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q LOSS MUTATED        2      5      8
  6Q LOSS WILD-TYPE     16     75     66
D48V6, multiclass
        clus
vv       6Q LOSS MUTATED 6Q LOSS WILD-TYPE
  CLUS_1               2                16
  CLUS_2               5                75
  CLUS_3               8                66
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q LOSS MUTATED        5      7      3
  6Q LOSS WILD-TYPE     49     58     50
D48V7, multiclass
        clus
vv       6Q LOSS MUTATED 6Q LOSS WILD-TYPE
  CLUS_1               5                49
  CLUS_2               7                58
  CLUS_3               3                50
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q LOSS MUTATED        2      5      8
  6Q LOSS WILD-TYPE     12     82     63
D48V8, multiclass
        clus
vv       6Q LOSS MUTATED 6Q LOSS WILD-TYPE
  CLUS_1               2                12
  CLUS_2               5                82
  CLUS_3               8                63

Clustering(49) Variable = 8P LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8P LOSS MUTATED        0      1      1      4
  8P LOSS WILD-TYPE     33     67     36     30
D49V1, multiclass
        clus
vv       8P LOSS MUTATED 8P LOSS WILD-TYPE
  CLUS_1               0                33
  CLUS_2               1                67
  CLUS_3               1                36
  CLUS_4               4                30
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P LOSS MUTATED        1      1      2
  8P LOSS WILD-TYPE     42     42     68
D49V2, multiclass
        clus
vv       8P LOSS MUTATED 8P LOSS WILD-TYPE
  CLUS_1               1                42
  CLUS_2               1                42
  CLUS_3               2                68
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8P LOSS MUTATED        3      1      0      1
  8P LOSS WILD-TYPE     55     48     31     22
D49V3, multiclass
        clus
vv       8P LOSS MUTATED 8P LOSS WILD-TYPE
  CLUS_1               3                55
  CLUS_2               1                48
  CLUS_3               0                31
  CLUS_4               1                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P LOSS MUTATED        2      2      1
  8P LOSS WILD-TYPE     29     64     63
D49V4, multiclass
        clus
vv       8P LOSS MUTATED 8P LOSS WILD-TYPE
  CLUS_1               2                29
  CLUS_2               2                64
  CLUS_3               1                63
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P LOSS MUTATED        1      4      1
  8P LOSS WILD-TYPE     55     58     53
D49V5, multiclass
        clus
vv       8P LOSS MUTATED 8P LOSS WILD-TYPE
  CLUS_1               1                55
  CLUS_2               4                58
  CLUS_3               1                53
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P LOSS MUTATED        2      2      2
  8P LOSS WILD-TYPE     16     78     72
D49V6, multiclass
        clus
vv       8P LOSS MUTATED 8P LOSS WILD-TYPE
  CLUS_1               2                16
  CLUS_2               2                78
  CLUS_3               2                72
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P LOSS MUTATED        1      4      1
  8P LOSS WILD-TYPE     53     61     52
D49V7, multiclass
        clus
vv       8P LOSS MUTATED 8P LOSS WILD-TYPE
  CLUS_1               1                53
  CLUS_2               4                61
  CLUS_3               1                52
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P LOSS MUTATED        2      2      2
  8P LOSS WILD-TYPE     12     85     69
D49V8, multiclass
        clus
vv       8P LOSS MUTATED 8P LOSS WILD-TYPE
  CLUS_1               2                12
  CLUS_2               2                85
  CLUS_3               2                69

Clustering(50) Variable = 8Q LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8Q LOSS MUTATED        0      1      0      3
  8Q LOSS WILD-TYPE     33     67     37     31
D50V1, multiclass
        clus
vv       8Q LOSS MUTATED 8Q LOSS WILD-TYPE
  CLUS_1               0                33
  CLUS_2               1                67
  CLUS_3               0                37
  CLUS_4               3                31
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q LOSS MUTATED        1      1      1
  8Q LOSS WILD-TYPE     42     42     69
D50V2, multiclass
        clus
vv       8Q LOSS MUTATED 8Q LOSS WILD-TYPE
  CLUS_1               1                42
  CLUS_2               1                42
  CLUS_3               1                69
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8Q LOSS MUTATED        2      0      0      1
  8Q LOSS WILD-TYPE     56     49     31     22
D50V3, multiclass
        clus
vv       8Q LOSS MUTATED 8Q LOSS WILD-TYPE
  CLUS_1               2                56
  CLUS_2               0                49
  CLUS_3               0                31
  CLUS_4               1                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q LOSS MUTATED        2      1      0
  8Q LOSS WILD-TYPE     29     65     64
D50V4, multiclass
        clus
vv       8Q LOSS MUTATED 8Q LOSS WILD-TYPE
  CLUS_1               2                29
  CLUS_2               1                65
  CLUS_3               0                64
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q LOSS MUTATED        1      2      1
  8Q LOSS WILD-TYPE     55     60     53
D50V5, multiclass
        clus
vv       8Q LOSS MUTATED 8Q LOSS WILD-TYPE
  CLUS_1               1                55
  CLUS_2               2                60
  CLUS_3               1                53
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q LOSS MUTATED        1      2      1
  8Q LOSS WILD-TYPE     17     78     73
D50V6, multiclass
        clus
vv       8Q LOSS MUTATED 8Q LOSS WILD-TYPE
  CLUS_1               1                17
  CLUS_2               2                78
  CLUS_3               1                73
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q LOSS MUTATED        1      2      1
  8Q LOSS WILD-TYPE     53     63     52
D50V7, multiclass
        clus
vv       8Q LOSS MUTATED 8Q LOSS WILD-TYPE
  CLUS_1               1                53
  CLUS_2               2                63
  CLUS_3               1                52
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q LOSS MUTATED        1      2      1
  8Q LOSS WILD-TYPE     13     85     70
D50V8, multiclass
        clus
vv       8Q LOSS MUTATED 8Q LOSS WILD-TYPE
  CLUS_1               1                13
  CLUS_2               2                85
  CLUS_3               1                70

Clustering(51) Variable = 9P LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  9P LOSS MUTATED        1      7      0     14
  9P LOSS WILD-TYPE     32     61     37     20
D51V1, multiclass
        clus
vv       9P LOSS MUTATED 9P LOSS WILD-TYPE
  CLUS_1               1                32
  CLUS_2               7                61
  CLUS_3               0                37
  CLUS_4              14                20
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P LOSS MUTATED        5     14      0
  9P LOSS WILD-TYPE     38     29     70
D51V2, multiclass
        clus
vv       9P LOSS MUTATED 9P LOSS WILD-TYPE
  CLUS_1               5                38
  CLUS_2              14                29
  CLUS_3               0                70
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  9P LOSS MUTATED       19      0      1      1
  9P LOSS WILD-TYPE     39     49     30     22
D51V3, multiclass
        clus
vv       9P LOSS MUTATED 9P LOSS WILD-TYPE
  CLUS_1              19                39
  CLUS_2               0                49
  CLUS_3               1                30
  CLUS_4               1                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P LOSS MUTATED        9     11      1
  9P LOSS WILD-TYPE     22     55     63
D51V4, multiclass
        clus
vv       9P LOSS MUTATED 9P LOSS WILD-TYPE
  CLUS_1               9                22
  CLUS_2              11                55
  CLUS_3               1                63
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P LOSS MUTATED        4     14      4
  9P LOSS WILD-TYPE     52     48     50
D51V5, multiclass
        clus
vv       9P LOSS MUTATED 9P LOSS WILD-TYPE
  CLUS_1               4                52
  CLUS_2              14                48
  CLUS_3               4                50
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P LOSS MUTATED        4      4     14
  9P LOSS WILD-TYPE     14     76     60
D51V6, multiclass
        clus
vv       9P LOSS MUTATED 9P LOSS WILD-TYPE
  CLUS_1               4                14
  CLUS_2               4                76
  CLUS_3              14                60
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P LOSS MUTATED        3     13      6
  9P LOSS WILD-TYPE     51     52     47
D51V7, multiclass
        clus
vv       9P LOSS MUTATED 9P LOSS WILD-TYPE
  CLUS_1               3                51
  CLUS_2              13                52
  CLUS_3               6                47
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P LOSS MUTATED        3      5     14
  9P LOSS WILD-TYPE     11     82     57
D51V8, multiclass
        clus
vv       9P LOSS MUTATED 9P LOSS WILD-TYPE
  CLUS_1               3                11
  CLUS_2               5                82
  CLUS_3              14                57

Clustering(52) Variable = 9Q LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  9Q LOSS MUTATED        1      9      0     14
  9Q LOSS WILD-TYPE     32     59     37     20
D52V1, multiclass
        clus
vv       9Q LOSS MUTATED 9Q LOSS WILD-TYPE
  CLUS_1               1                32
  CLUS_2               9                59
  CLUS_3               0                37
  CLUS_4              14                20
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9Q LOSS MUTATED        6     15      0
  9Q LOSS WILD-TYPE     37     28     70
D52V2, multiclass
        clus
vv       9Q LOSS MUTATED 9Q LOSS WILD-TYPE
  CLUS_1               6                37
  CLUS_2              15                28
  CLUS_3               0                70
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  9Q LOSS MUTATED       21      0      1      1
  9Q LOSS WILD-TYPE     37     49     30     22
D52V3, multiclass
        clus
vv       9Q LOSS MUTATED 9Q LOSS WILD-TYPE
  CLUS_1              21                37
  CLUS_2               0                49
  CLUS_3               1                30
  CLUS_4               1                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9Q LOSS MUTATED       12     11      0
  9Q LOSS WILD-TYPE     19     55     64
D52V4, multiclass
        clus
vv       9Q LOSS MUTATED 9Q LOSS WILD-TYPE
  CLUS_1              12                19
  CLUS_2              11                55
  CLUS_3               0                64
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9Q LOSS MUTATED        4     16      4
  9Q LOSS WILD-TYPE     52     46     50
D52V5, multiclass
        clus
vv       9Q LOSS MUTATED 9Q LOSS WILD-TYPE
  CLUS_1               4                52
  CLUS_2              16                46
  CLUS_3               4                50
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9Q LOSS MUTATED        5      2     17
  9Q LOSS WILD-TYPE     13     78     57
D52V6, multiclass
        clus
vv       9Q LOSS MUTATED 9Q LOSS WILD-TYPE
  CLUS_1               5                13
  CLUS_2               2                78
  CLUS_3              17                57
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9Q LOSS MUTATED        4     15      5
  9Q LOSS WILD-TYPE     50     50     48
D52V7, multiclass
        clus
vv       9Q LOSS MUTATED 9Q LOSS WILD-TYPE
  CLUS_1               4                50
  CLUS_2              15                50
  CLUS_3               5                48
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9Q LOSS MUTATED        4      3     17
  9Q LOSS WILD-TYPE     10     84     54
D52V8, multiclass
        clus
vv       9Q LOSS MUTATED 9Q LOSS WILD-TYPE
  CLUS_1               4                10
  CLUS_2               3                84
  CLUS_3              17                54

Clustering(53) Variable = 10P LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10P LOSS MUTATED        0      1      0     11
  10P LOSS WILD-TYPE     33     67     37     23
D53V1, multiclass
        clus
vv       10P LOSS MUTATED 10P LOSS WILD-TYPE
  CLUS_1                0                 33
  CLUS_2                1                 67
  CLUS_3                0                 37
  CLUS_4               11                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P LOSS MUTATED        0      9      1
  10P LOSS WILD-TYPE     43     34     69
D53V2, multiclass
        clus
vv       10P LOSS MUTATED 10P LOSS WILD-TYPE
  CLUS_1                0                 43
  CLUS_2                9                 34
  CLUS_3                1                 69
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10P LOSS MUTATED       11      1      0      0
  10P LOSS WILD-TYPE     47     48     31     23
D53V3, multiclass
        clus
vv       10P LOSS MUTATED 10P LOSS WILD-TYPE
  CLUS_1               11                 47
  CLUS_2                1                 48
  CLUS_3                0                 31
  CLUS_4                0                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P LOSS MUTATED        2      8      2
  10P LOSS WILD-TYPE     29     58     62
D53V4, multiclass
        clus
vv       10P LOSS MUTATED 10P LOSS WILD-TYPE
  CLUS_1                2                 29
  CLUS_2                8                 58
  CLUS_3                2                 62
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P LOSS MUTATED        3      7      2
  10P LOSS WILD-TYPE     53     55     52
D53V5, multiclass
        clus
vv       10P LOSS MUTATED 10P LOSS WILD-TYPE
  CLUS_1                3                 53
  CLUS_2                7                 55
  CLUS_3                2                 52
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P LOSS MUTATED        6      1      5
  10P LOSS WILD-TYPE     12     79     69
D53V6, multiclass
        clus
vv       10P LOSS MUTATED 10P LOSS WILD-TYPE
  CLUS_1                6                 12
  CLUS_2                1                 79
  CLUS_3                5                 69
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P LOSS MUTATED        3      7      2
  10P LOSS WILD-TYPE     51     58     51
D53V7, multiclass
        clus
vv       10P LOSS MUTATED 10P LOSS WILD-TYPE
  CLUS_1                3                 51
  CLUS_2                7                 58
  CLUS_3                2                 51
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P LOSS MUTATED        5      2      5
  10P LOSS WILD-TYPE      9     85     66
D53V8, multiclass
        clus
vv       10P LOSS MUTATED 10P LOSS WILD-TYPE
  CLUS_1                5                  9
  CLUS_2                2                 85
  CLUS_3                5                 66

Clustering(54) Variable = 10Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10Q LOSS MUTATED        0      2      0     10
  10Q LOSS WILD-TYPE     33     66     37     24
D54V1, multiclass
        clus
vv       10Q LOSS MUTATED 10Q LOSS WILD-TYPE
  CLUS_1                0                 33
  CLUS_2                2                 66
  CLUS_3                0                 37
  CLUS_4               10                 24
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q LOSS MUTATED        0     10      1
  10Q LOSS WILD-TYPE     43     33     69
D54V2, multiclass
        clus
vv       10Q LOSS MUTATED 10Q LOSS WILD-TYPE
  CLUS_1                0                 43
  CLUS_2               10                 33
  CLUS_3                1                 69
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10Q LOSS MUTATED       11      1      0      0
  10Q LOSS WILD-TYPE     47     48     31     23
D54V3, multiclass
        clus
vv       10Q LOSS MUTATED 10Q LOSS WILD-TYPE
  CLUS_1               11                 47
  CLUS_2                1                 48
  CLUS_3                0                 31
  CLUS_4                0                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q LOSS MUTATED        2      9      1
  10Q LOSS WILD-TYPE     29     57     63
D54V4, multiclass
        clus
vv       10Q LOSS MUTATED 10Q LOSS WILD-TYPE
  CLUS_1                2                 29
  CLUS_2                9                 57
  CLUS_3                1                 63
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q LOSS MUTATED        3      8      1
  10Q LOSS WILD-TYPE     53     54     53
D54V5, multiclass
        clus
vv       10Q LOSS MUTATED 10Q LOSS WILD-TYPE
  CLUS_1                3                 53
  CLUS_2                8                 54
  CLUS_3                1                 53
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q LOSS MUTATED        6      0      6
  10Q LOSS WILD-TYPE     12     80     68
D54V6, multiclass
        clus
vv       10Q LOSS MUTATED 10Q LOSS WILD-TYPE
  CLUS_1                6                 12
  CLUS_2                0                 80
  CLUS_3                6                 68
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q LOSS MUTATED        3      8      1
  10Q LOSS WILD-TYPE     51     57     52
D54V7, multiclass
        clus
vv       10Q LOSS MUTATED 10Q LOSS WILD-TYPE
  CLUS_1                3                 51
  CLUS_2                8                 57
  CLUS_3                1                 52
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q LOSS MUTATED        5      1      6
  10Q LOSS WILD-TYPE      9     86     65
D54V8, multiclass
        clus
vv       10Q LOSS MUTATED 10Q LOSS WILD-TYPE
  CLUS_1                5                  9
  CLUS_2                1                 86
  CLUS_3                6                 65

Clustering(55) Variable = 11P LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11P LOSS MUTATED        0      3      0      7
  11P LOSS WILD-TYPE     33     65     37     27
D55V1, multiclass
        clus
vv       11P LOSS MUTATED 11P LOSS WILD-TYPE
  CLUS_1                0                 33
  CLUS_2                3                 65
  CLUS_3                0                 37
  CLUS_4                7                 27
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P LOSS MUTATED        0      7      2
  11P LOSS WILD-TYPE     43     36     68
D55V2, multiclass
        clus
vv       11P LOSS MUTATED 11P LOSS WILD-TYPE
  CLUS_1                0                 43
  CLUS_2                7                 36
  CLUS_3                2                 68
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11P LOSS MUTATED        8      1      0      0
  11P LOSS WILD-TYPE     50     48     31     23
D55V3, multiclass
        clus
vv       11P LOSS MUTATED 11P LOSS WILD-TYPE
  CLUS_1                8                 50
  CLUS_2                1                 48
  CLUS_3                0                 31
  CLUS_4                0                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P LOSS MUTATED        5      3      1
  11P LOSS WILD-TYPE     26     63     63
D55V4, multiclass
        clus
vv       11P LOSS MUTATED 11P LOSS WILD-TYPE
  CLUS_1                5                 26
  CLUS_2                3                 63
  CLUS_3                1                 63
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P LOSS MUTATED        2      7      1
  11P LOSS WILD-TYPE     54     55     53
D55V5, multiclass
        clus
vv       11P LOSS MUTATED 11P LOSS WILD-TYPE
  CLUS_1                2                 54
  CLUS_2                7                 55
  CLUS_3                1                 53
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P LOSS MUTATED        1      2      7
  11P LOSS WILD-TYPE     17     78     67
D55V6, multiclass
        clus
vv       11P LOSS MUTATED 11P LOSS WILD-TYPE
  CLUS_1                1                 17
  CLUS_2                2                 78
  CLUS_3                7                 67
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P LOSS MUTATED        2      6      2
  11P LOSS WILD-TYPE     52     59     51
D55V7, multiclass
        clus
vv       11P LOSS MUTATED 11P LOSS WILD-TYPE
  CLUS_1                2                 52
  CLUS_2                6                 59
  CLUS_3                2                 51
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P LOSS MUTATED        2      1      7
  11P LOSS WILD-TYPE     12     86     64
D55V8, multiclass
        clus
vv       11P LOSS MUTATED 11P LOSS WILD-TYPE
  CLUS_1                2                 12
  CLUS_2                1                 86
  CLUS_3                7                 64

Clustering(56) Variable = 11Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11Q LOSS MUTATED        0      4      0     10
  11Q LOSS WILD-TYPE     33     64     37     24
D56V1, multiclass
        clus
vv       11Q LOSS MUTATED 11Q LOSS WILD-TYPE
  CLUS_1                0                 33
  CLUS_2                4                 64
  CLUS_3                0                 37
  CLUS_4               10                 24
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q LOSS MUTATED        1     11      2
  11Q LOSS WILD-TYPE     42     32     68
D56V2, multiclass
        clus
vv       11Q LOSS MUTATED 11Q LOSS WILD-TYPE
  CLUS_1                1                 42
  CLUS_2               11                 32
  CLUS_3                2                 68
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11Q LOSS MUTATED       10      1      1      1
  11Q LOSS WILD-TYPE     48     48     30     22
D56V3, multiclass
        clus
vv       11Q LOSS MUTATED 11Q LOSS WILD-TYPE
  CLUS_1               10                 48
  CLUS_2                1                 48
  CLUS_3                1                 30
  CLUS_4                1                 22
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q LOSS MUTATED        5      7      1
  11Q LOSS WILD-TYPE     26     59     63
D56V4, multiclass
        clus
vv       11Q LOSS MUTATED 11Q LOSS WILD-TYPE
  CLUS_1                5                 26
  CLUS_2                7                 59
  CLUS_3                1                 63
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q LOSS MUTATED        5      8      1
  11Q LOSS WILD-TYPE     51     54     53
D56V5, multiclass
        clus
vv       11Q LOSS MUTATED 11Q LOSS WILD-TYPE
  CLUS_1                5                 51
  CLUS_2                8                 54
  CLUS_3                1                 53
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q LOSS MUTATED        3      3      8
  11Q LOSS WILD-TYPE     15     77     66
D56V6, multiclass
        clus
vv       11Q LOSS MUTATED 11Q LOSS WILD-TYPE
  CLUS_1                3                 15
  CLUS_2                3                 77
  CLUS_3                8                 66
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q LOSS MUTATED        5      7      2
  11Q LOSS WILD-TYPE     49     58     51
D56V7, multiclass
        clus
vv       11Q LOSS MUTATED 11Q LOSS WILD-TYPE
  CLUS_1                5                 49
  CLUS_2                7                 58
  CLUS_3                2                 51
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q LOSS MUTATED        3      3      8
  11Q LOSS WILD-TYPE     11     84     63
D56V8, multiclass
        clus
vv       11Q LOSS MUTATED 11Q LOSS WILD-TYPE
  CLUS_1                3                 11
  CLUS_2                3                 84
  CLUS_3                8                 63

Clustering(57) Variable = 13Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  13Q LOSS MUTATED        0      6      0     11
  13Q LOSS WILD-TYPE     33     62     37     23
D57V1, multiclass
        clus
vv       13Q LOSS MUTATED 13Q LOSS WILD-TYPE
  CLUS_1                0                 33
  CLUS_2                6                 62
  CLUS_3                0                 37
  CLUS_4               11                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q LOSS MUTATED        0     15      1
  13Q LOSS WILD-TYPE     43     28     69
D57V2, multiclass
        clus
vv       13Q LOSS MUTATED 13Q LOSS WILD-TYPE
  CLUS_1                0                 43
  CLUS_2               15                 28
  CLUS_3                1                 69
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  13Q LOSS MUTATED       16      1      0      0
  13Q LOSS WILD-TYPE     42     48     31     23
D57V3, multiclass
        clus
vv       13Q LOSS MUTATED 13Q LOSS WILD-TYPE
  CLUS_1               16                 42
  CLUS_2                1                 48
  CLUS_3                0                 31
  CLUS_4                0                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q LOSS MUTATED       10      6      1
  13Q LOSS WILD-TYPE     21     60     63
D57V4, multiclass
        clus
vv       13Q LOSS MUTATED 13Q LOSS WILD-TYPE
  CLUS_1               10                 21
  CLUS_2                6                 60
  CLUS_3                1                 63
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q LOSS MUTATED        2     12      3
  13Q LOSS WILD-TYPE     54     50     51
D57V5, multiclass
        clus
vv       13Q LOSS MUTATED 13Q LOSS WILD-TYPE
  CLUS_1                2                 54
  CLUS_2               12                 50
  CLUS_3                3                 51
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q LOSS MUTATED        1      2     14
  13Q LOSS WILD-TYPE     17     78     60
D57V6, multiclass
        clus
vv       13Q LOSS MUTATED 13Q LOSS WILD-TYPE
  CLUS_1                1                 17
  CLUS_2                2                 78
  CLUS_3               14                 60
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q LOSS MUTATED        2     11      4
  13Q LOSS WILD-TYPE     52     54     49
D57V7, multiclass
        clus
vv       13Q LOSS MUTATED 13Q LOSS WILD-TYPE
  CLUS_1                2                 52
  CLUS_2               11                 54
  CLUS_3                4                 49
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q LOSS MUTATED        1      3     13
  13Q LOSS WILD-TYPE     13     84     58
D57V8, multiclass
        clus
vv       13Q LOSS MUTATED 13Q LOSS WILD-TYPE
  CLUS_1                1                 13
  CLUS_2                3                 84
  CLUS_3               13                 58

Clustering(58) Variable = 14Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  14Q LOSS MUTATED        1     11      0     22
  14Q LOSS WILD-TYPE     32     57     37     12
D58V1, multiclass
        clus
vv       14Q LOSS MUTATED 14Q LOSS WILD-TYPE
  CLUS_1                1                 32
  CLUS_2               11                 57
  CLUS_3                0                 37
  CLUS_4               22                 12
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q LOSS MUTATED       10     14      6
  14Q LOSS WILD-TYPE     33     29     64
D58V2, multiclass
        clus
vv       14Q LOSS MUTATED 14Q LOSS WILD-TYPE
  CLUS_1               10                 33
  CLUS_2               14                 29
  CLUS_3                6                 64
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  14Q LOSS MUTATED       21      2      5      3
  14Q LOSS WILD-TYPE     37     47     26     20
D58V3, multiclass
        clus
vv       14Q LOSS MUTATED 14Q LOSS WILD-TYPE
  CLUS_1               21                 37
  CLUS_2                2                 47
  CLUS_3                5                 26
  CLUS_4                3                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q LOSS MUTATED       16     12      3
  14Q LOSS WILD-TYPE     15     54     61
D58V4, multiclass
        clus
vv       14Q LOSS MUTATED 14Q LOSS WILD-TYPE
  CLUS_1               16                 15
  CLUS_2               12                 54
  CLUS_3                3                 61
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q LOSS MUTATED        9     18      7
  14Q LOSS WILD-TYPE     47     44     47
D58V5, multiclass
        clus
vv       14Q LOSS MUTATED 14Q LOSS WILD-TYPE
  CLUS_1                9                 47
  CLUS_2               18                 44
  CLUS_3                7                 47
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q LOSS MUTATED        8      9     17
  14Q LOSS WILD-TYPE     10     71     57
D58V6, multiclass
        clus
vv       14Q LOSS MUTATED 14Q LOSS WILD-TYPE
  CLUS_1                8                 10
  CLUS_2                9                 71
  CLUS_3               17                 57
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q LOSS MUTATED        9     17      8
  14Q LOSS WILD-TYPE     45     48     45
D58V7, multiclass
        clus
vv       14Q LOSS MUTATED 14Q LOSS WILD-TYPE
  CLUS_1                9                 45
  CLUS_2               17                 48
  CLUS_3                8                 45
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q LOSS MUTATED        5     13     16
  14Q LOSS WILD-TYPE      9     74     55
D58V8, multiclass
        clus
vv       14Q LOSS MUTATED 14Q LOSS WILD-TYPE
  CLUS_1                5                  9
  CLUS_2               13                 74
  CLUS_3               16                 55

Clustering(59) Variable = 15Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  15Q LOSS MUTATED        1      7      0     11
  15Q LOSS WILD-TYPE     32     61     37     23
D59V1, multiclass
        clus
vv       15Q LOSS MUTATED 15Q LOSS WILD-TYPE
  CLUS_1                1                 32
  CLUS_2                7                 61
  CLUS_3                0                 37
  CLUS_4               11                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q LOSS MUTATED        7      9      2
  15Q LOSS WILD-TYPE     36     34     68
D59V2, multiclass
        clus
vv       15Q LOSS MUTATED 15Q LOSS WILD-TYPE
  CLUS_1                7                 36
  CLUS_2                9                 34
  CLUS_3                2                 68
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  15Q LOSS MUTATED       12      1      3      1
  15Q LOSS WILD-TYPE     46     48     28     22
D59V3, multiclass
        clus
vv       15Q LOSS MUTATED 15Q LOSS WILD-TYPE
  CLUS_1               12                 46
  CLUS_2                1                 48
  CLUS_3                3                 28
  CLUS_4                1                 22
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q LOSS MUTATED       13      3      1
  15Q LOSS WILD-TYPE     18     63     63
D59V4, multiclass
        clus
vv       15Q LOSS MUTATED 15Q LOSS WILD-TYPE
  CLUS_1               13                 18
  CLUS_2                3                 63
  CLUS_3                1                 63
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q LOSS MUTATED        4     11      4
  15Q LOSS WILD-TYPE     52     51     50
D59V5, multiclass
        clus
vv       15Q LOSS MUTATED 15Q LOSS WILD-TYPE
  CLUS_1                4                 52
  CLUS_2               11                 51
  CLUS_3                4                 50
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q LOSS MUTATED        1      7     11
  15Q LOSS WILD-TYPE     17     73     63
D59V6, multiclass
        clus
vv       15Q LOSS MUTATED 15Q LOSS WILD-TYPE
  CLUS_1                1                 17
  CLUS_2                7                 73
  CLUS_3               11                 63
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q LOSS MUTATED        3     11      5
  15Q LOSS WILD-TYPE     51     54     48
D59V7, multiclass
        clus
vv       15Q LOSS MUTATED 15Q LOSS WILD-TYPE
  CLUS_1                3                 51
  CLUS_2               11                 54
  CLUS_3                5                 48
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q LOSS MUTATED        2      6     11
  15Q LOSS WILD-TYPE     12     81     60
D59V8, multiclass
        clus
vv       15Q LOSS MUTATED 15Q LOSS WILD-TYPE
  CLUS_1                2                 12
  CLUS_2                6                 81
  CLUS_3               11                 60

Clustering(60) Variable = 16P LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16P LOSS MUTATED        0      1      0      3
  16P LOSS WILD-TYPE     33     67     37     31
D60V1, multiclass
        clus
vv       16P LOSS MUTATED 16P LOSS WILD-TYPE
  CLUS_1                0                 33
  CLUS_2                1                 67
  CLUS_3                0                 37
  CLUS_4                3                 31
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P LOSS MUTATED        0      4      0
  16P LOSS WILD-TYPE     43     39     70
D60V2, multiclass
        clus
vv       16P LOSS MUTATED 16P LOSS WILD-TYPE
  CLUS_1                0                 43
  CLUS_2                4                 39
  CLUS_3                0                 70
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16P LOSS MUTATED        4      0      0      0
  16P LOSS WILD-TYPE     54     49     31     23
D60V3, multiclass
        clus
vv       16P LOSS MUTATED 16P LOSS WILD-TYPE
  CLUS_1                4                 54
  CLUS_2                0                 49
  CLUS_3                0                 31
  CLUS_4                0                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P LOSS MUTATED        3      1      0
  16P LOSS WILD-TYPE     28     65     64
D60V4, multiclass
        clus
vv       16P LOSS MUTATED 16P LOSS WILD-TYPE
  CLUS_1                3                 28
  CLUS_2                1                 65
  CLUS_3                0                 64
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P LOSS MUTATED        1      2      1
  16P LOSS WILD-TYPE     55     60     53
D60V5, multiclass
        clus
vv       16P LOSS MUTATED 16P LOSS WILD-TYPE
  CLUS_1                1                 55
  CLUS_2                2                 60
  CLUS_3                1                 53
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P LOSS MUTATED        0      1      3
  16P LOSS WILD-TYPE     18     79     71
D60V6, multiclass
        clus
vv       16P LOSS MUTATED 16P LOSS WILD-TYPE
  CLUS_1                0                 18
  CLUS_2                1                 79
  CLUS_3                3                 71
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P LOSS MUTATED        1      2      1
  16P LOSS WILD-TYPE     53     63     52
D60V7, multiclass
        clus
vv       16P LOSS MUTATED 16P LOSS WILD-TYPE
  CLUS_1                1                 53
  CLUS_2                2                 63
  CLUS_3                1                 52
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P LOSS MUTATED        1      0      3
  16P LOSS WILD-TYPE     13     87     68
D60V8, multiclass
        clus
vv       16P LOSS MUTATED 16P LOSS WILD-TYPE
  CLUS_1                1                 13
  CLUS_2                0                 87
  CLUS_3                3                 68

Clustering(61) Variable = 16Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16Q LOSS MUTATED        0      1      0      4
  16Q LOSS WILD-TYPE     33     67     37     30
D61V1, multiclass
        clus
vv       16Q LOSS MUTATED 16Q LOSS WILD-TYPE
  CLUS_1                0                 33
  CLUS_2                1                 67
  CLUS_3                0                 37
  CLUS_4                4                 30
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q LOSS MUTATED        0      5      0
  16Q LOSS WILD-TYPE     43     38     70
D61V2, multiclass
        clus
vv       16Q LOSS MUTATED 16Q LOSS WILD-TYPE
  CLUS_1                0                 43
  CLUS_2                5                 38
  CLUS_3                0                 70
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16Q LOSS MUTATED        5      0      0      0
  16Q LOSS WILD-TYPE     53     49     31     23
D61V3, multiclass
        clus
vv       16Q LOSS MUTATED 16Q LOSS WILD-TYPE
  CLUS_1                5                 53
  CLUS_2                0                 49
  CLUS_3                0                 31
  CLUS_4                0                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q LOSS MUTATED        3      2      0
  16Q LOSS WILD-TYPE     28     64     64
D61V4, multiclass
        clus
vv       16Q LOSS MUTATED 16Q LOSS WILD-TYPE
  CLUS_1                3                 28
  CLUS_2                2                 64
  CLUS_3                0                 64
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q LOSS MUTATED        1      3      1
  16Q LOSS WILD-TYPE     55     59     53
D61V5, multiclass
        clus
vv       16Q LOSS MUTATED 16Q LOSS WILD-TYPE
  CLUS_1                1                 55
  CLUS_2                3                 59
  CLUS_3                1                 53
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q LOSS MUTATED        1      1      3
  16Q LOSS WILD-TYPE     17     79     71
D61V6, multiclass
        clus
vv       16Q LOSS MUTATED 16Q LOSS WILD-TYPE
  CLUS_1                1                 17
  CLUS_2                1                 79
  CLUS_3                3                 71
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q LOSS MUTATED        1      3      1
  16Q LOSS WILD-TYPE     53     62     52
D61V7, multiclass
        clus
vv       16Q LOSS MUTATED 16Q LOSS WILD-TYPE
  CLUS_1                1                 53
  CLUS_2                3                 62
  CLUS_3                1                 52
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q LOSS MUTATED        2      0      3
  16Q LOSS WILD-TYPE     12     87     68
D61V8, multiclass
        clus
vv       16Q LOSS MUTATED 16Q LOSS WILD-TYPE
  CLUS_1                2                 12
  CLUS_2                0                 87
  CLUS_3                3                 68

Clustering(62) Variable = 17P LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  17P LOSS MUTATED        0      3      0      5
  17P LOSS WILD-TYPE     33     65     37     29
D62V1, multiclass
        clus
vv       17P LOSS MUTATED 17P LOSS WILD-TYPE
  CLUS_1                0                 33
  CLUS_2                3                 65
  CLUS_3                0                 37
  CLUS_4                5                 29
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P LOSS MUTATED        0      7      0
  17P LOSS WILD-TYPE     43     36     70
D62V2, multiclass
        clus
vv       17P LOSS MUTATED 17P LOSS WILD-TYPE
  CLUS_1                0                 43
  CLUS_2                7                 36
  CLUS_3                0                 70
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  17P LOSS MUTATED        8      0      0      0
  17P LOSS WILD-TYPE     50     49     31     23
D62V3, multiclass
        clus
vv       17P LOSS MUTATED 17P LOSS WILD-TYPE
  CLUS_1                8                 50
  CLUS_2                0                 49
  CLUS_3                0                 31
  CLUS_4                0                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P LOSS MUTATED        5      3      0
  17P LOSS WILD-TYPE     26     63     64
D62V4, multiclass
        clus
vv       17P LOSS MUTATED 17P LOSS WILD-TYPE
  CLUS_1                5                 26
  CLUS_2                3                 63
  CLUS_3                0                 64
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P LOSS MUTATED        2      5      1
  17P LOSS WILD-TYPE     54     57     53
D62V5, multiclass
        clus
vv       17P LOSS MUTATED 17P LOSS WILD-TYPE
  CLUS_1                2                 54
  CLUS_2                5                 57
  CLUS_3                1                 53
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P LOSS MUTATED        2      1      5
  17P LOSS WILD-TYPE     16     79     69
D62V6, multiclass
        clus
vv       17P LOSS MUTATED 17P LOSS WILD-TYPE
  CLUS_1                2                 16
  CLUS_2                1                 79
  CLUS_3                5                 69
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P LOSS MUTATED        1      5      2
  17P LOSS WILD-TYPE     53     60     51
D62V7, multiclass
        clus
vv       17P LOSS MUTATED 17P LOSS WILD-TYPE
  CLUS_1                1                 53
  CLUS_2                5                 60
  CLUS_3                2                 51
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P LOSS MUTATED        2      1      5
  17P LOSS WILD-TYPE     12     86     66
D62V8, multiclass
        clus
vv       17P LOSS MUTATED 17P LOSS WILD-TYPE
  CLUS_1                2                 12
  CLUS_2                1                 86
  CLUS_3                5                 66

Clustering(63) Variable = 18P LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18P LOSS MUTATED        1     12      2     13
  18P LOSS WILD-TYPE     32     56     35     21
D63V1, multiclass
        clus
vv       18P LOSS MUTATED 18P LOSS WILD-TYPE
  CLUS_1                1                 32
  CLUS_2               12                 56
  CLUS_3                2                 35
  CLUS_4               13                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P LOSS MUTATED        4     18      4
  18P LOSS WILD-TYPE     39     25     66
D63V2, multiclass
        clus
vv       18P LOSS MUTATED 18P LOSS WILD-TYPE
  CLUS_1                4                 39
  CLUS_2               18                 25
  CLUS_3                4                 66
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18P LOSS MUTATED       20      0      2      2
  18P LOSS WILD-TYPE     38     49     29     21
D63V3, multiclass
        clus
vv       18P LOSS MUTATED 18P LOSS WILD-TYPE
  CLUS_1               20                 38
  CLUS_2                0                 49
  CLUS_3                2                 29
  CLUS_4                2                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P LOSS MUTATED        9     13      2
  18P LOSS WILD-TYPE     22     53     62
D63V4, multiclass
        clus
vv       18P LOSS MUTATED 18P LOSS WILD-TYPE
  CLUS_1                9                 22
  CLUS_2               13                 53
  CLUS_3                2                 62
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P LOSS MUTATED        9     15      4
  18P LOSS WILD-TYPE     47     47     50
D63V5, multiclass
        clus
vv       18P LOSS MUTATED 18P LOSS WILD-TYPE
  CLUS_1                9                 47
  CLUS_2               15                 47
  CLUS_3                4                 50
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P LOSS MUTATED        1     10     17
  18P LOSS WILD-TYPE     17     70     57
D63V6, multiclass
        clus
vv       18P LOSS MUTATED 18P LOSS WILD-TYPE
  CLUS_1                1                 17
  CLUS_2               10                 70
  CLUS_3               17                 57
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P LOSS MUTATED        8     14      6
  18P LOSS WILD-TYPE     46     51     47
D63V7, multiclass
        clus
vv       18P LOSS MUTATED 18P LOSS WILD-TYPE
  CLUS_1                8                 46
  CLUS_2               14                 51
  CLUS_3                6                 47
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P LOSS MUTATED        2     11     15
  18P LOSS WILD-TYPE     12     76     56
D63V8, multiclass
        clus
vv       18P LOSS MUTATED 18P LOSS WILD-TYPE
  CLUS_1                2                 12
  CLUS_2               11                 76
  CLUS_3               15                 56

Clustering(64) Variable = 18Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18Q LOSS MUTATED        1     12      2     15
  18Q LOSS WILD-TYPE     32     56     35     19
D64V1, multiclass
        clus
vv       18Q LOSS MUTATED 18Q LOSS WILD-TYPE
  CLUS_1                1                 32
  CLUS_2               12                 56
  CLUS_3                2                 35
  CLUS_4               15                 19
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q LOSS MUTATED        4     20      4
  18Q LOSS WILD-TYPE     39     23     66
D64V2, multiclass
        clus
vv       18Q LOSS MUTATED 18Q LOSS WILD-TYPE
  CLUS_1                4                 39
  CLUS_2               20                 23
  CLUS_3                4                 66
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18Q LOSS MUTATED       22      0      2      2
  18Q LOSS WILD-TYPE     36     49     29     21
D64V3, multiclass
        clus
vv       18Q LOSS MUTATED 18Q LOSS WILD-TYPE
  CLUS_1               22                 36
  CLUS_2                0                 49
  CLUS_3                2                 29
  CLUS_4                2                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q LOSS MUTATED       10     14      2
  18Q LOSS WILD-TYPE     21     52     62
D64V4, multiclass
        clus
vv       18Q LOSS MUTATED 18Q LOSS WILD-TYPE
  CLUS_1               10                 21
  CLUS_2               14                 52
  CLUS_3                2                 62
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q LOSS MUTATED        9     16      5
  18Q LOSS WILD-TYPE     47     46     49
D64V5, multiclass
        clus
vv       18Q LOSS MUTATED 18Q LOSS WILD-TYPE
  CLUS_1                9                 47
  CLUS_2               16                 46
  CLUS_3                5                 49
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q LOSS MUTATED        2     10     18
  18Q LOSS WILD-TYPE     16     70     56
D64V6, multiclass
        clus
vv       18Q LOSS MUTATED 18Q LOSS WILD-TYPE
  CLUS_1                2                 16
  CLUS_2               10                 70
  CLUS_3               18                 56
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q LOSS MUTATED        8     15      7
  18Q LOSS WILD-TYPE     46     50     46
D64V7, multiclass
        clus
vv       18Q LOSS MUTATED 18Q LOSS WILD-TYPE
  CLUS_1                8                 46
  CLUS_2               15                 50
  CLUS_3                7                 46
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q LOSS MUTATED        3     11     16
  18Q LOSS WILD-TYPE     11     76     55
D64V8, multiclass
        clus
vv       18Q LOSS MUTATED 18Q LOSS WILD-TYPE
  CLUS_1                3                 11
  CLUS_2               11                 76
  CLUS_3               16                 55

Clustering(65) Variable = 19P LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19P LOSS MUTATED        1      1      2      8
  19P LOSS WILD-TYPE     32     67     35     26
D65V1, multiclass
        clus
vv       19P LOSS MUTATED 19P LOSS WILD-TYPE
  CLUS_1                1                 32
  CLUS_2                1                 67
  CLUS_3                2                 35
  CLUS_4                8                 26
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P LOSS MUTATED        1      8      3
  19P LOSS WILD-TYPE     42     35     67
D65V2, multiclass
        clus
vv       19P LOSS MUTATED 19P LOSS WILD-TYPE
  CLUS_1                1                 42
  CLUS_2                8                 35
  CLUS_3                3                 67
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19P LOSS MUTATED        7      1      2      0
  19P LOSS WILD-TYPE     51     48     29     23
D65V3, multiclass
        clus
vv       19P LOSS MUTATED 19P LOSS WILD-TYPE
  CLUS_1                7                 51
  CLUS_2                1                 48
  CLUS_3                2                 29
  CLUS_4                0                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P LOSS MUTATED        1      8      1
  19P LOSS WILD-TYPE     30     58     63
D65V4, multiclass
        clus
vv       19P LOSS MUTATED 19P LOSS WILD-TYPE
  CLUS_1                1                 30
  CLUS_2                8                 58
  CLUS_3                1                 63
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P LOSS MUTATED        6      6      0
  19P LOSS WILD-TYPE     50     56     54
D65V5, multiclass
        clus
vv       19P LOSS MUTATED 19P LOSS WILD-TYPE
  CLUS_1                6                 50
  CLUS_2                6                 56
  CLUS_3                0                 54
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P LOSS MUTATED        4      4      4
  19P LOSS WILD-TYPE     14     76     70
D65V6, multiclass
        clus
vv       19P LOSS MUTATED 19P LOSS WILD-TYPE
  CLUS_1                4                 14
  CLUS_2                4                 76
  CLUS_3                4                 70
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P LOSS MUTATED        5      5      2
  19P LOSS WILD-TYPE     49     60     51
D65V7, multiclass
        clus
vv       19P LOSS MUTATED 19P LOSS WILD-TYPE
  CLUS_1                5                 49
  CLUS_2                5                 60
  CLUS_3                2                 51
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P LOSS MUTATED        4      4      4
  19P LOSS WILD-TYPE     10     83     67
D65V8, multiclass
        clus
vv       19P LOSS MUTATED 19P LOSS WILD-TYPE
  CLUS_1                4                 10
  CLUS_2                4                 83
  CLUS_3                4                 67

Clustering(66) Variable = 19Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19Q LOSS MUTATED        1      0      2      8
  19Q LOSS WILD-TYPE     32     68     35     26
D66V1, multiclass
        clus
vv       19Q LOSS MUTATED 19Q LOSS WILD-TYPE
  CLUS_1                1                 32
  CLUS_2                0                 68
  CLUS_3                2                 35
  CLUS_4                8                 26
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q LOSS MUTATED        1      7      3
  19Q LOSS WILD-TYPE     42     36     67
D66V2, multiclass
        clus
vv       19Q LOSS MUTATED 19Q LOSS WILD-TYPE
  CLUS_1                1                 42
  CLUS_2                7                 36
  CLUS_3                3                 67
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19Q LOSS MUTATED        7      1      1      0
  19Q LOSS WILD-TYPE     51     48     30     23
D66V3, multiclass
        clus
vv       19Q LOSS MUTATED 19Q LOSS WILD-TYPE
  CLUS_1                7                 51
  CLUS_2                1                 48
  CLUS_3                1                 30
  CLUS_4                0                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q LOSS MUTATED        2      6      1
  19Q LOSS WILD-TYPE     29     60     63
D66V4, multiclass
        clus
vv       19Q LOSS MUTATED 19Q LOSS WILD-TYPE
  CLUS_1                2                 29
  CLUS_2                6                 60
  CLUS_3                1                 63
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q LOSS MUTATED        5      6      0
  19Q LOSS WILD-TYPE     51     56     54
D66V5, multiclass
        clus
vv       19Q LOSS MUTATED 19Q LOSS WILD-TYPE
  CLUS_1                5                 51
  CLUS_2                6                 56
  CLUS_3                0                 54
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q LOSS MUTATED        3      3      5
  19Q LOSS WILD-TYPE     15     77     69
D66V6, multiclass
        clus
vv       19Q LOSS MUTATED 19Q LOSS WILD-TYPE
  CLUS_1                3                 15
  CLUS_2                3                 77
  CLUS_3                5                 69
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q LOSS MUTATED        5      5      1
  19Q LOSS WILD-TYPE     49     60     52
D66V7, multiclass
        clus
vv       19Q LOSS MUTATED 19Q LOSS WILD-TYPE
  CLUS_1                5                 49
  CLUS_2                5                 60
  CLUS_3                1                 52
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q LOSS MUTATED        3      3      5
  19Q LOSS WILD-TYPE     11     84     66
D66V8, multiclass
        clus
vv       19Q LOSS MUTATED 19Q LOSS WILD-TYPE
  CLUS_1                3                 11
  CLUS_2                3                 84
  CLUS_3                5                 66

Clustering(67) Variable = 21Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  21Q LOSS MUTATED        8      5      3     14
  21Q LOSS WILD-TYPE     25     63     34     20
D67V1, multiclass
        clus
vv       21Q LOSS MUTATED 21Q LOSS WILD-TYPE
  CLUS_1                8                 25
  CLUS_2                5                 63
  CLUS_3                3                 34
  CLUS_4               14                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q LOSS MUTATED        5     11     10
  21Q LOSS WILD-TYPE     38     32     60
D67V2, multiclass
        clus
vv       21Q LOSS MUTATED 21Q LOSS WILD-TYPE
  CLUS_1                5                 38
  CLUS_2               11                 32
  CLUS_3               10                 60
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  21Q LOSS MUTATED       12      9      5      2
  21Q LOSS WILD-TYPE     46     40     26     21
D67V3, multiclass
        clus
vv       21Q LOSS MUTATED 21Q LOSS WILD-TYPE
  CLUS_1               12                 46
  CLUS_2                9                 40
  CLUS_3                5                 26
  CLUS_4                2                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q LOSS MUTATED       10      9      9
  21Q LOSS WILD-TYPE     21     57     55
D67V4, multiclass
        clus
vv       21Q LOSS MUTATED 21Q LOSS WILD-TYPE
  CLUS_1               10                 21
  CLUS_2                9                 57
  CLUS_3                9                 55
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q LOSS MUTATED       10      9     11
  21Q LOSS WILD-TYPE     46     53     43
D67V5, multiclass
        clus
vv       21Q LOSS MUTATED 21Q LOSS WILD-TYPE
  CLUS_1               10                 46
  CLUS_2                9                 53
  CLUS_3               11                 43
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q LOSS MUTATED        6     12     12
  21Q LOSS WILD-TYPE     12     68     62
D67V6, multiclass
        clus
vv       21Q LOSS MUTATED 21Q LOSS WILD-TYPE
  CLUS_1                6                 12
  CLUS_2               12                 68
  CLUS_3               12                 62
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q LOSS MUTATED        8      9     13
  21Q LOSS WILD-TYPE     46     56     40
D67V7, multiclass
        clus
vv       21Q LOSS MUTATED 21Q LOSS WILD-TYPE
  CLUS_1                8                 46
  CLUS_2                9                 56
  CLUS_3               13                 40
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q LOSS MUTATED        3     16     11
  21Q LOSS WILD-TYPE     11     71     60
D67V8, multiclass
        clus
vv       21Q LOSS MUTATED 21Q LOSS WILD-TYPE
  CLUS_1                3                 11
  CLUS_2               16                 71
  CLUS_3               11                 60

Clustering(68) Variable = 22Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  22Q LOSS MUTATED        1     15      5     20
  22Q LOSS WILD-TYPE     32     53     32     14
D68V1, multiclass
        clus
vv       22Q LOSS MUTATED 22Q LOSS WILD-TYPE
  CLUS_1                1                 32
  CLUS_2               15                 53
  CLUS_3                5                 32
  CLUS_4               20                 14
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  22Q LOSS MUTATED        5     24      9
  22Q LOSS WILD-TYPE     38     19     61
D68V2, multiclass
        clus
vv       22Q LOSS MUTATED 22Q LOSS WILD-TYPE
  CLUS_1                5                 38
  CLUS_2               24                 19
  CLUS_3                9                 61
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  22Q LOSS MUTATED       29      5      4      0
  22Q LOSS WILD-TYPE     29     44     27     23
D68V3, multiclass
        clus
vv       22Q LOSS MUTATED 22Q LOSS WILD-TYPE
  CLUS_1               29                 29
  CLUS_2                5                 44
  CLUS_3                4                 27
  CLUS_4                0                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  22Q LOSS MUTATED       11     21      6
  22Q LOSS WILD-TYPE     20     45     58
D68V4, multiclass
        clus
vv       22Q LOSS MUTATED 22Q LOSS WILD-TYPE
  CLUS_1               11                 20
  CLUS_2               21                 45
  CLUS_3                6                 58
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  22Q LOSS MUTATED       17     16      8
  22Q LOSS WILD-TYPE     39     46     46
D68V5, multiclass
        clus
vv       22Q LOSS MUTATED 22Q LOSS WILD-TYPE
  CLUS_1               17                 39
  CLUS_2               16                 46
  CLUS_3                8                 46
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  22Q LOSS MUTATED       12     13     16
  22Q LOSS WILD-TYPE      6     67     58
D68V6, multiclass
        clus
vv       22Q LOSS MUTATED 22Q LOSS WILD-TYPE
  CLUS_1               12                  6
  CLUS_2               13                 67
  CLUS_3               16                 58
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  22Q LOSS MUTATED       18     16      7
  22Q LOSS WILD-TYPE     36     49     46
D68V7, multiclass
        clus
vv       22Q LOSS MUTATED 22Q LOSS WILD-TYPE
  CLUS_1               18                 36
  CLUS_2               16                 49
  CLUS_3                7                 46
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  22Q LOSS MUTATED        7     18     16
  22Q LOSS WILD-TYPE      7     69     55
D68V8, multiclass
        clus
vv       22Q LOSS MUTATED 22Q LOSS WILD-TYPE
  CLUS_1                7                  7
  CLUS_2               18                 69
  CLUS_3               16                 55

Clustering(69) Variable = XQ LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XQ LOSS MUTATED        2      4      1     13
  XQ LOSS WILD-TYPE     31     64     36     21
D69V1, multiclass
        clus
vv       XQ LOSS MUTATED XQ LOSS WILD-TYPE
  CLUS_1               2                31
  CLUS_2               4                64
  CLUS_3               1                36
  CLUS_4              13                21
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ LOSS MUTATED        1     13      3
  XQ LOSS WILD-TYPE     42     30     67
D69V2, multiclass
        clus
vv       XQ LOSS MUTATED XQ LOSS WILD-TYPE
  CLUS_1               1                42
  CLUS_2              13                30
  CLUS_3               3                67
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XQ LOSS MUTATED       16      2      0      0
  XQ LOSS WILD-TYPE     42     47     31     23
D69V3, multiclass
        clus
vv       XQ LOSS MUTATED XQ LOSS WILD-TYPE
  CLUS_1              16                42
  CLUS_2               2                47
  CLUS_3               0                31
  CLUS_4               0                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ LOSS MUTATED        7      8      3
  XQ LOSS WILD-TYPE     24     58     61
D69V4, multiclass
        clus
vv       XQ LOSS MUTATED XQ LOSS WILD-TYPE
  CLUS_1               7                24
  CLUS_2               8                58
  CLUS_3               3                61
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ LOSS MUTATED        5     11      4
  XQ LOSS WILD-TYPE     51     51     50
D69V5, multiclass
        clus
vv       XQ LOSS MUTATED XQ LOSS WILD-TYPE
  CLUS_1               5                51
  CLUS_2              11                51
  CLUS_3               4                50
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ LOSS MUTATED        5      6      9
  XQ LOSS WILD-TYPE     13     74     65
D69V6, multiclass
        clus
vv       XQ LOSS MUTATED XQ LOSS WILD-TYPE
  CLUS_1               5                13
  CLUS_2               6                74
  CLUS_3               9                65
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ LOSS MUTATED        5     11      4
  XQ LOSS WILD-TYPE     49     54     49
D69V7, multiclass
        clus
vv       XQ LOSS MUTATED XQ LOSS WILD-TYPE
  CLUS_1               5                49
  CLUS_2              11                54
  CLUS_3               4                49
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ LOSS MUTATED        5      6      9
  XQ LOSS WILD-TYPE      9     81     62
D69V8, multiclass
        clus
vv       XQ LOSS MUTATED XQ LOSS WILD-TYPE
  CLUS_1               5                 9
  CLUS_2               6                81
  CLUS_3               9                62
> q(save="no")
