Clinical Features Time to Death AGE NEOPLASM.DISEASESTAGE PATHOLOGY.T.STAGE PATHOLOGY.N.STAGE PATHOLOGY.M.STAGE GENDER HISTOLOGICAL.TYPE NUMBERPACKYEARSSMOKED YEAROFTOBACCOSMOKINGONSET COMPLETENESS.OF.RESECTION NUMBER.OF.LYMPH.NODES nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q 1p gain 3 (5%) 54 NA NA 0.81958 1 0.9414 1 1 1 0.56794 1 0.61012 1 0.58681 1 1 1 NA NA NA NA 1 1 0.89116 1 1q gain 12 (21%) 45 0.70541 1 0.8265 1 0.67949 1 0.32499 1 1 1 0.21083 1 0.11689 1 0.65883 1 0.18398 1 0.1402 1 1 1 0.97262 1 2p gain 6 (11%) 51 0.64187 1 0.36824 1 0.62266 1 1 1 0.62863 1 0.065723 1 0.39614 1 1 1 0.26068 1 0.28128 1 0.48351 1 0.58579 1 2q gain 7 (12%) 50 0.30037 1 0.56289 1 0.70233 1 1 1 1 1 0.054798 1 0.22753 1 1 1 0.26068 1 0.28128 1 0.36607 1 0.91878 1 3p gain 3 (5%) 54 8.4969e-05 0.0537 0.028084 1 0.89451 1 1 1 1 1 1 1 0.58681 1 1 1 NA NA NA NA 1 1 0.9035 1 3q gain 7 (12%) 50 0.10156 1 0.43596 1 0.45301 1 0.5621 1 0.34585 1 0.32146 1 0.69057 1 1 1 NA NA NA NA 0.55592 1 0.38521 1 4p gain 3 (5%) 54 NA NA 0.84919 1 0.11656 1 1 1 1 1 0.019173 1 0.24248 1 1 1 NA NA NA NA 1 1 0.21791 1 4q gain 3 (5%) 54 NA NA 0.84919 1 0.11656 1 1 1 1 1 0.019173 1 0.24248 1 1 1 NA NA NA NA 1 1 0.21791 1 5p gain 5 (9%) 52 0.68095 1 0.055879 1 0.94669 1 1 1 1 1 0.7003 1 0.6511 1 0.38503 1 NA NA NA NA 0.29388 1 0.24627 1 5q gain 3 (5%) 54 NA NA 5.2496e-05 0.0332 0.89451 1 1 1 1 1 1 1 0.58681 1 1 1 NA NA NA NA 0.60297 1 0.43777 1 7p gain 13 (23%) 44 0.9211 1 0.94112 1 0.68477 1 0.31915 1 1 1 0.23447 1 0.21985 1 1 1 NA NA NA NA 0.0039596 1 0.90847 1 7q gain 12 (21%) 45 0.79982 1 0.84163 1 0.64732 1 0.32499 1 0.70978 1 0.21083 1 0.34903 1 1 1 NA NA NA NA 0.010191 1 0.64252 1 8p gain 8 (14%) 49 0.0014482 0.909 0.57292 1 0.26886 1 0.57961 1 0.39124 1 1 1 1 1 1 1 NA NA NA NA 0.55592 1 0.52245 1 8q gain 15 (26%) 42 0.46937 1 0.62911 1 0.67695 1 1 1 0.48585 1 0.56005 1 0.23582 1 1 1 NA NA NA NA 0.29985 1 0.88992 1 9q gain 3 (5%) 54 0.026213 1 0.8809 1 0.11805 1 1 1 0.14617 1 0.33342 1 0.088859 1 1 1 NA NA NA NA 0.60297 1 0.72539 1 11p gain 6 (11%) 51 0.67131 1 0.77932 1 0.62266 1 1 1 0.62863 1 0.50722 1 0.39614 1 1 1 NA NA NA NA 0.11622 1 0.49597 1 11q gain 6 (11%) 51 0.45804 1 0.15665 1 0.62266 1 1 1 0.62863 1 0.50722 1 0.39614 1 1 1 NA NA NA NA 0.48351 1 0.35342 1 12p gain 6 (11%) 51 0.17384 1 0.22342 1 0.65269 1 0.50371 1 1 1 0.37959 1 0.082828 1 0.083579 1 NA NA NA NA 0.13972 1 0.65061 1 12q gain 5 (9%) 52 0.034255 1 0.36554 1 0.82962 1 1 1 0.31915 1 0.29298 1 0.16697 1 0.057923 1 NA NA NA NA 0.061167 1 0.37048 1 13q gain 4 (7%) 53 0.30226 1 0.98655 1 0.89156 1 1 1 0.56261 1 1 1 0.61741 1 0.31961 1 NA NA NA NA 0.34683 1 0.79911 1 14q gain 7 (12%) 50 0.96792 1 0.4592 1 0.43922 1 1 1 0.66868 1 0.25264 1 1 1 1 1 NA NA NA NA 0.36607 1 0.93048 1 15q gain 4 (7%) 53 0.016764 1 0.12073 1 0.89156 1 1 1 0.56261 1 1 1 1 1 1 1 NA NA NA NA 1 1 0.21809 1 16p gain 6 (11%) 51 0.79677 1 0.27403 1 0.30723 1 0.50371 1 0.15115 1 0.14098 1 0.082828 1 0.44532 1 NA NA NA NA 0.02659 1 0.083595 1 16q gain 7 (12%) 50 0.94882 1 0.2312 1 0.45301 1 0.5621 1 0.34585 1 0.12306 1 0.22753 1 0.50079 1 NA NA NA NA 0.062945 1 0.22944 1 17q gain 3 (5%) 54 8.4969e-05 0.0537 0.83539 1 0.89451 1 1 1 1 1 0.33342 1 0.58681 1 1 1 NA NA NA NA NA NA 0.77148 1 18p gain 6 (11%) 51 0.67398 1 0.33882 1 0.51217 1 1 1 0.62863 1 0.25855 1 0.39614 1 0.44532 1 NA NA NA NA 0.13972 1 0.025807 1 19p gain 3 (5%) 54 0.89697 1 0.54916 1 0.9414 1 1 1 0.56794 1 0.33342 1 0.58681 1 1 1 NA NA NA NA NA NA 0.09578 1 19q gain 6 (11%) 51 0.58973 1 0.79195 1 0.40654 1 1 1 1 1 1 1 0.39614 1 1 1 0.041748 1 0.45543 1 1 1 0.44562 1 20p gain 10 (18%) 47 0.34181 1 0.048309 1 0.85536 1 1 1 1 1 1 1 0.1602 1 0.64115 1 NA NA NA NA 0.10578 1 0.771 1 20q gain 11 (19%) 46 0.34181 1 0.028862 1 0.83338 1 1 1 0.71393 1 0.83474 1 0.089088 1 1 1 NA NA NA NA 0.21435 1 0.30843 1 22q gain 3 (5%) 54 9.3592e-05 0.059 0.89465 1 0.89451 1 1 1 1 1 1 1 1 1 1 1 NA NA NA NA NA NA 0.74355 1 1p loss 7 (12%) 50 0.35858 1 0.103 1 0.91342 1 1 1 0.66868 1 0.40029 1 0.69057 1 1 1 0.3933 1 0.057013 1 0.55592 1 0.31442 1 2p loss 6 (11%) 51 0.43398 1 0.66331 1 0.93646 1 1 1 1 1 1 1 1 1 0.44532 1 NA NA NA NA 0.13972 1 0.50411 1 3p loss 11 (19%) 46 0.61961 1 0.55376 1 0.82056 1 1 1 1 1 0.56303 1 0.015518 1 1 1 0.26068 1 NA NA 0.14917 1 0.22748 1 3q loss 5 (9%) 52 0.56377 1 0.43423 1 0.49297 1 1 1 0.58737 1 0.49051 1 0.01571 1 1 1 NA NA NA NA 0.48351 1 0.27769 1 4p loss 6 (11%) 51 0.17132 1 0.065988 1 0.93646 1 1 1 1 1 1 1 0.082828 1 1 1 NA NA NA NA 0.36607 1 0.48385 1 4q loss 5 (9%) 52 0.95204 1 0.0095344 1 0.94669 1 1 1 1 1 0.7003 1 0.01571 1 1 1 NA NA NA NA 0.11622 1 0.83158 1 5q loss 5 (9%) 52 0.90044 1 0.39965 1 0.82962 1 1 1 0.31915 1 0.7003 1 0.6511 1 0.38503 1 NA NA NA NA 0.097882 1 0.3995 1 6p loss 20 (35%) 37 0.18192 1 0.63576 1 0.56793 1 0.4101 1 0.53001 1 0.085527 1 0.16378 1 0.73719 1 0.97313 1 0.3621 1 0.39023 1 0.8248 1 6q loss 23 (40%) 34 0.64918 1 0.4923 1 0.35687 1 0.38463 1 0.53243 1 0.018377 1 0.79367 1 0.78287 1 0.96855 1 0.52786 1 0.55277 1 0.73041 1 8p loss 8 (14%) 49 0.70848 1 0.50065 1 0.43092 1 1 1 1 1 0.35172 1 0.44798 1 0.50079 1 NA NA NA NA 0.158 1 0.59026 1 9p loss 22 (39%) 35 0.17311 1 0.95072 1 0.17067 1 0.38894 1 0.055612 1 0.32414 1 1 1 1 1 0.32395 1 0.10185 1 0.15463 1 0.066744 1 9q loss 12 (21%) 45 0.39503 1 0.59559 1 0.63613 1 1 1 0.25787 1 0.70818 1 1 1 1 1 NA NA NA NA 0.7004 1 0.15544 1 10p loss 10 (18%) 47 0.15858 1 0.23618 1 0.27466 1 0.28139 1 0.69442 1 0.27825 1 0.48628 1 0.64115 1 0.62371 1 0.43851 1 0.39465 1 0.97234 1 10q loss 10 (18%) 47 0.29532 1 0.20911 1 0.85536 1 1 1 1 1 0.27825 1 0.48628 1 0.64115 1 0.16013 1 NA NA 0.39465 1 0.31979 1 11p loss 5 (9%) 52 0.6462 1 0.52697 1 0.94669 1 1 1 1 1 0.11087 1 0.6511 1 1 1 NA NA NA NA 1 1 0.59581 1 11q loss 4 (7%) 53 0.51885 1 0.76879 1 0.93983 1 1 1 1 1 0.68232 1 0.32155 1 0.31961 1 NA NA NA NA 0.15896 1 0.33824 1 12p loss 6 (11%) 51 0.45804 1 0.79584 1 0.22058 1 1 1 0.15115 1 0.025134 1 0.39614 1 1 1 NA NA NA NA 0.062945 1 0.12098 1 12q loss 7 (12%) 50 0.27408 1 0.49611 1 0.45301 1 0.5621 1 0.34585 1 0.021704 1 0.69057 1 1 1 0.26068 1 NA NA 0.17642 1 0.10191 1 13q loss 9 (16%) 48 0.92171 1 0.34278 1 0.43916 1 0.57532 1 0.42739 1 0.18852 1 0.2748 1 0.26222 1 0.3933 1 0.68095 1 0.10578 1 0.27724 1 15q loss 8 (14%) 49 0.82922 1 0.64222 1 0.35018 1 1 1 0.39124 1 0.082661 1 0.12422 1 0.50079 1 NA NA NA NA 0.55592 1 0.10914 1 17p loss 20 (35%) 37 0.29338 1 0.36817 1 0.17298 1 0.080941 1 0.74934 1 0.19907 1 0.7814 1 0.73719 1 0.16832 1 0.11119 1 0.00082545 0.519 0.62339 1 17q loss 9 (16%) 48 0.80971 1 0.73448 1 0.67908 1 0.57532 1 1 1 0.31496 1 0.2748 1 0.14421 1 NA NA NA NA 0.042733 1 0.13274 1 18p loss 21 (37%) 36 0.91235 1 0.072034 1 0.26362 1 0.65912 1 0.75103 1 1 1 0.78908 1 0.76971 1 0.25791 1 0.86323 1 0.30056 1 0.83907 1 18q loss 30 (53%) 27 0.42396 1 0.67773 1 0.27272 1 1 1 1 1 0.32944 1 0.43109 1 0.79854 1 0.58206 1 0.20571 1 0.030032 1 0.51168 1 19p loss 6 (11%) 51 0.99284 1 0.91036 1 0.40654 1 1 1 1 1 0.25855 1 0.67794 1 1 1 NA NA NA NA 0.73951 1 0.44963 1 19q loss 5 (9%) 52 0.99284 1 0.93367 1 0.34243 1 1 1 1 1 0.16536 1 1 1 1 1 NA NA NA NA 0.48351 1 0.48366 1 20p loss 4 (7%) 53 9.2159e-09 5.84e-06 0.81277 1 0.89156 1 0.36736 1 0.56261 1 0.39351 1 1 1 0.31961 1 NA NA NA NA 0.029388 1 0.9608 1 21q loss 19 (33%) 38 0.30254 1 0.23426 1 0.09985 1 0.16409 1 0.10891 1 0.053956 1 0.40666 1 1 1 0.65111 1 0.53684 1 0.037428 1 0.10019 1 22q loss 9 (16%) 48 0.41589 1 0.77271 1 0.55314 1 0.57532 1 0.67405 1 0.18852 1 0.0079715 1 0.55173 1 NA NA NA NA 0.051804 1 0.53843 1 xq loss 3 (5%) 54 0.3125 1 0.38272 1 0.9414 1 1 1 0.56794 1 0.33342 1 1 1 1 1 NA NA NA NA 1 1 0.5944 1