Unique Name	Descriptor	Wide Peak Limits	Peak Limits	Region Limits	q values	Residual q values after removing segments shared with higher peaks	Broad or Focal	Amplitude Threshold	TCGA-B7-5816-01A-21D-1598-02	TCGA-B7-5818-01A-11D-1598-02	TCGA-BR-4183-01A-02D-1128-02	TCGA-BR-4184-01A-01D-1128-02	TCGA-BR-4187-01A-01D-1128-02	TCGA-BR-4188-01A-01D-1128-02	TCGA-BR-4191-01A-02D-1128-02	TCGA-BR-4201-01A-01D-1128-02	TCGA-BR-4253-01A-01D-1128-02	TCGA-BR-4255-01A-01D-1128-02	TCGA-BR-4256-01A-01D-1128-02	TCGA-BR-4257-01A-01D-1128-02	TCGA-BR-4267-01A-01D-1128-02	TCGA-BR-4279-01A-01D-1128-02	TCGA-BR-4280-01A-01D-1128-02	TCGA-BR-4292-01A-01D-1128-02	TCGA-BR-4294-01A-01D-1128-02	TCGA-BR-4357-01A-01D-1154-02	TCGA-BR-4363-01A-01D-1154-02	TCGA-BR-4366-01A-01D-1154-02	TCGA-BR-4367-01A-01D-1154-02	TCGA-BR-4368-01A-01D-1154-02	TCGA-BR-4369-01A-01D-1154-02	TCGA-BR-4370-01A-01D-1154-02	TCGA-BR-6452-01A-12D-1798-02	TCGA-BR-6453-01A-11D-1798-02	TCGA-BR-6454-01A-11D-1798-02	TCGA-BR-6455-01A-11D-1798-02	TCGA-BR-6456-01A-11D-1798-02	TCGA-BR-6457-01A-21D-1798-02	TCGA-BR-6458-01A-11D-1798-02	TCGA-BR-6564-01A-12D-1880-02	TCGA-BR-6565-01A-11D-1798-02	TCGA-BR-6566-01A-11D-1798-02	TCGA-BR-6705-01A-12D-1880-02	TCGA-BR-6706-01A-11D-1880-02	TCGA-BR-6707-01A-11D-1880-02	TCGA-BR-6710-01A-11D-1880-02	TCGA-BR-6801-01A-11D-1880-02	TCGA-BR-6802-01A-11D-1880-02	TCGA-BR-6803-01A-11D-1880-02	TCGA-BR-6852-01A-11D-1880-02	TCGA-CD-5798-01A-11D-1598-02	TCGA-CD-5799-01A-11D-1598-02	TCGA-CD-5800-01A-11D-1598-02	TCGA-CD-5801-01A-11D-1598-02	TCGA-CD-5802-01A-11D-1598-02	TCGA-CD-5803-01A-11D-1598-02	TCGA-CD-5813-01A-11D-1598-02	TCGA-CG-4300-01A-01D-1154-02	TCGA-CG-4301-01A-01D-A326-26	TCGA-CG-4304-01A-01D-A326-26	TCGA-CG-4305-01A-01D-1154-02	TCGA-CG-4306-01A-01D-1154-02	TCGA-CG-4436-01A-01D-1154-02	TCGA-CG-4437-01A-01D-1798-02	TCGA-CG-4440-01A-01D-A326-26	TCGA-CG-4441-01A-01D-1798-02	TCGA-CG-4442-01A-01D-1154-02	TCGA-CG-4443-01A-01D-1154-02	TCGA-CG-4444-01A-01D-A326-26	TCGA-CG-4455-01A-01D-1154-02	TCGA-CG-4462-01A-01D-1154-02	TCGA-CG-4465-01A-01D-1154-02	TCGA-CG-4466-01A-01D-1154-02	TCGA-CG-4469-01A-01D-1154-02	TCGA-CG-4472-01A-01D-1154-02	TCGA-CG-4474-01A-02D-1154-02	TCGA-CG-4475-01A-01D-1154-02	TCGA-CG-4476-01A-01D-1154-02	TCGA-CG-4477-01A-01D-1154-02	TCGA-CG-5717-01A-11D-1598-02	TCGA-CG-5718-01A-11D-1598-02	TCGA-CG-5719-01A-11D-1598-02	TCGA-CG-5720-01A-11D-1598-02	TCGA-CG-5721-01A-11D-1598-02	TCGA-CG-5722-01A-21D-1598-02	TCGA-CG-5723-01A-11D-1598-02	TCGA-CG-5724-01A-11D-1598-02	TCGA-CG-5725-01A-11D-1598-02	TCGA-CG-5726-01A-11D-1598-02	TCGA-CG-5727-01A-11D-1598-02	TCGA-CG-5730-01A-11D-1598-02	TCGA-CG-5732-01A-11D-1598-02	TCGA-CG-5733-01A-11D-1598-02	TCGA-CG-5734-01A-11D-1598-02	TCGA-D7-5577-01A-01D-1598-02	TCGA-D7-5578-01A-01D-1598-02	TCGA-D7-5579-01A-01D-1598-02	TCGA-D7-6518-01A-11D-1798-02	TCGA-D7-6519-01A-11D-1798-02	TCGA-D7-6520-01A-11D-1798-02	TCGA-D7-6521-01A-11D-1798-02	TCGA-D7-6522-01A-11D-1798-02	TCGA-D7-6524-01A-11D-1798-02	TCGA-D7-6525-01A-11D-1798-02	TCGA-D7-6526-01A-11D-1798-02	TCGA-D7-6527-01A-11D-1798-02	TCGA-D7-6528-01A-11D-1798-02	TCGA-D7-6815-01A-11D-1880-02	TCGA-D7-6817-01A-11D-1880-02	TCGA-D7-6818-01A-11D-1880-02	TCGA-D7-6820-01A-11D-1880-02	TCGA-D7-6822-01A-11D-1880-02	TCGA-EQ-5647-01A-01D-1598-02	TCGA-F1-6874-01A-11D-1880-02	
Amplification Peak  1	6p21.1  	chr6:41317102-44379101(probes 6539:6590)        	chr6:43599396-43656923(probes 6572:6575)        	chr6:43599396-44416589(probes 6572:6592)        	0.062329	   0.062329		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	2	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	2	2	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	1	0	1	0	1	0	0	
Amplification Peak  2	7p11.2  	chr7:54995267-55593325(probes 7720:7739)        	chr7:55079144-55487227(probes 7723:7734)        	chr7:55036384-55777577(probes 7721:7743)        	0.0034831	  0.0034831		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	1	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	0	0	1	0	1	0	2	0	1	1	0	2	0	0	2	0	0	0	0	0	0	1	0	0	1	0	0	1	1	0	1	0	1	0	0	0	0	0	0	0	1	1	1	1	1	1	0	0	1	0	0	0	0	0	1	0	1	1	0	0	1	0	0	0	0	1	0	2	1	0	0	0	1	0	1	0	0	0	0	1	0	1	
Amplification Peak  3	7q21.2  	chr7:90901353-96204218(probes 7998:8077)        	chr7:91788888-92079923(probes 8015:8016)        	chr7:90376874-99219242(probes 7983:8115)        	6.9315e-05	 6.9315e-05		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	2	0	1	0	2	2	1	1	0	0	0	0	2	0	0	0	0	2	0	1	0	0	1	0	2	1	1	0	2	0	2	0	0	0	0	2	0	0	0	1	2	1	2	0	0	0	1	0	0	0	0	0	1	1	1	2	0	0	1	0	0	1	0	1	0	0	2	0	0	1	2	0	1	1	1	0	0	0	0	1	
Amplification Peak  4	8p23.1  	chr8:10975654-12724285(probes 8688:8700)        	chr8:11552479-12724284(probes 8697:8699)        	chr8:8661010-14022484(probes 8669:8704)          	0.00017582	 0.00017582		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	1	0	2	0	0	0	0	1	0	2	0	1	0	0	0	2	0	0	0	1	0	1	0	1	2	1	0	1	0	2	2	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	1	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	2	1	0	0	0	0	0	0	0	0	1	0	0	0	0	2	2	0	0	
Amplification Peak  5	8q24.21 	chr8:128070146-128877354(probes 9630:9653)    	chr8:128633156-128755114(probes 9647:9648)    	chr8:123884469-130939736(probes 9563:9697)    	7.2961e-05	 7.2961e-05		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	1	0	0	0	0	0	1	1	0	1	0	1	1	0	0	2	0	2	2	2	2	1	1	1	2	1	0	1	1	0	1	0	2	0	2	0	2	0	2	0	0	1	0	0	1	0	1	0	2	1	1	0	1	0	1	2	2	1	1	1	2	1	0	0	1	1	2	0	2	0	0	0	2	0	0	0	0	0	2	0	2	2	1	0	1	0	0	2	1	2	0	1	0	0	1	1	2	0	2	2	1	1	1	2	2	0	
Amplification Peak  6	10q26.13	chr10:122667982-123893564(probes 11498:11523)	chr10:123173306-123462606(probes 11509:11513)	chr10:122667982-123909587(probes 11498:11525)	0.014577	   0.014577		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	2	0	0	0	0	0	0	1	0	0	0	0	0	1	0	
Amplification Peak  7	11q13.3 	chr11:67821083-70533128(probes 12128:12187)    	chr11:69788581-69788612(probes 12169:12170)    	chr11:68596356-70099588(probes 12151:12173)    	0.13972	    0.13972		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	1	0	0	0	2	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak  8	12p12.1 	chr12:24832434-25872659(probes 12727:12738)    	chr12:25336355-25853175(probes 12728:12737)    	chr12:24633077-26574659(probes 12718:12752)    	0.00017582	 0.00017582		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	2	0	1	0	2	0	
Amplification Peak  9	12q15   	chr12:68032120-70142158(probes 13231:13298)    	chr12:68743778-69490109(probes 13260:13277)    	chr12:62963335-72885145(probes 13156:13346)    	3.5118e-08	 3.5118e-08		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	1	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	1	0	2	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	1	0	0	2	0	0	0	2	0	
Amplification Peak 10	13q22.1 	chr13:73543082-74223843(probes 14147:14190)    	chr13:73695567-73711003(probes 14166:14169)    	chr13:73629651-73944532(probes 14156:14180)    	0.056966	   0.056966		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	1	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	2	0	0	0	0	1	1	0	1	0	0	1	0	0	1	2	2	0	2	0	0	2	0	0	0	0	0	1	2	0	0	1	0	0	1	0	0	1	0	1	0	0	0	0	1	1	0	0	1	2	2	1	0	0	0	0	0	0	0	1	0	1	0	0	1	2	1	0	
Amplification Peak 11	15q26.1 	chr15:87285739-102531392(probes 15418:15522)  	chr15:90319949-90702283(probes 15442:15453)    	chr15:90319949-90777994(probes 15442:15456)    	0.19134	    0.19134		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	1	2	0	2	0	0	1	0	0	1	0	0	0	0	0	0	1	1	0	1	0	2	0	0	
Amplification Peak 12	17q12   	chr17:31682027-36884102(probes 16252:16304)    	chr17:33599987-33878109(probes 16270:16273)    	chr17:33599987-33974593(probes 16270:16276)    	0.18203	    0.24011		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	1	1	0	1	0	
Amplification Peak 13	17q12   	chr17:35621565-39490730(probes 16304:16319)    	chr17:37156334-39490729(probes 16317:16318)    	chr17:35264025-40351039(probes 16296:16346)    	0.0040917	  0.0062508		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	2	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	2	1	1	1	0	1	0	
Amplification Peak 14	18q11.2 	chr18:19226567-20717141(probes 16878:16929)    	chr18:19563371-19897647(probes 16891:16906)    	chr18:19303059-20743854(probes 16879:16931)    	0.012006	   0.012006		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	1	0	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	2	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	2	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	2	1	0	1	0	0	0	2	0	
Amplification Peak 15	19q12   	chr19:30134333-30434489(probes 17740:17749)    	chr19:30189868-30401284(probes 17742:17746)    	chr19:28641462-31646067(probes 17697:17785)    	8.7088e-10	 8.7088e-10		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	2	0	0	2	0	0	0	2	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	2	0	2	1	0	1	1	0	0	0	2	2	2	0	0	2	0	2	2	0	
Amplification Peak 16	20q13.2 	chr20:51900884-52669973(probes 18675:18690)    	chr20:52211164-52484660(probes 18679:18686)    	chr20:49909694-54010703(probes 18641:18715)    	0.00015882	 0.00015882		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	1	1	0	0	2	1	0	1	0	0	0	0	1	0	2	2	0	2	0	0	2	0	0	0	2	1	1	0	1	0	1	0	0	1	1	0	2	0	0	1	0	1	1	1	0	0	2	1	1	1	1	0	2	0	2	1	0	2	1	1	0	0	2	1	1	0	1	1	0	0	2	0	0	0	0	0	1	1	1	2	1	2	0	0	1	2	0	1	0	1	0	0	0	1	2	2	2	1	1	0	2	2	2	1	
Deletion Peak  1	1p36.11 	chr1:26023101-28275742(probes 222:259)        	chr1:26995371-27087726(probes 239:242)          	chr1:19528882-31907029(probes 145:301)          	0.00072694	 0.00072694		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	1	0	0	0	0	0	1	0	0	1	0	0	1	1	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	1	1	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	0	1	0	0	1	1	0	
Deletion Peak  2	2q32.1  	chr2:120989649-212974101(probes 2261:2768)  	chr2:187205659-187469456(probes 2594:2603)    	chr2:187205659-187685339(probes 2594:2606)    	0.14299	    0.20556		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  3	2q37.2  	chr2:233474044-243199373(probes 2877:2969)  	chr2:236675366-236770884(probes 2920:2921)    	chr2:236408696-238811376(probes 2906:2934)    	0.051282	   0.067573		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	
Deletion Peak  4	3p14.2  	chr3:59563588-61184955(probes 3480:3506)      	chr3:61101080-61129839(probes 3496:3499)        	chr3:59563589-61349571(probes 3481:3516)        	0.00060877	 0.00060877		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	1	0	1	1	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	1	0	0	0	1	1	0	0	0	1	0	1	1	0	1	0	0	2	1	0	
Deletion Peak  5	3p11.1  	chr3:90309030-93822733(probes 3743:3759)      	chr3:90311099-93822732(probes 3746:3758)        	chr3:90311099-93933837(probes 3746:3761)        	0.079337	   0.079337		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	1	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	
Deletion Peak  6	4q22.1  	chr4:1-191154276(probes 4422:5367)            	chr4:91832276-91880563(probes 4847:4848)        	chr4:91444928-92590397(probes 4807:4889)        	0.0025494	    0.39948		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	2	0	1	0	0	1	0	0	0	1	0	0	0	1	1	0	1	1	0	0	0	0	1	0	0	0	1	0	0	0	0	1	1	1	1	0	1	1	0	1	0	
Deletion Peak  7	4q22.1  	chr4:92019515-92330029(probes 4864:4881)      	chr4:92063022-92069467(probes 4867:4868)        	chr4:91444928-92590397(probes 4807:4889)        	0.0001774	   0.063103		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	1	0	0	1	1	0	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	1	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	1	0	0	0	1	1	0	0	1	0	0	0	0	1	0	0	1	0	0	0	0	0	1	1	1	1	0	1	1	0	1	0	
Deletion Peak  8	4q35.1  	chr4:178705323-191154276(probes 5312:5367)  	chr4:185382368-186651978(probes 5351:5353)    	chr4:170615979-191154276(probes 5267:5367)    	3.8874e-05	 0.00053589		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	1	0	1	1	0	0	1	1	1	0	0	1	1	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	1	1	1	1	1	0	1	1	1	0	
Deletion Peak  9	5q12.1  	chr5:59050959-59380706(probes 5683:5702)      	chr5:59260455-59314804(probes 5696:5699)        	chr5:58324237-70943578(probes 5648:5783)        	5.7067e-06	 5.7067e-06		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	0	1	1	0	0	0	0	0	0	1	0	0	0	1	0	1	0	1	0	0	0	0	0	0	1	0	0	0	1	0	0	0	1	1	0	0	1	0	0	0	1	1	1	1	1	1	0	1	2	1	0	
Deletion Peak 10	6p25.3  	chr6:1867395-2191114(probes 6315:6328)          	chr6:2066280-2115883(probes 6320:6321)            	chr6:1-2415753(probes 6298:6346)                    	0.00043209	 0.00043209		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	1	0	0	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	1	1	0	0	0	1	0	0	1	1	0	0	0	2	0	0	
Deletion Peak 11	7q36.3  	chr7:129240874-159138663(probes 8470:8644)  	chr7:157883874-159138663(probes 8633:8644)    	chr7:155963837-159138663(probes 8607:8644)    	0.035007	   0.035007		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	0	1	1	0	0	0	
Deletion Peak 12	9p23    	chr9:9455034-9627050(probes 9883:9890)          	chr9:9504994-9520129(probes 9888:9889)            	chr9:8797943-10791437(probes 9858:9931)          	4.8155e-09	 7.1869e-09		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	1	1	0	0	1	1	0	0	1	1	0	1	0	0	0	0	0	1	1	0	0	0	1	1	0	1	0	1	1	0	0	1	1	0	0	2	1	1	0	0	1	1	0	0	0	1	0	1	0	0	0	
Deletion Peak 13	9p21.3  	chr9:21852135-21983214(probes 10019:10026)    	chr9:21864827-21973073(probes 10020:10025)      	chr9:20912911-26919138(probes 9994:10068)       	9.9586e-09	 1.5618e-08		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	1	1	1	0	0	0	0	0	1	1	0	0	0	0	1	1	0	1	1	0	0	0	1	0	1	0	0	0	1	0	1	1	1	0	0	0	0	2	0	0	1	1	0	0	0	1	0	0	1	2	1	0	0	1	1	0	0	2	1	0	0	0	0	0	
Deletion Peak 14	10q23.31	chr10:88849958-89802725(probes 11204:11225)  	chr10:89547681-89744114(probes 11211:11219)    	chr10:88849958-90063549(probes 11204:11229)    	0.0048402	  0.0048402		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	0	1	1	0	2	1	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	1	1	1	0	0	0	0	0	
Deletion Peak 15	11q22.3 	chr11:97158304-135006516(probes 12378:12578)	chr11:109074641-109428223(probes 12437:12440)	chr11:107295068-128077799(probes 12425:12547)	0.075334	   0.075334		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	1	1	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	
Deletion Peak 16	16q23.1 	chr16:78583111-78648685(probes 15926:15941)  	chr16:78620779-78636643(probes 15935:15938)    	chr16:78477442-79008568(probes 15897:15960)    	9.9586e-09	 9.9586e-09		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	1	0	0	0	0	0	0	1	0	0	0	0	1	1	0	1	0	0	1	0	0	1	0	0	0	0	0	1	0	1	0	1	0	1	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	1	1	0	0	0	0	1	1	0	0	0	1	1	0	1	0	1	0	0	0	0	0	0	1	1	1	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	1	1	0	0	0	1	1	0	0	0	0	
Deletion Peak 17	17q24.3 	chr17:70127295-70640568(probes 16629:16650)  	chr17:70477558-70521358(probes 16640:16641)    	chr17:70412496-70640568(probes 16634:16650)    	0.1106	     0.1106		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	
Deletion Peak 18	18q21.2 	chr18:36926465-78077248(probes 17227:17410)  	chr18:48510732-49746888(probes 17293:17304)    	chr18:36926466-78077248(probes 17228:17410)    	0.00092452	 0.00092452		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	1	1	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	1	1	0	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	1	1	0	0	0	0	1	0	0	0	0	0	0	0	1	1	1	0	1	0	1	0	1	1	0	0	0	0	1	0	0	0	1	0	0	0	1	0	1	1	1	0	0	0	0	1	1	0	0	1	0	0	0	1	1	0	
Deletion Peak 19	20p12.1 	chr20:14610502-15179289(probes 18180:18203)  	chr20:14666951-15165122(probes 18189:18195)    	chr20:14643328-15183333(probes 18181:18205)    	0.029935	   0.029935		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	2	1	0	
Deletion Peak 20	22q13.31	chr22:44516646-51304566(probes 19231:19275)  	chr22:46244263-51304566(probes 19252:19275)    	chr22:45576203-51304566(probes 19246:19275)    	0.034187	   0.034187		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	1	0	0	0	0	1	1	0	1	0	1	0	1	1	1	0	
Amplification Peak  1 - CN values	6p21.1  	chr6:41317102-44379101(probes 6539:6590)        	chr6:43599396-43656923(probes 6572:6575)        	chr6:43599396-44416589(probes 6572:6592)        	0.062329	   0.062329		Actual Copy Change Given	0.01902	0.015385	0.15219	0.281	-0.0038721	-0.0026702	0.52087	0.0069822	0.01564	0.1245	0.0021885	0.18837	0.64742	0.0093517	0.00803	0.013245	-0.90884	0.0076614	-0.63372	0.40635	0.10812	0.40239	0.10333	-0.0032155	0.005758	0.0058525	0.24586	0.00092935	0.90173	0.4221	0.21039	-0.016374	0.7408	0.00052995	0.03192	-0.025808	0	0.013116	0.012499	0.0067266	0.019958	-0.026697	-0.054577	0.16216	-0.048219	0.0024196	0.036895	0.049507	0.091058	0	0.0090599	-0.0046889	-0.0065979	0.005032	0.15821	0.31416	0.086716	0.0201	0.0091963	0.12884	0	0.07727	0	-0.0013059	0.13074	-0.028936	-0.007842	-0.0089537	-0.048106	0.01091	0.19387	0.044677	2.7413	-0.20169	0.0038199	-3.9013e-05	-0.039233	0	-0.13761	0.059029	0.0027651	5.6199	2.9627	0.51217	0.01137	-0.050183	0.0080485	-0.20344	0.037036	0.14194	-0.73312	-0.34819	-0.22243	-0.0024918	0.00411	-0.14126	0.72645	0.87666	3.5398	0.83314	0	0.44806	0.24842	0.69096	-0.04969	-0.0056838	
Amplification Peak  2 - CN values	7p11.2  	chr7:54995267-55593325(probes 7720:7739)        	chr7:55079144-55487227(probes 7723:7734)        	chr7:55036384-55777577(probes 7721:7743)        	0.0034831	  0.0034831		Actual Copy Change Given	0	0.66432	6	0.18986	0.14715	0.0045403	0.51548	-0.0024715	-0.013536	-0.15443	-0.013199	0.20422	-0.0031538	-0.0036097	0.015949	4.5241e-05	0.030182	-0.092099	0.0045061	0.010887	0.075167	0.40542	6	0.49176	0.013521	-0.0052788	0.56378	-0.0058046	0.66379	0.015299	6	-0.0046443	0.41764	0.34105	0.1385	6	0.058929	0.0046484	1.1532	-0.0025679	0.016407	-0.0076377	0.0028102	0.26165	0.24497	0.65203	0.021921	-0.12852	0.38231	0.22337	0.0030374	0.61429	0.4038	-0.0013227	0.75393	0.0057318	0.89588	0.10592	-0.0052976	0.0049082	-0.2303	0.0051179	-0.014315	0.0035833	0.87961	0.78408	0.46864	0.32538	0.36208	0.67229	-0.028576	-0.014322	0.52421	0	-0.00049996	0.005776	0.030458	0.0057907	0.86766	0.0071138	0.81269	0.73774	-0.018138	-0.028764	0.51478	0.095422	0.039558	0.26093	0.25075	0.37575	0.15273	0.90389	0.59644	0.0023634	0.019997	0.0061034	0.44771	-0.040369	0.61016	0.047275	-0.098471	-0.56225	0.2736	0.66285	0.01124	0.61787	
Amplification Peak  3 - CN values	7q21.2  	chr7:90901353-96204218(probes 7998:8077)        	chr7:91788888-92079923(probes 8015:8016)        	chr7:90376874-99219242(probes 7983:8115)        	6.9315e-05	 6.9315e-05		Actual Copy Change Given	0	0.69	0.016404	0.15368	0.14715	0.0045403	0.51548	-0.0024715	-0.023121	0.042964	-0.013199	0.20422	-0.058464	-0.0036097	0.015949	0.0052989	0.035535	0.3263	0.0045061	0.078215	0.075167	0.40542	0.14956	0.29101	0.013521	-0.0052788	5.9278	-0.0058046	0.65456	0.015299	6	2.2674	0.41764	0.34105	0.26778	0.11194	0.058929	0.0046484	1.1778	-0.0025679	0.016407	0.0056341	0.0028102	3.4576	0.044736	0.65203	0.021921	-0.12852	0.39257	0.22337	1.2661	0.61429	0.4038	-0.0013227	1.6098	0.0057318	0.91321	0.20157	-0.0052976	-0.84585	-0.0051003	1.564	0.0092194	0.0035833	0.03278	0.78408	3.9129	0.33916	6	0.21507	-0.00016136	-0.014322	0.61525	0	-0.00049996	0.005776	0.030458	-0.025827	0.86766	0.89804	0.81269	1.116	-0.018138	-0.028764	0.49853	0.095422	-0.038826	0.33006	-0.22911	0.37575	0.12666	0.2817	2.2225	0.0023634	0.019997	0.67627	1.6472	0.2384	0.56578	0.47589	0.47293	-0.037414	-0.37143	-0.034081	0.01124	0.61787	
Amplification Peak  4 - CN values	8p23.1  	chr8:10975654-12724285(probes 8688:8700)        	chr8:11552479-12724284(probes 8697:8699)        	chr8:8661010-14022484(probes 8669:8704)          	0.00017582	 0.00017582		Actual Copy Change Given	0.42325	-0.041092	4.2131	0.19455	0.13226	0.0011646	-0.52456	0.42797	-0.028909	6	0.27389	0.78258	-0.0099919	0.0071625	-0.0026222	1.3035	-0.93045	-0.1307	-0.0032009	0.30619	-0.048164	0.40222	-0.27695	0.41497	0.96849	0.43225	-0.096274	0.68173	-0.36093	2.4172	6	-0.2292	-0.45544	0.084004	-0.087415	0.0048065	1.0217	-0.00158	-0.012637	0.24832	0.17862	0.34262	-0.073856	0.23954	-0.51808	-0.029602	-0.46531	0.048395	-0.3338	-0.042658	-0.40139	-0.010486	0.78756	-0.14132	-0.74494	0.20516	-0.3001	0.39713	0.63657	-0.85979	-0.44314	0.30537	0.21435	-0.036155	0.1053	0.77669	0.88468	-0.016325	-0.68535	0.5654	0.15892	0.04219	-0.61133	-0.010024	0.049144	-0.0099229	0.1981	-0.0027142	-0.28644	-0.050482	1.5876	-0.024844	-0.67461	-0.35527	0.59785	-0.05323	-0.024029	6	0.33683	-0.22748	0.13401	-0.0086626	-0.21862	-0.0031929	0.25909	0	-0.95996	0.73636	-0.64535	-0.17122	0.23848	0.28367	4.8797	1.3423	-0.46757	-0.0089595	
Amplification Peak  5 - CN values	8q24.21 	chr8:128070146-128877354(probes 9630:9653)    	chr8:128633156-128755114(probes 9647:9648)    	chr8:123884469-130939736(probes 9563:9697)    	7.2961e-05	 7.2961e-05		Actual Copy Change Given	0.42325	-0.017188	-0.0016393	0.21464	0.13226	-0.0056914	0.7665	0.42797	-0.016114	0.35493	0.27389	0.78022	0.79958	0.0071625	0.015033	1.3035	-0.92875	1.326	1.2368	1.3733	1.0195	0.40222	0.61974	0.35809	0.95892	0.43225	-0.02115	0.68173	0.58638	0.27659	0.36925	-0.00026486	1.1624	0.084004	2.7255	0.0048065	1.0217	-0.00158	1.1383	0.24832	0.17077	0.40433	0.025781	0.063357	0.88495	-0.049559	0.87254	0.1143	1.709	0.71114	0.40629	0	0.80617	0	0.80608	1.1479	6	0.48104	0.69516	0.82774	5.943	0.30537	0.21435	0.007831	0.63115	0.80808	0.96439	-0.016325	4.5009	0.031399	-0.019431	0.1886	1.6916	-0.010024	0.049144	-0.0099229	0.1981	0.014922	6	-0.0043081	1.6244	1.4701	0.69222	0.1839	0.57117	0.093214	-0.024029	1.8615	0.58427	1.3976	0.17034	0.73475	-0.21862	-0.0031929	0.43141	0.44389	1.8337	-0.25362	0.92927	1.0902	0.34362	0.41851	0.39623	1.4535	1.352	-0.0089595	
Amplification Peak  6 - CN values	10q26.13	chr10:122667982-123893564(probes 11498:11523)	chr10:123173306-123462606(probes 11509:11513)	chr10:122667982-123909587(probes 11498:11525)	0.014577	   0.014577		Actual Copy Change Given	-0.0089105	-0.036795	6	-0.097063	2.0449	0	0.21024	0	-0.011629	0.16977	-0.0024706	-0.26929	-0.00042908	-0.35236	-0.0040208	-0.02034	0	-0.054161	0	0.81482	-0.17026	0.40591	-0.16396	0.0003706	-0.00086865	0.0036904	-0.047614	-0.0085313	0.62153	0.53042	-0.17873	0.21158	0.1792	-0.010082	0.01556	-0.037166	-0.037975	-0.015502	-0.0090419	-0.01149	1.375	-0.016188	-0.026139	-0.2747	0	0.34497	-0.45228	0.056932	0.13346	0.098638	-0.0159	0.58264	0.0022562	-0.0096834	-0.24675	-0.17582	-0.025913	-0.016188	-0.027337	0.87766	-0.27135	-0.31177	-0.022202	-0.015241	-0.81746	0.14803	0.93965	-0.013623	-0.34683	0.20303	0.1304	-0.0036884	6	-0.037714	0.00056393	-0.00074595	-0.039182	0.0079788	0.069309	0.045522	-0.014071	-0.031927	0.14732	0.39109	0	-0.070075	-0.0010812	0	0.026531	-0.12683	0.48463	2.0576	-0.22649	0.043399	-0.013143	0.028347	0.0095721	-0.30337	0.34171	-0.37289	-0.32569	0.0053967	-0.008359	-0.062169	0.46028	-0.0029504	
Amplification Peak  7 - CN values	11q13.3 	chr11:67821083-70533128(probes 12128:12187)    	chr11:69788581-69788612(probes 12169:12170)    	chr11:68596356-70099588(probes 12151:12173)    	0.13972	    0.13972		Actual Copy Change Given	0.013296	-0.0034523	-0.01245	-0.11848	0.017547	-0.0029576	-0.0084027	-0.0016796	-0.0032036	-0.0036713	-0.0005017	0.2035	-0.010977	-0.33759	0.011123	-0.0022944	-0.96861	0.2754	-0.0092653	1.3275	0.16832	0.40287	0.3079	-0.0057992	-0.0031631	0.0042166	1.2497	0.66104	0.087402	0.9997	0.029915	-0.01355	0.011963	-0.0027471	-0.024692	0.012119	-0.0070432	-0.0013537	-0.0045939	-0.00077428	-0.0012705	0.0059995	-0.019782	3.5921	0.039441	-0.012083	-0.41858	0.02597	-0.1729	0.32378	-0.27047	0.00096559	0	0.0099878	0	0.022948	-0.013138	0.050377	-0.0052003	-0.12307	0.23955	6	0.013378	0.013515	-0.0044091	-0.014035	0.48069	-0.01127	0	0.7159	-0.088064	0.035309	-0.048573	0.01353	0.04745	-0.0069043	0.19271	-0.0040334	1.7728	0.0013229	-0.003551	0.23721	0.0043508	-0.024702	-0.0072716	0.077547	-0.040402	-0.14848	-0.061919	-0.12308	0.17289	-0.0046251	-0.19799	0.0073068	0	0.032126	-0.12061	-0.23502	-0.20524	-0.43224	-0.00074192	0	-0.04032	-0.099886	0.058644	-0.0055118	
Amplification Peak  8 - CN values	12p12.1 	chr12:24832434-25872659(probes 12727:12738)    	chr12:25336355-25853175(probes 12728:12737)    	chr12:24633077-26574659(probes 12718:12752)    	0.00017582	 0.00017582		Actual Copy Change Given	0.0080448	0.0056469	-0.13087	-0.013993	-0.0056788	0.0030105	0.0028327	0.0037079	0.0088619	6	0.0041888	-0.26589	-0.15094	0.0075178	0.015088	0	0.040858	-0.069364	0.0026757	0.049614	-0.011822	0.41495	0.015061	0	0.0061413	-0.0019591	0.61975	0.012641	-0.090009	0.03939	0.024931	0.0045089	-0.035104	0.1635	0.10763	0.0025552	-0.012164	0	1.1678	0.012661	-0.0072005	-0.014254	0.11051	0.31232	-0.31989	0	6	0.20537	0.40225	0.069354	0.015614	0.0039354	-0.0015468	0.0067069	-0.1866	-0.00044514	0.052429	0.0040948	0	0.01354	0.19514	-0.011883	-0.0046996	0.0058773	0.12094	0	6	0.27504	0.03937	-0.20261	-0.32701	-0.01467	0.0065071	-0.0099493	0.0010083	0.0049027	0.20821	0.0069626	0.80476	-0.86898	0.0060607	0.36707	-0.080922	-0.52851	0.018612	0.0027999	0	0.3071	-0.18916	0.15139	6	0.018745	0.086969	0.03564	0.00037099	0.036497	0.21922	0.042722	-0.20475	0.091971	4.0993	-0.038738	0.66002	-0.74061	6	0.00667	
Amplification Peak  9 - CN values	12q15   	chr12:68032120-70142158(probes 13231:13298)    	chr12:68743778-69490109(probes 13260:13277)    	chr12:62963335-72885145(probes 13156:13346)    	3.5118e-08	 3.5118e-08		Actual Copy Change Given	0.0080448	0.050001	0.31619	0	-0.0056788	0.0030105	0.51231	0.0037079	0.0039007	0.0025789	0.0041888	-0.26589	0.56568	0.0075178	-0.0022611	0	0.07836	-0.067353	0.0026757	0.044834	-0.023368	0.41495	2.2351	0	0.0061413	-0.0019591	0.6218	0.012641	-0.090009	0.03939	0.024931	0.0045089	-0.035104	0.1635	-0.056204	0.0025552	-0.012164	0	0	0.012661	-0.0072005	0.015375	0.12006	0.31232	0.024772	0	6	0.010625	0.3862	-0.19289	5.454	0.0039354	-0.0015468	0.0067069	-0.4011	-0.00044514	0.052429	0.019218	0	-0.87344	1.0879	6	-0.0046996	0.0058773	0.12094	0	0.49906	0.27132	6	-0.21324	0.13365	-0.01467	0.035246	-0.0099493	0.0010083	0.0049027	0.20821	0.00633	0.11094	1.3292	0.0060607	0.36696	-0.080922	0.0044365	0.018612	0.0027999	0	0.24988	0.064895	0.10713	6	0.018745	0.086969	0.03564	0.00037099	0.0093735	0.6218	0.64342	-0.20475	0.091971	4.859	-0.038738	0.008404	0.050556	6	0.00667	
Amplification Peak 10 - CN values	13q22.1 	chr13:73543082-74223843(probes 14147:14190)    	chr13:73695567-73711003(probes 14166:14169)    	chr13:73629651-73944532(probes 14156:14180)    	0.056966	   0.056966		Actual Copy Change Given	0.0095863	0.72034	0.093584	-0.12012	0.13384	0.32669	-0.010771	-0.011538	-0.014915	-0.15197	-0.0056329	0.17417	0.0088539	-0.017598	0.91674	-0.0040554	-0.61926	2.1123	-0.025416	2.0145	0.11165	-0.023361	0.25399	-0.0049608	-0.006892	0.22204	-0.11298	-0.015916	-0.065452	0.064311	-0.016884	-0.2132	0.30811	0.32148	-0.10618	-0.0059681	0.52265	0.0075252	2.2392	-0.0067879	-0.0081158	-0.005919	0	0.36896	0.83649	-0.0072104	0.42394	0	-0.13087	0.3813	-0.38331	0.0092805	0.3801	1.0087	1.5412	-0.31797	1.2292	0.0093708	0.0070797	2.801	-0.5933	-0.035115	0.0072708	-0.0093833	-0.23848	0.79333	0.97647	0.26707	-0.29977	0.63118	-0.010436	-0.072435	0.56092	0.23653	-0.060425	0.52327	-0.042515	0.33562	0.031116	0.11293	-0.039555	0.045685	0.64451	0.30826	-0.024554	0.20357	0.45638	0.98805	3.4525	0.50468	0	-0.29209	0.0024345	-0.0064768	0.163	-0.58335	0.20557	0.51289	0.014155	0.73336	-0.025031	0.079841	0.3235	1.4325	0.4371	-0.0069645	
Amplification Peak 11 - CN values	15q26.1 	chr15:87285739-102531392(probes 15418:15522)  	chr15:90319949-90702283(probes 15442:15453)    	chr15:90319949-90777994(probes 15442:15456)    	0.19134	    0.19134		Actual Copy Change Given	-0.017311	-0.023467	0.18771	-0.0068225	-0.010441	0.0014399	0.18504	0.0068332	-0.015401	-0.0030833	0.0069705	-0.26696	0.81138	0.0028019	-0.0053017	-0.054734	-0.67282	1.4123	0.0024473	-0.056351	0.028278	-0.0048812	0.20771	0.0033833	0.0016283	0	1.6813	-0.0074167	-0.10322	-0.087273	0.33562	0	-0.053125	0	0	-0.027771	-0.034479	-0.016934	-0.0065164	-0.0030227	-4.7526e-05	-0.023703	0.0405	0.22547	0.69118	-0.26565	-0.0018038	0.033892	-0.26575	-0.17188	-0.0064892	-0.072958	-0.0064888	-0.010505	-0.42905	0.27857	-0.27257	-0.0109	-0.016989	0.017747	3.9246	-0.037065	-0.026538	-0.024926	-0.37275	0.020133	-0.026164	0.10666	-0.0013056	0.20717	0.12763	0	-0.016469	0.65587	0.0017161	0.0039076	-0.035625	0.0086437	0.12559	0.005108	-0.0042981	0.39	0.51682	1.2608	0.011739	1.0178	0.014771	-0.23072	0.4434	-0.15357	0.14753	0.66113	-0.1153	-0.02267	-0.011986	0.21899	-0.31665	-0.46349	0.38678	0.30292	-0.35637	0.36501	0.0093197	1.3503	0.28167	0.00089236	
Amplification Peak 12 - CN values	17q12   	chr17:31682027-36884102(probes 16252:16304)    	chr17:33599987-33878109(probes 16270:16273)    	chr17:33599987-33974593(probes 16270:16276)    	0.18203	    0.24011		Actual Copy Change Given	-0.016429	0.7063	0.048756	-0.0071687	-0.029879	0.022707	0.017248	-0.0015753	-0.010246	0.0034293	0.016992	-0.2565	0.80171	-0.00031003	-0.011321	-0.060255	-0.34164	-0.1162	0.0031301	-0.066745	-0.15432	0	0.16371	0.0079738	0.0048165	0.0035575	0.54598	0.001958	-0.087132	0.028312	-0.35581	0.0052968	0.23996	0.0042679	0.024499	-0.044941	-0.04258	-0.017495	0.0041651	0.011509	0.022746	-0.036725	0.027506	6	0.58368	0.044197	-0.0067616	0.015875	0.079208	0.18826	0.18219	0.0055584	0.0034464	-0.0088321	0.18214	0.093241	0.01062	-0.020101	-0.019786	0.010608	-0.17993	0.27114	-0.039297	-0.02835	0.071239	0.05323	-0.025474	-0.0052327	0.39209	0	0.16512	0.031449	0.033205	0.3841	-0.0072793	-0.014539	0.1966	0.0016659	1.0802	0.039769	0.0089463	0.0049238	6	0.051093	0.041693	-0.079705	0.045555	-0.059387	-0.26028	-0.035773	-0.3171	-0.03602	0.043194	-0.024768	0.0085533	0.16526	0.35601	0.3185	-0.26367	0.014237	0.3189	0.32779	0.476	-0.063106	0.50863	0.012556	
Amplification Peak 13 - CN values	17q12   	chr17:35621565-39490730(probes 16304:16319)    	chr17:37156334-39490729(probes 16317:16318)    	chr17:35264025-40351039(probes 16296:16346)    	0.0040917	  0.0062508		Actual Copy Change Given	-0.016429	0.69953	0.048756	-0.0071687	-0.029879	0.022707	0.017248	-0.0015753	-0.010246	0.0034293	0.016992	-0.2565	0.041901	-0.00031003	-0.011321	-0.060255	-0.34164	1.0291	0.0031301	-0.066745	-0.15432	0	3.175	0.0079738	0.0048165	0.0035575	0.54598	0.001958	-0.087132	0.028312	-0.35581	0.0052968	2.8882	0.0042679	0.024499	-0.044941	-0.04258	-0.017495	0.0041651	0.011509	0.022746	-0.036725	0.027506	-0.35107	1.1311	0.044197	-0.0067616	0.015875	0.079208	2.3627	0.18219	0.0055584	0.0034464	-0.0088321	0.18214	0.093241	0.44577	-0.020101	-0.019786	0.010608	1.2044	0.27114	-0.039297	-0.02835	0.063111	0.05323	-0.025474	-0.0052327	0.31077	0	0.16512	0.031449	0.52284	0.3841	-0.0072793	-0.014539	0.1966	0.0016659	1.6425	0.039769	0.0089463	-0.38146	-0.021827	0.69544	0.041693	-0.079705	0.045555	-0.059387	-0.26028	-0.035773	-0.3171	-0.03602	0.043194	-0.024768	0.0085533	0.16526	3.8531	0.3185	-0.26367	6	0.3189	0.32779	0.476	-0.063106	0.50863	0.012556	
Amplification Peak 14 - CN values	18q11.2 	chr18:19226567-20717141(probes 16878:16929)    	chr18:19563371-19897647(probes 16891:16906)    	chr18:19303059-20743854(probes 16879:16931)    	0.012006	   0.012006		Actual Copy Change Given	-0.015144	-0.025421	0.00096952	0.5374	-0.011166	0.8336	0.49901	-0.021542	0.0012222	-0.1756	-0.0017474	0.70057	-0.0037961	-0.33495	-0.0032852	-0.016568	-0.90194	0.23946	-0.019872	0.15259	2.3512	0.094466	1.1546	-0.0051343	-0.011999	-0.0014602	0.62537	-0.016482	-0.35106	0.045752	0.00097974	0.83096	0.43259	-0.024015	-0.063413	-0.057755	-0.016985	-0.0066507	-0.0057381	-0.0061167	-0.10622	-0.022575	0.18504	0.86183	0.91792	-0.27875	0.012726	-0.21937	-0.1981	0.29674	0.33117	0.00092824	-0.0145	-0.013842	-0.24802	-0.25036	0.46934	-0.012093	-0.011001	-0.015225	-0.22863	-0.033807	-0.0024652	-0.010609	-0.32506	0.83072	2.0025	0.30074	-0.33155	0.72082	-0.35098	-0.14829	-0.010244	-0.033103	-0.0092568	-0.01697	-0.043446	0.010435	0.38161	0	-0.017955	0.097239	-0.028074	0.016853	-0.036112	0.029326	0.030981	0.14633	0.054645	0.24501	-0.76176	0.0033591	0.10178	-0.0071281	-0.058845	1.1409	0.52412	4.4799	0.51055	-0.16886	0.32572	-0.09664	-0.024715	-0.0079009	6	-0.011648	
Amplification Peak 15 - CN values	19q12   	chr19:30134333-30434489(probes 17740:17749)    	chr19:30189868-30401284(probes 17742:17746)    	chr19:28641462-31646067(probes 17697:17785)    	8.7088e-10	 8.7088e-10		Actual Copy Change Given	-0.018769	-0.026457	-0.097104	0.05529	-0.049144	0.029352	0.029141	-0.02482	0.37291	0.023745	0.01126	-0.24076	-0.01781	0	-0.021783	-0.057526	-0.02702	3.596	0.013036	6	0.19661	0.074172	0.99677	0.025593	0.0056438	-0.0030276	1.2875	-0.021886	0.73088	-0.0098059	0.3097	-0.0024382	-0.45043	0.052149	0.016741	0.015243	-0.043107	-0.024855	-0.031943	-0.0083817	0.28572	-0.048971	0.051287	-0.061426	6	0.043893	6	-0.090007	1.2457	-0.11044	-0.024214	0.0029236	0.00464	-0.043747	0.14645	0.0060302	-0.30929	-0.05594	-0.044193	0.067169	3.0885	-0.061071	-0.060317	-0.041167	-0.43733	0.049209	-0.043717	0.34435	0.96677	-0.28518	0.11232	0.00064119	-0.074351	-0.031376	-0.0016911	-0.0060497	0.43589	0.010662	-0.11116	0.0056673	-0.0072605	-0.0038487	0.42951	-0.5258	0.073341	0.054694	1.3115	0.1617	6	0.62878	0.06199	0.67215	0.38022	-0.023098	0.010727	-0.11534	5.9309	3.9933	6	-0.042788	-0.36521	6	-0.40036	1.315	1.5327	0	
Amplification Peak 16 - CN values	20q13.2 	chr20:51900884-52669973(probes 18675:18690)    	chr20:52211164-52484660(probes 18679:18686)    	chr20:49909694-54010703(probes 18641:18715)    	0.00015882	 0.00015882		Actual Copy Change Given	-0.02338	-0.048854	0.43572	0.81128	0.12495	0.0043178	2.0757	0.34495	-0.05014	0.33212	0.0003072	0.16589	-0.011926	-0.16935	0.73212	-0.077924	1.7422	1.2091	-0.018079	6	0.29193	-0.023492	1.9081	0.0016898	0.0025414	0.14178	2.6689	0.6615	0.72262	0.28268	0.8464	0.20868	0.8398	-0.002427	-0.0027959	0.33156	0.47534	-0.029745	1.1642	-0.0097933	0.01854	0.3104	-0.02428	0.31333	0.43784	0.48939	-0.042651	0.032948	1.0651	0.83491	0.76841	0.61181	0.42189	-0.022224	0.95269	0.28432	2.0117	0.58944	-0.035208	5.7425	0.63353	0.58373	-0.034768	-0.028844	1.644	0.80008	0.65124	0.0036559	0.69981	0.70776	0.14613	0.041957	1.4454	0.19755	-0.095038	-0.062763	0.21982	-0.35519	0.63036	0.74313	0.80261	1.8946	0.49461	2.9997	-0.0091721	0.059819	0.5236	1.0913	0.24968	0.45704	0.16652	0.65764	0.27049	-0.025528	-0.014251	0.46562	0.96346	6	1.3955	0.50025	0.39619	-0.037086	6	1.3173	6	0.58554	
Deletion Peak  1 - CN values	1p36.11 	chr1:26023101-28275742(probes 222:259)        	chr1:26995371-27087726(probes 239:242)          	chr1:19528882-31907029(probes 145:301)          	0.00072694	 0.00072694		Actual Copy Change Given	-0.48854	0.02467	0.0023562	-0.095559	0	-0.0030951	-0.50461	0.0044283	0.0021646	-0.37979	0.0076102	-0.26545	-0.74964	-0.34567	-0.0022853	-0.034269	-0.96951	-0.14034	-0.0021914	-0.78337	-0.075623	-0.0083783	-0.12657	0.0017201	0.011465	0.0061178	-0.10987	0.0068442	-0.11258	0.025753	-0.15628	-0.22137	-0.33159	0.049659	-0.050734	-0.018503	-0.026993	0.011764	0.013189	0.012691	0.0021586	0.0050043	0.011479	-0.50397	-0.016989	0.17534	0.014869	-0.25813	-0.21836	-0.24619	-0.38371	-0.002434	0.0036149	0.02116	-0.20562	-0.25252	0.040459	-0.11394	0.011907	-0.85521	-0.40127	0.025371	0.0063305	0.0031887	-0.014079	-0.75146	0.0026754	0	-0.020435	-0.016219	-0.38294	0.010364	0.49956	-0.29555	0.012223	0.0019521	0	0.0031111	-0.36119	-0.86042	0.012832	-0.37071	-0.56583	0.012984	0.012184	-0.082988	0.0043802	0.10675	-0.25788	-0.013141	-0.77242	-0.034695	0.10211	0.00081914	0.003847	-0.12241	-0.38502	-0.24285	-0.34969	0	-0.34697	-0.039151	0.027093	-0.75273	-0.45807	0.0058472	
Deletion Peak  2 - CN values	2q32.1  	chr2:120989649-212974101(probes 2261:2768)  	chr2:187205659-187469456(probes 2594:2603)    	chr2:187205659-187685339(probes 2594:2606)    	0.14299	    0.20556		Actual Copy Change Given	-0.0010318	0	0.028529	0.087875	0.021199	-0.31718	-0.00039925	0.002321	0	0.0069102	-0.0016933	0	0.019542	0.011298	0.0014558	0.022715	0.020001	-0.4862	0.00035542	-0.78976	0.089013	-0.00043831	0.3043	-0.0032728	-0.0014661	-0.0020568	0.25164	-0.0038259	-0.30109	-0.016475	-0.32759	0.0052269	-0.30628	0.33924	0.074863	0.014963	-0.00059594	0.0023655	-0.0017763	0	0	-0.0046952	-0.013597	0	0.045299	0.5315	0.026635	-0.08638	-0.13783	-0.19406	0.0069729	0.01805	-0.0031043	0.02243	-0.016766	0.29239	0.16769	-0.17201	0.016895	-0.020594	-0.30038	0	-0.19902	0.0071605	0.18186	0.0055607	-0.46742	0.11349	0.11171	-0.24882	0.17029	-0.010428	0.55276	0.00050466	-1.2876	0.0042971	-0.013468	-0.085595	-0.37158	-0.85295	-0.0011369	-0.019983	0.010786	-0.065933	-0.00062094	0.0045578	-0.0072231	-0.23433	-0.18369	0	0.18707	0	0	0	-0.0026863	0.001905	-0.19683	0.10064	0.26464	-0.13818	0.0092603	-0.049996	0.076142	-0.061618	-0.054286	0.00063893	
Deletion Peak  3 - CN values	2q37.2  	chr2:233474044-243199373(probes 2877:2969)  	chr2:236675366-236770884(probes 2920:2921)    	chr2:236408696-238811376(probes 2906:2934)    	0.051282	   0.067573		Actual Copy Change Given	-0.0010318	0	0.028529	0.087875	0.011122	0.002746	-0.00039925	0.002321	0	0.0069102	-0.0016933	0	0.019542	0.011298	0.0014558	0.022715	0.020001	0.1469	0.00035542	0.017938	-0.016746	-0.00043831	0.55849	-0.0032728	-0.0014661	-0.0020568	0.25164	-0.0038259	0.10386	-0.016475	0	0.0052269	-0.30628	0.35908	0.074863	0.014963	-0.00059594	0.0023655	-0.0017763	0	0	-0.0046952	-0.013597	0	-0.42546	0.496	-0.024181	-0.08638	-0.22666	-0.19406	0.0069729	-0.010273	-0.032543	0.02243	-0.016766	-0.57593	0.16769	-0.31399	0.016895	-0.0072076	-0.027355	0	-0.02425	-0.2161	-0.85612	-0.026706	-0.50688	0.11349	0.046705	-0.24882	0.17029	-0.010428	0.55276	-0.90785	0.01175	0.0042971	-0.013468	-0.085595	0.1206	0.018331	-0.021071	-0.019983	0.010786	-0.065933	0.0053989	0.0045578	0.016837	-0.26732	-0.0011054	0	-0.7956	0	0	0	-0.0026863	0.001905	-0.19683	-0.0086989	-0.62904	-0.45421	0.0092603	-0.56585	0.076142	-0.14059	-0.014679	0.00063893	
Deletion Peak  4 - CN values	3p14.2  	chr3:59563588-61184955(probes 3480:3506)      	chr3:61101080-61129839(probes 3496:3499)        	chr3:59563589-61349571(probes 3481:3516)        	0.00060877	 0.00060877		Actual Copy Change Given	-0.85982	-0.010968	-0.17963	0.0033876	-0.008844	-0.022472	-0.013498	-0.0052184	0.29212	-0.1818	-8.0915e-05	0.19278	-0.011263	0.0017796	-0.019294	0.01203	0.0057446	-0.073399	0.61674	0.039652	-0.014249	0.41031	-0.31864	-0.0063781	0.1812	-0.013962	-0.10544	0	-0.35161	0.37482	-0.32818	0.0020342	-0.65685	-0.010428	-0.16455	-0.058612	0.03242	0.0057259	-0.039621	0.10493	-0.22615	-0.34164	-0.039417	-0.42948	-0.36712	-0.30899	-0.029313	-0.24467	0.13919	-0.24215	0.0099696	-0.0049766	-0.016595	-0.017329	-0.2492	-0.29216	-0.30013	-0.84482	0.013764	0.8228	-1.2909	-0.25607	-0.014657	-0.016956	-0.35274	-0.033517	-0.1338	0.00089284	-0.0011956	-0.21948	0.136	0.0089602	-0.17708	-0.27002	-0.019256	4.5092e-05	-0.044534	0.46033	-0.33904	-0.8458	-0.021926	0.2284	-0.53587	0.057128	-0.013268	-0.00070844	-0.69927	-0.095508	0.024462	-0.09844	-0.81557	-1.0373	-0.19203	0.005493	0.039661	-0.6003	-0.24631	-0.52613	-0.39909	0.13509	-0.35995	-0.052691	-0.033899	-1.4935	-0.4124	0.0041567	
Deletion Peak  5 - CN values	3p11.1  	chr3:90309030-93822733(probes 3743:3759)      	chr3:90311099-93822732(probes 3746:3758)        	chr3:90311099-93933837(probes 3746:3761)        	0.079337	   0.079337		Actual Copy Change Given	0.0097089	-0.4504	-0.072116	0.96311	-0.008844	-0.0048933	-0.013498	-0.0052184	0.0051529	-0.1818	-8.0915e-05	0.19278	-0.31314	0.0017796	0.011179	0.01203	0.0057446	0.23882	-0.0022239	0.024025	-0.014249	0.41031	-0.30248	-0.0063781	0.1812	-0.013962	-0.10544	0	0.2354	-0.047794	-0.32818	0.0020342	-0.31355	-0.010428	0.036761	0.16608	0.03242	0.0057259	0.003846	0.31689	-0.21667	0.015254	0.011046	-0.42948	-0.73544	-0.26854	-0.65376	0.079378	-0.15442	-0.4094	0.0099696	-0.0049766	-0.016595	-0.66969	-0.2492	0.0029173	-0.18574	0.01887	0.013764	0.95768	0.67306	-0.25607	-0.67613	-0.31838	-0.35274	-0.034295	-0.5842	0.00089284	-0.0011956	0.20338	0.136	0.0089602	0.027129	0.0518	-0.019256	4.5092e-05	-0.044534	-4.3266e-06	0.17	-0.036537	-0.021926	0.2284	-0.10951	0.057128	-0.013268	-0.00070844	-0.025473	-0.12602	-0.75151	-0.09844	-0.094041	0.05606	-0.19203	0.005493	0.039661	0.10407	0.24561	-0.10016	-0.39909	0.13509	0.028309	-0.040993	-0.033899	0.011337	-0.46252	0.0041567	
Deletion Peak  6 - CN values	4q22.1  	chr4:1-191154276(probes 4422:5367)            	chr4:91832276-91880563(probes 4847:4848)        	chr4:91444928-92590397(probes 4807:4889)        	0.0025494	    0.39948		Actual Copy Change Given	0.028214	0.026602	-0.24309	-0.032536	-0.0035608	-0.003186	-0.5151	-0.0048248	0.0059973	-0.015804	-0.0056278	-0.27368	0	-0.31231	0.0033373	0.0194	-0.87442	-0.073904	-0.012668	-0.50272	-0.40896	-0.013045	-0.29266	-0.008136	-0.0037276	-0.0026765	0	0.01776	-0.094351	-0.084637	-0.33836	0.012269	-0.59429	-0.0080731	-0.088758	0.027055	0.03593	0.027371	-1.136	-0.26	-0.20215	0.044757	0.0097332	-0.25171	-0.10283	-0.0178	-0.39306	0.25815	-0.44766	-0.21529	-0.55444	0.0056557	-0.0089391	0.023283	-0.28088	-0.88804	-0.39382	0.023575	0.026748	-0.018533	-0.23918	-0.22595	0.027271	0.023388	-0.29431	-1.5	-0.012733	-0.40747	-0.29913	-0.2342	-0.30994	-0.054505	0	0.022873	-0.62015	-0.011381	0.19505	-0.013149	-0.33939	-0.35046	0.0053823	-0.88119	-0.56555	-0.28512	-0.0045238	-0.083597	-0.015535	-0.3741	-0.18094	-0.25431	-0.2817	-0.53671	-0.19123	0.019066	-0.015351	0.17266	-0.43794	-0.54709	-0.57863	-0.72061	0.017088	-0.47032	-0.38455	0.0058233	-0.34267	-0.0047803	
Deletion Peak  7 - CN values	4q22.1  	chr4:92019515-92330029(probes 4864:4881)      	chr4:92063022-92069467(probes 4867:4868)        	chr4:91444928-92590397(probes 4807:4889)        	0.0001774	   0.063103		Actual Copy Change Given	0.028214	0.026602	-0.24309	-0.032536	-0.0035608	-0.003186	-0.5151	-0.0048248	0.0059973	-0.015804	-0.0056278	-0.27368	0	-0.31231	0.0033373	0.0194	-0.87442	-0.073904	-0.012668	-0.88362	-0.40896	-0.013045	-0.6371	-0.008136	-0.0037276	-0.0026765	0	0.01776	-0.094351	-0.084637	-0.33836	0.012269	-0.59429	-0.0080731	-0.088758	0.027055	0.03593	0.027371	-0.010025	0.013131	-0.20215	0.044757	0.0097332	-0.25171	-0.10283	-0.0178	-0.39306	-0.1792	-0.44766	-0.21529	-0.55444	-0.5539	-0.0089391	0.023283	-0.28088	-0.88804	-0.39382	0.023575	0.026748	-0.018533	-0.23918	-0.22595	0.027271	0.023388	-0.29431	-0.78672	-0.012733	-0.40747	-0.29913	-0.2342	-0.30994	-0.054505	0	0.022873	-0.62015	-0.011381	0.19505	-0.013149	-0.33939	-0.35046	0.0053823	-0.25042	-0.56555	-0.28512	-0.0045238	-0.083597	-0.015535	-0.3741	-0.18094	-0.25431	-1.1762	-0.11962	-0.19123	0.019066	-0.015351	0.17266	-0.43794	-0.54709	-0.57863	-0.72061	0.017088	-0.47032	-0.38455	0.0058233	-0.34267	-0.0047803	
Deletion Peak  8 - CN values	4q35.1  	chr4:178705323-191154276(probes 5312:5367)  	chr4:185382368-186651978(probes 5351:5353)    	chr4:170615979-191154276(probes 5267:5367)    	3.8874e-05	 0.00053589		Actual Copy Change Given	0.028214	0.026602	-0.25779	-0.032536	-0.0035608	-0.003186	-0.52111	-0.0048248	0.0059973	-0.015804	-0.0056278	-0.29359	0	0.0082559	-0.019406	0.016027	-0.92796	-0.099808	-0.012668	-1.1917	-0.16907	-0.013045	-0.29269	-0.008136	-0.053271	-0.0026765	0	-0.013918	-0.61695	-0.084637	-0.33836	0.012269	-0.34928	-0.0080731	-0.088758	0.027055	0.03593	0.027371	-0.010025	-0.29516	-0.20215	-0.19927	0.0097332	-0.34873	-0.093806	0.004817	-0.41271	-0.32456	-0.44766	-0.21529	-0.48275	-0.59939	-0.032662	0.023283	-0.99209	-0.81254	-0.59085	-0.019173	0.026748	-0.85957	-0.46703	-0.22595	0.027271	-0.052909	-0.46012	-0.0052218	-0.012733	-0.038025	-0.66241	-0.2342	-0.12346	-0.054505	-0.07463	-0.41647	0.13866	-0.011381	0.19505	-0.013149	-0.0096371	-0.95446	0.0053823	-0.25035	-0.070447	-0.061443	-0.014921	-0.083597	-0.015535	-0.41082	0	-0.35586	0.28875	-0.066144	-0.19123	0.019066	-0.015351	-0.62084	-0.56325	-0.66245	-0.61188	-0.72061	-0.35677	-0.082359	-0.38455	-0.80012	-0.34267	-0.0047803	
Deletion Peak  9 - CN values	5q12.1  	chr5:59050959-59380706(probes 5683:5702)      	chr5:59260455-59314804(probes 5696:5699)        	chr5:58324237-70943578(probes 5648:5783)        	5.7067e-06	 5.7067e-06		Actual Copy Change Given	0.0092605	0.015868	-0.25522	0.023161	-0.00077686	-0.0026963	0.51588	0.0015457	0.0099835	0	-0.0034487	-0.29028	0.010316	0.0069719	0	-0.64362	0.033137	-0.017626	2.1147e-05	-0.79617	-0.45254	-0.010467	-0.025228	-0.0078491	-0.0030638	-0.0029607	-0.10323	-0.0047033	0.1307	0	-0.33924	0.0001112	-1.0346	-0.0082273	-0.031985	0	0.029609	0.0086996	0.0069387	0.0082719	0.0089101	0.037653	-0.017474	-0.0024614	-0.28362	-0.28888	-0.39461	0.022149	-0.018195	-0.03795	0.0088581	-0.59099	-0.0012546	0.0070186	-0.57991	0.024809	-0.57986	-1.2399	0.0084034	0.0080791	-0.19052	-0.28339	0.0095476	0.026517	-0.82262	0.0092432	-0.013662	-0.02366	-0.31452	-0.035324	-0.33183	-0.080384	-0.52364	0.014395	-0.0016829	0.0056188	-0.040304	-0.00313	0	-0.87543	-0.0046384	-0.020245	0.34031	-0.34875	-0.0051641	-0.098562	-0.026087	-1.0769	-0.66426	0.011025	0.13883	-0.32071	-0.14124	0.0048659	-0.0039974	-0.5635	-1.1611	-0.54491	-0.55825	-0.74551	-0.33692	0.050309	-0.41795	-1.4196	-0.48343	-0.0020864	
Deletion Peak 10 - CN values	6p25.3  	chr6:1867395-2191114(probes 6315:6328)          	chr6:2066280-2115883(probes 6320:6321)            	chr6:1-2415753(probes 6298:6346)                    	0.00043209	 0.00043209		Actual Copy Change Given	-0.46036	0.015385	0.15868	0.281	-0.0038721	-0.0026702	0.0024259	0.0069822	0.01564	0.1245	0.0021885	0.18837	0.62632	0.0093517	0.00803	0.013245	-0.90884	-0.65115	-0.62329	-1.182	0.10812	0.40343	-0.54097	-0.0032155	0.005758	0.0058525	0.24586	0.00092935	-0.35003	-0.11025	-0.31917	-0.016374	0.432	0.00052995	-0.037673	-0.025808	0	0.013116	-0.016003	0.0067266	0.019958	-0.026697	-0.054577	0.15705	-0.372	0.0024196	-0.44807	0.049507	0.29713	0	0.0090599	-0.0046889	-0.0065979	0.005032	0.15821	-0.32199	0.086716	-0.81876	0.0091963	0.022229	-0.17875	-0.47412	0	-0.0013059	0.13074	-0.0077982	-0.007842	-0.0089537	0.19328	0.01091	-0.10473	0.044677	0.027532	-0.20169	0.0038199	-3.9013e-05	-0.039233	0	-0.13761	0.078472	0.0027651	-0.37665	-0.03704	-0.51482	0.01137	-0.050183	0.0080485	-0.20344	-0.27887	-0.32163	-0.77088	-0.41812	-0.22243	-0.0024918	0.00411	-0.67844	0.15123	0.22387	-0.65898	-0.8107	0	0.38879	0.24842	-1.3816	0.46826	0.015364	
Deletion Peak 11 - CN values	7q36.3  	chr7:129240874-159138663(probes 8470:8644)  	chr7:157883874-159138663(probes 8633:8644)    	chr7:155963837-159138663(probes 8607:8644)    	0.035007	   0.035007		Actual Copy Change Given	0	0.6428	0.016404	0.053273	0.14715	0.0045403	0.49176	-0.0024715	-0.0086341	-0.16308	-0.013199	0.20422	-0.058464	-0.0036097	0.020864	0.0052989	0.035535	0.223	0.0045061	-0.82708	0.075167	0.40542	-0.39337	0.29101	0.0087844	-0.0052788	-0.15051	-0.026104	-0.61219	0.015299	-0.51176	-0.21447	0.26748	0.34118	0.24804	0.11194	0.058929	0.0046484	-0.033982	-0.0025679	0.016407	0.0043025	-0.049862	-0.013851	0.035396	0.75912	-0.43722	-0.12852	0.35589	0.1854	-0.39619	0.38548	0.4038	-0.0013227	0.59029	-0.293	0.8524	0.025515	-0.0052976	0.030887	-0.080603	-0.28135	0.0092194	-0.22467	0.88618	0.81028	-0.49229	0.33623	-0.34632	0.21507	0.35664	-0.014322	0.54728	0	0	0.005776	0.030458	-0.0060768	-0.10116	0.80967	0.81269	1.5306	-0.018138	-0.01146	0.49853	-0.099968	0.036095	0.25819	0.054334	0.37575	-0.75279	0.23315	0.10668	0.0023634	0.01724	-0.62026	-0.62208	0.29523	0.54738	-0.16899	-0.24824	-0.54702	-0.40578	-0.081391	0.01124	0.62306	
Deletion Peak 12 - CN values	9p23    	chr9:9455034-9627050(probes 9883:9890)          	chr9:9504994-9520129(probes 9888:9889)            	chr9:8797943-10791437(probes 9858:9931)          	4.8155e-09	 7.1869e-09		Actual Copy Change Given	-0.0084945	-0.01263	-0.62153	-0.022306	-0.0075383	-0.40516	-1.0115	0.0046089	-0.56191	-0.18393	0.0013004	-0.27448	1.6985	-0.014791	-0.0018128	0.64828	0.027415	0.77162	0.00058802	-0.041097	-0.35556	-0.010181	-0.65448	-0.0020632	-0.0020258	-0.37296	-0.83109	0.0014627	-0.15512	-0.16544	-0.69375	-0.22936	0.059708	-0.45832	-0.062544	-0.034598	0.028558	-0.009691	-0.024732	-0.0066635	0.0050533	-0.0033508	0.093805	-0.47861	-0.30889	0.23037	-0.00025318	-0.22872	0	-0.025983	-0.3937	0.5878	-0.0058026	-0.012196	0.32768	-0.82448	-0.59326	-0.026416	-0.038087	-0.87014	-0.9273	-0.23884	-0.017046	-0.67515	-0.8427	-0.054122	-0.51608	-0.013427	-0.032765	-0.27354	0.17277	-0.017651	-0.57094	-0.39009	-0.013357	-0.010971	-0.030092	-0.94061	-0.87469	0.00026479	-0.81883	-0.02387	-0.58993	-0.42777	-0.00023419	-0.27705	-0.49532	-0.40443	0.068936	-0.034157	-1.5	-0.70055	-0.4871	-0.011259	-0.0072407	-0.58428	-0.84213	-0.26503	0.54587	-0.17822	-0.33785	0.51362	-0.71841	1.4568	0.41697	-0.0027104	
Deletion Peak 13 - CN values	9p21.3  	chr9:21852135-21983214(probes 10019:10026)    	chr9:21864827-21973073(probes 10020:10025)      	chr9:20912911-26919138(probes 9994:10068)       	9.9586e-09	 1.5618e-08		Actual Copy Change Given	-0.0084945	-0.01263	-0.2818	-0.022306	-0.0075383	0.002078	-0.51654	0.0046089	-0.014324	-0.18393	0.0013004	-0.27448	0.0023361	-0.014791	-0.0018128	0.64828	0.027415	-0.086503	0.00054331	-0.16156	-0.35556	-0.010181	-0.65448	-0.0020632	-0.0020258	-0.0045499	-0.42133	0.0014627	-0.15512	-0.16544	-0.34443	-0.22936	0.059708	-0.029225	-0.062544	-0.034598	0.46468	-0.009691	-0.024732	-0.0066635	-0.412	-0.0033508	-0.33984	-0.46624	-0.30889	0.23037	0.054262	-0.22872	0	-0.025983	-0.40717	-1.187	-0.0058026	-0.012196	0.32768	-0.027331	-1.2726	-1.2482	-0.012149	-0.86966	-0.57905	-0.23884	-0.017046	-0.0080697	-0.8427	-0.0028512	-1.0009	-0.013427	-0.032765	-0.27354	-0.8677	-0.017651	-0.57094	-0.39009	-1.2809	-0.010971	-0.030092	-0.04833	-0.1088	-1.5	0	-0.02387	-0.58993	-0.42777	-0.00023419	-0.27705	-0.0038674	-0.40443	-0.17708	0.051324	-0.93168	-1.3536	-0.4871	-0.011259	-0.0072407	-0.58428	-0.84213	-0.26503	0.54587	-1.5	-0.33785	0.48618	-0.28013	1.4568	0.41697	-0.0028062	
Deletion Peak 14 - CN values	10q23.31	chr10:88849958-89802725(probes 11204:11225)  	chr10:89547681-89744114(probes 11211:11219)    	chr10:88849958-90063549(probes 11204:11229)    	0.0048402	  0.0048402		Actual Copy Change Given	-0.0089105	-0.664	-0.275	-0.097063	0.033507	0	-1.0316	0	-0.011629	0.16977	-0.0024706	-0.26929	0.005716	-0.003942	-0.0040208	-0.02034	0	-0.08389	0	-0.38258	-0.16581	0.40591	-0.16396	0.0003706	-0.00086865	0.0036904	-0.016981	-1.3492	0.19829	-0.1808	0.23735	0.21158	-0.043355	-0.010082	0.01556	-0.20519	-0.30509	-0.015502	-0.0090419	-0.01149	0.0095809	-0.016188	-0.026139	-0.2747	0	0.34497	-0.45228	0.056932	0.13346	0.098638	0.00076393	-0.74829	0.0022562	-0.0096834	-0.41007	0.068489	-0.30061	-0.58762	-0.027337	-1.5	-0.47194	-0.31177	-0.022202	-0.015241	-0.81746	-0.014862	-0.0057484	-0.013623	0.33183	0.035524	0.16101	-0.14582	-0.57715	-0.037714	0.00056393	-0.00074595	-0.039182	0.0079788	0.069309	-0.86138	-0.014071	-0.031927	-0.37591	-0.1689	0	-0.070075	-0.53291	0	-0.2039	-0.12683	0.48463	-0.0077857	-0.22649	0.043399	-0.013143	0.04143	0.022892	-0.54281	-0.63745	-0.3186	-0.32569	0.0053967	-0.008359	-0.018375	-0.030272	-0.0029504	
Deletion Peak 15 - CN values	11q22.3 	chr11:97158304-135006516(probes 12378:12578)	chr11:109074641-109428223(probes 12437:12440)	chr11:107295068-128077799(probes 12425:12547)	0.075334	   0.075334		Actual Copy Change Given	0.013296	-0.0034523	-0.01245	-0.11848	0.017547	-0.0029576	-0.52626	-0.0016796	-0.0032036	-0.0036713	-0.0005017	0.2035	-0.74465	-0.33759	0.011123	-0.0022944	-0.88776	-0.49183	-0.0092653	-0.0051731	0.16832	0.40287	0.33076	-0.0057992	-0.0031631	0.0042166	-0.12081	0.66104	-0.090096	-0.072549	0.029915	-0.22663	0.011963	-0.0027471	-0.024692	0.012119	-0.0070432	-0.0013537	-0.0045939	-0.00077428	-0.0012705	0.0059995	-0.019782	-0.46149	-0.20298	-0.012083	-0.41858	0.02597	-0.1729	0.32378	-0.39454	-0.60801	0	0.0099878	0	-0.55026	-0.013138	0.02506	-0.0052003	-0.83383	0.23955	-0.2875	0.013378	0.013515	0.05452	-0.014035	0.48069	-0.42758	0	-0.088485	0.19271	0.035309	-0.56873	-0.40307	0.04745	-0.0069043	0.19271	-0.0040334	-0.39698	-0.87892	-0.003551	-0.060483	-0.057181	-0.024702	-0.0072716	0.077547	-0.040402	-0.14848	-0.20308	-0.12308	0.17289	0.030906	-0.19799	0.0073068	0	0.03772	1.1	-0.2532	0.67953	-0.51645	-0.00074192	0	-0.04032	-0.023416	-0.48099	-0.0055118	
Deletion Peak 16 - CN values	16q23.1 	chr16:78583111-78648685(probes 15926:15941)  	chr16:78620779-78636643(probes 15935:15938)    	chr16:78477442-79008568(probes 15897:15960)    	9.9586e-09	 9.9586e-09		Actual Copy Change Given	-0.07121	-0.75575	-0.26106	0.037881	-0.026871	0.010231	-0.00036065	-0.0078147	-0.61433	-0.17254	-0.003087	0.18333	-0.0068965	-0.34246	-1.1275	-0.055884	-0.94637	-0.14189	-0.00028849	-0.77712	-0.18567	0.42721	-0.56957	0.0075165	-0.0069363	0.0019846	0.22195	-0.014985	-0.36543	-0.041358	-0.99999	-0.23439	-0.38661	-0.013941	-0.30498	-0.33833	-0.056576	-0.046596	-0.023522	-0.029677	0.0025024	-0.03346	-0.056829	-0.033317	-1.1656	0.20476	-0.48009	-0.27833	0.018509	0.05021	-0.01194	-0.017379	-0.45585	-0.053904	-0.31482	-0.73176	0.0053248	-0.095506	-0.29778	0.072407	-0.3241	-0.32428	0.16813	-0.037819	0.041643	-0.75809	-0.48942	-0.011252	-0.35523	-0.27431	-0.40517	0.0046492	-0.11909	0.28417	0.0012512	0.0015313	0.18848	-0.48626	-1.2099	-0.64656	-0.02138	-0.79314	0.12124	-0.13518	-0.012578	-0.16066	-1.271	0.029944	-0.27034	-0.096869	-0.79267	-0.073805	0.24338	-0.032374	-0.018388	-0.80614	-0.32602	-0.21048	0.0048812	-0.028	-0.35581	-0.83386	-0.087382	-0.10248	0	-0.0096103	
Deletion Peak 17 - CN values	17q24.3 	chr17:70127295-70640568(probes 16629:16650)  	chr17:70477558-70521358(probes 16640:16641)    	chr17:70412496-70640568(probes 16634:16650)    	0.1106	     0.1106		Actual Copy Change Given	-0.016429	0.69953	0.048756	-0.0071687	-0.029879	0.014201	0.55443	-0.0015753	-0.010246	0.0034293	0.016992	-0.25174	0.76879	-0.00031003	-0.011321	-0.038902	-0.34164	0.95759	0.0031301	-0.77715	-0.15432	0	-0.36206	0.0079738	0.0048165	0.011627	0.54598	0.001958	0	0.028312	-0.35581	0.0052968	-0.24382	0.0042679	0.024499	-0.044941	-0.04258	-0.017495	0.0041651	0.011509	0.022746	-0.036725	0.027506	-0.023125	0.76436	0.044197	-0.00556	0.015875	0.056178	-0.25127	-0.0045599	0.59527	0.0034464	-0.0088321	0.18214	0.36322	-0.265	-0.69757	-0.019786	1.821	-0.12288	0.27114	-0.039297	-0.02835	0.16552	-0.774	-0.025474	-0.42757	-0.010538	0	0.16512	0.031449	-0.037014	0.3841	0.0096684	-0.014539	0.1966	0.0016659	0.5622	0.11829	0.0089463	0.0080208	-0.5268	0.064946	0.041693	-0.079705	0.067829	-0.059387	-0.29143	-0.035773	0.28096	-0.03602	0.043194	-0.024768	0.0085533	0.17662	-0.99878	0.32542	-0.26367	0.077296	0.3189	-0.066164	3.3864	-0.54492	0.50863	0.012556	
Deletion Peak 18 - CN values	18q21.2 	chr18:36926465-78077248(probes 17227:17410)  	chr18:48510732-49746888(probes 17293:17304)    	chr18:36926466-78077248(probes 17228:17410)    	0.00092452	 0.00092452		Actual Copy Change Given	-0.015144	-0.71154	-0.51474	0.5374	-0.011166	0.00028932	-0.019946	-0.021542	0.0012222	-0.1756	-0.0017474	0.70057	-0.74647	-0.33495	-0.0032852	-0.016568	-0.90194	-0.2689	-0.019872	-0.53168	-0.4746	0.094466	-0.65425	-0.0051343	-0.011999	-0.0014602	-0.12155	-0.016482	-0.35106	-0.16811	-0.36151	-0.22647	0.021978	-0.024015	-0.063413	-0.057755	-0.016985	-0.0066507	-0.035231	-0.0061167	-0.10622	-0.022575	0.12244	-0.49776	-0.48259	-0.27875	-0.42774	-0.21937	-0.1981	0.3834	-0.39762	-0.6025	-0.0145	-0.013842	-0.24802	-0.2784	-0.60617	0.047698	-0.011001	-0.015225	-0.26398	-0.033807	-0.0024652	-0.010609	-0.32506	-0.84151	-0.50378	0.30074	-0.33155	-0.26742	-0.35098	-0.14829	-1.1435	-0.31744	-0.0092568	-0.01697	-0.043446	-0.022189	-0.39681	0	-0.017955	0.097239	-0.57751	-0.23289	-0.036112	-0.078952	-0.63404	-0.025796	-0.44872	-0.30091	-0.71069	0.0033591	-0.27835	-0.0071281	-0.058845	-0.7667	-0.68054	-0.2479	0.51055	-0.76939	0.32572	-0.09664	-0.024715	-0.72957	-0.53083	-0.011648	
Deletion Peak 19 - CN values	20p12.1 	chr20:14610502-15179289(probes 18180:18203)  	chr20:14666951-15165122(probes 18189:18195)    	chr20:14643328-15183333(probes 18181:18205)    	0.029935	   0.029935		Actual Copy Change Given	-0.02338	-0.62372	0.43572	0.50293	0.12495	0.0043178	-0.049258	0.35868	-0.05014	0.33212	0.0003072	0.16589	-0.75846	-0.16935	0.73212	-0.077924	1.7422	0.22905	-0.018079	0.77206	0.29193	-0.023492	-1.266	0.0016898	0.0025414	0.14178	0.2119	0.6615	-0.45992	-0.11966	0.8464	-0.22878	0.72173	-0.002427	0.021551	0.33156	0.47534	-0.029745	0.0077916	-0.25829	0.01854	0.011083	-0.051617	0.38205	0.40958	0.20866	-0.021188	0.044979	0.62432	0.83491	-0.40683	0.61235	0.42276	-0.022224	0.95269	-0.49761	-0.92267	-0.022062	-0.035208	0.0075163	-0.012126	0.58373	-0.034768	0.010007	1.6407	0.80008	-0.35942	0.0036559	0.0070349	0.56702	0.14613	-0.12601	0.51279	0.19755	-0.095038	-0.062763	0.21982	-0.35519	0.097783	-0.86521	0.80261	0.65338	0.30113	-0.081421	-0.0091721	0.059819	0.50576	1.127	0.24968	-0.20717	-0.74125	-0.61815	0.27049	-0.025528	-0.014251	0.59149	0.16154	-0.38058	0.86439	-0.04831	0.014333	0.51049	-0.068885	-1.4386	-0.93354	0.59768	
Deletion Peak 20 - CN values	22q13.31	chr22:44516646-51304566(probes 19231:19275)  	chr22:46244263-51304566(probes 19252:19275)    	chr22:45576203-51304566(probes 19246:19275)    	0.034187	   0.034187		Actual Copy Change Given	-0.017237	0.61953	-0.56539	-0.043577	0.11575	0.026875	-0.51428	0.0016339	-0.024348	-0.18559	0.0097596	-0.25695	-0.61393	0.00082056	-0.015549	-0.087245	-0.37246	0.07058	0.012832	-0.22982	-0.29284	-0.00031289	-0.080411	0.0086933	0.0044852	0.0078247	0.20311	-0.019551	-0.3553	-0.012501	-0.75949	-0.21318	-0.21641	0.00052065	0.0028077	-0.089789	-0.063288	-0.036055	-0.010146	0.004309	-0.005789	-0.039291	0.0065581	-0.44372	-0.31055	0.012291	-0.0022717	-0.050552	-0.50828	-0.050681	-0.4375	-0.015016	0.0007358	-0.027948	0.1769	-0.82924	-0.12558	-0.29246	-0.039061	0.8733	-0.19019	-0.048889	-0.045182	-0.040112	-0.39101	0.028038	-0.025137	-0.0038602	0.39843	-0.29204	-0.13297	-0.0073739	-0.13563	-0.045477	-0.0028403	-0.013403	-0.060928	0.013953	-0.36681	-0.23024	0.0024021	0.015161	0.11947	-0.46964	0.02587	-0.060664	0.023177	-0.41577	-0.2879	-0.087849	-0.7609	0.13557	0.097998	-0.032484	-0.086329	-0.65599	-0.97914	-0.19085	-0.66706	0.2388	-0.35795	-0.071345	-0.4032	-0.79842	-0.46257	-0.0068817	
