[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"         "-nVNozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "dx" ""  
[1] "dx" " " 
[1] "dx" " " 
[1] "Time to Death"
[1] "AGE"
[1] "NEOPLASM.DISEASESTAGE"
[1] "PATHOLOGY.T.STAGE"
[1] "PATHOLOGY.N.STAGE"
[1] "PATHOLOGY.M.STAGE"
[1] "GENDER"
[1] "HISTOLOGICAL.TYPE"
[1] "RADIATIONS.RADIATION.REGIMENINDICATION"
[1] "COMPLETENESS.OF.RESECTION"
[1] "NUMBER.OF.LYMPH.NODES"
[1] 6
                                       Clinical feature                        
Time to Death                          "Time to Death"                         
AGE                                    "AGE"                                   
NEOPLASM.DISEASESTAGE                  "NEOPLASM DISEASESTAGE"                 
PATHOLOGY.T.STAGE                      "PATHOLOGY T STAGE"                     
PATHOLOGY.N.STAGE                      "PATHOLOGY N STAGE"                     
PATHOLOGY.M.STAGE                      "PATHOLOGY M STAGE"                     
GENDER                                 "GENDER"                                
HISTOLOGICAL.TYPE                      "HISTOLOGICAL TYPE"                     
RADIATIONS.RADIATION.REGIMENINDICATION "RADIATIONS RADIATION REGIMENINDICATION"
COMPLETENESS.OF.RESECTION              "COMPLETENESS OF RESECTION"             
NUMBER.OF.LYMPH.NODES                  "NUMBER OF LYMPH NODES"                 
                                       Statistical test           
Time to Death                          "Cox regression test"      
AGE                                    "Spearman correlation test"
NEOPLASM.DISEASESTAGE                  "ANOVA test"               
PATHOLOGY.T.STAGE                      "Spearman correlation test"
PATHOLOGY.N.STAGE                      "Spearman correlation test"
PATHOLOGY.M.STAGE                      "ANOVA test"               
GENDER                                 "t test"                   
HISTOLOGICAL.TYPE                      "t test"                   
RADIATIONS.RADIATION.REGIMENINDICATION "t test"                   
COMPLETENESS.OF.RESECTION              "ANOVA test"               
NUMBER.OF.LYMPH.NODES                  "Spearman correlation test"
                                       Significant genes
Time to Death                          "N=0"            
AGE                                    "N=0"            
NEOPLASM.DISEASESTAGE                  "N=274"          
PATHOLOGY.T.STAGE                      "N=0"            
PATHOLOGY.N.STAGE                      "N=0"            
PATHOLOGY.M.STAGE                      "N=7"            
GENDER                                 "N=3"            
HISTOLOGICAL.TYPE                      "N=64"           
RADIATIONS.RADIATION.REGIMENINDICATION "N=94"           
COMPLETENESS.OF.RESECTION              "N=38"           
NUMBER.OF.LYMPH.NODES                  "N=0"            
                                       Associated with                 
Time to Death                          " "                             
AGE                                    " "                             
NEOPLASM.DISEASESTAGE                  " "                             
PATHOLOGY.T.STAGE                      " "                             
PATHOLOGY.N.STAGE                      " "                             
PATHOLOGY.M.STAGE                      " "                             
GENDER                                 "male"                          
HISTOLOGICAL.TYPE                      "rectal mucinous adenocarcinoma"
RADIATIONS.RADIATION.REGIMENINDICATION "yes"                           
COMPLETENESS.OF.RESECTION              " "                             
NUMBER.OF.LYMPH.NODES                  " "                             
                                       &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
Time to Death                          " "                                                                                       
AGE                                    " "                                                                                       
NEOPLASM.DISEASESTAGE                  " "                                                                                       
PATHOLOGY.T.STAGE                      " "                                                                                       
PATHOLOGY.N.STAGE                      " "                                                                                       
PATHOLOGY.M.STAGE                      " "                                                                                       
GENDER                                 "N=2"                                                                                     
HISTOLOGICAL.TYPE                      "N=37"                                                                                    
RADIATIONS.RADIATION.REGIMENINDICATION "N=90"                                                                                    
COMPLETENESS.OF.RESECTION              " "                                                                                       
NUMBER.OF.LYMPH.NODES                  " "                                                                                       
                                       Associated with               
Time to Death                          " "                     " "   
AGE                                    " "                     " "   
NEOPLASM.DISEASESTAGE                  " "                     " "   
PATHOLOGY.T.STAGE                      " "                     " "   
PATHOLOGY.N.STAGE                      " "                     " "   
PATHOLOGY.M.STAGE                      " "                     " "   
GENDER                                 "female"                "N=1" 
HISTOLOGICAL.TYPE                      "rectal adenocarcinoma" "N=27"
RADIATIONS.RADIATION.REGIMENINDICATION "no"                    "N=4" 
COMPLETENESS.OF.RESECTION              " "                     " "   
NUMBER.OF.LYMPH.NODES                  " "                     " "   
