		Clinical Features	CN_CNMF		METHLYATION_CNMF		RPPA_CNMF		RPPA_CHIERARCHICAL		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL		MIRSEQ_MATURE_CNMF		MIRSEQ_MATURE_CHIERARCHICAL	
	nCNV (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
1p	15 (5%)	263	0.00074931	0.271	0.0048742	1	0.0025477	0.892	0.084967	1	0.061419	1	0.010845	1	0.35052	1	0.58783	1	0.35133	1	0.77672	1
1q	12 (4%)	266	0.037924	1	0.018553	1	0.0085914	1	0.1262	1	0.16295	1	0.032898	1	0.619	1	0.92328	1	0.86242	1	0.73972	1
2p	7 (3%)	271	0.035054	1	0.12166	1	0.78437	1	0.63505	1	0.4844	1	0.12351	1	0.21846	1	0.55879	1	0.11024	1	0.63879	1
2q	7 (3%)	271	0.0030529	1	0.50385	1	0.78437	1	0.63505	1	0.9152	1	0.45431	1	0.30904	1	0.55879	1	0.11024	1	0.63879	1
3p	23 (8%)	255	0.00039532	0.144	0.12044	1	0.18161	1	0.69611	1	0.53617	1	0.016875	1	0.12948	1	1	1	0.75177	1	0.42258	1
3q	27 (10%)	251	1.0772e-05	0.00407	0.079202	1	0.063325	1	0.25583	1	0.20536	1	0.0072453	1	0.34451	1	0.94724	1	0.93808	1	0.60957	1
4p	13 (5%)	265	0.010358	1	0.10484	1	0.65763	1	0.58549	1	0.049589	1	0.18557	1	0.40052	1	0.063988	1	0.39697	1	0.49098	1
4q	9 (3%)	269	0.15526	1	0.29497	1	1	1	0.1451	1	0.18887	1	0.48892	1	0.75629	1	0.27689	1	0.63704	1	0.36246	1
5p	10 (4%)	268	7.548e-06	0.00286	0.035335	1	0.22754	1	0.63539	1	0.17458	1	0.093104	1	0.35601	1	0.14134	1	0.25697	1	0.27688	1
5q	11 (4%)	267	4.2653e-06	0.00163	0.192	1	0.22754	1	0.26439	1	0.30182	1	0.17327	1	0.51936	1	0.22413	1	1	1	0.76018	1
6p	11 (4%)	267	4.2653e-06	0.00163	0.014534	1	0.14965	1	0.1183	1	0.06963	1	0.0017896	0.632	0.63974	1	0.73973	1	0.86242	1	0.9295	1
6q	18 (6%)	260	2.1959e-07	8.52e-05	0.0012793	0.455	0.13751	1	0.35853	1	0.025642	1	0.0020319	0.713	0.42335	1	0.51773	1	0.54341	1	0.65348	1
7p	46 (17%)	232	5.5322e-07	0.000214	1.0491e-06	0.000405	0.4133	1	0.56093	1	6.6096e-05	0.0245	0.021888	1	0.41817	1	0.96163	1	0.72994	1	0.90172	1
7q	43 (15%)	235	4.3593e-06	0.00166	1.7308e-06	0.000666	0.58591	1	0.55136	1	8.814e-05	0.0324	0.057204	1	0.41532	1	0.82945	1	0.72751	1	0.87023	1
8p	119 (43%)	159	1.7927e-17	7.15e-15	5.4601e-11	2.16e-08	0.064207	1	0.071354	1	2.1307e-06	0.000818	2.5477e-06	0.000976	0.00010919	0.04	0.94986	1	0.66909	1	0.88996	1
8q	70 (25%)	208	1.076e-22	4.3e-20	3.4638e-05	0.0129	0.013833	1	0.018606	1	0.010556	1	1.6833e-05	0.00633	0.058499	1	0.21773	1	0.48765	1	0.55299	1
9p	22 (8%)	256	1.2288e-07	4.78e-05	0.54362	1	0.071457	1	0.183	1	0.45676	1	0.70119	1	0.67658	1	0.52714	1	0.62829	1	0.59685	1
9q	25 (9%)	253	5.1905e-08	2.02e-05	0.30204	1	0.03766	1	0.077927	1	0.75675	1	0.31784	1	0.78342	1	0.30896	1	0.52949	1	0.65233	1
10p	25 (9%)	253	2.3648e-08	9.25e-06	0.0012555	0.448	0.0034524	1	0.010033	1	0.028366	1	0.0010369	0.372	0.0676	1	0.047926	1	0.016807	1	0.091608	1
10q	30 (11%)	248	2.1099e-10	8.31e-08	0.007102	1	0.0015803	0.561	0.0057257	1	0.13204	1	0.002927	1	0.18812	1	0.188	1	0.023974	1	0.11558	1
11p	10 (4%)	268	0.0034624	1	0.60924	1	0.76789	1	0.58549	1	0.49545	1	0.45716	1	0.92982	1	0.91375	1	1	1	0.83602	1
11q	10 (4%)	268	0.0034624	1	0.60924	1	0.89585	1	0.56384	1	0.49545	1	0.45716	1	0.92982	1	0.91375	1	1	1	0.83602	1
12p	28 (10%)	250	0.001186	0.425	0.11619	1	0.071838	1	0.50655	1	0.19507	1	0.17603	1	0.88912	1	0.20182	1	0.45655	1	0.77576	1
12q	16 (6%)	262	7.1573e-05	0.0265	0.66733	1	0.26661	1	0.48665	1	0.50876	1	0.26619	1	0.83724	1	1	1	0.88813	1	0.94286	1
13q	41 (15%)	237	2.0649e-08	8.09e-06	0.22466	1	0.27193	1	0.34217	1	0.80927	1	0.24442	1	0.89007	1	1	1	0.84335	1	0.87929	1
14q	15 (5%)	263	0.011832	1	0.044962	1	0.20942	1	0.1262	1	0.11049	1	0.07223	1	0.0084976	1	0.094477	1	0.037775	1	0.17355	1
15q	19 (7%)	259	4.0062e-05	0.0149	0.063947	1	0.0087614	1	0.021154	1	0.48746	1	0.089516	1	0.37984	1	0.35213	1	0.17642	1	0.32108	1
16p	30 (11%)	248	1.1144e-05	0.0042	0.064671	1	0.23009	1	0.27467	1	0.71025	1	0.40571	1	0.24424	1	0.32993	1	0.086273	1	0.20582	1
16q	58 (21%)	220	3.1519e-12	1.25e-09	0.0030969	1	0.31344	1	0.16286	1	0.055309	1	0.032488	1	0.52915	1	1	1	0.21056	1	0.50994	1
17p	40 (14%)	238	4.1932e-15	1.67e-12	0.016175	1	0.01531	1	0.017337	1	0.0034921	1	0.00010476	0.0384	0.85804	1	0.82325	1	0.83221	1	0.71575	1
17q	11 (4%)	267	2.5681e-05	0.0096	0.24546	1	0.22754	1	0.1183	1	0.06963	1	0.31248	1	0.90635	1	1	1	0.61218	1	0.6659	1
18p	43 (15%)	235	4.2472e-10	1.67e-07	0.10048	1	0.095395	1	0.071113	1	0.087408	1	0.076301	1	0.66151	1	0.72802	1	0.29491	1	0.41444	1
18q	54 (19%)	224	7.3213e-11	2.89e-08	0.065186	1	0.028344	1	0.016163	1	0.0088619	1	0.029296	1	0.84737	1	0.82925	1	0.83258	1	0.86798	1
19p	12 (4%)	266	0.00093047	0.336	0.42783	1	0.24038	1	0.44539	1	0.28613	1	0.60319	1	0.42557	1	0.34673	1	0.33045	1	0.36246	1
19q	13 (5%)	265	0.00034905	0.127	0.3659	1	0.29692	1	0.49508	1	0.2317	1	0.39935	1	0.34183	1	0.38552	1	0.27932	1	0.3095	1
20p	16 (6%)	262	0.084693	1	0.0017583	0.622	0.35572	1	0.41531	1	0.22109	1	0.056874	1	0.49586	1	0.12688	1	0.63793	1	1	1
20q	14 (5%)	264	0.0019579	0.689	0.0098489	1	0.60165	1	0.69621	1	0.15835	1	0.2025	1	0.94481	1	0.50111	1	0.83555	1	0.57984	1
21q	15 (5%)	263	0.00016591	0.0606	0.044962	1	0.20942	1	0.1262	1	0.38445	1	0.12775	1	0.60987	1	1	1	0.77323	1	0.34907	1
22q	20 (7%)	258	7.2196e-05	0.0266	0.16921	1	0.26405	1	0.61923	1	0.46745	1	0.10712	1	0.59745	1	0.64388	1	0.38504	1	0.47915	1
xq	19 (7%)	259	1.7361e-05	0.00651	0.00094972	0.342	0.19256	1	0.2354	1	0.0026156	0.913	0.01913	1	0.18167	1	0.17273	1	0.090585	1	0.1127	1
