Clinical Features Time to Death AGE GENDER KARNOFSKY.PERFORMANCE.SCORE HISTOLOGICAL.TYPE RADIATIONS.RADIATION.REGIMENINDICATION nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q 1p gain 9 (3%) 267 0.0019984 0.803 0.045384 1 0.30955 1 0.017834 1 0.0098604 1 1 1 1q gain 14 (5%) 262 0.43031 1 0.00070395 0.289 0.17873 1 0.24132 1 0.32542 1 0.77443 1 2p gain 6 (2%) 270 0.57543 1 0.13497 1 1 1 0.40641 1 0.6709 1 1 1 2q gain 5 (2%) 271 0.89741 1 0.28661 1 0.6641 1 0.40641 1 0.52493 1 0.65882 1 3p gain 7 (3%) 269 0.0060356 1 0.10189 1 0.25363 1 0.77336 1 0.18288 1 0.68462 1 3q gain 7 (3%) 269 8.7089e-05 0.0363 0.096812 1 0.70677 1 0.305 1 0.071824 1 0.68462 1 4p gain 6 (2%) 270 0.31988 1 0.97364 1 0.22263 1 0.85375 1 0.15587 1 0.66764 1 6p gain 5 (2%) 271 0.73626 1 0.33168 1 0.18385 1 0.017839 1 0.52493 1 1 1 7p gain 68 (25%) 208 0.0042525 1 0.00012668 0.0527 0.20843 1 0.47343 1 0.24895 1 0.55231 1 7q gain 85 (31%) 191 0.0018557 0.748 1.6351e-06 0.000688 0.15014 1 0.22731 1 0.20529 1 0.67719 1 8p gain 24 (9%) 252 0.41842 1 0.99533 1 0.090806 1 0.54563 1 0.30532 1 0.82252 1 8q gain 31 (11%) 245 0.42355 1 0.2487 1 0.1266 1 0.16292 1 0.031667 1 1 1 9p gain 10 (4%) 266 0.0061979 1 0.022983 1 0.19474 1 0.86593 1 0.78119 1 1 1 9q gain 12 (4%) 264 0.0016035 0.651 0.034537 1 0.014275 1 0.70846 1 0.33866 1 0.75693 1 10p gain 30 (11%) 246 0.90235 1 0.025696 1 0.031847 1 0.0046552 1 0.040992 1 0.0036223 1 10q gain 4 (1%) 272 0.74013 1 0.10401 1 0.12705 1 NA NA 0.2343 1 0.10009 1 11p gain 19 (7%) 257 0.69167 1 0.048837 1 0.34291 1 0.73883 1 0.49763 1 1 1 11q gain 32 (12%) 244 0.77983 1 0.024018 1 0.25896 1 0.92186 1 0.57164 1 1 1 12p gain 23 (8%) 253 0.5483 1 0.82462 1 0.13122 1 0.35825 1 1 1 0.64344 1 12q gain 10 (4%) 266 0.01987 1 0.4348 1 0.35069 1 NA NA 0.92006 1 0.50856 1 14q gain 3 (1%) 273 0.49085 1 0.37053 1 1 1 NA NA 1 1 0.24404 1 15q gain 4 (1%) 272 0.34653 1 0.073626 1 0.62708 1 0.38566 1 0.68652 1 0.59652 1 16p gain 10 (4%) 266 0.28438 1 0.10948 1 1 1 0.61677 1 0.15646 1 0.73167 1 16q gain 11 (4%) 265 0.1351 1 0.28433 1 0.75925 1 0.38566 1 0.085008 1 0.34054 1 17p gain 8 (3%) 268 0.063939 1 0.11918 1 0.29456 1 0.91469 1 0.16092 1 0.7155 1 17q gain 9 (3%) 267 0.070448 1 0.24996 1 0.51339 1 0.76348 1 0.52831 1 1 1 18p gain 9 (3%) 267 0.063701 1 0.87798 1 1 1 0.14315 1 0.29568 1 0.72293 1 18q gain 7 (3%) 269 0.12885 1 0.56778 1 1 1 0.22362 1 0.88909 1 0.43473 1 19p gain 49 (18%) 227 0.26002 1 0.0021259 0.852 0.87598 1 0.60765 1 0.0073165 1 0.86703 1 19q gain 14 (5%) 262 0.00057423 0.236 0.0017704 0.717 0.58412 1 0.741 1 0.15795 1 0.77443 1 20p gain 24 (9%) 252 1.7827e-07 7.52e-05 3.2738e-05 0.0137 0.52105 1 0.8907 1 0.58784 1 0.82252 1 20q gain 25 (9%) 251 1.2292e-07 5.2e-05 0.00031685 0.131 0.14816 1 0.67817 1 0.72171 1 0.8229 1 21q gain 14 (5%) 262 0.35494 1 0.090286 1 0.7893 1 0.39063 1 0.20607 1 0.77443 1 22q gain 7 (3%) 269 0.25131 1 0.2317 1 0.70677 1 0.77336 1 0.060962 1 0.68462 1 xq gain 23 (8%) 253 0.51807 1 0.40147 1 0.078748 1 0.53585 1 0.30572 1 0.48859 1 1p loss 94 (34%) 182 0.076632 1 0.010208 1 0.52496 1 0.66783 1 1.6704e-22 7.15e-20 0.057009 1 1q loss 15 (5%) 261 0.86716 1 0.058982 1 0.6025 1 0.09211 1 0.029867 1 0.57266 1 2p loss 11 (4%) 265 0.16968 1 0.55338 1 0.23378 1 0.56444 1 0.50011 1 1 1 2q loss 10 (4%) 266 0.85143 1 0.043574 1 0.35069 1 0.81589 1 0.17247 1 1 1 3p loss 13 (5%) 263 0.029809 1 0.38492 1 0.77701 1 0.071833 1 0.51708 1 1 1 3q loss 17 (6%) 259 0.045442 1 0.80631 1 0.21031 1 0.59912 1 0.73645 1 0.79233 1 4p loss 43 (16%) 233 0.82888 1 0.0039754 1 0.6189 1 0.4 1 0.016532 1 0.72375 1 4q loss 54 (20%) 222 0.71149 1 0.11495 1 0.44743 1 0.62633 1 0.0095839 1 0.62825 1 5p loss 26 (9%) 250 0.46775 1 0.087469 1 0.83672 1 0.225 1 0.014996 1 0.12522 1 5q loss 23 (8%) 253 0.11275 1 0.45919 1 0.66305 1 0.7506 1 0.17923 1 0.10626 1 6p loss 18 (7%) 258 7.1591e-05 0.0299 0.4677 1 1 1 0.38425 1 0.097851 1 0.79794 1 6q loss 35 (13%) 241 0.0005466 0.225 0.086379 1 0.58682 1 0.14682 1 0.0012125 0.495 0.17614 1 8p loss 10 (4%) 266 0.040016 1 0.28751 1 0.75743 1 0.44739 1 0.15646 1 0.73167 1 8q loss 7 (3%) 269 0.0071791 1 0.4539 1 0.70677 1 0.39063 1 0.43001 1 1 1 9p loss 63 (23%) 213 0.00044884 0.185 0.038892 1 0.19513 1 0.37006 1 0.14928 1 0.046603 1 9q loss 25 (9%) 251 0.0071684 1 0.11087 1 0.67467 1 0.077534 1 0.74671 1 1 1 10p loss 44 (16%) 232 4.4964e-13 1.92e-10 1.9167e-10 8.15e-08 0.069666 1 0.076335 1 0.0012495 0.509 0.48638 1 10q loss 52 (19%) 224 3.2166e-06 0.00135 3.1054e-09 1.32e-06 0.031516 1 0.22234 1 0.0018144 0.733 0.6236 1 11p loss 38 (14%) 238 0.28464 1 0.16572 1 0.38732 1 0.81238 1 0.16577 1 0.85208 1 11q loss 13 (5%) 263 0.00020996 0.0871 0.39041 1 0.58235 1 0.12742 1 0.15739 1 0.23477 1 12p loss 13 (5%) 263 0.67318 1 0.37244 1 0.58235 1 0.25112 1 0.21112 1 0.76194 1 12q loss 26 (9%) 250 0.56574 1 0.59961 1 0.6847 1 0.59912 1 0.052701 1 0.51128 1 13q loss 68 (25%) 208 0.2721 1 0.60667 1 0.40149 1 0.83702 1 0.1327 1 0.037638 1 14q loss 39 (14%) 237 0.0030081 1 0.0081335 1 0.3035 1 0.14291 1 0.3882 1 0.71189 1 15q loss 22 (8%) 254 0.31314 1 0.54451 1 0.38044 1 0.73235 1 0.9596 1 0.64249 1 16p loss 8 (3%) 268 0.20766 1 0.0092159 1 0.72966 1 0.19432 1 1 1 1 1 16q loss 14 (5%) 262 0.072744 1 0.0044585 1 0.7893 1 0.81589 1 0.73623 1 0.77443 1 17p loss 12 (4%) 264 0.00077416 0.317 0.053822 1 0.39493 1 0.024689 1 0.65345 1 0.34842 1 17q loss 8 (3%) 268 0.036929 1 0.17697 1 1 1 0.15756 1 0.4935 1 1 1 18p loss 36 (13%) 240 0.74867 1 0.22082 1 0.050069 1 0.48405 1 0.50065 1 1 1 18q loss 34 (12%) 242 0.49118 1 0.22709 1 0.20198 1 0.68024 1 0.24423 1 1 1 19p loss 15 (5%) 261 0.91271 1 0.22245 1 0.42629 1 0.50101 1 0.84448 1 0.25824 1 19q loss 110 (40%) 166 0.24626 1 0.09092 1 0.90233 1 0.69912 1 8.9045e-19 3.8e-16 0.18832 1 20p loss 3 (1%) 273 0.53057 1 0.51977 1 0.596 1 NA NA 1 1 1 1 21q loss 20 (7%) 256 0.70098 1 0.50252 1 0.24536 1 0.076541 1 0.053441 1 0.32108 1 22q loss 31 (11%) 245 0.022529 1 0.0090235 1 0.18197 1 0.033189 1 0.19195 1 0.83889 1 xq loss 35 (13%) 241 0.14 1 0.40425 1 0.72024 1 0.60702 1 0.24072 1 0.84701 1