Clinical Features Time to Death AGE NEOPLASM.DISEASESTAGE PATHOLOGY.T.STAGE PATHOLOGY.N.STAGE PATHOLOGY.M.STAGE GENDER HISTOLOGICAL.TYPE RADIATIONS.RADIATION.REGIMENINDICATION COMPLETENESS.OF.RESECTION NUMBER.OF.LYMPH.NODES nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q 1p gain 12 (7%) 150 0.011834 1 0.80113 1 0.29494 1 0.02913 1 0.40326 1 0.11825 1 0.77241 1 0.050747 1 1 1 0.2007 1 0.50675 1 1q gain 32 (20%) 130 0.96385 1 0.37436 1 0.57979 1 0.0024983 1 0.38354 1 0.38721 1 0.42884 1 0.27715 1 0.33845 1 0.5145 1 0.11631 1 2p gain 39 (24%) 123 0.50146 1 0.34743 1 0.5642 1 0.37783 1 0.28999 1 0.45578 1 0.027218 1 0.039214 1 0.63138 1 0.19997 1 0.74508 1 2q gain 41 (25%) 121 0.98754 1 0.39062 1 0.41618 1 0.25821 1 0.20235 1 0.5675 1 0.029398 1 0.021281 1 0.17061 1 0.32674 1 0.71062 1 3p gain 27 (17%) 135 0.55015 1 0.86889 1 0.16509 1 0.76548 1 0.37659 1 0.042778 1 0.52958 1 0.46895 1 0.26192 1 0.86607 1 0.69946 1 3q gain 34 (21%) 128 0.91381 1 0.93177 1 0.27051 1 0.6549 1 0.47012 1 0.054788 1 0.43887 1 0.30044 1 0.60651 1 0.55654 1 0.97945 1 4p gain 9 (6%) 153 0.74259 1 0.7563 1 0.3169 1 0.65835 1 0.24342 1 0.34471 1 0.18236 1 1 1 1 1 1 1 7.5405e-06 0.00644 4q gain 5 (3%) 157 0.54089 1 0.77874 1 0.93048 1 1 1 0.70731 1 0.73662 1 0.06328 1 1 1 1 1 1 1 0.0026545 1 5p gain 34 (21%) 128 0.1462 1 0.49024 1 0.75417 1 0.11313 1 0.65788 1 0.58789 1 0.085438 1 0.072581 1 0.10747 1 0.34584 1 0.65356 1 5q gain 22 (14%) 140 0.31922 1 0.55662 1 0.36436 1 0.73435 1 0.67005 1 0.78291 1 0.36867 1 0.21678 1 1 1 0.72436 1 0.26435 1 6p gain 40 (25%) 122 0.91944 1 0.91775 1 0.32781 1 0.2743 1 0.046288 1 0.042008 1 0.46653 1 0.18722 1 0.033187 1 0.37954 1 0.32709 1 6q gain 35 (22%) 127 0.75937 1 0.83679 1 0.047593 1 0.28904 1 0.083578 1 0.021962 1 0.56583 1 0.072581 1 0.0202 1 0.27887 1 0.85489 1 7p gain 100 (62%) 62 0.26973 1 0.4185 1 0.052566 1 0.43257 1 0.17775 1 0.79782 1 0.62836 1 0.0046527 1 1 1 0.4957 1 0.13773 1 7q gain 83 (51%) 79 0.59936 1 0.29378 1 0.015468 1 0.52061 1 0.074437 1 0.39009 1 0.63626 1 0.0076435 1 1 1 0.27698 1 0.90205 1 8p gain 39 (24%) 123 0.89255 1 0.52962 1 0.088488 1 0.19232 1 0.597 1 0.46668 1 0.58144 1 1 1 1 1 0.2051 1 0.068642 1 8q gain 88 (54%) 74 0.088796 1 0.52603 1 0.038471 1 0.20107 1 0.16293 1 0.21874 1 0.75271 1 0.082957 1 0.22063 1 0.10919 1 0.31848 1 9p gain 42 (26%) 120 0.63665 1 0.40207 1 0.17446 1 0.81572 1 0.69703 1 0.75502 1 1 1 0.32851 1 1 1 0.52423 1 0.66424 1 9q gain 33 (20%) 129 0.64811 1 0.16948 1 0.01404 1 0.93579 1 0.89942 1 0.92797 1 0.44075 1 0.47052 1 1 1 1 1 0.84591 1 10p gain 12 (7%) 150 0.93862 1 0.73308 1 0.8842 1 0.529 1 0.85166 1 0.67247 1 0.77241 1 0.60054 1 0.37459 1 1 1 0.18385 1 10q gain 6 (4%) 156 0.32156 1 0.76058 1 0.8022 1 0.64089 1 0.55519 1 0.73662 1 0.09382 1 1 1 0.20554 1 1 1 0.5707 1 11p gain 30 (19%) 132 0.34174 1 0.66563 1 0.78175 1 0.60796 1 0.40296 1 0.30734 1 0.84076 1 0.074686 1 1 1 1 1 0.52581 1 11q gain 25 (15%) 137 0.70104 1 0.24731 1 0.66126 1 0.39129 1 0.20632 1 0.11237 1 1 1 0.13025 1 0.59147 1 1 1 0.022441 1 12p gain 33 (20%) 129 0.70203 1 0.40159 1 0.73163 1 0.49227 1 0.36076 1 0.62595 1 0.70017 1 0.47052 1 0.099581 1 0.26486 1 0.44999 1 12q gain 23 (14%) 139 0.77617 1 0.228 1 0.86731 1 0.70065 1 0.63271 1 0.94208 1 0.50839 1 1 1 1 1 1 1 0.69771 1 13q gain 110 (68%) 52 0.057823 1 0.37338 1 0.32681 1 0.32111 1 0.031052 1 0.03694 1 0.50085 1 0.00070767 0.604 1 1 0.94901 1 0.87966 1 14q gain 8 (5%) 154 0.29785 1 0.96785 1 0.80045 1 1 1 0.44533 1 0.82477 1 0.4709 1 1 1 0.26566 1 1 1 0.74598 1 15q gain 3 (2%) 159 NA NA 0.74657 1 0.20477 1 0.052653 1 0.17064 1 1 1 0.093202 1 0.23111 1 1 1 1 1 0.44344 1 16p gain 39 (24%) 123 0.91773 1 0.91477 1 0.067807 1 0.74052 1 0.33839 1 0.80989 1 1 1 0.039214 1 0.15122 1 0.69719 1 0.93125 1 16q gain 39 (24%) 123 0.35325 1 0.83539 1 0.45535 1 0.94428 1 0.1464 1 0.30978 1 0.85426 1 0.039214 1 0.15122 1 0.9326 1 0.43939 1 17p gain 8 (5%) 154 0.61955 1 0.54843 1 0.81332 1 0.047423 1 0.70208 1 0.82477 1 1 1 0.50982 1 1 1 1 1 0.55088 1 17q gain 30 (19%) 132 0.86912 1 0.75871 1 0.7512 1 1 1 0.5938 1 0.32988 1 0.54636 1 0.4648 1 0.59407 1 0.45521 1 0.26269 1 18p gain 8 (5%) 154 0.9329 1 0.3963 1 0.066698 1 0.38415 1 0.49593 1 0.28658 1 0.72817 1 0.13497 1 0.26566 1 0.094104 1 0.22993 1 18q gain 6 (4%) 156 0.20324 1 0.39748 1 0.079413 1 0.17029 1 0.084585 1 0.14489 1 0.22063 1 0.412 1 0.20554 1 0.040991 1 0.17502 1 19p gain 31 (19%) 131 0.87041 1 0.91794 1 0.71286 1 0.3348 1 0.83386 1 0.31068 1 0.54863 1 0.072677 1 1 1 0.49161 1 0.82115 1 19q gain 30 (19%) 132 0.52912 1 0.75111 1 0.68352 1 0.22857 1 0.74192 1 0.29857 1 0.68597 1 0.074686 1 1 1 0.23879 1 0.038224 1 20p gain 104 (64%) 58 0.20893 1 0.17404 1 0.040459 1 0.81629 1 0.34247 1 0.85455 1 0.25549 1 0.012737 1 1 1 0.11994 1 0.8226 1 20q gain 142 (88%) 20 0.036382 1 0.14205 1 0.084467 1 0.53 1 0.023016 1 0.63419 1 0.81136 1 0.0010598 0.903 0.55246 1 0.10999 1 0.55705 1 21q gain 10 (6%) 152 0.74986 1 0.61727 1 0.30612 1 0.75193 1 0.90533 1 0.63855 1 1 1 1 1 1 1 0.66087 1 0.12528 1 22q gain 9 (6%) 153 0.0029623 1 0.9047 1 0.47534 1 0.7071 1 0.39035 1 1 1 1 1 1 1 1 1 0.6103 1 0.35942 1 xq gain 32 (20%) 130 0.82665 1 0.23866 1 0.50286 1 0.13509 1 0.24607 1 0.5437 1 0.23473 1 0.4648 1 0.59931 1 0.75627 1 0.67659 1 1p loss 44 (27%) 118 0.39939 1 0.77307 1 0.90151 1 0.72288 1 0.54231 1 0.89557 1 0.29252 1 0.020567 1 0.34569 1 0.75874 1 0.42406 1 1q loss 25 (15%) 137 0.74189 1 0.90983 1 0.5097 1 0.5883 1 0.5593 1 0.58334 1 0.079403 1 0.22114 1 0.23196 1 0.75926 1 0.64653 1 2p loss 11 (7%) 151 0.49066 1 0.0011208 0.954 0.3467 1 0.61439 1 0.4911 1 1 1 0.55096 1 0.59242 1 0.34871 1 0.70522 1 0.87786 1 2q loss 6 (4%) 156 0.51528 1 0.018221 1 0.24887 1 1 1 0.046682 1 0.7757 1 1 1 1 1 1 1 1 1 1.3851e-08 1.19e-05 3p loss 15 (9%) 147 0.14022 1 0.71773 1 0.038716 1 0.14452 1 0.20665 1 0.020108 1 0.054481 1 0.07945 1 0.096746 1 0.011944 1 0.092584 1 3q loss 10 (6%) 152 0.096074 1 0.74274 1 0.029838 1 0.40012 1 0.16648 1 0.042157 1 0.11166 1 0.0029725 1 0.045193 1 0.017668 1 0.15772 1 4p loss 58 (36%) 104 0.41567 1 0.52149 1 0.58113 1 0.51601 1 0.53731 1 0.94135 1 0.51074 1 0.38022 1 0.022616 1 0.20797 1 0.44131 1 4q loss 65 (40%) 97 0.17982 1 0.95719 1 0.56574 1 0.52482 1 0.80689 1 0.80007 1 0.26241 1 0.25179 1 0.038661 1 0.13665 1 0.5857 1 5p loss 26 (16%) 136 0.44478 1 0.80901 1 0.81163 1 0.84596 1 0.49136 1 0.94937 1 0.088363 1 0.69657 1 0.24687 1 1 1 0.092767 1 5q loss 40 (25%) 122 0.25902 1 0.3859 1 0.86495 1 0.86844 1 0.88617 1 0.7514 1 0.58517 1 0.18722 1 0.0036795 1 0.64107 1 0.57274 1 6p loss 13 (8%) 149 0.013686 1 0.71624 1 0.099342 1 0.4287 1 0.026611 1 0.71547 1 1 1 0.064307 1 0.39961 1 0.41895 1 0.87044 1 6q loss 22 (14%) 140 0.082331 1 0.83732 1 0.010759 1 0.42547 1 0.071725 1 1 1 0.17581 1 0.01375 1 0.58961 1 0.64427 1 0.26951 1 7q loss 3 (2%) 159 NA NA 0.2588 1 0.93092 1 0.69247 1 0.43045 1 1 1 0.59272 1 0.23111 1 1 1 1 1 1.4367e-08 1.23e-05 8p loss 75 (46%) 87 0.23439 1 0.46517 1 0.85463 1 0.89418 1 0.32094 1 0.66256 1 0.75259 1 0.77266 1 0.41671 1 0.9095 1 0.040462 1 8q loss 11 (7%) 151 0.85773 1 0.67238 1 0.98605 1 0.83111 1 0.59293 1 0.67247 1 0.067203 1 1 1 1 1 1 1 0.64894 1 9p loss 22 (14%) 140 0.017074 1 0.96009 1 0.18819 1 0.092121 1 1 1 0.047524 1 0.36867 1 1 1 0.58961 1 0.0097452 1 0.63511 1 9q loss 22 (14%) 140 0.015438 1 0.88207 1 0.51879 1 0.04715 1 0.41863 1 0.12127 1 0.36867 1 1 1 0.58961 1 0.014044 1 0.089104 1 10p loss 32 (20%) 130 0.098327 1 0.0045344 1 0.60409 1 0.66767 1 0.93159 1 0.27847 1 0.55788 1 0.023486 1 0.091998 1 0.22765 1 0.63947 1 10q loss 37 (23%) 125 0.5956 1 0.068759 1 0.49849 1 0.80033 1 1 1 0.28102 1 0.34814 1 0.077283 1 0.13288 1 0.1409 1 0.81701 1 11p loss 24 (15%) 138 0.83291 1 0.47217 1 0.35121 1 0.24243 1 0.18407 1 0.15614 1 1 1 0.089756 1 0.21722 1 0.31619 1 0.06837 1 11q loss 30 (19%) 132 0.18956 1 0.90861 1 0.72338 1 0.60796 1 0.96325 1 0.17195 1 1 1 0.043552 1 0.077753 1 0.23805 1 0.35243 1 12p loss 22 (14%) 140 0.089997 1 0.79208 1 0.6227 1 0.57957 1 0.50939 1 0.73619 1 0.49055 1 0.21785 1 0.58961 1 1 1 0.99343 1 12q loss 20 (12%) 142 0.033609 1 0.31201 1 0.57399 1 0.94162 1 0.69812 1 0.70795 1 1 1 0.36988 1 0.55246 1 1 1 0.96016 1 13q loss 8 (5%) 154 0.30952 1 0.58182 1 0.49423 1 0.46909 1 0.35 1 0.17052 1 1 1 0.13497 1 1 1 0.6103 1 0.44478 1 14q loss 65 (40%) 97 0.24041 1 0.85032 1 0.30552 1 0.61416 1 0.19072 1 0.87401 1 0.26241 1 0.015522 1 0.68474 1 0.28773 1 0.90262 1 15q loss 72 (44%) 90 0.14418 1 0.96919 1 0.2769 1 0.30639 1 0.54665 1 0.80359 1 0.15322 1 1 1 0.089154 1 0.86759 1 0.039136 1 16p loss 9 (6%) 153 0.016427 1 0.25397 1 0.032774 1 0.77617 1 0.091838 1 1 1 0.73312 1 0.50982 1 1 1 1 1 0.57991 1 16q loss 14 (9%) 148 0.062473 1 0.54329 1 0.24944 1 0.80002 1 0.013965 1 0.89945 1 0.7842 1 1 1 0.42379 1 0.73607 1 0.19659 1 17p loss 104 (64%) 58 0.78549 1 0.062547 1 0.77815 1 0.041501 1 0.92784 1 0.27316 1 0.74233 1 0.22607 1 1 1 0.75263 1 0.7427 1 17q loss 25 (15%) 137 0.22073 1 0.66032 1 0.85614 1 0.45907 1 0.88061 1 0.89532 1 0.66341 1 1 1 0.23196 1 0.4973 1 0.67225 1 18p loss 125 (77%) 37 0.77481 1 0.20148 1 0.41344 1 0.28782 1 0.63227 1 0.28878 1 1 1 0.03219 1 1 1 0.52983 1 0.52884 1 18q loss 135 (83%) 27 0.97555 1 0.14782 1 0.31384 1 0.057134 1 0.75387 1 0.29075 1 0.67374 1 0.43943 1 1 1 0.61503 1 0.76837 1 19p loss 22 (14%) 140 0.41481 1 0.91442 1 0.035287 1 0.71873 1 0.32939 1 0.78291 1 1 1 0.22126 1 0.58961 1 1 1 0.28141 1 19q loss 21 (13%) 141 0.63968 1 0.54135 1 0.032716 1 0.48192 1 0.44924 1 0.82268 1 0.63966 1 0.36988 1 0.57137 1 0.60993 1 0.37623 1 20p loss 25 (15%) 137 0.97847 1 0.46369 1 0.061296 1 0.85962 1 0.47802 1 1 1 0.83 1 0.42405 1 0.59147 1 0.32908 1 0.69181 1 21q loss 66 (41%) 96 0.85202 1 0.56285 1 0.6524 1 0.1316 1 0.19716 1 0.57208 1 0.63067 1 0.24371 1 0.6883 1 0.3846 1 0.061917 1 22q loss 57 (35%) 105 0.0076753 1 0.16068 1 0.34839 1 0.41155 1 0.012112 1 0.56282 1 0.74439 1 1 1 0.4255 1 0.67495 1 0.47666 1 xq loss 25 (15%) 137 0.27563 1 0.9275 1 0.44127 1 0.065854 1 0.32192 1 0.59571 1 0.28218 1 0.42405 1 1 1 0.36449 1 0.69244 1