		Clinical Features	CN_CNMF		METHLYATION_CNMF		RPPA_CNMF		RPPA_CHIERARCHICAL		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL		MIRSEQ_MATURE_CNMF		MIRSEQ_MATURE_CHIERARCHICAL	
	nCNV (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
1p	7 (1%)	487	4.6185e-05	0.0133	0.24173	1	0.78004	1	0.28386	1	0.41665	1	0.26418	1	0.06482	1	0.084015	1	0.10458	1	0.070504	1
1q	27 (5%)	467	1.6387e-08	6.01e-06	0.31412	1	0.0083697	1	0.25088	1	0.011992	1	0.021877	1	0.23504	1	0.17912	1	0.19065	1	0.13876	1
2p	12 (2%)	482	5.8584e-14	2.25e-11	3.3842e-05	0.00995	0.60277	1	0.0094301	1	0.00014227	0.0378	1.5448e-05	0.00482	2.5653e-05	0.00777	2.2054e-06	0.000754	3.125e-06	0.00104	2.7122e-06	0.000911
2q	11 (2%)	483	2.9879e-14	1.15e-11	0.00016135	0.0421	0.56188	1	0.067984	1	0.00042402	0.0996	7.2241e-05	0.0201	6.4474e-05	0.0181	7.0301e-06	0.00228	0.00018824	0.0484	7.4376e-06	0.00241
3p	6 (1%)	488	6.8691e-08	2.5e-05	0.026273	1	1	1	0.65505	1	0.052378	1	0.012774	1	0.009288	1	0.0065835	1	0.025931	1	0.0066445	1
3q	6 (1%)	488	6.8691e-08	2.5e-05	0.0013892	0.278	1	1	0.25012	1	0.0049028	0.804	0.00090922	0.193	0.0007392	0.16	0.00030833	0.0755	0.0023653	0.428	0.00028042	0.069
4p	7 (1%)	487	3.9413e-09	1.47e-06	0.00034264	0.0826	0.32096	1	0.11797	1	0.0016528	0.328	0.00019024	0.0487	0.0031635	0.557	0.0019635	0.379	0.0095409	1	0.001992	0.379
4q	7 (1%)	487	3.9413e-09	1.47e-06	0.00034264	0.0826	0.32096	1	0.11797	1	0.0016528	0.328	0.00019024	0.0487	0.0031635	0.557	0.0019635	0.379	0.0095409	1	0.001992	0.379
5p	22 (4%)	472	3.2654e-22	1.29e-19	0.0026539	0.478	0.53006	1	0.096938	1	0.018406	1	0.00076835	0.165	0.012156	1	0.0020624	0.379	0.0044987	0.751	0.0013688	0.275
5q	17 (3%)	477	1.7646e-22	7.01e-20	3.3891e-05	0.00995	0.84992	1	0.0074483	1	0.00033759	0.082	9.2182e-06	0.00297	0.00034409	0.0826	4.1144e-05	0.012	9.5987e-05	0.026	3.178e-05	0.00944
6p	6 (1%)	488	6.6062e-06	0.00216	0.0050459	0.822	0.45688	1	0.65505	1	0.074123	1	0.012774	1	0.009288	1	0.0065835	1	0.025931	1	0.0066445	1
6q	8 (2%)	486	3.9763e-06	0.00131	0.00097517	0.205	0.077399	1	0.43163	1	0.011941	1	0.0019815	0.379	0.0010616	0.219	0.00057309	0.13	0.0034405	0.588	0.00058696	0.131
7p	18 (4%)	476	6.2891e-24	2.5e-21	7.1865e-05	0.0201	0.66044	1	0.0021938	0.401	0.00033759	0.082	9.2182e-06	0.00297	0.0010462	0.217	0.00012147	0.0327	0.00025857	0.0644	7.6101e-05	0.0211
7q	20 (4%)	474	6.9205e-25	2.76e-22	9.8206e-06	0.00311	0.57088	1	0.0006759	0.149	6.0144e-05	0.0171	1.1338e-06	0.000398	0.00014406	0.0382	1.1525e-05	0.00362	4.3818e-05	0.0126	9.0622e-06	0.00293
8p	10 (2%)	484	1.5769e-08	5.8e-06	0.025625	1	0.87911	1	0.24618	1	0.086595	1	0.016192	1	0.046489	1	0.010374	1	0.0077147	1	0.0079003	1
8q	11 (2%)	483	7.2334e-10	2.71e-07	0.024336	1	0.87911	1	0.24618	1	0.18745	1	0.032983	1	0.068765	1	0.026035	1	0.030424	1	0.030534	1
9p	22 (4%)	472	1.7903e-14	6.91e-12	0.013367	1	0.62925	1	0.4924	1	0.013657	1	0.0027376	0.487	0.014965	1	0.0062373	1	0.020283	1	0.0042218	0.709
9q	28 (6%)	466	1.1321e-16	4.45e-14	0.047634	1	0.43242	1	0.1016	1	0.095147	1	0.006217	1	0.041561	1	0.028374	1	0.052332	1	0.018196	1
10p	9 (2%)	485	1.169e-11	4.47e-09	0.0019883	0.379	1	1	0.25012	1	0.0032981	0.567	0.00067867	0.149	0.0003518	0.0837	0.00016433	0.0427	0.00122	0.246	0.00017081	0.0442
10q	8 (2%)	486	2.1851e-10	8.26e-08	0.0036868	0.623	1	1	0.28386	1	0.0087844	1	0.0019815	0.379	0.0010616	0.219	0.00057309	0.13	0.0034405	0.588	0.00058696	0.131
11p	13 (3%)	481	1.8054e-11	6.88e-09	0.00018561	0.0479	0.38997	1	0.43163	1	0.00025881	0.0644	9.2629e-05	0.0253	0.00015733	0.0412	2.6035e-05	0.00786	2.4798e-05	0.00754	2.6309e-05	0.00792
11q	14 (3%)	480	2.2356e-10	8.43e-08	0.00074581	0.161	0.44563	1	0.25709	1	0.0023403	0.426	0.00024844	0.0621	6.0506e-05	0.0171	8.6167e-05	0.0237	9.6452e-06	0.00307	7.6101e-05	0.0211
12p	15 (3%)	479	2.1371e-16	8.38e-14	1.3215e-06	0.000461	0.84992	1	0.0074483	1	9.2946e-06	0.00297	3.6132e-07	0.00013	2.2412e-05	0.00686	2.8717e-06	0.000959	3.6316e-06	0.0012	2.6582e-06	0.000898
12q	15 (3%)	479	2.1371e-16	8.38e-14	1.3215e-06	0.000461	0.84992	1	0.0074483	1	9.2946e-06	0.00297	3.6132e-07	0.00013	2.2412e-05	0.00686	2.8717e-06	0.000959	3.6316e-06	0.0012	2.6582e-06	0.000898
13q	19 (4%)	475	5.9677e-07	0.000211	0.00073536	0.16	0.39073	1	0.28804	1	0.00030872	0.0755	8.6851e-05	0.0238	0.0070204	1	0.0019676	0.379	0.0050775	0.823	0.0019827	0.379
14q	12 (2%)	482	2.1328e-11	8.1e-09	3.3842e-05	0.00995	1	1	0.079008	1	0.00023454	0.0591	1.5448e-05	0.00482	0.00014617	0.0386	4.796e-05	0.0137	0.00050754	0.117	4.2516e-05	0.0123
15q	8 (2%)	486	5.6338e-05	0.0161	0.00013927	0.0372	0.1933	1	0.12606	1	0.00072283	0.158	4.1433e-05	0.012	6.4312e-05	0.0181	1.9869e-05	0.00612	0.00024177	0.0607	1.749e-05	0.00542
16p	16 (3%)	478	3.0854e-19	1.22e-16	0.00010217	0.0276	0.43242	1	0.044418	1	0.00048995	0.114	3.1121e-05	0.00927	0.00051927	0.118	0.00012948	0.0347	6.9527e-05	0.0195	9.2995e-05	0.0253
16q	15 (3%)	479	4.0876e-17	1.61e-14	0.0016467	0.328	0.63317	1	0.37398	1	0.0028609	0.506	0.0007717	0.165	0.0067356	1	0.001812	0.353	0.00061816	0.137	0.0016682	0.328
17p	24 (5%)	470	5.121e-15	1.99e-12	2.1376e-06	0.000733	0.68934	1	0.00055815	0.127	3.3519e-05	0.00989	3.9385e-07	0.00014	1.8017e-05	0.00557	2.0654e-06	0.000711	1.3835e-05	0.00433	1.4624e-06	0.000507
17q	22 (4%)	472	5.6704e-15	2.19e-12	2.2246e-06	0.000759	0.63317	1	0.0027126	0.486	2.9247e-05	0.00877	3.6373e-07	0.00013	2.0519e-05	0.0063	2.0275e-06	0.000699	1.0618e-05	0.00336	1.6371e-06	0.000566
18p	10 (2%)	484	3.556e-10	1.34e-07	0.025625	1	0.63454	1	0.12606	1	0.011535	1	0.0079677	1	0.046489	1	0.010374	1	0.00042639	0.0998	0.0079003	1
18q	10 (2%)	484	3.556e-10	1.34e-07	0.025625	1	0.63454	1	0.12606	1	0.011535	1	0.0079677	1	0.046489	1	0.010374	1	0.00042639	0.0998	0.0079003	1
19p	13 (3%)	481	1.0771e-10	4.08e-08	3.339e-07	0.00012	1	1	0.043324	1	2.452e-06	0.000831	1.0972e-07	3.97e-05	4.0623e-07	0.000144	4.3239e-08	1.58e-05	1.2458e-06	0.000436	4.3714e-08	1.6e-05
19q	11 (2%)	483	1.0844e-12	4.15e-10	4.6751e-06	0.00153	0.56009	1	0.052094	1	2.9901e-05	0.00894	1.0464e-06	0.000368	2.8245e-06	0.000946	3.1043e-07	0.000112	6.9963e-06	0.00228	4.3738e-07	0.000155
20p	12 (2%)	482	1.4228e-15	5.55e-13	0.00037642	0.0892	0.79533	1	0.01926	1	0.003195	0.557	0.00020214	0.0513	0.0046578	0.773	0.0011071	0.226	0.00050754	0.117	0.00098134	0.205
20q	12 (2%)	482	1.4228e-15	5.55e-13	0.00037642	0.0892	0.79533	1	0.01926	1	0.003195	0.557	0.00020214	0.0513	0.0046578	0.773	0.0011071	0.226	0.00050754	0.117	0.00098134	0.205
21q	13 (3%)	481	3.7981e-09	1.42e-06	0.056231	1	1	1	0.079008	1	0.086819	1	0.06897	1	0.047762	1	0.1054	1	0.0071538	1	0.036574	1
22q	88 (18%)	406	1.8959e-90	7.58e-88	1.1341e-05	0.00357	0.12299	1	0.15013	1	6.0335e-09	2.23e-06	3.3309e-05	0.00986	0.00079224	0.169	0.00026185	0.0647	2.3914e-06	0.000813	0.00015508	0.0408
xq	12 (2%)	482	4.0815e-09	1.51e-06	0.00094677	0.2	0.70665	1	0.042514	1	0.0087326	1	0.0018482	0.359	0.038518	1	0.0096942	1	0.058707	1	0.010579	1
