[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"         "-nVNozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "dx" ""  
[1] "dx" " " 
[1] "dx" " " 
[1] "Time to Death"
[1] "AGE"
[1] "NEOPLASM.DISEASESTAGE"
[1] "PATHOLOGY.T.STAGE"
[1] "PATHOLOGY.N.STAGE"
[1] "PATHOLOGY.M.STAGE"
[1] "GENDER"
[1] "KARNOFSKY.PERFORMANCE.SCORE"
[1] "HISTOLOGICAL.TYPE"
[1] "RADIATIONS.RADIATION.REGIMENINDICATION"
[1] "NUMBERPACKYEARSSMOKED"
[1] "YEAROFTOBACCOSMOKINGONSET"
[1] "COMPLETENESS.OF.RESECTION"
[1] 6
                                       Clinical feature                        
Time to Death                          "Time to Death"                         
AGE                                    "AGE"                                   
NEOPLASM.DISEASESTAGE                  "NEOPLASM DISEASESTAGE"                 
PATHOLOGY.T.STAGE                      "PATHOLOGY T STAGE"                     
PATHOLOGY.N.STAGE                      "PATHOLOGY N STAGE"                     
PATHOLOGY.M.STAGE                      "PATHOLOGY M STAGE"                     
GENDER                                 "GENDER"                                
KARNOFSKY.PERFORMANCE.SCORE            "KARNOFSKY PERFORMANCE SCORE"           
HISTOLOGICAL.TYPE                      "HISTOLOGICAL TYPE"                     
RADIATIONS.RADIATION.REGIMENINDICATION "RADIATIONS RADIATION REGIMENINDICATION"
NUMBERPACKYEARSSMOKED                  "NUMBERPACKYEARSSMOKED"                 
YEAROFTOBACCOSMOKINGONSET              "YEAROFTOBACCOSMOKINGONSET"             
COMPLETENESS.OF.RESECTION              "COMPLETENESS OF RESECTION"             
                                       Statistical test           
Time to Death                          "Cox regression test"      
AGE                                    "Spearman correlation test"
NEOPLASM.DISEASESTAGE                  "ANOVA test"               
PATHOLOGY.T.STAGE                      "Spearman correlation test"
PATHOLOGY.N.STAGE                      "Spearman correlation test"
PATHOLOGY.M.STAGE                      "ANOVA test"               
GENDER                                 "t test"                   
KARNOFSKY.PERFORMANCE.SCORE            "Spearman correlation test"
HISTOLOGICAL.TYPE                      "ANOVA test"               
RADIATIONS.RADIATION.REGIMENINDICATION "t test"                   
NUMBERPACKYEARSSMOKED                  "Spearman correlation test"
YEAROFTOBACCOSMOKINGONSET              "Spearman correlation test"
COMPLETENESS.OF.RESECTION              "ANOVA test"               
                                       Significant genes
Time to Death                          "N=0"            
AGE                                    "N=11"           
NEOPLASM.DISEASESTAGE                  "N=18"           
PATHOLOGY.T.STAGE                      "N=0"            
PATHOLOGY.N.STAGE                      "N=0"            
PATHOLOGY.M.STAGE                      "N=13"           
GENDER                                 "N=7"            
KARNOFSKY.PERFORMANCE.SCORE            "N=233"          
HISTOLOGICAL.TYPE                      "N=127"          
RADIATIONS.RADIATION.REGIMENINDICATION "N=71"           
NUMBERPACKYEARSSMOKED                  "N=0"            
YEAROFTOBACCOSMOKINGONSET              "N=7"            
COMPLETENESS.OF.RESECTION              "N=916"          
                                       Associated with                   
Time to Death                          " "                               
AGE                                    "older"                           
NEOPLASM.DISEASESTAGE                  " "                               
PATHOLOGY.T.STAGE                      " "                               
PATHOLOGY.N.STAGE                      " "                               
PATHOLOGY.M.STAGE                      " "                               
GENDER                                 "male"                            
KARNOFSKY.PERFORMANCE.SCORE            "higher score"                    
HISTOLOGICAL.TYPE                      " "                               
RADIATIONS.RADIATION.REGIMENINDICATION "yes"                             
NUMBERPACKYEARSSMOKED                  " "                               
YEAROFTOBACCOSMOKINGONSET              "higher yearoftobaccosmokingonset"
COMPLETENESS.OF.RESECTION              " "                               
                                       &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
Time to Death                          " "                                                                                       
AGE                                    "N=2"                                                                                     
NEOPLASM.DISEASESTAGE                  " "                                                                                       
PATHOLOGY.T.STAGE                      " "                                                                                       
PATHOLOGY.N.STAGE                      " "                                                                                       
PATHOLOGY.M.STAGE                      " "                                                                                       
GENDER                                 "N=4"                                                                                     
KARNOFSKY.PERFORMANCE.SCORE            "N=208"                                                                                   
HISTOLOGICAL.TYPE                      " "                                                                                       
RADIATIONS.RADIATION.REGIMENINDICATION "N=69"                                                                                    
NUMBERPACKYEARSSMOKED                  " "                                                                                       
YEAROFTOBACCOSMOKINGONSET              "N=7"                                                                                     
COMPLETENESS.OF.RESECTION              " "                                                                                       
                                       Associated with                         
Time to Death                          " "                               " "   
AGE                                    "younger"                         "N=9" 
NEOPLASM.DISEASESTAGE                  " "                               " "   
PATHOLOGY.T.STAGE                      " "                               " "   
PATHOLOGY.N.STAGE                      " "                               " "   
PATHOLOGY.M.STAGE                      " "                               " "   
GENDER                                 "female"                          "N=3" 
KARNOFSKY.PERFORMANCE.SCORE            "lower score"                     "N=25"
HISTOLOGICAL.TYPE                      " "                               " "   
RADIATIONS.RADIATION.REGIMENINDICATION "no"                              "N=2" 
NUMBERPACKYEARSSMOKED                  " "                               " "   
YEAROFTOBACCOSMOKINGONSET              "lower yearoftobaccosmokingonset" "N=0" 
COMPLETENESS.OF.RESECTION              " "                               " "   
