Signaling events mediated by the Hedgehog family Entity Mean Std Dev Mean of Up Perturbations Number of Up Perturbations Mean of Down Perturbations Number of Down Perturbations Number of Total Perturbations TGFB2 0.017 0.12 0.299 1.0 -0.448 15.0 16.0 IHH 0.031 0.052 0.144 5.0 -0.134 20.0 25.0 SHH Np/Cholesterol/GAS1 0.015 0.029 -9999.0 0.0 -0.175 5.0 5.0 LRPAP1 0.027 0.006 -9999.0 0.0 -9999.0 0.0 0.0 dorsoventral neural tube patterning -0.015 0.028 0.175 5.0 -9999.0 0.0 5.0 SMO/beta Arrestin2 0.005 0.137 -9999.0 0.0 -0.386 14.0 14.0 SMO -0.016 0.126 -9999.0 0.0 -0.388 17.0 17.0 AKT1 -0.002 0.102 -9999.0 0.0 -0.381 11.0 11.0 ARRB2 0.026 0.009 0.121 1.0 -9999.0 0.0 1.0 BOC 0.019 0.07 -9999.0 0.0 -0.331 10.0 10.0 ADRBK1 0.027 0.005 -9999.0 0.0 -9999.0 0.0 0.0 heart looping -0.016 0.125 -9999.0 0.0 -0.382 17.0 17.0 STIL 0.02 0.089 0.188 34.0 -0.236 15.0 49.0 DHH N/PTCH2 0.032 0.071 0.176 2.0 -0.231 17.0 19.0 DHH N/PTCH1 0.021 0.113 0.208 1.0 -0.287 28.0 29.0 PIK3CA 0.022 0.043 -9999.0 0.0 -0.331 4.0 4.0 DHH 0.02 0.083 0.121 30.0 -0.331 13.0 43.0 PTHLH -0.003 0.177 0.302 1.0 -0.615 19.0 20.0 determination of left/right symmetry -0.016 0.125 -9999.0 0.0 -0.382 17.0 17.0 PIK3R1 0.024 0.031 -9999.0 0.0 -0.331 2.0 2.0 skeletal system development -0.003 0.176 0.302 1.0 -0.609 19.0 20.0 IHH N/Hhip 0.043 0.041 0.188 2.0 -0.088 1.0 3.0 DHH N/Hhip 0.036 0.066 0.176 4.0 -0.232 13.0 17.0 mol:Cholesterol -0.0 0.0 -9999.0 0.0 -9999.0 0.0 0.0 heart development -0.016 0.125 -9999.0 0.0 -0.382 17.0 17.0 pancreas development 0.02 0.033 0.121 18.0 -9999.0 0.0 18.0 HHAT 0.019 0.048 -9999.0 0.0 -0.331 5.0 5.0 PI3K 0.033 0.043 -9999.0 0.0 -0.269 5.0 5.0 EntrezGene:84976 0.0 0.0 -9999.0 0.0 -9999.0 0.0 0.0 GAS1 0.022 0.038 -9999.0 0.0 -0.331 3.0 3.0 somite specification -0.016 0.125 -9999.0 0.0 -0.382 17.0 17.0 SHH Np/Cholesterol/PTCH1 0.01 0.07 -9999.0 0.0 -0.244 15.0 15.0 SHH Np/Cholesterol/PTCH2 0.017 0.034 0.157 2.0 -0.178 6.0 8.0 SHH Np/Cholesterol/Megalin -0.007 0.108 0.193 14.0 -0.18 68.0 82.0 SHH -0.012 0.027 -9999.0 0.0 -0.235 3.0 3.0 catabolic process 0.01 0.106 -9999.0 0.0 -0.358 20.0 20.0 SMO/Vitamin D3 0.006 0.104 0.259 5.0 -0.289 18.0 23.0 SHH Np/Cholesterol/Hhip 0.015 0.037 0.157 6.0 -0.175 3.0 9.0 LRP2 -0.047 0.18 0.121 80.0 -0.331 78.0 158.0 receptor-mediated endocytosis -0.033 0.129 0.244 2.0 -0.325 28.0 30.0 SHH Np/Cholesterol/BOC 0.016 0.046 0.2 1.0 -0.194 10.0 11.0 SHH Np/Cholesterol/CDO 0.014 0.031 -9999.0 0.0 -0.178 6.0 6.0 mesenchymal cell differentiation -0.015 0.036 0.174 3.0 -0.155 6.0 9.0 mol:Vitamin D3 0.037 0.1 0.219 37.0 -0.245 15.0 52.0 IHH N/PTCH2 0.037 0.051 0.199 1.0 -0.252 4.0 5.0 CDON 0.021 0.038 -9999.0 0.0 -0.331 3.0 3.0 IHH N/PTCH1 0.021 0.111 0.231 1.0 -0.351 21.0 22.0 Megalin/LRPAP1 -0.018 0.135 -9999.0 0.0 -0.231 78.0 78.0 PTCH2 0.024 0.045 -9999.0 0.0 -0.331 4.0 4.0 SHH Np/Cholesterol 0.01 0.02 -9999.0 0.0 -0.175 3.0 3.0 PTCH1 0.01 0.106 -9999.0 0.0 -0.359 20.0 20.0 HHIP 0.02 0.033 0.121 18.0 -9999.0 0.0 18.0