Clinical Features Time to Death AGE NEOPLASM.DISEASESTAGE PATHOLOGY.T.STAGE PATHOLOGY.N.STAGE PATHOLOGY.M.STAGE GENDER HISTOLOGICAL.TYPE RADIATIONS.RADIATION.REGIMENINDICATION NUMBER.OF.LYMPH.NODES nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q 1p gain 175 (18%) 782 0.13189 1 0.092462 1 0.99017 1 0.33624 1 0.3326 1 0.93195 1 1 1 0.007561 1 0.0099544 1 0.51452 1 1q gain 613 (64%) 344 0.24301 1 0.43741 1 0.042721 1 0.0055513 1 0.68057 1 0.8582 1 0.75242 1 0.017205 1 0.71157 1 0.99124 1 2p gain 107 (11%) 850 0.1776 1 0.89751 1 0.58841 1 0.69371 1 0.95427 1 0.96863 1 0.61357 1 0.00015649 0.123 0.31173 1 0.20508 1 2q gain 66 (7%) 891 0.39211 1 0.57085 1 0.64757 1 0.34559 1 0.83218 1 0.89835 1 1 1 0.096038 1 0.67494 1 0.32955 1 3p gain 129 (13%) 828 0.22475 1 0.10318 1 0.12538 1 0.069112 1 0.31714 1 0.0027458 1 1 1 0.0099281 1 0.67805 1 0.77039 1 3q gain 189 (20%) 768 0.40484 1 0.36906 1 0.7794 1 0.23639 1 0.5518 1 0.1148 1 0.69647 1 1.6263e-05 0.0128 0.18232 1 0.14008 1 4p gain 69 (7%) 888 0.051137 1 0.7326 1 0.18411 1 0.10706 1 0.76062 1 0.2341 1 0.52858 1 0.021925 1 0.78516 1 0.85235 1 4q gain 64 (7%) 893 0.024433 1 0.92154 1 0.17046 1 0.14019 1 0.59262 1 0.27675 1 0.50121 1 0.002335 1 1 1 0.88497 1 5p gain 274 (29%) 683 0.10121 1 0.11621 1 0.44877 1 0.50103 1 0.0022796 1 0.048467 1 0.48408 1 0.42694 1 0.18281 1 0.63791 1 5q gain 185 (19%) 772 0.5667 1 0.024832 1 0.512 1 0.25964 1 0.24318 1 0.23554 1 1 1 0.6588 1 0.41895 1 0.63712 1 6p gain 180 (19%) 777 0.17278 1 0.88487 1 0.64218 1 0.13259 1 0.52585 1 0.80609 1 0.69774 1 0.00016277 0.127 0.10245 1 0.78902 1 6q gain 129 (13%) 828 0.15383 1 0.67632 1 0.7336 1 0.11609 1 0.093186 1 1 1 1 1 0.00022878 0.179 0.40637 1 0.84353 1 7p gain 274 (29%) 683 0.65609 1 0.23458 1 0.84363 1 0.76812 1 0.77827 1 0.81482 1 0.037225 1 0.16685 1 0.18281 1 0.58119 1 7q gain 229 (24%) 728 0.76542 1 0.86346 1 0.48004 1 0.54686 1 0.50377 1 0.73692 1 0.2626 1 0.25234 1 1 1 0.85942 1 8p gain 253 (26%) 704 0.91264 1 0.6221 1 0.51483 1 0.7784 1 0.79377 1 0.3326 1 0.72939 1 0.74881 1 0.68759 1 0.89679 1 8q gain 471 (49%) 486 0.55041 1 0.85652 1 0.31915 1 0.87984 1 0.36009 1 0.080047 1 0.54084 1 7.4782e-06 0.00592 0.019174 1 0.82602 1 9p gain 123 (13%) 834 0.71767 1 0.81569 1 0.32721 1 0.73007 1 0.10569 1 0.72714 1 0.62592 1 0.67068 1 1 1 0.32821 1 9q gain 107 (11%) 850 0.15842 1 0.68668 1 0.67576 1 0.49967 1 0.16197 1 0.90879 1 0.61357 1 0.3226 1 0.57411 1 0.63911 1 10p gain 189 (20%) 768 0.62452 1 0.82793 1 0.24305 1 0.26392 1 0.37066 1 0.23915 1 0.69647 1 0.00054026 0.42 0.074299 1 0.99343 1 10q gain 109 (11%) 848 0.82204 1 0.57725 1 0.30875 1 0.23785 1 0.74319 1 0.55227 1 0.61465 1 0.19743 1 0.093194 1 0.41505 1 11p gain 123 (13%) 834 0.84264 1 0.92033 1 0.95883 1 0.51661 1 0.29844 1 0.97399 1 1 1 0.020313 1 0.67302 1 0.1613 1 11q gain 86 (9%) 871 0.32748 1 0.90668 1 0.22093 1 0.59612 1 0.30326 1 0.65225 1 1 1 0.0028641 1 0.80504 1 0.52362 1 12p gain 202 (21%) 755 0.33376 1 0.76032 1 0.6821 1 0.13695 1 0.1544 1 0.47447 1 0.039839 1 0.031689 1 0.19232 1 0.12767 1 12q gain 168 (18%) 789 0.22501 1 0.34938 1 0.16085 1 0.058477 1 0.01474 1 0.13439 1 0.018642 1 0.16508 1 0.30519 1 0.08427 1 13q gain 82 (9%) 875 0.70852 1 0.29898 1 0.62506 1 0.45787 1 0.60699 1 0.1515 1 1 1 0.020995 1 0.31339 1 0.36807 1 14q gain 130 (14%) 827 0.57109 1 0.10597 1 0.20866 1 0.0975 1 0.10158 1 0.76155 1 0.37399 1 0.38035 1 0.75604 1 0.1547 1 15q gain 83 (9%) 874 0.40988 1 0.79718 1 0.57349 1 0.82525 1 0.88435 1 0.61559 1 0.59817 1 0.019548 1 0.25706 1 0.43671 1 16p gain 426 (45%) 531 0.88752 1 0.011761 1 0.69415 1 0.81729 1 0.45552 1 0.89222 1 0.75826 1 0.080844 1 0.39241 1 0.56625 1 16q gain 119 (12%) 838 0.093117 1 0.46414 1 0.17442 1 0.22036 1 0.30788 1 0.24417 1 0.11704 1 0.1063 1 0.74725 1 0.7076 1 17p gain 96 (10%) 861 0.081668 1 0.60442 1 0.17124 1 0.011096 1 0.18007 1 0.37475 1 0.0015387 1 0.24211 1 0.024572 1 0.62625 1 17q gain 197 (21%) 760 0.037811 1 0.57616 1 0.76433 1 0.19037 1 0.8932 1 0.23734 1 0.00097018 0.749 0.18478 1 0.053708 1 0.86737 1 18p gain 149 (16%) 808 0.44339 1 0.11846 1 0.098401 1 0.4647 1 0.035329 1 0.12755 1 0.65972 1 0.023333 1 0.17056 1 0.55879 1 18q gain 129 (13%) 828 0.93097 1 0.44772 1 0.1751 1 0.47156 1 0.1969 1 0.023275 1 0.63248 1 0.12257 1 0.29933 1 0.91232 1 19p gain 159 (17%) 798 0.68113 1 0.828 1 0.36799 1 0.18939 1 0.29137 1 0.087235 1 0.014753 1 0.28265 1 0.12694 1 0.284 1 19q gain 191 (20%) 766 0.31268 1 0.050851 1 0.39718 1 0.75904 1 0.15265 1 0.012171 1 0.031761 1 0.68239 1 0.32862 1 0.061742 1 20p gain 365 (38%) 592 0.29717 1 0.31786 1 0.292 1 0.62394 1 0.01822 1 0.0089023 1 0.049328 1 1.1808e-06 0.000941 0.010515 1 0.67457 1 20q gain 396 (41%) 561 0.3647 1 0.94956 1 0.43087 1 0.069027 1 0.10527 1 0.010039 1 0.33375 1 8.5279e-08 6.81e-05 0.097608 1 0.44088 1 21q gain 178 (19%) 779 0.0070376 1 0.058449 1 0.59682 1 0.6847 1 0.57978 1 0.24385 1 1 1 0.0010546 0.811 0.022622 1 0.22875 1 22q gain 85 (9%) 872 0.17092 1 0.90849 1 0.24541 1 0.16031 1 0.51075 1 0.32287 1 1 1 0.006251 1 0.38274 1 0.4691 1 xq gain 127 (13%) 830 0.21074 1 0.20455 1 0.39889 1 0.23194 1 0.84501 1 0.082287 1 1 1 0.00057106 0.443 0.17397 1 0.71134 1 1p loss 221 (23%) 736 0.020383 1 0.0030214 1 6.2133e-06 0.00493 1.1066e-05 0.00873 0.00075124 0.581 0.34488 1 1 1 0.4235 1 0.5558 1 0.0056444 1 1q loss 50 (5%) 907 0.37821 1 0.43348 1 0.91509 1 0.34329 1 0.054433 1 0.21296 1 1 1 0.43959 1 1 1 0.78499 1 2p loss 161 (17%) 796 0.85088 1 0.35334 1 0.39174 1 0.4612 1 0.044901 1 0.12866 1 1 1 0.54788 1 0.017741 1 0.53027 1 2q loss 182 (19%) 775 0.35613 1 0.57906 1 0.17069 1 0.42695 1 0.047325 1 0.10945 1 0.69731 1 0.43337 1 0.086426 1 0.27898 1 3p loss 164 (17%) 793 0.43146 1 0.049023 1 0.89953 1 0.003091 1 0.9473 1 0.6006 1 0.22609 1 0.033168 1 0.010912 1 0.81828 1 3q loss 90 (9%) 867 0.10797 1 0.27092 1 0.36831 1 0.0010497 0.808 0.7668 1 0.74068 1 0.61123 1 0.11391 1 0.027964 1 0.19919 1 4p loss 309 (32%) 648 0.32895 1 0.61352 1 0.36547 1 0.037217 1 0.48792 1 0.44849 1 1 1 5.6799e-06 0.00452 0.54388 1 0.91845 1 4q loss 276 (29%) 681 0.87195 1 0.91126 1 0.64839 1 0.068258 1 0.54838 1 0.36058 1 0.29672 1 8.356e-05 0.0656 0.34851 1 0.92265 1 5p loss 129 (13%) 828 0.15515 1 0.0097775 1 0.22655 1 0.044443 1 0.84905 1 0.88071 1 1 1 4.1822e-06 0.00333 0.21297 1 0.73025 1 5q loss 203 (21%) 754 0.35555 1 0.0021484 1 0.26872 1 0.011809 1 0.31397 1 0.58599 1 0.13164 1 2.6208e-10 2.09e-07 0.3853 1 0.22754 1 6p loss 168 (18%) 789 0.83157 1 0.041026 1 0.96391 1 0.61772 1 0.79591 1 0.015504 1 1 1 0.73697 1 0.11303 1 0.04924 1 6q loss 244 (25%) 713 0.46479 1 0.00029168 0.228 0.90546 1 0.42092 1 0.44445 1 0.25132 1 0.4665 1 0.79425 1 0.0091158 1 0.16782 1 7p loss 98 (10%) 859 0.52488 1 0.94912 1 0.3321 1 0.55923 1 0.0151 1 0.25083 1 0.61071 1 0.024213 1 0.2418 1 0.037925 1 7q loss 107 (11%) 850 0.12605 1 0.28474 1 0.37295 1 0.6777 1 0.14139 1 0.093869 1 0.61357 1 0.21891 1 0.43139 1 0.027874 1 8p loss 356 (37%) 601 0.03872 1 0.2509 1 0.94095 1 0.16283 1 0.47958 1 0.36918 1 0.75202 1 4.1943e-05 0.033 0.60821 1 0.4276 1 8q loss 79 (8%) 878 0.083024 1 0.10867 1 0.75312 1 0.46099 1 0.25408 1 0.76935 1 1 1 0.43273 1 0.19871 1 0.29113 1 9p loss 285 (30%) 672 0.040883 1 0.42161 1 0.0012671 0.972 0.00010842 0.085 0.016349 1 0.04807 1 0.17392 1 6.6764e-06 0.00529 0.087715 1 0.69383 1 9q loss 258 (27%) 699 0.22499 1 0.70652 1 0.10826 1 0.0012322 0.946 0.050567 1 0.57068 1 0.14444 1 0.00059596 0.462 0.078557 1 0.92287 1 10p loss 153 (16%) 804 0.0054752 1 0.87385 1 0.043813 1 0.014536 1 0.10706 1 0.0081038 1 0.37885 1 0.19649 1 1 1 0.2434 1 10q loss 203 (21%) 754 0.012077 1 0.78122 1 0.11318 1 0.01359 1 0.10657 1 0.030977 1 0.69785 1 0.0511 1 0.93108 1 0.16283 1 11p loss 244 (25%) 713 0.078741 1 0.78318 1 0.016939 1 0.033928 1 0.015302 1 0.59561 1 1 1 0.014078 1 0.51482 1 0.14702 1 11q loss 331 (35%) 626 0.48135 1 0.63434 1 0.19353 1 0.19551 1 0.015166 1 0.73288 1 0.103 1 0.51965 1 0.70919 1 0.534 1 12p loss 137 (14%) 820 0.32293 1 0.74322 1 0.18911 1 0.034256 1 0.6339 1 0.087707 1 1 1 0.017462 1 0.26496 1 0.22561 1 12q loss 116 (12%) 841 0.67087 1 0.040712 1 0.35875 1 0.020465 1 0.87219 1 0.44037 1 0.61951 1 0.0091493 1 0.10233 1 0.63791 1 13q loss 390 (41%) 567 0.029713 1 0.5291 1 0.71242 1 0.1124 1 0.75589 1 0.96111 1 0.53956 1 0.00055121 0.428 0.42807 1 0.15698 1 14q loss 229 (24%) 728 0.053337 1 0.66888 1 0.85367 1 0.079389 1 0.078003 1 0.87326 1 0.46622 1 0.00036553 0.285 0.21222 1 0.52922 1 15q loss 280 (29%) 677 0.050185 1 0.65233 1 0.49403 1 0.017615 1 0.073579 1 0.3897 1 1 1 0.0030519 1 0.035168 1 0.65732 1 16p loss 145 (15%) 812 0.73594 1 0.65675 1 0.29 1 0.95497 1 0.069914 1 0.55427 1 0.65373 1 0.30642 1 0.55263 1 0.86256 1 16q loss 527 (55%) 430 0.043641 1 0.00099476 0.767 0.70217 1 0.68944 1 0.36658 1 0.20694 1 0.35817 1 4.453e-11 3.56e-08 0.13424 1 0.2906 1 17p loss 514 (54%) 443 0.31193 1 0.017387 1 0.093085 1 0.0064679 1 0.72043 1 0.84353 1 0.52693 1 0.022616 1 1 1 0.95884 1 17q loss 242 (25%) 715 0.88295 1 0.12487 1 0.88593 1 0.55726 1 0.30423 1 0.35744 1 0.073624 1 0.00070001 0.542 0.87066 1 0.88112 1 18p loss 286 (30%) 671 8.2424e-06 0.00651 0.012987 1 0.039669 1 0.014637 1 0.3772 1 0.83745 1 0.73177 1 0.031089 1 0.93822 1 0.1523 1 18q loss 284 (30%) 673 0.0049106 1 0.021053 1 0.021196 1 0.020556 1 0.117 1 0.67995 1 0.73183 1 0.019838 1 0.39341 1 0.21963 1 19p loss 169 (18%) 788 0.17503 1 0.038348 1 0.91845 1 0.57119 1 0.48948 1 0.27373 1 1 1 7.1009e-06 0.00562 0.45653 1 0.28353 1 19q loss 144 (15%) 813 0.43786 1 0.71339 1 0.69654 1 0.47234 1 0.23739 1 0.38283 1 1 1 5.1229e-05 0.0403 0.091571 1 0.37034 1 20p loss 84 (9%) 873 0.1652 1 0.20429 1 0.4675 1 0.1163 1 0.63462 1 0.40668 1 0.60277 1 0.0328 1 0.31539 1 0.45453 1 20q loss 48 (5%) 909 0.19187 1 0.11737 1 0.10646 1 0.035863 1 1 1 0.33081 1 1 1 0.024946 1 0.33416 1 0.62333 1 21q loss 160 (17%) 797 0.75445 1 0.44201 1 0.029678 1 0.46638 1 0.023391 1 0.35435 1 0.38448 1 0.095745 1 0.34274 1 0.65891 1 22q loss 424 (44%) 533 0.13496 1 0.63792 1 0.83405 1 0.52671 1 0.37749 1 0.66969 1 0.35215 1 0.0057491 1 0.0016435 1 0.23038 1 xq loss 160 (17%) 797 0.5307 1 0.11078 1 0.39064 1 0.042612 1 0.76357 1 0.14022 1 0.2255 1 0.10949 1 0.70428 1 0.088859 1