		Clinical Features	Time to Death		AGE		PATHOLOGY.T.STAGE		PATHOLOGY.N.STAGE		PATHOLOGY.M.STAGE		HISTOLOGICAL.TYPE		RADIATIONS.RADIATION.REGIMENINDICATION		NUMBERPACKYEARSSMOKED		NUMBER.OF.LYMPH.NODES	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q
1p gain	23 (29%)	55	0.2024	1	0.79307	1	0.59567	1	1	1	1	1	0.51648	1	0.74465	1	0.49674	1	0.70207	1
1q gain	34 (44%)	44	0.15481	1	0.65202	1	0.1325	1	1	1	0.90262	1	0.47512	1	0.22127	1	0.84843	1	0.42374	1
2p gain	11 (14%)	67	0.31157	1	0.15038	1	0.45369	1	0.43664	1	0.78186	1	0.83496	1	0.38028	1	NA	NA	0.41991	1
2q gain	6 (8%)	72	0.25437	1	0.26892	1	0.65171	1	0.15514	1	1	1	0.96362	1	1	1	NA	NA	0.25012	1
3p gain	12 (15%)	66	0.3125	1	0.89218	1	0.73574	1	0.28583	1	0.80935	1	0.10809	1	1	1	NA	NA	0.22397	1
3q gain	46 (59%)	32	0.47965	1	0.85842	1	0.79931	1	0.19104	1	0.27081	1	0.0080879	1	0.21906	1	0.75135	1	0.08923	1
4p gain	3 (4%)	75	NA	NA	0.17725	1	NA	NA	0.3	1	NA	NA	0.96663	1	1	1	NA	NA	NA	NA
5p gain	24 (31%)	54	0.70118	1	0.70746	1	0.57992	1	1	1	0.72038	1	0.17763	1	0.74372	1	0.68147	1	0.57656	1
5q gain	9 (12%)	69	0.24	1	0.60866	1	1	1	1	1	0.56676	1	0.76336	1	1	1	0.52919	1	0.72727	1
6p gain	15 (19%)	63	0.88752	1	0.36159	1	1	1	0.74095	1	0.70812	1	0.27158	1	0.70676	1	0.85952	1	0.016843	1
6q gain	6 (8%)	72	0.91621	1	0.59834	1	1	1	0.66065	1	0.17108	1	0.88108	1	1	1	NA	NA	0.11799	1
7p gain	7 (9%)	71	0.17354	1	0.43076	1	0.31856	1	0.63237	1	0.71554	1	0.97181	1	0.33004	1	NA	NA	0.2999	1
7q gain	8 (10%)	70	0.58244	1	0.30696	1	1	1	1	1	0.7563	1	0.80505	1	0.023201	1	NA	NA	0.56826	1
8p gain	13 (17%)	65	0.25755	1	0.24208	1	1	1	1	1	1	1	0.8781	1	0.4459	1	0.59255	1	0.89472	1
8q gain	22 (28%)	56	0.63967	1	0.14476	1	1	1	1	1	0.89832	1	0.78062	1	0.74867	1	0.38992	1	0.90862	1
9p gain	8 (10%)	70	0.50102	1	0.55859	1	0.25719	1	0.68893	1	1	1	0.97255	1	1	1	NA	NA	0.72727	1
9q gain	10 (13%)	68	0.49514	1	0.86342	1	0.45369	1	1	1	1	1	0.95987	1	1	1	NA	NA	0.72727	1
10p gain	5 (6%)	73	0.59587	1	0.34658	1	0.1697	1	0.15514	1	1	1	0.91411	1	0.58309	1	NA	NA	0.25286	1
11p gain	3 (4%)	75	NA	NA	0.082312	1	NA	NA	0.51304	1	NA	NA	0.75437	1	1	1	NA	NA	NA	NA
12p gain	10 (13%)	68	0.92814	1	0.081952	1	0.27257	1	1	1	0.61412	1	0.95987	1	0.35687	1	0.32212	1	0.70265	1
12q gain	10 (13%)	68	0.93993	1	0.12296	1	0.71629	1	1	1	1	1	0.72003	1	0.35687	1	NA	NA	0.70265	1
13q gain	3 (4%)	75	0.86481	1	0.86631	1	1	1	1	1	0.58615	1	0.75437	1	1	1	NA	NA	NA	NA
14q gain	9 (12%)	69	0.75773	1	0.85735	1	0.6725	1	0.42099	1	1	1	0.76336	1	1	1	NA	NA	0.87037	1
15q gain	10 (13%)	68	0.039461	1	0.67061	1	0.10044	1	0.68893	1	0.76369	1	0.72003	1	0.66974	1	0.12818	1	0.28393	1
16p gain	9 (12%)	69	0.61504	1	0.69189	1	0.13343	1	0.43664	1	1	1	0.96836	1	0.64019	1	NA	NA	0.41991	1
16q gain	8 (10%)	70	0.65099	1	0.53453	1	0.10044	1	0.68893	1	0.76369	1	0.97255	1	0.614	1	NA	NA	0.64453	1
17p gain	4 (5%)	74	0.19526	1	0.97166	1	0.092958	1	0.077604	1	1	1	0.88531	1	0.12727	1	NA	NA	0.35502	1
17q gain	8 (10%)	70	0.5099	1	0.14265	1	0.0010446	0.635	0.2292	1	0.76369	1	0.97255	1	0.614	1	NA	NA	0.53513	1
18p gain	6 (8%)	72	0.35955	1	0.04425	1	0.07785	1	1	1	1	1	0.88108	1	0.26036	1	NA	NA	0.46702	1
18q gain	4 (5%)	74	0.60579	1	0.18222	1	0.092958	1	0.57803	1	1	1	0.94287	1	0.12727	1	NA	NA	0.88166	1
19p gain	10 (13%)	68	0.68755	1	0.33708	1	0.71629	1	0.15355	1	1	1	0.95987	1	0.0094332	1	NA	NA	0.56538	1
19q gain	17 (22%)	61	0.014967	1	0.39505	1	1	1	0.35644	1	0.61106	1	0.78121	1	6.0814e-05	0.0375	0.9354	1	0.28326	1
20p gain	21 (27%)	57	0.14535	1	0.79609	1	0.56194	1	0.14318	1	0.23027	1	0.45036	1	0.73953	1	0.47767	1	0.3211	1
20q gain	26 (33%)	52	0.57243	1	0.40074	1	0.28875	1	0.57496	1	0.64471	1	0.35693	1	0.75055	1	0.65376	1	0.96452	1
21q gain	9 (12%)	69	0.052533	1	0.080508	1	0.6725	1	0.42099	1	1	1	0.76336	1	0.16713	1	NA	NA	0.46702	1
22q gain	10 (13%)	68	0.33676	1	0.038503	1	0.13343	1	0.43664	1	0.78186	1	0.95987	1	0.66974	1	NA	NA	0.48867	1
xq gain	7 (9%)	71	0.9949	1	0.68233	1	0.41778	1	1	1	0.7563	1	0.97181	1	0.33004	1	NA	NA	0.56826	1
1p loss	3 (4%)	75	NA	NA	0.79687	1	NA	NA	0.51304	1	NA	NA	0.96663	1	0.070403	1	NA	NA	NA	NA
1q loss	3 (4%)	75	0.1826	1	0.58691	1	0.54648	1	0.21228	1	1	1	0.96663	1	0.0037594	1	NA	NA	0.45391	1
2p loss	4 (5%)	74	0.38384	1	0.77261	1	1	1	0.30868	1	1	1	0.0646	1	0.52536	1	NA	NA	0.00027089	0.166
2q loss	9 (12%)	69	0.89407	1	0.37161	1	1	1	1	1	1	1	0.37643	1	0.16713	1	NA	NA	0.52629	1
3p loss	19 (24%)	59	0.40356	1	0.42508	1	0.55413	1	0.013817	1	0.86779	1	0.33467	1	0.072552	1	0.74769	1	0.26049	1
4p loss	31 (40%)	47	0.6186	1	0.207	1	0.79842	1	0.29167	1	0.66468	1	0.052836	1	0.11961	1	0.97231	1	0.35244	1
4q loss	14 (18%)	64	0.041459	1	0.30725	1	0.32418	1	0.049422	1	1	1	0.54086	1	0.049925	1	0.78422	1	0.1311	1
5p loss	3 (4%)	75	0.00089154	0.543	0.40853	1	0.54648	1	0.024297	1	1	1	0.96663	1	0.070403	1	NA	NA	0.13105	1
5q loss	15 (19%)	63	0.022739	1	0.12311	1	0.52514	1	0.7455	1	0.56098	1	0.49688	1	0.2615	1	0.7592	1	0.66573	1
6p loss	7 (9%)	71	0.87052	1	0.087776	1	1	1	0.061699	1	1	1	0.97181	1	0.59356	1	0.23778	1	0.36304	1
6q loss	14 (18%)	64	0.24454	1	0.15486	1	1	1	0.48946	1	0.32092	1	0.55363	1	0.44306	1	0.049132	1	0.56819	1
7p loss	6 (8%)	72	0.5131	1	0.88646	1	1	1	0.35524	1	0.71554	1	0.88108	1	0.0061225	1	0.90169	1	0.32009	1
7q loss	10 (13%)	68	3.8745e-05	0.0239	0.23133	1	0.25719	1	0.047098	1	0.15365	1	0.95987	1	0.0094332	1	0.72225	1	0.050494	1
8p loss	22 (28%)	56	0.24613	1	0.83337	1	0.56194	1	1	1	0.88116	1	0.12122	1	1	1	0.10375	1	0.72972	1
8q loss	5 (6%)	73	0.9851	1	0.18293	1	0.58811	1	0.30868	1	0.36543	1	0.91411	1	1	1	NA	NA	0.00027396	0.167
9p loss	15 (19%)	63	0.045927	1	0.9664	1	0.52943	1	1	1	1	1	0.43848	1	1	1	0.736	1	0.62976	1
9q loss	10 (13%)	68	0.39078	1	0.23967	1	0.48536	1	0.71402	1	0.80402	1	0.031106	1	0.66974	1	NA	NA	0.7718	1
10p loss	14 (18%)	64	0.086885	1	0.34681	1	0.31207	1	0.074571	1	0.42036	1	0.88666	1	0.23453	1	0.95283	1	0.14443	1
10q loss	17 (22%)	61	0.026479	1	0.39517	1	0.53739	1	0.0089245	1	0.24814	1	0.87865	1	0.14252	1	0.44216	1	0.030297	1
11p loss	23 (29%)	55	0.91069	1	0.73778	1	0.28875	1	0.57496	1	1	1	0.11345	1	0.74465	1	0.32769	1	0.17923	1
11q loss	32 (41%)	46	0.9232	1	0.053044	1	0.31092	1	0.78932	1	0.81208	1	0.33025	1	1	1	0.4793	1	0.60083	1
12p loss	12 (15%)	66	0.36672	1	0.21801	1	0.48536	1	0.71201	1	0.80402	1	0.92998	1	0.20008	1	0.60433	1	0.7718	1
13q loss	20 (26%)	58	0.069864	1	0.72024	1	0.56194	1	0.14318	1	0.88116	1	0.29874	1	1	1	0.71506	1	0.28137	1
14q loss	5 (6%)	73	0.71249	1	0.65553	1	0.65171	1	1	1	0.69297	1	0.91411	1	0.58309	1	NA	NA	0.00027089	0.166
15q loss	7 (9%)	71	0.71711	1	0.43609	1	1	1	0.66595	1	1	1	0.27642	1	1	1	NA	NA	0.92981	1
16p loss	6 (8%)	72	0.93569	1	0.2297	1	0.1697	1	0.3127	1	0.26369	1	0.012521	1	0.58194	1	NA	NA	0.00027089	0.166
16q loss	9 (12%)	69	0.65244	1	0.10415	1	0.42226	1	0.09487	1	0.76369	1	0.0012176	0.739	0.34242	1	NA	NA	0.00026118	0.161
17p loss	20 (26%)	58	0.235	1	0.73998	1	0.77104	1	1	1	0.24939	1	0.29874	1	1	1	0.50616	1	0.60638	1
17q loss	5 (6%)	73	0.41168	1	0.78812	1	0.2989	1	1	1	0.36543	1	0.91411	1	1	1	NA	NA	0.24839	1
18p loss	12 (15%)	66	0.34037	1	0.030595	1	0.092692	1	0.48521	1	1	1	0.57	1	0.10734	1	0.02847	1	0.65205	1
18q loss	18 (23%)	60	0.88612	1	0.37759	1	0.23946	1	0.12134	1	0.74907	1	0.21362	1	0.48319	1	0.2818	1	0.28356	1
19p loss	13 (17%)	65	0.3004	1	0.09671	1	0.70903	1	0.26115	1	0.80402	1	0.58557	1	0.4459	1	NA	NA	0.1996	1
19q loss	4 (5%)	74	0.28229	1	0.91943	1	0.54648	1	0.54885	1	1	1	0.94287	1	0.52536	1	NA	NA	0.00027396	0.167
20p loss	7 (9%)	71	0.82597	1	0.82243	1	0.65691	1	1	1	1	1	0.54659	1	0.59356	1	0.18731	1	0.46702	1
20q loss	3 (4%)	75	NA	NA	0.025899	1	NA	NA	0.51304	1	NA	NA	0.75437	1	1	1	NA	NA	NA	NA
21q loss	10 (13%)	68	0.3605	1	0.27385	1	0.71629	1	1	1	1	1	0.72003	1	0.66974	1	NA	NA	0.53992	1
22q loss	11 (14%)	67	0.57312	1	0.23557	1	0.70903	1	0.71402	1	0.80402	1	0.071521	1	0.38028	1	NA	NA	0.52629	1
xq loss	15 (19%)	63	0.005102	1	0.69908	1	0.52943	1	0.51069	1	0.82473	1	0.8524	1	0.2615	1	0.41051	1	0.32719	1
