Clinical Features	CN_CNMF		METHLYATION_CNMF		RPPA_CNMF		RPPA_CHIERARCHICAL		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL		MIRSEQ_MATURE_CNMF		MIRSEQ_MATURE_CHIERARCHICAL	
	nCNV (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q
1p	103 (23%)	349	1.0334e-08	3.88e-06	1.1518e-07	4.14e-05	0.15592	1	0.85067	1	0.062669	1	0.19198	1	0.082738	1	0.64901	1	0.42024	1	0.015442	1
1q	134 (30%)	318	4.9005e-08	1.79e-05	4.8809e-08	1.79e-05	0.22166	1	0.94266	1	0.014944	1	0.01456	1	0.026801	1	0.652	1	0.054453	1	0.0036565	1
2p	109 (24%)	343	2.127e-08	7.89e-06	8.9488e-09	3.37e-06	0.1903	1	0.55022	1	0.37971	1	0.22114	1	0.61199	1	0.22336	1	0.73674	1	0.013841	1
2q	102 (23%)	350	0.00028162	0.0912	8.4701e-05	0.028	0.36011	1	0.89647	1	0.15282	1	0.044839	1	0.47906	1	0.095022	1	0.5701	1	0.059518	1
3p	330 (73%)	122	2.6123e-32	1.04e-29	4.0939e-15	1.62e-12	0.49015	1	0.17063	1	0.043634	1	0.052744	1	0.0010188	0.326	0.049748	1	0.039975	1	0.0024739	0.779
3q	275 (61%)	177	3.5051e-08	1.29e-05	1.242e-06	0.00043	0.20293	1	0.58468	1	0.0010903	0.348	0.0017417	0.55	0.00033135	0.107	0.072522	1	0.048376	1	0.088964	1
4p	199 (44%)	253	6.7124e-18	2.66e-15	7.474e-15	2.94e-12	0.22501	1	0.61212	1	0.020185	1	0.00032034	0.103	0.1496	1	0.40491	1	0.057993	1	4.4961e-06	0.00154
4q	161 (36%)	291	1.9325e-11	7.46e-09	4.255e-09	1.62e-06	0.58555	1	0.41592	1	0.085189	1	0.020128	1	0.033006	1	0.65825	1	0.23649	1	0.00035671	0.115
5p	207 (46%)	245	1.1219e-14	4.41e-12	1.4024e-09	5.36e-07	0.85725	1	0.46586	1	0.065207	1	0.27838	1	0.36308	1	0.8691	1	0.087252	1	0.82387	1
5q	197 (44%)	255	2.2494e-19	8.97e-17	1.4179e-15	5.61e-13	0.43394	1	0.07953	1	0.14863	1	0.0030305	0.946	0.3093	1	0.43109	1	0.2004	1	0.21805	1
6p	126 (28%)	326	4.4576e-07	0.000156	4.3114e-05	0.0144	0.28401	1	0.45257	1	0.4753	1	0.24929	1	0.75773	1	0.24592	1	0.67383	1	0.026992	1
6q	110 (24%)	342	0.0001093	0.0358	0.023397	1	0.52908	1	1	1	0.15512	1	0.56289	1	0.61308	1	0.24598	1	0.93255	1	0.8652	1
7p	186 (41%)	266	1.2669e-11	4.9e-09	1.6326e-08	6.07e-06	0.1298	1	0.83138	1	0.62273	1	0.85176	1	0.20432	1	0.13282	1	0.63591	1	0.083849	1
7q	150 (33%)	302	2.7581e-07	9.76e-05	1.3766e-07	4.93e-05	0.043153	1	0.92452	1	0.53986	1	0.21449	1	0.13166	1	0.51015	1	0.24838	1	0.022337	1
8p	295 (65%)	157	5.3162e-08	1.94e-05	0.0025416	0.796	0.93519	1	0.66371	1	0.73551	1	0.31733	1	0.64409	1	0.058329	1	0.70119	1	0.042871	1
8q	297 (66%)	155	8.9071e-05	0.0293	0.00018968	0.0618	0.070447	1	0.57527	1	0.11293	1	0.087033	1	0.18978	1	0.019088	1	0.44325	1	0.023128	1
9p	241 (53%)	211	4.0791e-18	1.62e-15	5.7302e-09	2.17e-06	0.5688	1	0.88126	1	0.6359	1	0.71859	1	0.46439	1	0.23621	1	0.89955	1	0.051534	1
9q	190 (42%)	262	1.1971e-12	4.69e-10	0.0025258	0.793	0.30525	1	0.20844	1	0.57904	1	0.24628	1	0.90786	1	0.35228	1	0.4138	1	0.10249	1
10p	168 (37%)	284	8.3495e-08	3.01e-05	3.0066e-05	0.0101	0.27833	1	0.29592	1	0.71503	1	0.1279	1	0.16299	1	0.15773	1	0.22593	1	0.025055	1
10q	123 (27%)	329	4.513e-07	0.000158	6.0628e-05	0.0201	0.050054	1	0.12314	1	0.14541	1	0.0061578	1	0.45098	1	0.53051	1	0.089515	1	0.056374	1
11p	172 (38%)	280	7.3065e-08	2.64e-05	8.8926e-05	0.0293	0.52945	1	0.81413	1	0.10083	1	0.57923	1	0.14423	1	0.96382	1	0.29347	1	0.47849	1
11q	199 (44%)	253	7.8941e-07	0.000276	1.7794e-05	0.00605	0.33442	1	0.64409	1	0.11625	1	0.59756	1	0.62343	1	0.86315	1	0.32581	1	0.75279	1
12p	154 (34%)	298	1.1075e-08	4.13e-06	5.5346e-06	0.00189	0.020971	1	0.20692	1	0.0093447	1	0.0051973	1	0.15846	1	0.49146	1	0.061992	1	0.03791	1
12q	101 (22%)	351	4.0186e-06	0.00138	4.6555e-05	0.0155	0.074366	1	0.085447	1	0.14163	1	0.050464	1	0.36165	1	0.82569	1	0.2293	1	0.34089	1
13q	196 (43%)	256	8.8492e-11	3.41e-08	2.6176e-09	9.97e-07	0.28997	1	0.5736	1	0.047528	1	0.0040491	1	0.19618	1	0.32523	1	0.20632	1	0.047721	1
14q	175 (39%)	277	1.9657e-07	7e-05	5.4916e-05	0.0183	0.58495	1	0.944	1	0.62144	1	0.42409	1	0.36022	1	0.0069135	1	0.63613	1	0.012337	1
15q	149 (33%)	303	1.0795e-09	4.13e-07	0.0012678	0.402	0.36219	1	0.39729	1	0.15787	1	0.69539	1	0.7169	1	0.54807	1	0.87382	1	0.38284	1
16p	146 (32%)	306	4.4545e-09	1.69e-06	9.0092e-07	0.000314	0.4796	1	0.82686	1	0.83167	1	0.2876	1	0.75209	1	0.12582	1	0.60639	1	0.086876	1
16q	162 (36%)	290	2.7186e-05	0.00919	1.0794e-06	0.000375	0.32622	1	0.2415	1	0.013547	1	0.0012007	0.382	0.10645	1	0.6606	1	0.0040873	1	0.0585	1
17p	155 (34%)	297	1.4307e-12	5.59e-10	6.9486e-08	2.52e-05	0.46428	1	0.052028	1	0.0067427	1	0.0048836	1	0.051127	1	0.15537	1	0.055778	1	0.30764	1
17q	106 (23%)	346	3.5771e-08	1.32e-05	0.00011914	0.039	0.58938	1	0.046278	1	0.14912	1	0.14677	1	0.33405	1	0.43011	1	0.31102	1	0.17413	1
18p	193 (43%)	259	1.1976e-11	4.65e-09	4.3972e-08	1.61e-05	0.80065	1	0.33084	1	0.11887	1	0.019965	1	0.22073	1	0.88155	1	0.017991	1	0.018905	1
18q	228 (50%)	224	2.3891e-12	9.32e-10	1.0607e-08	3.97e-06	0.75066	1	0.11744	1	0.056786	1	0.003495	1	0.16367	1	0.024104	1	0.46279	1	0.04507	1
19p	127 (28%)	325	0.00020056	0.0652	3.9064e-05	0.0131	0.28324	1	0.71152	1	0.040303	1	0.30977	1	0.86242	1	0.59592	1	0.29504	1	0.33686	1
19q	134 (30%)	318	1.888e-05	0.0064	1.9702e-07	7e-05	0.1385	1	0.3744	1	0.079757	1	0.17485	1	0.035844	1	0.96531	1	0.5928	1	0.10667	1
20p	209 (46%)	243	1.0255e-07	3.69e-05	1.6211e-07	5.79e-05	0.57188	1	0.026758	1	0.034287	1	0.23595	1	0.32866	1	0.091126	1	0.7567	1	0.079581	1
20q	203 (45%)	249	3.6736e-07	0.000129	1.9251e-06	0.000664	0.91698	1	0.40735	1	0.028104	1	0.19068	1	0.34053	1	0.046784	1	0.61676	1	0.26	1
21q	191 (42%)	261	7.7429e-12	3.01e-09	9.1856e-09	3.45e-06	0.93096	1	0.72795	1	0.3678	1	0.4503	1	0.77386	1	0.53384	1	0.74477	1	0.052037	1
22q	162 (36%)	290	2.2154e-06	0.000762	3.4571e-07	0.000122	0.38792	1	0.8757	1	0.64814	1	0.40786	1	0.73919	1	0.23367	1	0.28917	1	0.0065539	1
xq	143 (32%)	309	2.5781e-08	9.54e-06	6.3869e-10	2.45e-07	0.17531	1	0.043389	1	0.13802	1	0.033084	1	0.0041694	1	0.91504	1	0.37478	1	0.0086293	1