		Clinical Features	Time to Death		AGE		NEOPLASM.DISEASESTAGE		PATHOLOGY.T.STAGE		PATHOLOGY.N.STAGE		PATHOLOGY.M.STAGE		GENDER		KARNOFSKY.PERFORMANCE.SCORE		NUMBERPACKYEARSSMOKED		YEAROFTOBACCOSMOKINGONSET	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q
3p gain	8 (12%)	58	0.0067187	1	0.075586	1	0.015818	1	0.46474	1	0.032692	1	0.2543	1	0.12762	1	NA	NA	NA	NA	NA	NA
3q gain	8 (12%)	58	0.0067187	1	0.075586	1	0.015818	1	0.46474	1	0.032692	1	0.2543	1	0.12762	1	NA	NA	NA	NA	NA	NA
4p gain	24 (36%)	42	0.6737	1	0.20414	1	0.14066	1	0.80888	1	1	1	0.11243	1	1	1	0.8631	1	0.035238	1	0.008403	1
4q gain	24 (36%)	42	0.6737	1	0.20414	1	0.14066	1	0.80888	1	1	1	0.11243	1	1	1	0.8631	1	0.035238	1	0.008403	1
5p gain	8 (12%)	58	0.0017412	0.857	0.062698	1	0.0015211	0.751	0.36408	1	0.087416	1	0.0080338	1	0.45546	1	NA	NA	NA	NA	NA	NA
5q gain	8 (12%)	58	0.0017412	0.857	0.062698	1	0.0015211	0.751	0.36408	1	0.087416	1	0.0080338	1	0.45546	1	NA	NA	NA	NA	NA	NA
7p gain	24 (36%)	42	0.066274	1	0.16212	1	0.36084	1	0.69086	1	0.6361	1	0.11243	1	0.19497	1	0.8631	1	0.77582	1	0.034133	1
7q gain	24 (36%)	42	0.066274	1	0.16212	1	0.36084	1	0.69086	1	0.6361	1	0.11243	1	0.19497	1	0.8631	1	0.77582	1	0.034133	1
8p gain	17 (26%)	49	0.95851	1	0.15075	1	0.38932	1	0.40812	1	1	1	0.66373	1	0.77561	1	0.8631	1	0.51645	1	NA	NA
8q gain	18 (27%)	48	0.95851	1	0.1605	1	0.22833	1	0.44672	1	1	1	0.12345	1	0.57661	1	0.8631	1	0.51645	1	NA	NA
9p gain	10 (15%)	56	0.51111	1	0.8931	1	0.12168	1	0.19419	1	0.30573	1	1	1	1	1	NA	NA	0.70848	1	NA	NA
9q gain	10 (15%)	56	0.51111	1	0.8931	1	0.12168	1	0.19419	1	0.30573	1	1	1	1	1	NA	NA	0.70848	1	NA	NA
10p gain	4 (6%)	62	0.64065	1	0.28557	1	0.26889	1	0.45367	1	NA	NA	NA	NA	1	1	NA	NA	NA	NA	NA	NA
11p gain	15 (23%)	51	0.81993	1	0.67622	1	0.74138	1	0.81124	1	0.61737	1	0.38408	1	1	1	NA	NA	0.035238	1	0.008403	1
11q gain	15 (23%)	51	0.57293	1	0.94464	1	0.74138	1	0.81124	1	1	1	0.38408	1	1	1	NA	NA	0.035238	1	0.008403	1
12p gain	19 (29%)	47	0.9262	1	0.010013	1	0.076821	1	0.31692	1	1	1	0.13536	1	0.41203	1	0.8631	1	0.57625	1	NA	NA
12q gain	20 (30%)	46	0.43671	1	0.050582	1	0.11117	1	0.70886	1	0.33007	1	0.13536	1	0.59328	1	0.8631	1	0.29119	1	0.008403	1
14q gain	21 (32%)	45	0.62211	1	0.11246	1	0.096857	1	0.38069	1	1	1	0.1552	1	0.79421	1	0.8631	1	0.29119	1	0.008403	1
15q gain	21 (32%)	45	0.20596	1	0.34918	1	0.41159	1	0.47949	1	0.35044	1	0.1552	1	0.79421	1	0.8631	1	0.55485	1	0.16097	1
16p gain	21 (32%)	45	0.29602	1	0.95673	1	0.47578	1	0.4033	1	0.63533	1	0.72397	1	1	1	0.8631	1	0.035238	1	0.008403	1
16q gain	21 (32%)	45	0.29602	1	0.95673	1	0.47578	1	0.4033	1	0.63533	1	0.72397	1	1	1	0.8631	1	0.035238	1	0.008403	1
18p gain	17 (26%)	49	0.96755	1	0.29885	1	0.29074	1	0.43345	1	0.30335	1	0.50549	1	0.77561	1	NA	NA	0.44858	1	NA	NA
18q gain	16 (24%)	50	0.44027	1	0.55989	1	0.30983	1	0.20024	1	0.30335	1	0.50549	1	1	1	NA	NA	0.44858	1	NA	NA
19p gain	19 (29%)	47	0.0075443	1	0.022593	1	0.015652	1	0.52078	1	0.0024579	1	0.082441	1	0.41203	1	NA	NA	0.77582	1	0.034133	1
19q gain	17 (26%)	49	0.055663	1	0.010359	1	0.29543	1	0.64363	1	0.13589	1	0.061726	1	0.77561	1	NA	NA	0.55485	1	0.16097	1
20p gain	20 (30%)	46	0.60235	1	0.13503	1	0.36794	1	0.79309	1	0.35044	1	0.70805	1	0.59328	1	0.8631	1	0.29119	1	0.008403	1
20q gain	21 (32%)	45	0.19911	1	0.053643	1	0.1371	1	0.84554	1	0.35044	1	0.70805	1	0.433	1	0.8631	1	0.29119	1	0.008403	1
21q gain	4 (6%)	62	0.56088	1	0.56504	1	1	1	1	1	NA	NA	NA	NA	1	1	NA	NA	NA	NA	NA	NA
22q gain	19 (29%)	47	0.092885	1	0.44924	1	0.4925	1	0.52078	1	0.16558	1	0.35577	1	0.41203	1	NA	NA	0.77582	1	0.034133	1
xq gain	6 (9%)	60	0.42518	1	0.74608	1	0.38054	1	0.66094	1	1	1	0.19173	1	0.38804	1	NA	NA	NA	NA	NA	NA
1p loss	53 (80%)	13	0.31652	1	0.42617	1	0.028505	1	0.04106	1	1	1	0.0060648	1	0.53446	1	0.37414	1	0.55609	1	NA	NA
1q loss	52 (79%)	14	0.96097	1	0.4137	1	0.006155	1	0.013275	1	0.52875	1	0.02032	1	0.36732	1	0.37414	1	NA	NA	NA	NA
2p loss	46 (70%)	20	0.47367	1	0.27727	1	0.14379	1	0.11372	1	1	1	0.19416	1	0.28399	1	0.37414	1	NA	NA	NA	NA
2q loss	46 (70%)	20	0.47367	1	0.27727	1	0.14379	1	0.11372	1	1	1	0.19416	1	0.28399	1	0.37414	1	NA	NA	NA	NA
3p loss	9 (14%)	57	0.2429	1	0.050048	1	0.076126	1	0.022785	1	1	1	0.65837	1	0.46918	1	NA	NA	NA	NA	NA	NA
3q loss	8 (12%)	58	0.2842	1	0.11083	1	0.14097	1	0.052767	1	1	1	0.63854	1	0.25608	1	NA	NA	NA	NA	NA	NA
5p loss	10 (15%)	56	0.85438	1	0.83051	1	0.13336	1	0.084258	1	1	1	1	1	1	1	NA	NA	0.11712	1	0.04957	1
5q loss	10 (15%)	56	0.85438	1	0.83051	1	0.13336	1	0.084258	1	1	1	1	1	1	1	NA	NA	0.11712	1	0.04957	1
6p loss	51 (77%)	15	0.18397	1	0.3831	1	0.082282	1	0.055688	1	0.56754	1	0.16985	1	0.24419	1	0.37414	1	NA	NA	NA	NA
6q loss	51 (77%)	15	0.18397	1	0.3831	1	0.082282	1	0.055688	1	0.56754	1	0.16985	1	0.24419	1	0.37414	1	NA	NA	NA	NA
8p loss	9 (14%)	57	0.24932	1	0.86478	1	0.74098	1	0.43892	1	1	1	1	1	0.72701	1	NA	NA	NA	NA	NA	NA
8q loss	8 (12%)	58	0.29157	1	0.75252	1	0.701	1	0.41201	1	1	1	1	1	1	1	NA	NA	NA	NA	NA	NA
9p loss	10 (15%)	56	0.023812	1	0.0099787	1	1	1	1	1	0.52875	1	0.48756	1	0.5083	1	NA	NA	NA	NA	NA	NA
9q loss	10 (15%)	56	0.023812	1	0.0099787	1	1	1	1	1	0.52875	1	0.48756	1	0.5083	1	NA	NA	NA	NA	NA	NA
10p loss	48 (73%)	18	0.17109	1	0.75794	1	0.54394	1	0.39355	1	1	1	0.01944	1	1	1	0.10664	1	0.24907	1	NA	NA
10q loss	49 (74%)	17	0.17751	1	0.9281	1	0.34658	1	0.21025	1	1	1	0.01944	1	1	1	0.10664	1	0.24907	1	NA	NA
11p loss	7 (11%)	59	0.3657	1	0.026768	1	0.096572	1	0.079019	1	0.46143	1	1	1	0.69108	1	NA	NA	NA	NA	NA	NA
11q loss	7 (11%)	59	0.3657	1	0.026768	1	0.096572	1	0.079019	1	0.46143	1	1	1	0.69108	1	NA	NA	NA	NA	NA	NA
13q loss	43 (65%)	23	0.26615	1	0.070501	1	0.44685	1	0.35686	1	0.30071	1	0.53435	1	0.2941	1	0.8099	1	0.29278	1	0.36186	1
16p loss	4 (6%)	62	6.417e-09	3.2e-06	0.50332	1	0.00040931	0.203	0.0067224	1	3.3558e-05	0.0167	NA	NA	0.63912	1	NA	NA	NA	NA	NA	NA
16q loss	5 (8%)	61	4.2226e-09	2.11e-06	0.21772	1	0.0043946	1	0.048289	1	0.00016452	0.0816	NA	NA	0.64106	1	NA	NA	NA	NA	NA	NA
17p loss	50 (76%)	16	0.67312	1	0.14636	1	0.074015	1	0.041855	1	0.56754	1	0.16985	1	0.15789	1	0.37414	1	NA	NA	NA	NA
17q loss	50 (76%)	16	0.67312	1	0.14636	1	0.074015	1	0.041855	1	0.56754	1	0.16985	1	0.15789	1	0.37414	1	NA	NA	NA	NA
18p loss	8 (12%)	58	0.92784	1	0.4995	1	0.44439	1	0.89881	1	0.21076	1	0.65837	1	0.25608	1	NA	NA	NA	NA	NA	NA
18q loss	10 (15%)	56	0.35248	1	0.34203	1	0.13742	1	0.83471	1	0.25752	1	0.65837	1	0.29506	1	NA	NA	NA	NA	NA	NA
19q loss	3 (5%)	63	0.10574	1	0.3004	1	0.01191	1	0.19143	1	0.028894	1	NA	NA	1	1	NA	NA	NA	NA	NA	NA
20p loss	4 (6%)	62	0.52437	1	0.18774	1	0.13795	1	0.14225	1	0.30374	1	1	1	1	1	NA	NA	NA	NA	NA	NA
20q loss	3 (5%)	63	0.37751	1	0.44845	1	0.039991	1	0.024913	1	0.30374	1	1	1	1	1	NA	NA	NA	NA	NA	NA
21q loss	35 (53%)	31	0.067431	1	0.48526	1	0.90577	1	0.7812	1	0.07309	1	0.078669	1	0.80476	1	0.27781	1	0.4349	1	0.10126	1
22q loss	8 (12%)	58	0.23042	1	0.79971	1	0.17783	1	1	1	0.21076	1	0.32244	1	0.055318	1	NA	NA	NA	NA	NA	NA
xq loss	39 (59%)	27	0.51439	1	0.11291	1	0.30293	1	0.36222	1	1	1	0.14666	1	0.13624	1	0.079055	1	0.2418	1	0.27686	1
