[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"         "-nVNozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "dx" ""  
[1] "dx" " " 
[1] "dx" " " 
[1] "Time to Death"
[1] "AGE"
[1] "NEOPLASM.DISEASESTAGE"
[1] "PATHOLOGY.T.STAGE"
[1] "PATHOLOGY.N.STAGE"
[1] "PATHOLOGY.M.STAGE"
[1] "GENDER"
[1] "KARNOFSKY.PERFORMANCE.SCORE"
[1] "HISTOLOGICAL.TYPE"
[1] "RADIATIONS.RADIATION.REGIMENINDICATION"
[1] "NUMBERPACKYEARSSMOKED"
[1] "YEAROFTOBACCOSMOKINGONSET"
[1] "COMPLETENESS.OF.RESECTION"
[1] 6
                                       Clinical feature                        
Time to Death                          "Time to Death"                         
AGE                                    "AGE"                                   
NEOPLASM.DISEASESTAGE                  "NEOPLASM DISEASESTAGE"                 
PATHOLOGY.T.STAGE                      "PATHOLOGY T STAGE"                     
PATHOLOGY.N.STAGE                      "PATHOLOGY N STAGE"                     
PATHOLOGY.M.STAGE                      "PATHOLOGY M STAGE"                     
GENDER                                 "GENDER"                                
KARNOFSKY.PERFORMANCE.SCORE            "KARNOFSKY PERFORMANCE SCORE"           
HISTOLOGICAL.TYPE                      "HISTOLOGICAL TYPE"                     
RADIATIONS.RADIATION.REGIMENINDICATION "RADIATIONS RADIATION REGIMENINDICATION"
NUMBERPACKYEARSSMOKED                  "NUMBERPACKYEARSSMOKED"                 
YEAROFTOBACCOSMOKINGONSET              "YEAROFTOBACCOSMOKINGONSET"             
COMPLETENESS.OF.RESECTION              "COMPLETENESS OF RESECTION"             
                                       Statistical test           
Time to Death                          "Cox regression test"      
AGE                                    "Spearman correlation test"
NEOPLASM.DISEASESTAGE                  "ANOVA test"               
PATHOLOGY.T.STAGE                      "Spearman correlation test"
PATHOLOGY.N.STAGE                      "Spearman correlation test"
PATHOLOGY.M.STAGE                      "ANOVA test"               
GENDER                                 "t test"                   
KARNOFSKY.PERFORMANCE.SCORE            "Spearman correlation test"
HISTOLOGICAL.TYPE                      "ANOVA test"               
RADIATIONS.RADIATION.REGIMENINDICATION "t test"                   
NUMBERPACKYEARSSMOKED                  "Spearman correlation test"
YEAROFTOBACCOSMOKINGONSET              "Spearman correlation test"
COMPLETENESS.OF.RESECTION              "ANOVA test"               
                                       Significant genes
Time to Death                          "N=0"            
AGE                                    "N=4"            
NEOPLASM.DISEASESTAGE                  "N=5"            
PATHOLOGY.T.STAGE                      "N=6"            
PATHOLOGY.N.STAGE                      "N=1"            
PATHOLOGY.M.STAGE                      "N=11"           
GENDER                                 "N=47"           
KARNOFSKY.PERFORMANCE.SCORE            "N=8"            
HISTOLOGICAL.TYPE                      "N=21"           
RADIATIONS.RADIATION.REGIMENINDICATION "N=5"            
NUMBERPACKYEARSSMOKED                  "N=0"            
YEAROFTOBACCOSMOKINGONSET              "N=7"            
COMPLETENESS.OF.RESECTION              "N=4"            
                                       Associated with                   
Time to Death                          " "                               
AGE                                    "older"                           
NEOPLASM.DISEASESTAGE                  " "                               
PATHOLOGY.T.STAGE                      "higher stage"                    
PATHOLOGY.N.STAGE                      "higher stage"                    
PATHOLOGY.M.STAGE                      " "                               
GENDER                                 "male"                            
KARNOFSKY.PERFORMANCE.SCORE            "higher score"                    
HISTOLOGICAL.TYPE                      " "                               
RADIATIONS.RADIATION.REGIMENINDICATION "yes"                             
NUMBERPACKYEARSSMOKED                  " "                               
YEAROFTOBACCOSMOKINGONSET              "higher yearoftobaccosmokingonset"
COMPLETENESS.OF.RESECTION              " "                               
                                       &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
Time to Death                          " "                                                                                       
AGE                                    "N=4"                                                                                     
NEOPLASM.DISEASESTAGE                  " "                                                                                       
PATHOLOGY.T.STAGE                      "N=0"                                                                                     
PATHOLOGY.N.STAGE                      "N=1"                                                                                     
PATHOLOGY.M.STAGE                      " "                                                                                       
GENDER                                 "N=14"                                                                                    
KARNOFSKY.PERFORMANCE.SCORE            "N=7"                                                                                     
HISTOLOGICAL.TYPE                      " "                                                                                       
RADIATIONS.RADIATION.REGIMENINDICATION "N=5"                                                                                     
NUMBERPACKYEARSSMOKED                  " "                                                                                       
YEAROFTOBACCOSMOKINGONSET              "N=6"                                                                                     
COMPLETENESS.OF.RESECTION              " "                                                                                       
                                       Associated with                         
Time to Death                          " "                               " "   
AGE                                    "younger"                         "N=0" 
NEOPLASM.DISEASESTAGE                  " "                               " "   
PATHOLOGY.T.STAGE                      "lower stage"                     "N=6" 
PATHOLOGY.N.STAGE                      "lower stage"                     "N=0" 
PATHOLOGY.M.STAGE                      " "                               " "   
GENDER                                 "female"                          "N=33"
KARNOFSKY.PERFORMANCE.SCORE            "lower score"                     "N=1" 
HISTOLOGICAL.TYPE                      " "                               " "   
RADIATIONS.RADIATION.REGIMENINDICATION "no"                              "N=0" 
NUMBERPACKYEARSSMOKED                  " "                               " "   
YEAROFTOBACCOSMOKINGONSET              "lower yearoftobaccosmokingonset" "N=1" 
COMPLETENESS.OF.RESECTION              " "                               " "   
