Clinical Features MRNA_CNMF MRNA_CHIERARCHICAL CN_CNMF METHLYATION_CNMF RPPA_CNMF RPPA_CHIERARCHICAL MRNASEQ_CNMF MRNASEQ_CHIERARCHICAL MIRSEQ_CNMF MIRSEQ_CHIERARCHICAL MIRSEQ_MATURE_CNMF MIRSEQ_MATURE_CHIERARCHICAL nCNV (%) nWild-Type Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q 1p gain 43 (8%) 471 0.53382 1 0.31209 1 2.354e-09 1.72e-06 0.0014918 0.7 0.065025 1 0.13735 1 0.00010075 0.0545 0.0010326 0.494 4.7559e-06 0.00287 1.937e-05 0.0113 0.00020605 0.108 0.0040072 1 1q gain 173 (34%) 341 0.17408 1 0.20088 1 0.0018922 0.884 0.14836 1 0.085518 1 0.01403 1 0.030178 1 0.053325 1 0.017993 1 0.2796 1 0.85472 1 0.059246 1 2p gain 88 (17%) 426 0.85548 1 0.68288 1 2.0371e-33 1.8e-30 1.5254e-08 1.09e-05 0.05453 1 1 1 2.0566e-07 0.000139 1.8461e-07 0.000125 2.8485e-06 0.00177 1.4278e-06 0.000905 0.00026355 0.135 3.0038e-05 0.0171 2q gain 71 (14%) 443 0.34265 1 1 1 3.4762e-30 3.07e-27 4.8099e-07 0.000318 0.034152 1 0.81277 1 1.2373e-05 0.00733 2.8399e-06 0.00177 1.2231e-05 0.00725 3.2036e-06 0.00198 0.00026748 0.137 4.0528e-05 0.0229 3p gain 42 (8%) 472 NA NA NA NA 3.0993e-18 2.6e-15 0.0035274 1 0.39534 1 0.71272 1 9.8342e-05 0.0533 0.0029645 1 0.036195 1 0.0034662 1 0.052569 1 0.024131 1 3q gain 76 (15%) 438 0.6175 1 0.84716 1 3.3202e-24 2.9e-21 5.9042e-10 4.39e-07 0.16288 1 0.044361 1 5.8304e-13 4.62e-10 1.5033e-11 1.17e-08 3.5506e-06 0.00218 1.6255e-08 1.16e-05 0.00023546 0.121 4.298e-07 0.000286 4p gain 12 (2%) 502 NA NA NA NA 0.000165 0.0873 0.65578 1 0.45123 1 0.006909 1 0.0071955 1 0.034294 1 0.25796 1 0.033961 1 0.33589 1 0.17802 1 4q gain 8 (2%) 506 NA NA NA NA 0.0071958 1 0.61814 1 NA NA 0.14038 1 0.17761 1 0.39804 1 0.28601 1 0.25661 1 0.54674 1 0.11653 1 5p gain 49 (10%) 465 0.90247 1 0.31209 1 3.0337e-15 2.48e-12 2.5162e-07 0.000169 0.074274 1 1 1 1.8343e-11 1.42e-08 5.1345e-08 3.58e-05 2.5145e-08 1.77e-05 2.0497e-06 0.00129 3.2118e-05 0.0183 7.6422e-07 0.000494 5q gain 19 (4%) 495 NA NA NA NA 2.0718e-05 0.012 0.052848 1 0.29654 1 1 1 0.0035252 1 0.005381 1 0.010541 1 0.0062401 1 0.033762 1 0.0012391 0.584 6p gain 74 (14%) 440 0.20937 1 0.1733 1 5.5095e-26 4.83e-23 6.6802e-07 0.000434 0.168 1 0.093484 1 1.476e-08 1.06e-05 8.3848e-08 5.77e-05 1.3504e-06 0.000859 2.9094e-06 0.00181 0.013913 1 0.0082235 1 6q gain 60 (12%) 454 0.20937 1 0.1733 1 4.4186e-19 3.74e-16 0.00086 0.413 0.094577 1 0.044361 1 0.00025001 0.129 0.00015898 0.0846 0.0020179 0.938 0.0010755 0.509 0.46242 1 0.19798 1 7p gain 63 (12%) 451 0.85548 1 1 1 2.2049e-20 1.89e-17 0.011115 1 0.81147 1 0.44965 1 0.015381 1 0.16042 1 0.11008 1 0.023357 1 0.29208 1 0.52049 1 7q gain 61 (12%) 453 0.85548 1 1 1 2.4349e-20 2.09e-17 0.016165 1 0.84162 1 0.17341 1 0.094346 1 0.35583 1 0.33057 1 0.13156 1 0.64809 1 0.72123 1 8p gain 114 (22%) 400 0.35538 1 0.46757 1 1.8312e-18 1.54e-15 0.96167 1 0.026403 1 0.84523 1 0.054407 1 0.19671 1 0.073095 1 0.2988 1 0.58904 1 0.32023 1 8q gain 150 (29%) 364 0.01058 1 0.014979 1 2.4236e-23 2.11e-20 0.24487 1 0.00029045 0.148 0.72794 1 0.00026123 0.134 0.00015107 0.0805 0.00021001 0.11 0.003653 1 0.10084 1 0.14415 1 9p gain 20 (4%) 494 NA NA NA NA 0.00067613 0.334 0.011924 1 0.16094 1 0.36663 1 0.076844 1 0.0094428 1 0.0016068 0.752 0.077705 1 0.26672 1 0.31157 1 9q gain 9 (2%) 505 NA NA NA NA 0.1549 1 0.13628 1 NA NA 0.14038 1 0.48348 1 0.19856 1 0.02529 1 0.14459 1 0.33589 1 0.28903 1 10p gain 112 (22%) 402 0.0071292 1 0.042602 1 3.743e-06 0.00229 0.73549 1 0.1917 1 0.21903 1 0.28953 1 0.012738 1 0.4432 1 0.36691 1 0.13641 1 0.48982 1 10q gain 104 (20%) 410 0.0048648 1 0.037382 1 1.1858e-07 8.1e-05 0.70687 1 0.11732 1 0.15595 1 0.095698 1 0.033342 1 0.35276 1 0.13964 1 0.14004 1 0.29639 1 11p gain 22 (4%) 492 0.039088 1 0.09018 1 2.4783e-06 0.00155 0.092423 1 0.038292 1 1 1 0.00044101 0.223 0.0023208 1 0.03445 1 0.036917 1 0.22775 1 0.2501 1 11q gain 19 (4%) 495 NA NA NA NA 4.5373e-06 0.00275 0.10238 1 0.1566 1 0.71241 1 0.0037432 1 0.011669 1 0.16032 1 0.18678 1 0.73488 1 0.40725 1 12p gain 65 (13%) 449 0.38706 1 1 1 7.6819e-12 6.01e-09 4.2084e-05 0.0236 0.85711 1 0.81196 1 3.3834e-05 0.0192 4.6137e-05 0.0258 0.002997 1 0.0033231 1 0.0013222 0.621 0.00053356 0.267 12q gain 50 (10%) 464 0.38706 1 1 1 2.163e-09 1.58e-06 0.011232 1 0.89897 1 0.79627 1 0.021597 1 0.013437 1 0.2225 1 0.12166 1 0.05286 1 0.040122 1 13q gain 28 (5%) 486 0.1372 1 0.019423 1 4.4973e-10 3.35e-07 0.00014916 0.0797 0.22366 1 0.47748 1 2.6181e-07 0.000175 1.7481e-06 0.0011 3.9366e-06 0.0024 8.6265e-05 0.0471 0.039723 1 0.004251 1 14q gain 36 (7%) 478 1 1 0.76885 1 3.2252e-07 0.000215 0.0084638 1 0.22535 1 1 1 6.5226e-07 0.000425 1.8256e-05 0.0107 0.00043932 0.223 0.026825 1 0.36407 1 0.049177 1 15q gain 10 (2%) 504 NA NA NA NA 0.00023344 0.121 1 1 NA NA 1 1 1 1 0.43811 1 0.56767 1 0.63496 1 0.52757 1 0.83414 1 16p gain 23 (4%) 491 NA NA NA NA 4.5468e-06 0.00276 0.0077809 1 0.1566 1 0.71241 1 0.097405 1 0.13839 1 0.063812 1 0.28736 1 1 1 0.51505 1 16q gain 10 (2%) 504 NA NA NA NA 0.0024687 1 0.62771 1 0.85846 1 0.55767 1 0.25154 1 0.438 1 0.41516 1 0.63496 1 1 1 0.73934 1 17p gain 12 (2%) 502 NA NA NA NA 0.022729 1 0.32021 1 0.3258 1 0.55767 1 0.012812 1 0.0033146 1 0.25083 1 0.13117 1 0.71291 1 0.2943 1 17q gain 28 (5%) 486 NA NA NA NA 6.6813e-08 4.61e-05 3.6021e-05 0.0204 0.061978 1 0.67399 1 6.1508e-05 0.0341 1.9333e-05 0.0113 0.00042088 0.214 0.012533 1 0.074814 1 0.013861 1 18p gain 65 (13%) 449 0.33344 1 0.15766 1 3.6718e-24 3.2e-21 4.3289e-10 3.23e-07 0.018424 1 0.024198 1 4.1498e-15 3.38e-12 8.3186e-14 6.65e-11 4.6398e-12 3.64e-09 4.2353e-11 3.25e-08 1.1788e-06 0.000751 1.9382e-11 1.49e-08 18q gain 40 (8%) 474 0.2533 1 0.09018 1 2.8706e-12 2.26e-09 1.1644e-05 0.00692 0.2923 1 0.083143 1 1.9394e-08 1.37e-05 4.8277e-08 3.37e-05 3.9955e-08 2.8e-05 1.1177e-06 0.000715 0.00013803 0.074 5.1282e-07 0.000338 19p gain 50 (10%) 464 0.039088 1 0.0046615 1 7.0318e-23 6.09e-20 0.00054047 0.27 0.81187 1 0.15519 1 9.274e-12 7.23e-09 6.7925e-10 5.02e-07 2.2296e-08 1.57e-05 0.00012994 0.0698 0.032051 1 0.058705 1 19q gain 55 (11%) 459 NA NA NA NA 2.7515e-23 2.39e-20 2.2867e-05 0.0132 0.33053 1 0.47748 1 1.1872e-13 9.46e-11 2.8612e-14 2.3e-11 1.2619e-10 9.58e-08 3.4886e-07 0.000232 0.0033776 1 0.00071226 0.35 20p gain 106 (21%) 408 0.0080894 1 0.0010465 0.499 1.0584e-37 9.42e-35 7.9097e-11 6.04e-08 0.14308 1 0.81196 1 8.6965e-15 7.06e-12 8.5492e-14 6.82e-11 2.2187e-12 1.75e-09 5.1906e-08 3.61e-05 3.2089e-05 0.0183 3.7422e-08 2.63e-05 20q gain 123 (24%) 391 0.0020193 0.938 0.00021801 0.114 1.6689e-46 1.5e-43 5.2687e-12 4.13e-09 0.030294 1 0.37819 1 1.3587e-17 1.13e-14 2.4459e-15 2.01e-12 3.6484e-14 2.93e-11 5.6006e-09 4.05e-06 0.00010936 0.0591 1.5495e-08 1.1e-05 21q gain 36 (7%) 478 NA NA NA NA 2.017e-13 1.61e-10 0.0035513 1 0.47447 1 0.15057 1 9.3406e-07 0.000601 5.352e-06 0.00322 7.1352e-07 0.000462 6.5861e-05 0.0363 0.13623 1 0.0046908 1 22q gain 31 (6%) 483 NA NA NA NA 8.3961e-09 6.02e-06 3.9621e-09 2.88e-06 0.34118 1 0.05191 1 1.0786e-09 7.95e-07 5.3499e-10 3.98e-07 0.00016366 0.0867 2.7837e-05 0.0159 6.0667e-06 0.00362 4.7705e-07 0.000316 xq gain 61 (12%) 453 0.70442 1 0.84716 1 3.8741e-27 3.41e-24 0.77524 1 0.91734 1 0.32884 1 0.34852 1 0.84226 1 0.81557 1 1 1 0.15025 1 0.61366 1 1p loss 24 (5%) 490 NA NA NA NA 1.4339e-08 1.03e-05 5.9072e-06 0.00353 0.65486 1 0.15057 1 1.6029e-05 0.00942 2.6747e-05 0.0154 0.058609 1 7.9161e-05 0.0433 0.076902 1 0.0040376 1 1q loss 15 (3%) 499 NA NA NA NA 0.00011277 0.0607 0.0026267 1 NA NA 0.14038 1 0.00032301 0.165 0.0012325 0.582 0.098833 1 0.0060299 1 0.51188 1 0.1119 1 2p loss 10 (2%) 504 NA NA NA NA 0.00067935 0.334 0.35444 1 NA NA 0.14038 1 0.0034026 1 0.040531 1 0.10622 1 0.38376 1 0.90966 1 0.36375 1 2q loss 16 (3%) 498 NA NA NA NA 5.2534e-06 0.00316 0.20597 1 NA NA 0.14038 1 9.6586e-05 0.0526 0.004081 1 0.04573 1 0.028129 1 0.82832 1 0.31647 1 3p loss 49 (10%) 465 0.039088 1 0.0046615 1 3.7183e-19 3.15e-16 8.099e-07 0.000522 0.0086462 1 0.044361 1 2.3586e-12 1.86e-09 9.6768e-12 7.53e-09 8.4648e-08 5.82e-05 3.4656e-06 0.00214 0.0045344 1 5.9312e-05 0.0329 3q loss 29 (6%) 485 0.039088 1 0.0046615 1 3.2872e-10 2.47e-07 0.00052462 0.263 0.063668 1 0.20053 1 7.1316e-07 0.000462 1.7481e-06 0.0011 0.00048361 0.243 0.0070056 1 0.13986 1 0.018716 1 4p loss 98 (19%) 416 0.0038145 1 0.0004537 0.229 8.1762e-37 7.26e-34 2.5332e-16 2.1e-13 0.003895 1 0.34594 1 3.6409e-22 3.15e-19 1.5963e-20 1.37e-17 6.4688e-20 5.52e-17 1.5368e-14 1.24e-11 2.4333e-06 0.00152 2.2352e-09 1.63e-06 4q loss 97 (19%) 417 0.15099 1 0.027226 1 4.2118e-38 3.75e-35 8.9619e-17 7.46e-14 0.019843 1 0.34594 1 1.4757e-24 1.29e-21 3.7534e-20 3.21e-17 3.0397e-15 2.49e-12 2.7566e-15 2.26e-12 1.8269e-06 0.00115 5.017e-09 3.64e-06 5p loss 54 (11%) 460 0.15099 1 0.027226 1 1.6389e-18 1.38e-15 5.5259e-09 4e-06 0.03026 1 0.024198 1 9.883e-08 6.78e-05 1.6084e-10 1.22e-07 3.2198e-06 0.00199 6.1422e-07 0.000402 0.0026752 1 0.00014062 0.0752 5q loss 72 (14%) 442 0.012904 1 0.0019294 0.899 4.454e-28 3.93e-25 2.4747e-14 1.99e-11 0.002826 1 0.023265 1 3.6359e-15 2.96e-12 1.4796e-14 1.2e-11 1.1135e-10 8.46e-08 9.7441e-11 7.42e-08 3.5572e-05 0.0201 5.681e-07 0.000373 6p loss 16 (3%) 498 0.37937 1 0.09018 1 4.1514e-06 0.00252 0.01058 1 0.26073 1 0.36663 1 0.00018948 0.0999 0.004081 1 0.041883 1 0.00074287 0.363 0.31862 1 0.13397 1 6q loss 23 (4%) 491 0.37937 1 0.09018 1 8.0378e-09 5.78e-06 0.00017022 0.0899 0.42298 1 0.67399 1 5.3342e-07 0.00035 5.5314e-05 0.0308 0.0032775 1 2.1715e-05 0.0126 0.036573 1 0.0095837 1 7p loss 42 (8%) 472 0.039088 1 0.0046615 1 6.1682e-15 5.01e-12 0.00067518 0.334 0.068368 1 0.054573 1 9.7376e-10 7.19e-07 5.7964e-09 4.19e-06 5.1085e-06 0.00308 0.00078385 0.378 0.07742 1 0.0043427 1 7q loss 40 (8%) 474 NA NA NA NA 2.696e-19 2.29e-16 3.166e-08 2.23e-05 0.08442 1 0.00075245 0.366 8.7727e-15 7.11e-12 2.5289e-10 1.9e-07 1.9675e-11 1.51e-08 1.1177e-06 0.000715 0.00083323 0.401 3.9063e-06 0.00238 8p loss 74 (14%) 440 0.0080894 1 0.0010465 0.499 5.9147e-32 5.23e-29 1.4876e-15 1.23e-12 0.040047 1 0.58017 1 4.3452e-19 3.68e-16 7.4228e-17 6.19e-14 2.3637e-18 1.99e-15 9.3454e-12 7.28e-09 7.3078e-08 5.04e-05 5.9124e-09 4.26e-06 8q loss 24 (5%) 490 NA NA NA NA 5.791e-08 4.01e-05 2.8175e-07 0.000188 0.33257 1 1 1 8.972e-06 0.00534 2.6747e-05 0.0154 1.3348e-05 0.00786 0.0010697 0.507 0.00073416 0.359 6.973e-05 0.0384 9p loss 100 (19%) 414 0.00099729 0.478 9.7998e-05 0.0533 3.4109e-41 3.05e-38 5.0394e-11 3.86e-08 0.0026664 1 0.11338 1 5.7179e-20 4.88e-17 1.6548e-15 1.36e-12 3.2175e-15 2.63e-12 3.9169e-10 2.93e-07 0.0033916 1 4.5716e-05 0.0256 9q loss 117 (23%) 397 2.3489e-05 0.0135 1.1294e-06 0.000721 1.9354e-48 1.74e-45 1.2007e-11 9.33e-09 0.00075868 0.369 0.20498 1 2.7434e-21 2.36e-18 1.4085e-18 1.19e-15 8.6872e-22 7.5e-19 4.0481e-11 3.11e-08 0.00075838 0.369 1.3252e-05 0.00782 10p loss 40 (8%) 474 0.039088 1 0.0046615 1 6.0552e-18 5.07e-15 5.2587e-07 0.000346 0.082305 1 0.47748 1 3.7301e-09 2.72e-06 4.6551e-08 3.25e-05 1.4762e-08 1.06e-05 3.1764e-06 0.00197 0.0082501 1 0.00016105 0.0855 10q loss 38 (7%) 476 0.1372 1 0.019423 1 2.1965e-15 1.81e-12 6.2844e-07 0.00041 0.090743 1 0.73096 1 1.6199e-07 0.00011 1.3931e-06 0.000885 4.3521e-07 0.000289 4.0927e-05 0.023 0.046461 1 0.0021528 0.988 11p loss 71 (14%) 443 NA NA NA NA 1.364e-27 1.2e-24 1.5344e-10 1.16e-07 0.21825 1 0.37269 1 3.26e-12 2.56e-09 1.8062e-12 1.43e-09 1.7578e-11 1.36e-08 1.8933e-07 0.000128 0.00072783 0.357 5.8633e-07 0.000384 11q loss 68 (13%) 446 NA NA NA NA 1.2363e-24 1.08e-21 1.8113e-09 1.33e-06 0.77667 1 1 1 5.8085e-11 4.44e-08 8.6172e-11 6.57e-08 9.1226e-12 7.12e-09 6.4199e-07 0.000419 0.00020739 0.109 2.3228e-09 1.7e-06 12p loss 42 (8%) 472 0.1372 1 0.019423 1 7.8794e-18 6.59e-15 0.00011056 0.0596 0.035487 1 0.10551 1 2.4503e-10 1.85e-07 3.5094e-06 0.00216 2.7699e-07 0.000185 5.5803e-05 0.031 0.00060821 0.301 0.00076424 0.37 12q loss 35 (7%) 479 NA NA NA NA 6.2533e-14 5e-11 1.7137e-05 0.01 0.10112 1 0.042933 1 4.2021e-10 3.14e-07 7.7315e-07 0.000499 6.3801e-05 0.0352 5.864e-06 0.00351 0.00059631 0.296 0.00019797 0.104 13q loss 86 (17%) 428 0.90247 1 0.66714 1 1.6209e-26 1.42e-23 2.9231e-06 0.00182 0.049171 1 0.14175 1 1.8464e-08 1.31e-05 6.1625e-10 4.57e-07 5.1488e-08 3.58e-05 1.0501e-06 0.000674 0.056427 1 0.019954 1 14q loss 59 (11%) 455 0.0020193 0.938 0.00021801 0.114 4.6868e-23 4.06e-20 1.6852e-11 1.31e-08 0.027325 1 0.0021561 0.988 2.2958e-16 1.91e-13 1.3358e-12 1.06e-09 5.03e-09 3.65e-06 3.6577e-13 2.9e-10 1.6595e-05 0.00974 3.6367e-06 0.00223 15q loss 102 (20%) 412 0.0005666 0.282 4.1747e-05 0.0235 1.4081e-40 1.26e-37 9.2817e-15 7.52e-12 0.00035986 0.183 0.21183 1 6.1839e-24 5.38e-21 4.9153e-22 4.25e-19 2.4297e-20 2.08e-17 2.3125e-15 1.9e-12 1.6263e-07 0.000111 1.4408e-09 1.06e-06 16p loss 93 (18%) 421 0.0020193 0.938 0.00021801 0.114 8.7492e-36 7.76e-33 2.5469e-13 2.02e-10 0.071341 1 0.15707 1 4.3929e-20 3.76e-17 7.9409e-17 6.61e-14 1.9831e-14 1.6e-11 4.7049e-11 3.6e-08 2.8009e-05 0.016 2.3009e-07 0.000155 16q loss 134 (26%) 380 0.00077129 0.373 9.7998e-05 0.0533 1.9373e-46 1.73e-43 4.2007e-14 3.36e-11 0.30805 1 1 1 2.5056e-24 2.19e-21 3.2734e-19 2.78e-16 8.72e-19 7.37e-16 1.8309e-11 1.42e-08 1.674e-06 0.00106 7.9079e-09 5.69e-06 17p loss 120 (23%) 394 0.0032363 1 0.0004537 0.229 1.4857e-58 1.33e-55 1.1316e-15 9.35e-13 0.0027417 1 0.82698 1 3.3289e-26 2.92e-23 3.0433e-19 2.59e-16 3.951e-21 3.4e-18 1.7854e-10 1.35e-07 0.00057743 0.287 3.8205e-06 0.00233 17q loss 86 (17%) 428 0.0020193 0.938 0.00021801 0.114 3.2036e-37 2.85e-34 1.1589e-07 7.93e-05 0.092362 1 0.61178 1 3.3259e-15 2.71e-12 6.485e-10 4.81e-07 1.6363e-10 1.24e-07 6.4702e-06 0.00386 0.017543 1 0.003454 1 18p loss 52 (10%) 462 NA NA NA NA 6.3893e-18 5.35e-15 2.3913e-07 0.000161 0.41687 1 1 1 1.3014e-05 0.00769 5.5849e-06 0.00335 4.5561e-06 0.00276 7.2764e-05 0.0399 0.0031282 1 0.0054858 1 18q loss 65 (13%) 449 0.53641 1 0.27248 1 4.6574e-24 4.06e-21 1.6952e-08 1.2e-05 0.62662 1 1 1 1.1169e-07 7.65e-05 6.55e-10 4.85e-07 1.717e-07 0.000117 2.0894e-07 0.000141 0.0024398 1 0.0033139 1 19p loss 57 (11%) 457 NA NA NA NA 2.349e-19 2e-16 1.3708e-12 1.08e-09 0.052334 1 0.39315 1 2.0895e-09 1.53e-06 1.4219e-10 1.08e-07 1.3672e-09 1.01e-06 4.3826e-07 0.000291 1.9658e-05 0.0114 5.3042e-08 3.68e-05 19q loss 52 (10%) 462 0.2533 1 0.09018 1 4.4202e-16 3.66e-13 4.8899e-07 0.000323 0.15859 1 0.56032 1 7.1156e-07 0.000462 5.7648e-08 3.99e-05 1.6389e-06 0.00104 1.7995e-05 0.0105 0.0024735 1 4.9174e-05 0.0274 20p loss 18 (4%) 496 NA NA NA NA 6.2703e-05 0.0347 0.1985 1 0.73455 1 0.067488 1 0.097003 1 0.031331 1 0.20335 1 0.010214 1 0.51188 1 0.2324 1 20q loss 10 (2%) 504 NA NA NA NA 7.6059e-05 0.0417 0.036776 1 0.58638 1 0.63255 1 0.098766 1 0.063682 1 0.26729 1 0.0034154 1 0.21877 1 0.070034 1 21q loss 51 (10%) 463 0.039088 1 0.0046615 1 3.6198e-14 2.91e-11 2.1188e-06 0.00133 0.20738 1 0.24316 1 5.3372e-10 3.98e-07 1.6668e-08 1.18e-05 2.5932e-08 1.83e-05 5.8632e-08 4.05e-05 1.1138e-06 0.000714 2.1652e-07 0.000146 22q loss 105 (20%) 409 0.0020193 0.938 0.00021801 0.114 4.4124e-44 3.94e-41 2.7391e-10 2.06e-07 0.044305 1 0.81277 1 3.3463e-18 2.81e-15 2.1815e-16 1.81e-13 3.3821e-16 2.8e-13 8.3775e-09 6.02e-06 0.011144 1 2.1281e-05 0.0123 xq loss 69 (13%) 445 0.0080894 1 0.0010465 0.499 7.3202e-28 6.46e-25 2.262e-07 0.000152 2.7124e-05 0.0155 0.059021 1 2.3587e-14 1.9e-11 2.4626e-12 1.94e-09 2.7769e-11 2.14e-08 4.02e-08 2.81e-05 0.00052707 0.264 3.729e-06 0.00229