Clinical Features	CN_CNMF		METHLYATION_CNMF		RPPA_CNMF		RPPA_CHIERARCHICAL		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL		MIRSEQ_MATURE_CNMF		MIRSEQ_MATURE_CHIERARCHICAL	
	nCNV (%)	nWild-Type	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
1p	69 (31%)	152	0.025868	1	0.51323	1	0.3754	1	0.11986	1	0.78111	1	0.52308	1	0.44714	1	0.043523	1	0.93347	1	0.61089	1
1q	90 (41%)	131	0.28635	1	0.85125	1	0.8789	1	0.75359	1	0.78333	1	0.20244	1	0.69795	1	0.15217	1	0.98173	1	0.6974	1
2p	89 (40%)	132	5.8434e-08	2.31e-05	0.020007	1	0.53151	1	0.88814	1	0.027931	1	0.043327	1	0.1068	1	0.069157	1	0.35872	1	0.0062987	1
2q	81 (37%)	140	2.2735e-06	0.000894	0.0049179	1	0.77721	1	0.82361	1	0.041301	1	0.058538	1	0.80777	1	0.63633	1	0.85103	1	0.081964	1
3p	104 (47%)	117	0.00083646	0.309	0.63529	1	0.096786	1	0.35106	1	0.60027	1	0.3664	1	0.038686	1	0.1119	1	0.00017516	0.0662	0.032224	1
3q	109 (49%)	112	0.00057345	0.213	0.84085	1	0.5819	1	0.70675	1	0.5475	1	0.62235	1	0.015	1	0.030381	1	0.00011745	0.0445	0.010521	1
4p	100 (45%)	121	4.8023e-05	0.0184	0.088639	1	0.85188	1	0.80032	1	0.36352	1	0.22	1	0.57523	1	0.37726	1	0.4214	1	0.81536	1
4q	94 (43%)	127	1.5861e-05	0.00617	0.072875	1	0.5331	1	0.63136	1	0.21386	1	0.13082	1	0.23606	1	0.39368	1	0.079315	1	0.63129	1
5p	125 (57%)	96	0.00011491	0.0437	0.081855	1	0.34823	1	0.13404	1	0.14938	1	0.13943	1	0.1633	1	0.24514	1	0.25015	1	0.21962	1
5q	115 (52%)	106	0.00029733	0.111	0.073228	1	0.33366	1	0.75103	1	0.024271	1	0.0039084	1	0.11274	1	0.067955	1	0.04574	1	0.13694	1
6p	87 (39%)	134	0.00086641	0.32	0.01603	1	0.76314	1	0.36211	1	0.78905	1	0.63068	1	0.10943	1	0.14866	1	0.48198	1	0.7216	1
6q	99 (45%)	122	3.2503e-06	0.00127	0.0068536	1	0.86964	1	0.97042	1	0.63547	1	0.58964	1	0.27865	1	0.075024	1	0.21358	1	0.48079	1
7p	102 (46%)	119	5.7519e-05	0.022	0.0011338	0.413	0.046082	1	0.91676	1	0.3909	1	0.68302	1	0.15852	1	0.18345	1	0.059045	1	0.20849	1
7q	95 (43%)	126	0.00010294	0.0392	0.0072361	1	0.3055	1	0.90007	1	0.53204	1	0.20985	1	0.33385	1	0.25799	1	0.16425	1	0.69374	1
8p	143 (65%)	78	0.00021306	0.0803	0.0057668	1	0.89589	1	0.50181	1	0.0033264	1	0.29085	1	0.080911	1	0.11698	1	0.015624	1	0.067699	1
8q	122 (55%)	99	0.063641	1	0.01375	1	0.40483	1	0.1898	1	0.40239	1	0.86393	1	0.47798	1	0.090505	1	0.30639	1	0.52068	1
9p	128 (58%)	93	0.027469	1	0.24898	1	0.064145	1	0.2773	1	0.55837	1	0.11841	1	0.78939	1	0.39582	1	0.88033	1	0.93568	1
9q	116 (52%)	105	0.072855	1	0.35371	1	0.17286	1	0.54586	1	0.437	1	0.034446	1	0.76724	1	0.70908	1	0.64761	1	0.5509	1
10p	105 (48%)	116	2.2245e-09	8.88e-07	0.0099386	1	0.38852	1	0.71998	1	0.044211	1	0.80766	1	0.36063	1	0.41737	1	0.071782	1	0.10493	1
10q	93 (42%)	128	9.9416e-06	0.00388	0.00027844	0.104	0.41027	1	0.94403	1	0.2366	1	0.14487	1	0.20037	1	0.095615	1	0.45765	1	0.1902	1
11p	110 (50%)	111	2.226e-07	8.79e-05	0.0043554	1	0.30087	1	0.55436	1	0.19922	1	0.19227	1	0.12564	1	0.30763	1	0.25938	1	0.89857	1
11q	98 (44%)	123	6.1662e-09	2.45e-06	0.036143	1	0.066082	1	0.21982	1	0.06806	1	0.70338	1	0.63667	1	0.89165	1	0.30579	1	0.85281	1
12p	88 (40%)	133	0.00028593	0.107	0.082241	1	0.83107	1	0.66907	1	0.52083	1	0.50442	1	0.56659	1	0.2643	1	0.60636	1	0.1425	1
12q	77 (35%)	144	0.0015456	0.561	0.090529	1	0.64527	1	0.24512	1	0.75349	1	0.51189	1	0.15357	1	0.050625	1	0.42747	1	0.18474	1
13q	104 (47%)	117	0.0072459	1	0.33669	1	0.022255	1	0.03644	1	0.081774	1	0.85233	1	0.85285	1	0.3599	1	0.62735	1	0.3876	1
14q	99 (45%)	122	0.00099874	0.367	0.017764	1	0.45759	1	0.2239	1	0.038115	1	0.75965	1	0.050829	1	0.22715	1	0.29796	1	0.75928	1
15q	96 (43%)	125	0.031361	1	0.092235	1	0.2001	1	0.70462	1	0.076801	1	0.38368	1	0.18858	1	0.25762	1	0.20063	1	0.26032	1
16p	96 (43%)	125	2.1359e-05	0.00829	0.039764	1	0.29837	1	0.22651	1	0.16594	1	0.46318	1	0.84454	1	0.39368	1	0.33167	1	0.41409	1
16q	100 (45%)	121	2.9736e-06	0.00117	0.037999	1	0.38842	1	0.41817	1	0.13127	1	0.79327	1	0.3965	1	0.18345	1	0.71703	1	0.23294	1
17p	129 (58%)	92	2.7509e-05	0.0106	0.19902	1	0.90692	1	0.62697	1	0.0504	1	0.80752	1	0.26858	1	0.038579	1	0.93454	1	0.65994	1
17q	103 (47%)	118	0.00091661	0.337	0.064984	1	0.1483	1	0.45115	1	0.041688	1	0.095689	1	0.029252	1	0.0059296	1	0.042908	1	0.03839	1
18p	117 (53%)	104	9.0346e-09	3.59e-06	0.0055707	1	0.55189	1	0.65061	1	0.033074	1	0.71558	1	1	1	0.64805	1	0.37477	1	0.57285	1
18q	110 (50%)	111	3.6721e-05	0.0141	0.021534	1	0.28054	1	0.33291	1	0.35633	1	0.85376	1	0.35064	1	0.061068	1	0.35082	1	0.75335	1
19p	101 (46%)	120	2.9415e-05	0.0114	0.083365	1	0.91957	1	0.70012	1	0.08017	1	0.137	1	0.14687	1	0.020509	1	0.53426	1	0.65138	1
19q	108 (49%)	113	6.3546e-07	0.00025	0.0058585	1	0.64887	1	0.87032	1	0.71161	1	0.41434	1	0.2357	1	0.18614	1	0.65976	1	0.3542	1
20p	128 (58%)	93	0.0011103	0.406	0.092984	1	0.84444	1	0.20846	1	0.89473	1	0.073674	1	0.25737	1	0.0093367	1	0.021404	1	0.050459	1
20q	133 (60%)	88	0.00024897	0.0936	0.032146	1	0.57809	1	0.37867	1	0.68337	1	0.23226	1	0.29416	1	0.045842	1	0.037637	1	0.2913	1
21q	102 (46%)	119	3.3383e-05	0.0129	0.037262	1	0.88006	1	0.33356	1	0.32349	1	0.97069	1	0.0074236	1	0.0015971	0.578	0.31508	1	0.067367	1
22q	116 (52%)	105	4.2419e-10	1.7e-07	0.00026302	0.0986	0.82505	1	0.076842	1	0.050872	1	0.45826	1	0.33971	1	0.099537	1	0.25428	1	0.027208	1
xq	71 (32%)	150	0.0011305	0.413	0.0072911	1	0.83955	1	0.84706	1	0.01858	1	0.41421	1	0.075464	1	0.54822	1	0.35249	1	0.40856	1