name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-F2-6879-01A-11D-2154-08	59	51	8	36	1.355932e-01	1	exome+100bp flanks	34834024	12	33	3.444908e-07	9.473496e-07
TCGA-F2-6880-01A-11D-2154-08	11	10	1	9	9.090909e-02	0	coding only	34834024	1	8	2.870756e-08	2.296605e-07
TCGA-F2-7273-01A-11D-2154-08	55	49	6	48	1.090909e-01	1	exome+100bp flanks	34834024	1	43	2.870756e-08	1.234425e-06
TCGA-F2-7276-01A-11D-2154-08	51	42	9	41	1.764706e-01	1	exome+100bp flanks	34834024	1	38	2.870756e-08	1.090887e-06
TCGA-F2-A44G-01A-11D-A26I-08	61	56	5	45	8.196721e-02	1	exome+100bp flanks	34834024	10	42	2.870756e-07	1.205718e-06
TCGA-F2-A44H-01A-11D-A26I-08	42	39	3	33	7.142857e-02	0	coding only	34834024	6	28	1.722454e-07	8.038118e-07
TCGA-FB-A4P5-01A-11D-A26I-08	9	8	1	4	1.111111e-01	0	coding only	34834024	4	3	1.148303e-07	8.612269e-08
TCGA-FB-A4P6-01A-12D-A26I-08	28	26	2	24	7.142857e-02	0	coding only	34834024	1	21	2.870756e-08	6.028589e-07
TCGA-FB-A545-01A-11D-A26I-08	51	47	4	44	7.843137e-02	0	coding only	34834024	3	42	8.612269e-08	1.205718e-06
TCGA-FZ-5919-01A-11D-1609-08	80	76	4	57	5.000000e-02	0	coding only	34834024	18	53	5.167362e-07	1.521501e-06
TCGA-FZ-5920-01A-11D-1609-08	89	82	7	63	7.865169e-02	1	exome+100bp flanks	34834024	18	59	5.167362e-07	1.693746e-06
TCGA-FZ-5921-01A-11D-1609-08	130	125	5	95	3.846154e-02	1	exome+100bp flanks	34834024	29	92	8.325194e-07	2.641096e-06
TCGA-FZ-5922-01A-11D-1609-08	55	51	4	41	7.272727e-02	0	coding only	34834024	9	40	2.583681e-07	1.148303e-06
TCGA-FZ-5923-01A-12D-1609-08	135	131	4	103	2.962963e-02	0	coding only	34834024	27	96	7.751042e-07	2.755926e-06
TCGA-FZ-5924-01A-13D-1609-08	61	57	4	40	6.557377e-02	0	coding only	34834024	17	39	4.880286e-07	1.119595e-06
TCGA-FZ-5926-01A-11D-1609-08	81	78	3	60	3.703704e-02	0	coding only	34834024	17	55	4.880286e-07	1.578916e-06
TCGA-H6-A45N-01A-11D-A26I-08	48	42	6	34	1.250000e-01	1	exome+100bp flanks	34834024	6	32	1.722454e-07	9.186421e-07
TCGA-HV-A5A3-01A-11D-A26I-08	89	77	12	66	1.348315e-01	1	exome+100bp flanks	34834024	10	62	2.870756e-07	1.779869e-06
TCGA-HV-A5A4-01A-11D-A26I-08	59	58	1	47	1.694915e-02	0	coding only	34834024	10	43	2.870756e-07	1.234425e-06
TCGA-HV-A5A5-01A-11D-A26I-08	21	19	2	12	9.523810e-02	0	coding only	34834024	7	12	2.009530e-07	3.444908e-07
TCGA-HV-A5A6-01A-11D-A26I-08	64	61	3	46	4.687500e-02	0	coding only	34834024	12	43	3.444908e-07	1.234425e-06
TCGA-HZ-7289-01A-11D-2154-08	96	93	3	68	3.125000e-02	0	coding only	34834024	23	65	6.602740e-07	1.865992e-06
TCGA-HZ-7918-01A-11D-2154-08	176	171	5	132	2.840909e-02	0	coding only	34834024	35	124	1.004765e-06	3.559738e-06
TCGA-HZ-7920-01A-11D-2201-08	129	124	5	118	3.875969e-02	1	exome+100bp flanks	34834024	5	113	1.435378e-07	3.243955e-06
TCGA-HZ-7922-01A-11D-2154-08	60	56	4	44	6.666667e-02	0	coding only	34834024	12	43	3.444908e-07	1.234425e-06
TCGA-HZ-7923-01A-12D-2154-08	14	10	4	9	2.857143e-01	0	coding only	34834024	1	9	2.870756e-08	2.583681e-07
TCGA-HZ-7924-01A-11D-2154-08	78	75	3	75	3.846154e-02	0	coding only	34834024	0	67	0	1.923407e-06
TCGA-HZ-7925-01A-11D-2154-08	72	68	4	55	5.555556e-02	0	coding only	34834024	11	50	3.157832e-07	1.435378e-06
TCGA-HZ-7926-01A-11D-2154-08	113	104	9	86	7.964602e-02	1	exome+100bp flanks	34834024	15	80	4.306135e-07	2.296605e-06
TCGA-HZ-8001-01A-11D-2201-08	198	190	8	172	4.040404e-02	1	exome+100bp flanks	34834024	17	165	4.880286e-07	4.736748e-06
TCGA-HZ-8002-01A-11D-2201-08	200	191	9	185	4.500000e-02	1	exome+100bp flanks	34834024	6	174	1.722454e-07	4.995116e-06
TCGA-HZ-8003-01A-21D-2201-08	344	339	5	312	1.453488e-02	0	coding only	34834024	27	300	7.751042e-07	8.612269e-06
TCGA-HZ-8005-01A-11D-2201-08	251	242	9	219	3.585657e-02	1	exome+100bp flanks	34834024	19	213	5.454437e-07	6.114711e-06
TCGA-HZ-8315-01A-11D-2396-08	71	69	2	50	2.816901e-02	0	coding only	34834024	19	48	5.454437e-07	1.377963e-06
TCGA-HZ-8636-01A-21D-2396-08	58	56	2	44	3.448276e-02	0	coding only	34834024	9	39	2.583681e-07	1.119595e-06
TCGA-HZ-8638-01A-11D-2396-08	8	6	2	5	2.500000e-01	0	coding only	34834024	0	4	0	1.148303e-07
TCGA-HZ-A49G-01A-11D-A26I-08	55	53	2	43	3.636364e-02	0	coding only	34834024	9	39	2.583681e-07	1.119595e-06
TCGA-HZ-A49H-01A-11D-A26I-08	19	17	2	16	1.052632e-01	0	coding only	34834024	1	16	2.870756e-08	4.593210e-07
TCGA-HZ-A4BH-01A-11D-A26I-08	81	77	4	60	4.938272e-02	0	coding only	34834024	17	58	4.880286e-07	1.665039e-06
TCGA-HZ-A4BK-01A-11D-A26I-08	67	65	2	53	2.985075e-02	0	coding only	34834024	12	50	3.444908e-07	1.435378e-06
TCGA-IB-7644-01A-11D-2154-08	40	38	2	28	5.000000e-02	0	coding only	34834024	8	26	2.296605e-07	7.463967e-07
TCGA-IB-7645-01A-22D-2201-08	191	180	11	158	5.759162e-02	1	exome+100bp flanks	34834024	19	149	5.454437e-07	4.277427e-06
TCGA-IB-7646-01A-11D-2154-08	82	79	3	63	3.658537e-02	0	coding only	34834024	15	60	4.306135e-07	1.722454e-06
TCGA-IB-7647-01A-11D-2154-08	75	70	5	55	6.666667e-02	1	exome+100bp flanks	34834024	15	53	4.306135e-07	1.521501e-06
TCGA-IB-7649-01A-11D-2154-08	67	62	5	57	7.462687e-02	1	exome+100bp flanks	34834024	5	53	1.435378e-07	1.521501e-06
TCGA-IB-7651-01A-11D-2154-08	19139	18937	202	14032	1.055437e-02	0	coding only	34834024	4736	13537	1.359590e-04	3.886143e-04
TCGA-IB-7652-01A-11D-2154-08	102	98	4	73	3.921569e-02	0	coding only	34834024	25	72	7.176891e-07	2.066945e-06
TCGA-IB-7654-01A-11D-2154-08	46	45	1	31	2.173913e-02	0	coding only	34834024	14	28	4.019059e-07	8.038118e-07
TCGA-IB-7885-01A-11D-2154-08	45	43	2	29	4.444444e-02	0	coding only	34834024	14	28	4.019059e-07	8.038118e-07
TCGA-IB-7886-01A-11D-2154-08	110	106	4	91	3.636364e-02	0	coding only	34834024	14	86	4.019059e-07	2.468851e-06
TCGA-IB-7887-01A-11D-2154-08	57	56	1	50	1.754386e-02	0	coding only	34834024	6	45	1.722454e-07	1.291840e-06
TCGA-IB-7889-01A-11D-2154-08	110	108	2	91	1.818182e-02	0	coding only	34834024	17	82	4.880286e-07	2.354020e-06
TCGA-IB-7890-01A-12D-2201-08	175	171	4	143	2.285714e-02	0	coding only	34834024	26	140	7.463967e-07	4.019059e-06
TCGA-IB-7891-01A-11D-2201-08	169	159	10	135	5.917160e-02	1	exome+100bp flanks	34834024	21	127	6.028589e-07	3.645861e-06
TCGA-IB-7893-01A-11D-2201-08	269	261	8	237	2.973978e-02	0	coding only	34834024	24	221	6.889816e-07	6.344372e-06
TCGA-IB-7897-01A-21D-2201-08	258	243	15	218	5.813953e-02	1	exome+100bp flanks	34834024	23	206	6.602740e-07	5.913758e-06
TCGA-M8-A5N4-01A-11D-A26I-08	58	54	4	40	6.896552e-02	0	coding only	34834024	12	36	3.444908e-07	1.033472e-06