index	chromosome	region_start	region_end	peak_start	peak_end	enlarged_peak_start	enlarged_peak_end	n_genes_in_region	genes_in_region	n_genes_in_peak	genes_in_peak	n_genes_on_chip	genes_on_chip	top 3
1	1	149881398	179136680	161041735	161066590	161004307	161098482	8	NIT1,PFDN2,USF1,DEDD,PVRL4,KLHDC9,ARHGAP30,TSTD1,	4	PFDN2,PVRL4,KLHDC9,ARHGAP30,	
2	1	38637698	43073464	40377907	40377907	39531714	40975260	25	BMP8B,COL9A2,MYCL1,PPT1,RLF,PABPC4,ZMPSTE24,PPIE,CAP1,MACF1,HEYL,HPCAL4,TRIT1,OXCT2,SMAP2,DEM1,ZNF643,NT5C1A,MFSD2A,TMCO2,ZNF642,BMP8A,KIAA0754,SNORA55,PPIEL,	0	[MYCL1]	
3	1	149881398	179136680	151993500	151993500	120527361	152976474	185	hsa-mir-554,hsa-mir-4257,hsa-mir-3118-3,hsa-mir-3118-2,hsa-mir-3118-1,ARNT,BCL9,CTSK,CTSS,ECM1,ENSA,FCGR1A,FCGR1B,FLG,FMO5,GJA5,GJA8,IVL,MCL1,SMCP,NOTCH2,PDZK1,PI4KB,PRKAB2,PSMB4,PSMD4,RFX5,RORC,S100A10,S100A11,SPRR1A,SPRR3,VPS72,TCHH,TUFT1,HIST2H2AA3,HIST2H2AC,HIST2H2BE,HIST2H4A,PIP5K1A,ANXA9,ITGA10,PEX11B,SELENBP1,PRPF3,SEC22B,CHD1L,PDE4DIP,SETDB1,SV2A,RBM8A,SF3B4,PIAS3,SEMA6C,POLR3C,TXNIP,MTMR11,MLLT11,TDRKH,CD160,CELF3,VPS45,POGZ,RPRD2,CA14,NBPF14,LCE2B,RNF115,TMOD4,CERS2,CRNN,BOLA1,APH1A,PLEKHO1,ACP6,GPR89B,OAZ3,MRPS21,ADAMTSL4,CRCT1,C1orf56,GOLPH3L,FAM63A,CDC42SE1,OTUD7B,FAM91A2,CGN,ZNF687,PRUNE,MRPL9,SCNM1,TNFAIP8L2,C1orf54,TARS2,SNX27,ANP32E,HORMAD1,POLR3GL,LCE3D,GNRHR2,THEM4,GABPB2,TCHHL1,RPTN,HIST2H3C,LIX1L,C1orf51,HFE2,ANKRD35,BNIPL,SPRR4,PPIAL4A,PDIA3P,LCE4A,NBPF11,NUDT17,LCE5A,RIIAD1,THEM5,NBPF15,ANKRD34A,HIST2H2AB,HIST2H3A,HIST2H2BC,HIST2H2BA,LINGO4,LCE1A,LCE1B,LCE1C,LCE1D,LCE1E,LCE1F,LCE2A,LCE2C,LCE2D,LCE3A,LCE3B,LCE3C,LCE3E,LOC375010,NOTCH2NL,FLJ39739,LOC388692,LYSMD1,HRNR,FLG2,NBPF9,HIST2H2BF,KPRP,LCE6A,HIST2H4B,PPIAL4G,PPIAL4D,LOC645166,EMBP1,SRGAP2P2,PPIAL4B,LOC653513,GPR89A,PPIAL4C,HIST2H3D,FAM72B,MIR554,HIST2H2AA4,FAM72D,LOC728855,LOC728875,NBPF24,GPR89C,NBPF16,PDZK1P1,PPIAL4F,LOC728989,PPIAL4E,PFN1P2,C1orf68,LOC100130000,LOC100132111,NBPF10,FCGR1C,C2CD4D,LOC100286793,LOC100289211,MIR4257,TNFAIP8L2-SCNM1,	0	[S100A11]	
4	3	2212571	22388374	12484849	12485147	12483451	12485886	0	[PPARG]	0	[PPARG]	
5	3	176449856	186567070	178747899	178800509	160810203	197538677	238	hsa-mir-922,hsa-mir-570,hsa-mir-3137,hsa-mir-944,hsa-mir-28,hsa-mir-1248,hsa-mir-1224,hsa-mir-569,hsa-mir-551b,hsa-mir-720,hsa-mir-1263,ACTL6A,AHSG,APOD,BCHE,BCL6,BDH1,AP2M1,CLCN2,CPN2,CRYGS,DGKG,DLG1,DVL3,ECT2,EHHADH,EIF4A2,EIF4G1,EPHB3,ETV5,MECOM,FGF12,GHSR,GP5,HRG,HES1,IL1RAP,KNG1,LPP,MFI2,MUC4,NDUFB5,OPA1,CLDN11,PAK2,PCYT1A,SERPINI1,SERPINI2,PIK3CA,PLD1,POLR2H,PPP1R2,PRKCI,MASP1,PSMD2,RFC4,SNORA63,RPL35A,TRA2B,SI,ST6GAL1,SKIL,SLC2A2,SOX2,SST,TERC,TFRC,THPO,SEC62,FXR1,TP63,CHRD,B3GALNT1,TNFSF10,EIF2B5,USP13,CLDN1,MAP3K13,ADIPOQ,KIAA0226,ECE2,ABCC5,TNK2,ALG3,KCNMB2,IGF2BP2,CLDN16,PDCD10,SLITRK3,NLGN1,NCBP2,TNIK,MCF2L2,ATP11B,VPS8,ACAP2,UBXN7,GPR160,FETUB,LAMP3,KCNMB3,GOLIM4,NMD3,ZNF639,PEX5L,DNAJB11,DCUN1D1,KLHL24,PIGX,TBCCD1,LEPREL1,ABCF3,LSG1,PARL,MFN1,YEATS2,MYNN,EIF5A2,MCCC1,HRASLS,MRPL47,NCEH1,SLC7A14,SENP2,GNB4,RTP4,MAGEF1,ZMAT3,FNDC3B,ATP13A3,TBL1XR1,ZBBX,LRRC31,MAP6D1,PHC3,PIGZ,SPATA16,B3GNT5,IQCG,ATP13A4,FYTTD1,ARPM1,MGC2889,LRCH3,CEP19,LMLN,KLHL6,VWA5B2,TMEM41A,TMEM44,EGFEM1P,CAMK2N2,TM4SF19,RPL39L,DNAJC19,OTOL1,FAM131A,ZDHHC19,LRRC15,FAM43A,TMEM207,RTP1,TTC14,WDR49,LRRC34,MB21D2,XXYLT1,CCDC50,PYDC2,LOC152217,SPTSSB,RNF168,HTR3C,LIPH,HTR3D,RPL22L1,OSTalpha,FBXO45,MUC20,SENP5,LOC220729,LOC253573,NAALADL2,TCTEX1D2,C3orf43,SDHAP1,UTS2D,HTR3E,C3orf70,TPRG1,CCDC39,LOC339926,LPP-AS2,LRRIQ4,SAMD7,LOC344887,RTP2,OSTN,ATP13A5,SOX2-OT,WDR53,ANKRD18DP,LRRC33,TMEM212,FLJ46066,FLJ42393,FLJ34208,LOC401109,SNORD2,SNORA4,LOC646168,C3orf65,LOC647107,GMNC,LOC647323,SNORA81,SNORD66,MIR551B,MIR569,MIR570,SDHAP2,FAM157A,MIR922,MIR944,LOC100128023,LOC100128164,LOC100131551,LOC100131635,SNAR-I,MIR1224,MIR1248,LOC100505687,MFI2-AS1,LOC100507086,LOC100507391,TM4SF19-TCTEX1D2,MIR4797,MIR4789,	1	ZMAT3,	
6	4	1648452	2172567	1752567	1804276	1738732	1816690	3	FGFR3,LETM1,TACC3,	2	FGFR3,LETM1,	
7	4	72447421	74855795	73234042	73279209	72387348	74853903	16	AFM,AFP,ALB,GC,CXCL1,IL8,PF4,PF4V1,PPBP,CXCL6,SLC4A4,ADAMTS3,NPFFR2,ANKRD17,RASSF6,COX18,	1	ADAMTS3,	
8	5	914233	15332578	1287540	1287540	914233	2800743	36	hsa-mir-4277,NDUFS6,SDHA,SLC6A3,SLC9A3,TERT,TRIP13,PDCD6,SLC12A7,TPPP,EXOC3,PP7080,IRX4,CEP72,AHRR,MRPL36,BRD9,ZDHHC11,LPCAT1,CLPTM1L,NKD2,C5orf55,CCDC127,PLEKHG4B,C5orf38,IRX2,SLC6A19,SLC6A18,LRRC14B,SDHAP3,LOC728613,MIR4277,LOC100506688,MIR4457,MIR4456,MIR4635,	6	TERT,SLC12A7,NKD2,SLC6A19,SLC6A18,MIR4635,	
9	6	4700684	27710526	21166588	21168368	21085468	21451804	1	CDKAL1,	1	CDKAL1,	
10	6	106657195	107549331	107310106	107335307	107215913	107451531	4	hsa-mir-587,C6orf203,BEND3,LOC100422737,	0	[C6orf203]	
11	7	52222330	57923947	55090379	55090852	54753353	55428178	2	EGFR,SEC61G,	1	EGFR,	
12	7	13715838	22564290	17059174	17059174	16814353	18474732	8	hsa-mir-1302-6,AHR,HDAC9,AGR2,SNX13,TSPAN13,AGR3,PRPS1L1,	1	AHR,	
13	8	85099995	145232496	101861829	101883378	101243262	102457921	10	SPAG1,YWHAZ,RNF19A,PABPC1,ZNF706,NACAP1,ANKRD46,SNX31,FLJ42969,MIR4471,	0	[YWHAZ]	
14	8	36031255	40760249	37547777	37547777	37454800	37582304	1	ZNF703,	0	[ZNF703]	
15	9	5087087	5925878	5087087	5916465	789932	11012115	48	hsa-mir-101-2,hsa-mir-1302-9,DMRT1,FOXD4,MLANA,GLDC,INSL4,JAK2,PTPRD,RFX3,RLN1,RLN2,SLC1A1,SMARCA2,VLDLR,KIAA0020,RCL1,DMRT2,INSL6,KDM4C,KANK1,RANBP6,CD274,AK3,C9orf68,CDC37L1,C9orf46,CBWD1,KIAA1432,DMRT3,ERMP1,PDCD1LG2,DOCK8,GLIS3-AS1,TPD52L3,IL33,C9orf123,UHRF2,C9orf66,KIAA2026,KCNV2,GLIS3,FLJ35024,PPAPDC2,MIR101-2,FAM138C,WASH1,MIR4665,	11	MLANA,INSL4,JAK2,RLN1,RLN2,INSL6,CD274,C9orf46,KIAA1432,ERMP1,PDCD1LG2,	
16	10	415240	14839071	8998002	9010379	6935298	9578574	8	ATP5C1,GATA3,ITIH2,KIN,SFMBT2,ITIH5,TAF3,FLJ45983,	0	[GATA3]	
17	11	66272237	81947713	69474526	69493271	69465157	69502929	2	CCND1,ORAOV1,	2	CCND1,ORAOV1,	
18	11	100657318	103464952	102301960	102356081	101984747	102673248	11	BIRC2,BIRC3,MMP1,MMP7,MMP8,MMP10,MMP20,YAP1,MMP27,TMEM123,LOC100288077,	1	TMEM123,	
19	12	65294299	73655363	69339043	69513675	69198112	69569846	2	CPM,MDM2,	1	CPM,	
20	12	3539259	3655672	3539259	3642795	889902	8698954	132	hsa-mir-141,APOBEC1,C1R,C1S,C3AR1,CACNA1C,CCND2,CD4,CD9,CD27,CHD4,ATN1,ENO2,FGF6,FKBP4,FOXM1,GAPDH,GNB3,KCNA1,KCNA5,KCNA6,LAG3,LTBR,NDUFA9,NINJ2,NOP2,NTF3,PTMS,PTPN6,PEX5,RAD52,KDM5A,SCNN1A,SLC2A3,SLC6A12,SLC6A13,VAMP1,TEAD4,TNFRSF1A,TPI1,TULP3,VWF,FGF23,USP5,MLF2,DYRK4,CD163,GDF3,CLSTN3,NCAPD2,LPCAT3,LRRC23,EMG1,LEPREL2,AKAP3,RAD51AP1,TSPAN9,PHB2,ERC1,IFFO1,NECAP1,CLEC4E,GALNT8,GPR162,COPS7A,CLEC4A,ING4,MRPL51,C1RL,TAPBPL,FAM90A1,PLEKHG6,FOXJ2,ITFG2,PRMT8,PARP11,ANO2,C12orf4,C12orf5,LPAR5,WNK1,ADIPOR2,NANOG,WNT5B,CDCA3,C12orf32,NRIP2,RBP5,CCDC77,ACRBP,SPSB2,EFCAB4B,CACNA2D4,CLEC6A,C12orf57,SLC2A14,FBXL14,CLEC4C,ZNF384,DSTNP2,C12orf53,DCP1B,MATL2963,CD163L1,RPL13P5,B4GALNT3,LOC283440,CLEC4D,ACSM4,DPPA3,NANOGNB,LOC389634,MIR141,MIR200C,IQSEC3,ZNF705A,FAM66C,LOC574538,POU5F1P3,FAM86FP,LRTM2,SCARNA12,SCARNA11,FAM138D,LOC678655,SCARNA10,LOC100271702,LOC100288778,LOC100292680,MIR3649,LOC100507424,LOC100652846,	1	PRMT8,	
21	13	73639692	74271805	73903671	73992406	73652776	74155591	0	[KLF5]	0	[KLF5]	
22	14	23534166	24071531	23534166	23915942	23434765	24115433	29	hsa-mir-208b,BCL2L2,CEBPE,MYH6,MYH7,PSMB5,PABPN1,AP1G2,DHRS2,EFS,ACIN1,SLC7A8,NGDN,SLC22A17,C14orf119,HOMEZ,C14orf93,CDH24,IL25,THTPA,JPH4,AJUBA,ZFHX2,PPP1R3E,CMTM5,PSMB11,MIR208A,MIR208B,BCL2L2-PABPN1,	19	hsa-mir-208b,BCL2L2,CEBPE,MYH6,MYH7,PABPN1,EFS,ACIN1,SLC7A8,SLC22A17,C14orf119,HOMEZ,CDH24,IL25,PPP1R3E,CMTM5,MIR208A,MIR208B,BCL2L2-PABPN1,	
23	16	10492418	12854324	11880407	11916362	11273228	12092442	17	hsa-mir-548h-2,TNFRSF17,GSPT1,PRM1,PRM2,TNP2,SNN,SOCS1,LITAF,CLEC16A,RSL1D1,ZC3H7A,TXNDC11,PRM3,SNX29,RMI2,BCAR4,	2	ZC3H7A,BCAR4,	
24	16	69503266	69534688	69503266	69527569	65817433	78391263	180	hsa-mir-1972-2,hsa-mir-140,hsa-mir-1538,hsa-mir-328,AARS,AP1G1,AGRP,ZFHX3,CA7,CALB2,CBFB,CDH1,CDH3,CDH5,CDH16,CTRB1,CTRL,DHODH,NQO1,DYNC1LI2,E2F4,GLG1,HAS3,HP,HPR,HSD11B2,HSF4,KARS,LCAT,CHST6,NFATC3,PSKH1,PSMB10,PSMD7,RRAD,ST3GAL2,SLC9A5,SLC12A4,SNTB2,TAT,TERF2,TK2,ZNF19,ZNF23,TRADD,CES2,NAE1,NOL3,SLC7A6,ATP6V0D1,BCAR1,DHX38,IST1,CLEC3A,CHST4,NUTF2,CFDP1,CTCF,NFAT5,WWP2,DDX19B,GABARAPL2,MON1B,PHLPP2,SF3B3,CES3,ADAT1,CHST5,EDC4,PLA2G15,COG4,PLEKHG4,LRRC29,VPS4A,NOB1,TMEM208,FHOD1,ZDHHC1,PARD6A,CKLF,NIP7,FAM96B,TPPP3,WWOX,TERF2IP,PRMT7,HYDIN,DUS2L,CHTF8,TXNL4B,PDPR,RFWD3,LRRC36,DDX19A,FBXL8,SMPD3,ZNF821,VAC14,FTSJD1,DDX28,TSNAXIP1,THAP11,PDP2,RANBP10,VAT1L,PDF,DPEP2,DPEP3,ACD,FA2H,FAM65A,TMEM231,TMCO7,WDR59,ELMO3,ESRP2,CENPT,C16orf70,CYB5B,GFOD2,PMFBP1,C16orf48,SLC7A6OS,COG8,B3GNT9,CIRH1A,ZNRF1,CNTNAP4,MARVELD3,MTSS1L,CMTM1,EXOSC6,NRN1L,CMTM3,TMEM170A,ZFP90,RLTPR,KCTD19,CMTM4,CMTM2,BEAN1,IL34,TMED6,ZFP1,ADAMTS18,LDHD,FUK,MLKL,CCDC79,CES4A,EXOC3L1,HTA,LOC283922,NUDT7,PDXDC2P,CLEC18C,ATXN1L,PKD1L3,CLEC18A,C16orf86,MIR140,CTRB2,MIR328,CLEC18B,KIAA0895L,SNORD71,SNORD111,LOC729513,SNORD111B,LOC100130894,SYCE1L,MIR1538,MIR1972-1,SNORA70D,MIR1972-2,LOC100505865,LOC100506083,LOC100506172,CKLF-CMTM1,MIR4719,	1	CYB5B,	
25	17	37362533	38248022	37899688	37899688	37822311	37904211	7	ERBB2,GRB7,PNMT,TCAP,MIEN1,PGAP3,MIR4728,	1	GRB7,	
26	17	25270517	28868729	27688854	27688854	27388957	27859516	6	CRYBA1,TIAF1,NUFIP2,TAOK1,MYO18A,MIR4523,	0	[MIR4523]	
27	19	28249082	33659261	30479310	30519017	30148895	30531050	4	CCNE1,URI1,PLEKHF1,C19orf12,	1	URI1,	
28	19	53486060	57693084	56909686	56941022	52781493	58878226	283	hsa-mir-1274b,hsa-mir-935,hsa-mir-373,hsa-mir-1283-2,hsa-mir-643,A1BG,FCAR,FKBP1AP1,IL11,KIR2DL1,KIR2DL3,KIR2DL4,KIR2DS4,KIR3DL1,KIR3DL2,LAIR1,LAIR2,NDUFA3,CNOT3,PEG3,PRKCG,PTPRH,RPL28,RPS5,RPS9,AURKC,SYT5,TNNI3,TNNT1,ZNF8,ZNF17,ZNF28,MZF1,ZNF132,ZNF134,ZNF135,ZNF137P,ZNF154,UBE2M,ZNF264,NCR1,TRIM28,ZNF256,LILRB2,ZNF211,TRAPPC2P1,ZNF274,ZNF460,LILRB1,LILRB5,SLC27A5,LILRB4,LILRA1,LILRB3,LILRA3,LILRA2,U2AF2,PPP6R1,LILRA4,ZIM2,HSPBP1,ZNF324,PRPF31,CHMP2A,ZNF544,UBE2S,TFPT,CCDC106,EPN1,ZNF580,GP6,ZNF581,PPP1R12C,ZNF586,EPS8L1,ZNF444,ZNF331,NLRP2,ZNF416,ZNF446,ZNF701,ZNF83,ZNF415,NAT14,VN1R1,ZNF304,TTYH1,ZNF471,USP29,ZNF71,CACNG8,CACNG7,CACNG6,ZNF667,ZSCAN18,MGC2752,TSEN34,MBOAT7,ZSCAN5A,LENG1,LILRP2,LILRA6,ZNF329,ZNF419,ISOC2,ZNF665,ZNF552,ZNF671,ZNF702P,ZNF606,ZNF611,ZNF528,BRSK1,ZNF347,SUV420H2,ZBTB45,ZNF587,FIZ1,GALP,ZNF628,KIR3DX1,ZNF551,ZNF766,ZNF468,ZNF160,ZNF835,ZNF765,NLRP12,MYADM,ZNF845,LENG9,BIRC8,RDH13,ZIM3,LENG8,KIR3DL3,ZNF837,ZNF816,ZNF543,COX6B2,OSCAR,ZNF813,NLRP13,NLRP8,NLRP5,ZNF787,ZFP28,ZNF480,ZNF534,ZNF578,ERVV-1,LOC147670,C19orf18,ZNF418,ZNF417,ZNF548,TMEM190,TMC4,LOC147804,ZNF524,ZNF784,NLRP4,ZNF542,ZNF582,ZNF583,CDC42EP5,ZNF610,ZNF600,ZNF320,ZNF497,ZNF550,ZNF579,ZNF525,NLRP7,ZNF584,ZSCAN4,NLRP11,TMEM86B,ZNF549,SSC5D,ZNF547,ZIK1,ZNF776,ZSCAN1,LOC284379,VSTM1,TMEM150B,FAM71E2,VN1R2,VN1R4,NLRP9,ZNF677,RFPL4A,ZSCAN5B,ZSCAN22,ZNF530,C19orf51,LILRA5,ZNF773,LOC386758,ZNF808,ZNF761,TMEM238,ZNF470,ZNF749,ZNF324B,ZNF805,ZNF321P,ZNF880,ZNF772,TARM1,MIR371A,MIR372,MIR373,A1BG-AS1,DPRX,DUXA,MIR512-1,MIR512-2,MIR498,MIR520E,MIR515-1,MIR519E,MIR520F,MIR515-2,MIR519C,MIR520A,MIR526B,MIR519B,MIR525,MIR523,MIR518F,MIR520B,MIR518B,MIR526A1,MIR520C,MIR518C,MIR524,MIR517A,MIR519D,MIR521-2,MIR520D,MIR517B,MIR520G,MIR516B2,MIR526A2,MIR518E,MIR518A1,MIR518D,MIR516B1,MIR518A2,MIR517C,MIR520H,MIR521-1,MIR522,MIR519A1,MIR527,MIR516A1,MIR516A2,MIR519A2,LOC646508,SBK2,LOC646862,MIR643,SHISA7,ZNF814,MIMT1,MIR935,LOC100128252,LOC100128398,SGK110,LOC100131691,PEG3-AS1,ERVV-2,ZNF587B,MIR1283-2,MIR1323,MIR1283-1,ZNF865,ZNF816-ZNF321P,MIR4754,MIR4752,MIR371B,	2	ZNF583,LOC386758,	
29	20	29843973	33529260	30171850	30270772	30072986	30330306	10	hsa-mir-3193,BCL2L1,ID1,TPX2,REM1,HM13,COX4I2,LINC00028,PSIMCT-1,MIR3193,	5	hsa-mir-3193,BCL2L1,ID1,COX4I2,MIR3193,	
30	22	25208356	26821186	25404325	25419611	22103423	27257382	81	hsa-mir-548j,hsa-mir-650,ADORA2A,ADRBK2,BCR,CRYBA4,CRYBB1,CRYBB2,CRYBB2P1,CRYBB3,DDT,GGT1,GGT5,GNAZ,GSTT1,GSTT2,IGLL1,MIF,MMP11,MAPK1,SMARCB1,SNRPD3,TOP1P2,VPREB1,ZNF70,TPST2,TOP3B,RAB36,PPM1F,SPECC1L,CABIN1,PRAME,SEZ6L,TFIP11,GSTTP1,POM121L1P,FBXW4P1,RTDR1,POM121L9P,VPREB3,C22orf43,UPB1,SUSD2,ASPHD2,SLC2A11,C22orf13,MYO18B,KIAA1671,HPS4,GGTLC2,GUSBP11,DERL3,IGLL3P,LRP5L,LOC96610,ZNF280A,SGSM1,ZNF280B,ZDHHC8P1,C22orf15,TMEM211,RGL4,LOC284889,FAM211B,LOC391322,CHCHD10,SRRD,PIWIL3,MIAT,BCRP3,C22orf45,POM121L10P,LOC648691,CES5AP1,GSTTP2,GSTT2B,MIR650,DDTL,LOC100128531,MIR548J,IGLL5,	0	[KIAA1671]	
