Clinical Features	MRNA_CNMF		MRNA_CHIERARCHICAL		MIR_CNMF		MIR_CHIERARCHICAL		CN_CNMF		METHLYATION_CNMF		RPPA_CNMF		RPPA_CHIERARCHICAL		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL	
	nMutated (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
EGFR	74 (26%)	209	0.0071883	0.669	0.03167	1	0.51126	1	0.23271	1	1.0692e-07	1.24e-05	0.0011805	0.122	7.773e-05	0.00839	1.6891e-06	0.000193	0.042471	1	0.34736	1
PIK3R1	32 (11%)	251	0.73976	1	0.70816	1	0.2	1	0.13442	1	0.020684	1	0.43581	1	0.97409	1	0.253	1	0.40561	1	0.60246	1
BRAF	6 (2%)	277	0.76786	1	0.35249	1	0.3177	1	0.022364	1	0.51108	1	NA	NA	1	1	0.078076	1	0.79121	1	1	1
IDH1	14 (5%)	269	9.8281e-05	0.0105	1.0059e-06	0.000116	2.5199e-05	0.00277	2.6114e-06	0.000295	1.237e-05	0.00137	0.0018066	0.179	0.0035226	0.335	0.020325	1	0.00071234	0.0741	0.0026329	0.253
TP53	79 (28%)	204	0.00069562	0.073	0.00048841	0.0518	0.0014975	0.151	0.0021622	0.212	3.0695e-06	0.000344	6.8652e-05	0.00748	0.039173	1	0.0091914	0.836	0.0017905	0.179	0.036152	1
PTEN	87 (31%)	196	0.11554	1	0.43068	1	0.027254	1	0.25982	1	0.58753	1	0.87993	1	0.37121	1	0.38426	1	0.27405	1	0.19496	1
PIK3CA	30 (11%)	253	0.71141	1	0.61973	1	0.48914	1	0.94769	1	0.54918	1	0.16367	1	0.7545	1	0.28553	1	0.26203	1	0.83762	1
RB1	24 (8%)	259	0.036509	1	0.011732	1	0.13483	1	0.79198	1	0.022171	1	0.16725	1	0.4926	1	0.69117	1	0.081778	1	0.075359	1
NF1	29 (10%)	254	0.086046	1	0.057436	1	0.027048	1	0.8475	1	0.0078138	0.719	0.0013633	0.139	0.22672	1	0.1248	1	0.56596	1	0.91494	1
STAG2	12 (4%)	271	0.39164	1	0.13238	1	0.71699	1	0.24003	1	1	1	0.73108	1	0.0069359	0.652	0.18373	1	0.47875	1	0.77076	1
WNT2	5 (2%)	278	0.15125	1	0.0023459	0.228	0.43128	1	0.13354	1	1	1	NA	NA	0.041607	1	0.42317	1	NA	NA	NA	NA
TPTE2	8 (3%)	275	0.46042	1	1	1	0.46787	1	0.82199	1	0.26648	1	0.24114	1	0.62449	1	0.4088	1	0.37597	1	0.74053	1