Clinical Features	MRNA_CNMF		MRNA_CHIERARCHICAL		CN_CNMF		METHLYATION_CNMF		RPPA_CNMF		RPPA_CHIERARCHICAL		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL		MIRSEQ_MATURE_CNMF		MIRSEQ_MATURE_CHIERARCHICAL	
	nCNV (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q
1p	56 (35%)	106	0.60208	1	0.037277	1	0.0012446	0.581	0.28845	1	0.57569	1	0.71155	1	0.83002	1	0.94059	1	0.50136	1	0.46696	1	0.72902	1	0.97504	1
1q	57 (35%)	105	0.60208	1	0.2909	1	0.01157	1	0.46002	1	0.28635	1	0.68703	1	0.87747	1	0.90164	1	0.20467	1	0.47159	1	0.36543	1	0.8958	1
2p	50 (31%)	112	0.89406	1	0.17996	1	0.010481	1	0.2116	1	0.60309	1	0.98657	1	0.27059	1	0.34992	1	0.56632	1	0.082266	1	0.95058	1	0.01832	1
2q	47 (29%)	115	0.24228	1	0.17996	1	0.0070648	1	0.11276	1	0.26623	1	0.83902	1	0.065893	1	0.083376	1	0.18055	1	0.30623	1	0.45456	1	0.010693	1
3p	42 (26%)	120	1	1	0.53666	1	0.3704	1	0.57597	1	0.10641	1	0.079635	1	0.1761	1	0.22766	1	0.091707	1	0.1148	1	0.51286	1	0.73282	1
3q	44 (27%)	118	0.8676	1	0.92687	1	0.24016	1	0.55506	1	0.24352	1	0.17644	1	0.26798	1	0.56824	1	0.074175	1	0.18237	1	0.82215	1	0.97847	1
4p	67 (41%)	95	0.60563	1	0.14052	1	8.9986e-05	0.0425	0.027473	1	0.45118	1	0.076399	1	0.98286	1	0.71138	1	0.81696	1	0.04768	1	0.43294	1	0.51943	1
4q	70 (43%)	92	0.5385	1	0.11605	1	1.4901e-05	0.00712	0.013216	1	0.51163	1	0.34868	1	0.85371	1	0.89983	1	0.87844	1	0.063198	1	0.76725	1	0.72139	1
5p	60 (37%)	102	0.21569	1	0.3285	1	0.012517	1	0.033059	1	0.85448	1	0.37279	1	0.2172	1	0.20054	1	0.88026	1	0.43534	1	1	1	0.9388	1
5q	62 (38%)	100	0.088272	1	0.0047998	1	0.0013885	0.646	0.089862	1	0.43441	1	0.73991	1	0.26579	1	0.4561	1	0.90647	1	0.29608	1	0.93147	1	0.96924	1
6p	53 (33%)	109	0.89667	1	0.60683	1	0.0027341	1	0.023522	1	0.60615	1	0.8496	1	0.88573	1	0.82846	1	0.43498	1	0.81809	1	0.16999	1	0.94094	1
6q	57 (35%)	105	0.28595	1	0.34835	1	0.0095406	1	0.14264	1	0.56032	1	0.743	1	0.80825	1	0.58404	1	0.61678	1	0.81627	1	0.32862	1	0.47232	1
7p	102 (63%)	60	0.0050593	1	0.011499	1	2.5807e-05	0.0123	0.0052602	1	0.63813	1	0.51763	1	0.0026345	1	7.3177e-05	0.0346	0.061221	1	0.021147	1	0.11739	1	0.23761	1
7q	86 (53%)	76	0.079957	1	0.076019	1	0.00017066	0.0802	0.27306	1	0.77745	1	0.96713	1	0.078261	1	0.022881	1	0.42096	1	0.41588	1	0.57111	1	0.76305	1
8p	114 (70%)	48	0.038299	1	0.14158	1	6.1679e-08	2.96e-05	0.32799	1	0.85117	1	0.71183	1	0.004559	1	0.065679	1	0.81913	1	0.40645	1	0.31419	1	0.074577	1
8q	99 (61%)	63	0.11588	1	0.22902	1	1.0346e-06	0.000496	0.041659	1	0.57384	1	0.69764	1	0.044435	1	0.074821	1	0.36238	1	0.40861	1	0.8122	1	0.17348	1
9p	64 (40%)	98	0.1793	1	0.54873	1	0.14928	1	0.04925	1	0.84045	1	0.39507	1	0.76206	1	0.85331	1	0.13715	1	0.12885	1	1	1	0.15947	1
9q	55 (34%)	107	0.26378	1	0.64815	1	0.33718	1	0.16359	1	0.86843	1	0.49913	1	0.95398	1	1	1	0.20772	1	0.3119	1	1	1	0.22911	1
10p	44 (27%)	118	0.27624	1	0.064351	1	0.18464	1	0.31055	1	0.20766	1	0.12963	1	0.16422	1	0.17943	1	0.84096	1	0.59688	1	0.80043	1	0.41218	1
10q	43 (27%)	119	0.35323	1	0.57968	1	0.05486	1	0.19555	1	0.1734	1	0.051309	1	0.072424	1	0.10764	1	0.61175	1	0.51714	1	0.80224	1	0.3338	1
11p	54 (33%)	108	0.27974	1	0.16683	1	0.093108	1	0.89012	1	0.45872	1	0.73768	1	0.49104	1	0.38932	1	0.22021	1	0.11517	1	0.012186	1	0.097501	1
11q	55 (34%)	107	0.065484	1	0.081616	1	0.04871	1	0.39066	1	0.25209	1	0.57398	1	0.6114	1	0.40196	1	0.16078	1	0.14306	1	0.11063	1	0.24813	1
12p	55 (34%)	107	0.29233	1	0.77704	1	0.033086	1	0.29499	1	0.22231	1	0.14111	1	0.64707	1	0.85584	1	0.83026	1	0.93595	1	0.89405	1	0.96748	1
12q	43 (27%)	119	0.44641	1	0.24144	1	0.33132	1	0.56987	1	0.23858	1	0.20622	1	0.87642	1	0.58091	1	0.76424	1	0.58279	1	0.83723	1	0.67808	1
13q	118 (73%)	44	0.60799	1	0.79224	1	1.809e-05	0.00863	0.14043	1	0.83757	1	0.094826	1	0.45581	1	0.00017242	0.0809	0.027427	1	0.021631	1	0.15526	1	0.31717	1
14q	73 (45%)	89	0.27954	1	0.62681	1	0.0020748	0.961	0.57356	1	0.81364	1	0.21081	1	0.95173	1	0.6936	1	0.13984	1	0.29246	1	0.46972	1	0.79752	1
15q	75 (46%)	87	0.42237	1	0.022083	1	0.0045865	1	0.95658	1	0.15824	1	0.24977	1	0.63535	1	0.4806	1	0.61196	1	1	1	0.90049	1	0.80913	1
16p	48 (30%)	114	0.24822	1	0.53972	1	0.007982	1	0.42432	1	0.6684	1	0.98322	1	0.48577	1	0.8917	1	0.083759	1	0.31312	1	0.095445	1	0.32483	1
16q	53 (33%)	109	0.40894	1	0.43635	1	0.00065562	0.307	0.72049	1	0.73956	1	0.90668	1	0.41972	1	0.73449	1	0.14749	1	0.09336	1	0.074019	1	0.12538	1
17p	112 (69%)	50	0.066257	1	0.12789	1	0.014062	1	0.54636	1	0.90106	1	0.55867	1	0.362	1	0.69921	1	0.99382	1	0.30003	1	0.80233	1	0.69351	1
17q	55 (34%)	107	0.44744	1	1	1	0.028023	1	0.18239	1	1	1	0.87969	1	0.61039	1	0.42653	1	0.20437	1	0.69831	1	0.75645	1	0.99503	1
18p	133 (82%)	29	0.076052	1	0.24433	1	0.0001587	0.0747	0.035359	1	0.79886	1	0.44191	1	0.4338	1	0.16174	1	0.068502	1	0.032405	1	0.24805	1	0.90478	1
18q	141 (87%)	21	0.034511	1	0.090422	1	3.8196e-05	0.0181	0.15206	1	1	1	0.90195	1	0.62686	1	0.20746	1	0.093099	1	0.038946	1	0.01198	1	0.85871	1
19p	53 (33%)	109	0.041522	1	0.056185	1	4.9489e-05	0.0235	0.10878	1	0.82091	1	0.62858	1	0.94057	1	0.83058	1	0.033962	1	0.16246	1	0.95414	1	0.74269	1
19q	51 (31%)	111	0.14032	1	0.16902	1	0.0024862	1	0.062066	1	0.79913	1	0.65557	1	0.96424	1	0.79099	1	0.052566	1	0.18347	1	0.63369	1	0.24053	1
20p	129 (80%)	33	0.032255	1	0.17093	1	0.15177	1	0.28171	1	0.41958	1	0.96648	1	0.52294	1	0.024508	1	0.080333	1	0.36171	1	0.057895	1	0.24852	1
20q	143 (88%)	19	0.0077699	1	0.37582	1	0.0019168	0.889	0.13828	1	0.19393	1	0.076606	1	0.65218	1	0.0013627	0.635	0.13605	1	0.14341	1	0.33822	1	0.36903	1
21q	76 (47%)	86	0.42198	1	0.11126	1	0.0081257	1	0.9366	1	1	1	0.24662	1	0.9264	1	0.77058	1	0.24161	1	0.21328	1	0.65138	1	0.27415	1
22q	66 (41%)	96	0.5385	1	0.078385	1	0.0097938	1	0.61719	1	0.51912	1	0.75393	1	0.22832	1	0.43431	1	0.013956	1	0.45982	1	0.43103	1	0.40373	1
xq	57 (35%)	105	0.28595	1	0.3973	1	0.04745	1	0.35607	1	0.78226	1	0.64707	1	0.38667	1	0.91384	1	0.99675	1	0.70549	1	0.48674	1	0.49308	1