		Clinical Features	Time to Death		AGE		PATHOLOGY.T.STAGE		PATHOLOGY.N.STAGE		COMPLETENESS.OF.RESECTION		NUMBER.OF.LYMPH.NODES		GLEASON_SCORE_COMBINED		GLEASON_SCORE_PRIMARY		GLEASON_SCORE_SECONDARY		GLEASON_SCORE		PSA_RESULT_PREOP		DAYS_TO_PREOP_PSA		PSA_VALUE		DAYS_TO_PSA	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q
1p gain	5 (3%)	179	100	1	0.95598	1	0.021897	1	0.43189	1	1	1	0.95748	1	0.3268	1	0.16933	1	0.66084	1	0.13524	1	0.072287	1	0.46905	1	0.57176	1	0.86225	1
1q gain	8 (4%)	176	100	1	0.88575	1	0.05906	1	0.59907	1	0.68677	1	0.63646	1	0.21252	1	0.011576	1	0.81603	1	0.099252	1	0.084169	1	0.58077	1	0.73944	1	0.39811	1
3p gain	16 (9%)	168	100	1	0.03111	1	0.0064161	1	0.67824	1	1	1	0.50357	1	0.039643	1	0.042018	1	0.24613	1	0.0077278	1	0.5956	1	0.59123	1	0.26595	1	0.16345	1
3q gain	20 (11%)	164	100	1	0.010203	1	0.0051261	1	0.44698	1	0.69305	1	0.43901	1	0.072818	1	0.018182	1	0.71738	1	0.019399	1	0.19544	1	0.44173	1	0.0047299	1	0.067369	1
4p gain	4 (2%)	180	100	1	0.081275	1	0.66731	1	1	1	0.60675	1	0.00078613	0.594	0.37866	1	0.92993	1	0.15778	1	0.41784	1	0.94706	1	0.48069	1	0.00055018	0.418	0.82095	1
4q gain	3 (2%)	181	100	1	0.24142	1	1	1	1	1	1	1	0.00078698	0.594	0.85805	1	0.71291	1	8.1291e-06	0.00633	0.94973	1	0.93512	1	0.66225	1	0.00088403	0.659	0.15601	1
5p gain	3 (2%)	181	100	1	0.71897	1	0.31293	1	0.28609	1	0.16355	1	0.70321	1	0.24467	1	0.3197	1	8.1291e-06	0.00633	0.049783	1	0.43026	1	0.89686	1	NA	NA	NA	NA
7p gain	33 (18%)	151	100	1	0.17583	1	0.16291	1	0.19454	1	0.10014	1	0.2491	1	0.042467	1	0.13095	1	0.13758	1	0.051106	1	0.097028	1	0.33616	1	0.45318	1	0.41211	1
7q gain	30 (16%)	154	100	1	0.33826	1	0.18306	1	0.74003	1	0.13703	1	0.33801	1	0.064419	1	0.17355	1	0.16809	1	0.072832	1	0.20309	1	0.21253	1	0.59611	1	0.27461	1
8p gain	21 (11%)	163	100	1	0.18824	1	0.19272	1	0.24287	1	0.57518	1	0.98474	1	0.0038764	1	0.05113	1	0.014694	1	0.0031741	1	0.081592	1	0.38348	1	0.32286	1	0.1913	1
8q gain	34 (18%)	150	100	1	0.83922	1	0.26412	1	0.33524	1	0.57621	1	0.6653	1	0.0043116	1	0.0027354	1	0.2745	1	0.0088644	1	0.15825	1	0.10555	1	0.90883	1	0.29793	1
9p gain	7 (4%)	177	100	1	0.21196	1	0.55653	1	0.026479	1	0.65034	1	0.23087	1	0.5965	1	0.63597	1	0.8105	1	0.19598	1	0.18055	1	0.43936	1	0.00017952	0.139	0.77776	1
9q gain	14 (8%)	170	100	1	0.39276	1	0.032364	1	0.0055001	1	0.33378	1	0.14316	1	0.038495	1	0.01107	1	0.47741	1	0.038753	1	0.099952	1	0.26683	1	0.00024855	0.192	0.84697	1
10p gain	6 (3%)	178	100	1	0.6612	1	0.73918	1	1	1	0.078515	1	0.00078526	0.594	0.51508	1	0.53024	1	0.068762	1	0.1726	1	0.84421	1	0.1804	1	0.48784	1	0.05375	1
10q gain	7 (4%)	177	100	1	0.55108	1	0.55653	1	0.4938	1	0.047539	1	0.43787	1	0.5965	1	0.74412	1	0.67223	1	0.211	1	0.54519	1	0.69996	1	0.34935	1	0.23545	1
11p gain	8 (4%)	176	100	1	0.96678	1	0.05906	1	0.20106	1	0.45552	1	0.71849	1	0.10409	1	0.019577	1	0.53355	1	0.067202	1	0.78497	1	0.31251	1	0.00035439	0.271	0.55535	1
11q gain	8 (4%)	176	100	1	0.96678	1	0.05906	1	0.20106	1	0.45552	1	0.71849	1	0.10409	1	0.019577	1	0.53355	1	0.067202	1	0.78497	1	0.31251	1	0.00035439	0.271	0.55535	1
12q gain	3 (2%)	181	100	1	0.18226	1	1	1	0.28609	1	0.54563	1	0.70321	1	0.85805	1	1.7553e-26	1.37e-23	0.29475	1	0.94973	1	0.10269	1	0.17748	1	0.00012466	0.0966	0.32742	1
16p gain	9 (5%)	175	100	1	0.36101	1	0.0039486	1	0.20106	1	0.73223	1	0.71849	1	0.05235	1	0.0099619	1	0.47764	1	0.063036	1	0.69602	1	0.98852	1	0.57384	1	0.68386	1
16q gain	3 (2%)	181	100	1	0.14666	1	0.31293	1	1	1	1	1	NA	NA	0.6041	1	0.11748	1	0.29475	1	0.64136	1	0.11957	1	0.5597	1	NA	NA	NA	NA
17q gain	4 (2%)	180	100	1	0.63053	1	0.2204	1	0.05565	1	0.60675	1	0.31595	1	0.47243	1	0.34121	1	0.87165	1	0.41784	1	0.74894	1	0.59141	1	0.00022545	0.174	0.024012	1
18p gain	7 (4%)	177	100	1	0.3711	1	0.28629	1	0.12234	1	1	1	0.5179	1	0.5965	1	0.83056	1	0.36991	1	0.40211	1	0.91354	1	0.35911	1	0.00020159	0.156	0.79577	1
18q gain	3 (2%)	181	100	1	0.33202	1	0.31293	1	1	1	1	1	0.00078698	0.594	0.6041	1	0.61531	1	0.75131	1	0.64136	1	0.032949	1	0.36823	1	0.00028121	0.215	0.88656	1
19q gain	3 (2%)	181	100	1	0.87637	1	0.041345	1	0.28609	1	0.54563	1	0.70321	1	0.021858	1	0.11748	1	6.7392e-67	5.31e-64	0.022583	1	0.54644	1	0.80021	1	0.98971	1	0.41561	1
20q gain	5 (3%)	179	100	1	0.06175	1	0.021897	1	1	1	0.35502	1	0.00078526	0.594	0.3268	1	1.3691e-26	1.08e-23	0.98977	1	0.13524	1	0.49237	1	0.6197	1	0.00027269	0.209	0.0846	1
21q gain	3 (2%)	181	100	1	0.08127	1	1	1	1	1	1	1	0.00078698	0.594	0.24467	1	1.7553e-26	1.37e-23	0.4971	1	0.25839	1	0.034918	1	0.30769	1	0.00048544	0.369	0.39306	1
1p loss	4 (2%)	180	100	1	0.84284	1	0.66731	1	1	1	1	1	0.00078613	0.594	0.28508	1	0.34121	1	0.40222	1	0.30942	1	0.22629	1	0.25056	1	0.78388	1	0.5053	1
4p loss	4 (2%)	180	100	1	0.88591	1	0.66731	1	0.0037197	1	0.16355	1	0.12213	1	0.0072808	1	1.5519e-26	1.22e-23	0.027669	1	0.0078226	1	0.30164	1	0.72191	1	NA	NA	NA	NA
4q loss	3 (2%)	181	100	1	0.76958	1	1	1	0.28609	1	NA	NA	0.70321	1	0.047134	1	1.7553e-26	1.37e-23	0.11429	1	0.049783	1	0.49616	1	0.2755	1	NA	NA	NA	NA
5p loss	3 (2%)	181	100	1	0.73802	1	0.041345	1	0.029685	1	0.54563	1	0.27985	1	0.24753	1	0.11748	1	0.4971	1	0.25794	1	0.5326	1	0.56924	1	0.54095	1	0.46799	1
5q loss	5 (3%)	179	100	1	0.63036	1	0.099936	1	0.0086812	1	0.35502	1	0.16746	1	0.012854	1	0.016675	1	0.062547	1	0.0047143	1	0.77991	1	0.69437	1	0.73057	1	0.55127	1
6p loss	7 (4%)	177	100	1	0.12207	1	0.16672	1	0.026479	1	0.65034	1	0.17914	1	0.15747	1	1.0585e-26	8.33e-24	0.78511	1	0.043721	1	0.23329	1	0.50496	1	0.36276	1	0.66142	1
6q loss	12 (7%)	172	100	1	0.9067	1	0.33012	1	0.025143	1	1	1	0.12666	1	0.030289	1	0.0061775	1	0.33091	1	0.0089782	1	0.1542	1	0.63892	1	0.41656	1	0.51395	1
8p loss	59 (32%)	125	100	1	0.17002	1	0.02537	1	0.4204	1	0.12227	1	0.13032	1	0.3162	1	0.042528	1	0.0027291	1	0.52125	1	0.19558	1	0.20308	1	0.32889	1	0.092728	1
8q loss	10 (5%)	174	100	1	0.050722	1	0.038644	1	0.073868	1	0.542	1	0.1533	1	0.063534	1	0.12209	1	0.20354	1	0.057659	1	0.36378	1	0.42176	1	0.24661	1	0.91702	1
9p loss	8 (4%)	176	100	1	0.89589	1	0.05906	1	0.039551	1	1	1	0.26594	1	0.059248	1	0.022424	1	0.28195	1	0.048745	1	0.45658	1	0.6685	1	0.00025567	0.197	0.72315	1
9q loss	4 (2%)	180	100	1	0.028603	1	1	1	1	1	1	1	0.00078613	0.594	0.28508	1	0.92993	1	0.085932	1	0.092128	1	0.98736	1	0.23853	1	0.00047509	0.362	0.48959	1
10p loss	13 (7%)	171	100	1	0.86974	1	0.0043966	1	0.033874	1	0.43017	1	0.25615	1	0.02255	1	0.0042086	1	0.3535	1	0.010112	1	0.22507	1	0.58907	1	0.269	1	0.10997	1
10q loss	15 (8%)	169	100	1	0.78847	1	0.089165	1	0.011197	1	0.6162	1	0.19533	1	0.0058666	1	0.023132	1	0.02604	1	0.0016161	1	0.27437	1	0.61914	1	0.030225	1	0.1768	1
12p loss	17 (9%)	167	100	1	0.83185	1	0.4501	1	0.0034358	1	0.53878	1	0.135	1	0.08872	1	0.036563	1	0.58307	1	0.074888	1	0.46321	1	0.35396	1	0.81887	1	0.51884	1
12q loss	7 (4%)	177	100	1	0.19898	1	0.21859	1	0.16068	1	1	1	0.61486	1	0.17015	1	0.17883	1	0.3291	1	0.10901	1	0.87322	1	0.61215	1	0.00027014	0.207	0.67047	1
13q loss	28 (15%)	156	100	1	0.089506	1	0.86257	1	0.02882	1	0.87773	1	0.18941	1	0.020067	1	0.11951	1	0.079058	1	0.0058368	1	0.35491	1	0.94471	1	0.63916	1	0.72267	1
14q loss	9 (5%)	175	100	1	0.34868	1	0.082113	1	0.24268	1	0.45552	1	0.54292	1	0.024874	1	0.0099619	1	0.24026	1	0.030309	1	0.39071	1	0.42967	1	0.15884	1	0.60962	1
15q loss	12 (7%)	172	100	1	0.83541	1	0.012714	1	0.0036224	1	1	1	0.073838	1	0.0080151	1	0.0010161	0.757	0.20885	1	0.0071723	1	0.45747	1	0.44017	1	0.33887	1	0.66895	1
16p loss	14 (8%)	170	100	1	0.98945	1	0.85549	1	0.36396	1	0.26697	1	0.00077793	0.59	0.2538	1	0.38113	1	0.40604	1	0.11389	1	0.39572	1	0.19749	1	0.013718	1	0.23768	1
16q loss	40 (22%)	144	100	1	0.81405	1	0.20362	1	0.12589	1	0.48563	1	0.26018	1	0.0064066	1	0.0051301	1	0.24989	1	0.0025221	1	0.032412	1	0.40249	1	0.70654	1	0.51626	1
17p loss	27 (15%)	157	100	1	0.89067	1	0.087776	1	0.0082079	1	1	1	0.089384	1	0.0032845	1	0.0051328	1	0.14699	1	0.0023676	1	0.10602	1	0.49764	1	0.14215	1	0.72018	1
17q loss	4 (2%)	180	100	1	0.20581	1	0.66731	1	0.3629	1	0.25866	1	0.82053	1	0.12577	1	1.5519e-26	1.22e-23	0.40222	1	0.1376	1	0.5997	1	0.23365	1	0.98198	1	0.95827	1
18p loss	24 (13%)	160	100	1	0.60495	1	0.12222	1	0.072084	1	0.17992	1	0.15115	1	0.0085237	1	0.023849	1	0.044399	1	0.0020767	1	0.19171	1	0.55242	1	0.88799	1	0.21838	1
18q loss	35 (19%)	149	100	1	0.63074	1	0.21128	1	0.023724	1	0.070501	1	0.17095	1	0.0012441	0.926	0.047324	1	0.00069658	0.529	0.00025901	0.199	0.13927	1	0.97865	1	0.38763	1	0.20159	1
19p loss	4 (2%)	180	100	1	0.0029535	1	0.4006	1	1	1	0.60675	1	0.00078613	0.594	0.66667	1	0.92993	1	0.64194	1	0.72449	1	2.7355e-05	0.0213	0.19612	1	0.7354	1	0.15281	1
19q loss	4 (2%)	180	100	1	0.0029535	1	0.4006	1	1	1	0.60675	1	0.00078613	0.594	0.66667	1	0.92993	1	0.64194	1	0.72449	1	2.7355e-05	0.0213	0.19612	1	0.7354	1	0.15281	1
20p loss	7 (4%)	177	100	1	0.53924	1	0.063352	1	0.4938	1	0.65034	1	0.67412	1	0.95752	1	0.031082	1	0.25208	1	0.9474	1	0.23194	1	0.59385	1	0.0048818	1	0.41663	1
20q loss	4 (2%)	180	100	1	0.36193	1	0.14205	1	1	1	0.25866	1	0.00078613	0.594	0.66667	1	1.5519e-26	1.22e-23	0.59159	1	0.72449	1	0.33031	1	0.55633	1	0.018336	1	0.52786	1
21q loss	8 (4%)	176	100	1	0.67038	1	0.12083	1	0.0025139	1	1	1	0.10038	1	0.11351	1	0.079114	1	0.29989	1	0.13299	1	0.14253	1	0.3941	1	0.79339	1	0.89271	1
22q loss	16 (9%)	168	100	1	0.91108	1	0.056179	1	0.011197	1	0.50933	1	0.1868	1	0.0023648	1	0.00042702	0.326	0.15586	1	0.00351	1	0.76464	1	0.20234	1	0.54293	1	0.77494	1
xq loss	10 (5%)	174	100	1	0.85921	1	0.27587	1	0.073868	1	1	1	0.23265	1	0.029265	1	0.0045013	1	0.4251	1	0.026692	1	0.38552	1	0.13528	1	0.91507	1	0.54222	1
