
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/13/Correlate_Genomic_Events.R")
> result <- main("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/13/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-tTRUE", "-iD=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/ESCA-TP/8282846/transformed.cor.cli.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/ESCA-TP/8282693/ESCA-TP.transferedmergedcluster.txt", "-fF=", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=0.05", "-cQ=0.25", "-MF=ONLYSIG", "-oT=ESCA-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=ESCA-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/ESCA-TP/8282693/ESCA-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/ESCA-TP/8282846/transformed.cor.cli.txt"

nPatients in clinical file=126, in cluster file=103, common to both=103
[1]  80 103
[1] "1P GAIN MUTATION ANALYSIS"
[1] 3
  1P GAIN MUTATED 1P GAIN WILD-TYPE 
               17                86 
  1P GAIN MUTATED 1P GAIN WILD-TYPE 
               17                86 
[1] "1Q GAIN MUTATION ANALYSIS"
[1] 3
  1Q GAIN MUTATED 1Q GAIN WILD-TYPE 
               32                71 
  1Q GAIN MUTATED 1Q GAIN WILD-TYPE 
               32                71 
[1] "2P GAIN MUTATION ANALYSIS"
[1] 3
  2P GAIN MUTATED 2P GAIN WILD-TYPE 
               40                63 
  2P GAIN MUTATED 2P GAIN WILD-TYPE 
               40                63 
[1] "2Q GAIN MUTATION ANALYSIS"
[1] 3
  2Q GAIN MUTATED 2Q GAIN WILD-TYPE 
               30                73 
  2Q GAIN MUTATED 2Q GAIN WILD-TYPE 
               30                73 
[1] "3P GAIN MUTATION ANALYSIS"
[1] 3
  3P GAIN MUTATED 3P GAIN WILD-TYPE 
               14                89 
  3P GAIN MUTATED 3P GAIN WILD-TYPE 
               14                89 
[1] "3Q GAIN MUTATION ANALYSIS"
[1] 3
  3Q GAIN MUTATED 3Q GAIN WILD-TYPE 
               39                64 
  3Q GAIN MUTATED 3Q GAIN WILD-TYPE 
               39                64 
[1] "4P GAIN MUTATION ANALYSIS"
[1] 3
  4P GAIN MUTATED 4P GAIN WILD-TYPE 
               10                93 
  4P GAIN MUTATED 4P GAIN WILD-TYPE 
               10                93 
[1] "4Q GAIN MUTATION ANALYSIS"
[1] 3
  4Q GAIN MUTATED 4Q GAIN WILD-TYPE 
                9                94 
  4Q GAIN MUTATED 4Q GAIN WILD-TYPE 
                9                94 
[1] "5P GAIN MUTATION ANALYSIS"
[1] 3
  5P GAIN MUTATED 5P GAIN WILD-TYPE 
               45                58 
  5P GAIN MUTATED 5P GAIN WILD-TYPE 
               45                58 
[1] "5Q GAIN MUTATION ANALYSIS"
[1] 3
  5Q GAIN MUTATED 5Q GAIN WILD-TYPE 
               15                88 
  5Q GAIN MUTATED 5Q GAIN WILD-TYPE 
               15                88 
[1] "6P GAIN MUTATION ANALYSIS"
[1] 3
  6P GAIN MUTATED 6P GAIN WILD-TYPE 
               17                86 
  6P GAIN MUTATED 6P GAIN WILD-TYPE 
               17                86 
[1] "6Q GAIN MUTATION ANALYSIS"
[1] 3
  6Q GAIN MUTATED 6Q GAIN WILD-TYPE 
               16                87 
  6Q GAIN MUTATED 6Q GAIN WILD-TYPE 
               16                87 
[1] "7P GAIN MUTATION ANALYSIS"
[1] 3
  7P GAIN MUTATED 7P GAIN WILD-TYPE 
               62                41 
  7P GAIN MUTATED 7P GAIN WILD-TYPE 
               62                41 
[1] "7Q GAIN MUTATION ANALYSIS"
[1] 3
  7Q GAIN MUTATED 7Q GAIN WILD-TYPE 
               49                54 
  7Q GAIN MUTATED 7Q GAIN WILD-TYPE 
               49                54 
[1] "8P GAIN MUTATION ANALYSIS"
[1] 3
  8P GAIN MUTATED 8P GAIN WILD-TYPE 
               39                64 
  8P GAIN MUTATED 8P GAIN WILD-TYPE 
               39                64 
[1] "8Q GAIN MUTATION ANALYSIS"
[1] 3
  8Q GAIN MUTATED 8Q GAIN WILD-TYPE 
               56                47 
  8Q GAIN MUTATED 8Q GAIN WILD-TYPE 
               56                47 
[1] "9P GAIN MUTATION ANALYSIS"
[1] 3
  9P GAIN MUTATED 9P GAIN WILD-TYPE 
               12                91 
  9P GAIN MUTATED 9P GAIN WILD-TYPE 
               12                91 
[1] "9Q GAIN MUTATION ANALYSIS"
[1] 3
  9Q GAIN MUTATED 9Q GAIN WILD-TYPE 
               23                80 
  9Q GAIN MUTATED 9Q GAIN WILD-TYPE 
               23                80 
[1] "10P GAIN MUTATION ANALYSIS"
[1] 3
  10P GAIN MUTATED 10P GAIN WILD-TYPE 
                21                 82 
  10P GAIN MUTATED 10P GAIN WILD-TYPE 
                21                 82 
[1] "10Q GAIN MUTATION ANALYSIS"
[1] 3
  10Q GAIN MUTATED 10Q GAIN WILD-TYPE 
                16                 87 
  10Q GAIN MUTATED 10Q GAIN WILD-TYPE 
                16                 87 
[1] "11P GAIN MUTATION ANALYSIS"
[1] 3
  11P GAIN MUTATED 11P GAIN WILD-TYPE 
                20                 83 
  11P GAIN MUTATED 11P GAIN WILD-TYPE 
                20                 83 
[1] "11Q GAIN MUTATION ANALYSIS"
[1] 3
  11Q GAIN MUTATED 11Q GAIN WILD-TYPE 
                19                 84 
  11Q GAIN MUTATED 11Q GAIN WILD-TYPE 
                19                 84 
[1] "12P GAIN MUTATION ANALYSIS"
[1] 3
  12P GAIN MUTATED 12P GAIN WILD-TYPE 
                36                 67 
  12P GAIN MUTATED 12P GAIN WILD-TYPE 
                36                 67 
[1] "12Q GAIN MUTATION ANALYSIS"
[1] 3
  12Q GAIN MUTATED 12Q GAIN WILD-TYPE 
                21                 82 
  12Q GAIN MUTATED 12Q GAIN WILD-TYPE 
                21                 82 
[1] "13Q GAIN MUTATION ANALYSIS"
[1] 3
  13Q GAIN MUTATED 13Q GAIN WILD-TYPE 
                24                 79 
  13Q GAIN MUTATED 13Q GAIN WILD-TYPE 
                24                 79 
[1] "14Q GAIN MUTATION ANALYSIS"
[1] 3
  14Q GAIN MUTATED 14Q GAIN WILD-TYPE 
                26                 77 
  14Q GAIN MUTATED 14Q GAIN WILD-TYPE 
                26                 77 
[1] "15Q GAIN MUTATION ANALYSIS"
[1] 3
  15Q GAIN MUTATED 15Q GAIN WILD-TYPE 
                19                 84 
  15Q GAIN MUTATED 15Q GAIN WILD-TYPE 
                19                 84 
[1] "16P GAIN MUTATION ANALYSIS"
[1] 3
  16P GAIN MUTATED 16P GAIN WILD-TYPE 
                20                 83 
  16P GAIN MUTATED 16P GAIN WILD-TYPE 
                20                 83 
[1] "16Q GAIN MUTATION ANALYSIS"
[1] 3
  16Q GAIN MUTATED 16Q GAIN WILD-TYPE 
                16                 87 
  16Q GAIN MUTATED 16Q GAIN WILD-TYPE 
                16                 87 
[1] "17P GAIN MUTATION ANALYSIS"
[1] 3
  17P GAIN MUTATED 17P GAIN WILD-TYPE 
                19                 84 
  17P GAIN MUTATED 17P GAIN WILD-TYPE 
                19                 84 
[1] "17Q GAIN MUTATION ANALYSIS"
[1] 3
  17Q GAIN MUTATED 17Q GAIN WILD-TYPE 
                24                 79 
  17Q GAIN MUTATED 17Q GAIN WILD-TYPE 
                24                 79 
[1] "18P GAIN MUTATION ANALYSIS"
[1] 3
  18P GAIN MUTATED 18P GAIN WILD-TYPE 
                28                 75 
  18P GAIN MUTATED 18P GAIN WILD-TYPE 
                28                 75 
[1] "18Q GAIN MUTATION ANALYSIS"
[1] 3
  18Q GAIN MUTATED 18Q GAIN WILD-TYPE 
                14                 89 
  18Q GAIN MUTATED 18Q GAIN WILD-TYPE 
                14                 89 
[1] "19P GAIN MUTATION ANALYSIS"
[1] 3
  19P GAIN MUTATED 19P GAIN WILD-TYPE 
                15                 88 
  19P GAIN MUTATED 19P GAIN WILD-TYPE 
                15                 88 
[1] "19Q GAIN MUTATION ANALYSIS"
[1] 3
  19Q GAIN MUTATED 19Q GAIN WILD-TYPE 
                19                 84 
  19Q GAIN MUTATED 19Q GAIN WILD-TYPE 
                19                 84 
[1] "20P GAIN MUTATION ANALYSIS"
[1] 3
  20P GAIN MUTATED 20P GAIN WILD-TYPE 
                53                 50 
  20P GAIN MUTATED 20P GAIN WILD-TYPE 
                53                 50 
[1] "20Q GAIN MUTATION ANALYSIS"
[1] 3
  20Q GAIN MUTATED 20Q GAIN WILD-TYPE 
                60                 43 
  20Q GAIN MUTATED 20Q GAIN WILD-TYPE 
                60                 43 
[1] "21Q GAIN MUTATION ANALYSIS"
[1] 3
  21Q GAIN MUTATED 21Q GAIN WILD-TYPE 
                 8                 95 
  21Q GAIN MUTATED 21Q GAIN WILD-TYPE 
                 8                 95 
[1] "22Q GAIN MUTATION ANALYSIS"
[1] 3
  22Q GAIN MUTATED 22Q GAIN WILD-TYPE 
                19                 84 
  22Q GAIN MUTATED 22Q GAIN WILD-TYPE 
                19                 84 
[1] "XQ GAIN MUTATION ANALYSIS"
[1] 3
  XQ GAIN MUTATED XQ GAIN WILD-TYPE 
               21                82 
  XQ GAIN MUTATED XQ GAIN WILD-TYPE 
               21                82 
[1] "1P LOSS MUTATION ANALYSIS"
[1] 3
  1P LOSS MUTATED 1P LOSS WILD-TYPE 
               19                84 
  1P LOSS MUTATED 1P LOSS WILD-TYPE 
               19                84 
[1] "1Q LOSS MUTATION ANALYSIS"
[1] 3
  1Q LOSS MUTATED 1Q LOSS WILD-TYPE 
               13                90 
  1Q LOSS MUTATED 1Q LOSS WILD-TYPE 
               13                90 
[1] "2P LOSS MUTATION ANALYSIS"
[1] 3
  2P LOSS MUTATED 2P LOSS WILD-TYPE 
                5                98 
  2P LOSS MUTATED 2P LOSS WILD-TYPE 
                5                98 
[1] "2Q LOSS MUTATION ANALYSIS"
[1] 3
  2Q LOSS MUTATED 2Q LOSS WILD-TYPE 
               11                92 
  2Q LOSS MUTATED 2Q LOSS WILD-TYPE 
               11                92 
[1] "3P LOSS MUTATION ANALYSIS"
[1] 3
  3P LOSS MUTATED 3P LOSS WILD-TYPE 
               53                50 
  3P LOSS MUTATED 3P LOSS WILD-TYPE 
               53                50 
[1] "3Q LOSS MUTATION ANALYSIS"
[1] 3
  3Q LOSS MUTATED 3Q LOSS WILD-TYPE 
               15                88 
  3Q LOSS MUTATED 3Q LOSS WILD-TYPE 
               15                88 
[1] "4P LOSS MUTATION ANALYSIS"
[1] 3
  4P LOSS MUTATED 4P LOSS WILD-TYPE 
               56                47 
  4P LOSS MUTATED 4P LOSS WILD-TYPE 
               56                47 
[1] "4Q LOSS MUTATION ANALYSIS"
[1] 3
  4Q LOSS MUTATED 4Q LOSS WILD-TYPE 
               49                54 
  4Q LOSS MUTATED 4Q LOSS WILD-TYPE 
               49                54 
[1] "5P LOSS MUTATION ANALYSIS"
[1] 3
  5P LOSS MUTATED 5P LOSS WILD-TYPE 
               25                78 
  5P LOSS MUTATED 5P LOSS WILD-TYPE 
               25                78 
[1] "5Q LOSS MUTATION ANALYSIS"
[1] 3
  5Q LOSS MUTATED 5Q LOSS WILD-TYPE 
               42                61 
  5Q LOSS MUTATED 5Q LOSS WILD-TYPE 
               42                61 
[1] "6P LOSS MUTATION ANALYSIS"
[1] 3
  6P LOSS MUTATED 6P LOSS WILD-TYPE 
               20                83 
  6P LOSS MUTATED 6P LOSS WILD-TYPE 
               20                83 
[1] "6Q LOSS MUTATION ANALYSIS"
[1] 3
  6Q LOSS MUTATED 6Q LOSS WILD-TYPE 
               18                85 
  6Q LOSS MUTATED 6Q LOSS WILD-TYPE 
               18                85 
[1] "7P LOSS MUTATION ANALYSIS"
[1] 3
  7P LOSS MUTATED 7P LOSS WILD-TYPE 
                7                96 
  7P LOSS MUTATED 7P LOSS WILD-TYPE 
                7                96 
[1] "7Q LOSS MUTATION ANALYSIS"
[1] 3
  7Q LOSS MUTATED 7Q LOSS WILD-TYPE 
               12                91 
  7Q LOSS MUTATED 7Q LOSS WILD-TYPE 
               12                91 
[1] "8P LOSS MUTATION ANALYSIS"
[1] 3
  8P LOSS MUTATED 8P LOSS WILD-TYPE 
               33                70 
  8P LOSS MUTATED 8P LOSS WILD-TYPE 
               33                70 
[1] "8Q LOSS MUTATION ANALYSIS"
[1] 3
  8Q LOSS MUTATED 8Q LOSS WILD-TYPE 
               11                92 
  8Q LOSS MUTATED 8Q LOSS WILD-TYPE 
               11                92 
[1] "9P LOSS MUTATION ANALYSIS"
[1] 3
  9P LOSS MUTATED 9P LOSS WILD-TYPE 
               54                49 
  9P LOSS MUTATED 9P LOSS WILD-TYPE 
               54                49 
[1] "9Q LOSS MUTATION ANALYSIS"
[1] 3
  9Q LOSS MUTATED 9Q LOSS WILD-TYPE 
               33                70 
  9Q LOSS MUTATED 9Q LOSS WILD-TYPE 
               33                70 
[1] "10P LOSS MUTATION ANALYSIS"
[1] 3
  10P LOSS MUTATED 10P LOSS WILD-TYPE 
                26                 77 
  10P LOSS MUTATED 10P LOSS WILD-TYPE 
                26                 77 
[1] "10Q LOSS MUTATION ANALYSIS"
[1] 3
  10Q LOSS MUTATED 10Q LOSS WILD-TYPE 
                31                 72 
  10Q LOSS MUTATED 10Q LOSS WILD-TYPE 
                31                 72 
[1] "11P LOSS MUTATION ANALYSIS"
[1] 3
  11P LOSS MUTATED 11P LOSS WILD-TYPE 
                29                 74 
  11P LOSS MUTATED 11P LOSS WILD-TYPE 
                29                 74 
[1] "11Q LOSS MUTATION ANALYSIS"
[1] 3
  11Q LOSS MUTATED 11Q LOSS WILD-TYPE 
                32                 71 
  11Q LOSS MUTATED 11Q LOSS WILD-TYPE 
                32                 71 
[1] "12P LOSS MUTATION ANALYSIS"
[1] 3
  12P LOSS MUTATED 12P LOSS WILD-TYPE 
                18                 85 
  12P LOSS MUTATED 12P LOSS WILD-TYPE 
                18                 85 
[1] "12Q LOSS MUTATION ANALYSIS"
[1] 3
  12Q LOSS MUTATED 12Q LOSS WILD-TYPE 
                17                 86 
  12Q LOSS MUTATED 12Q LOSS WILD-TYPE 
                17                 86 
[1] "13Q LOSS MUTATION ANALYSIS"
[1] 3
  13Q LOSS MUTATED 13Q LOSS WILD-TYPE 
                41                 62 
  13Q LOSS MUTATED 13Q LOSS WILD-TYPE 
                41                 62 
[1] "14Q LOSS MUTATION ANALYSIS"
[1] 3
  14Q LOSS MUTATED 14Q LOSS WILD-TYPE 
                26                 77 
  14Q LOSS MUTATED 14Q LOSS WILD-TYPE 
                26                 77 
[1] "15Q LOSS MUTATION ANALYSIS"
[1] 3
  15Q LOSS MUTATED 15Q LOSS WILD-TYPE 
                25                 78 
  15Q LOSS MUTATED 15Q LOSS WILD-TYPE 
                25                 78 
[1] "16P LOSS MUTATION ANALYSIS"
[1] 3
  16P LOSS MUTATED 16P LOSS WILD-TYPE 
                27                 76 
  16P LOSS MUTATED 16P LOSS WILD-TYPE 
                27                 76 
[1] "16Q LOSS MUTATION ANALYSIS"
[1] 3
  16Q LOSS MUTATED 16Q LOSS WILD-TYPE 
                29                 74 
  16Q LOSS MUTATED 16Q LOSS WILD-TYPE 
                29                 74 
[1] "17P LOSS MUTATION ANALYSIS"
[1] 3
  17P LOSS MUTATED 17P LOSS WILD-TYPE 
                37                 66 
  17P LOSS MUTATED 17P LOSS WILD-TYPE 
                37                 66 
[1] "17Q LOSS MUTATION ANALYSIS"
[1] 3
  17Q LOSS MUTATED 17Q LOSS WILD-TYPE 
                10                 93 
  17Q LOSS MUTATED 17Q LOSS WILD-TYPE 
                10                 93 
[1] "18P LOSS MUTATION ANALYSIS"
[1] 3
  18P LOSS MUTATED 18P LOSS WILD-TYPE 
                36                 67 
  18P LOSS MUTATED 18P LOSS WILD-TYPE 
                36                 67 
[1] "18Q LOSS MUTATION ANALYSIS"
[1] 3
  18Q LOSS MUTATED 18Q LOSS WILD-TYPE 
                54                 49 
  18Q LOSS MUTATED 18Q LOSS WILD-TYPE 
                54                 49 
[1] "19P LOSS MUTATION ANALYSIS"
[1] 3
  19P LOSS MUTATED 19P LOSS WILD-TYPE 
                33                 70 
  19P LOSS MUTATED 19P LOSS WILD-TYPE 
                33                 70 
[1] "19Q LOSS MUTATION ANALYSIS"
[1] 3
  19Q LOSS MUTATED 19Q LOSS WILD-TYPE 
                27                 76 
  19Q LOSS MUTATED 19Q LOSS WILD-TYPE 
                27                 76 
[1] "20P LOSS MUTATION ANALYSIS"
[1] 3
  20P LOSS MUTATED 20P LOSS WILD-TYPE 
                14                 89 
  20P LOSS MUTATED 20P LOSS WILD-TYPE 
                14                 89 
[1] "20Q LOSS MUTATION ANALYSIS"
[1] 3
  20Q LOSS MUTATED 20Q LOSS WILD-TYPE 
                 5                 98 
  20Q LOSS MUTATED 20Q LOSS WILD-TYPE 
                 5                 98 
[1] "21Q LOSS MUTATION ANALYSIS"
[1] 3
  21Q LOSS MUTATED 21Q LOSS WILD-TYPE 
                58                 45 
  21Q LOSS MUTATED 21Q LOSS WILD-TYPE 
                58                 45 
[1] "22Q LOSS MUTATION ANALYSIS"
[1] 3
  22Q LOSS MUTATED 22Q LOSS WILD-TYPE 
                37                 66 
  22Q LOSS MUTATED 22Q LOSS WILD-TYPE 
                37                 66 
[1] "XQ LOSS MUTATION ANALYSIS"
[1] 3
  XQ LOSS MUTATED XQ LOSS WILD-TYPE 
               24                79 
  XQ LOSS MUTATED XQ LOSS WILD-TYPE 
               24                79 
[1] "terrence_modification_tag"
[1] TRUE
[1] "data2feature, selection="
[1] "CN_CNMF"                     "METHLYATION_CNMF"           
[3] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
[5] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[7] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 8 rows and 103 columns.

Variable 1:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'MRNASEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_MATURE_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
[1] "CN_CNMF"                     "METHLYATION_CNMF"           
[3] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
[5] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[7] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 103 columns, 0 survival variables, and 8 non-survival variables.
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = 1P GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P GAIN MUTATED        2      8      7
  1P GAIN WILD-TYPE     36     31     19
D1V1, multiclass
        clus
vv       1P GAIN MUTATED 1P GAIN WILD-TYPE
  CLUS_1               2                36
  CLUS_2               8                31
  CLUS_3               7                19
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P GAIN MUTATED        6      8      3
  1P GAIN WILD-TYPE     34     35     17
D1V2, multiclass
        clus
vv       1P GAIN MUTATED 1P GAIN WILD-TYPE
  CLUS_1               6                34
  CLUS_2               8                35
  CLUS_3               3                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1P GAIN MUTATED        4      5      2      2
  1P GAIN WILD-TYPE     11     18      5     23
D1V3, multiclass
        clus
vv       1P GAIN MUTATED 1P GAIN WILD-TYPE
  CLUS_1               4                11
  CLUS_2               5                18
  CLUS_3               2                 5
  CLUS_4               2                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P GAIN MUTATED        3      1      9
  1P GAIN WILD-TYPE     24      3     30
D1V4, multiclass
        clus
vv       1P GAIN MUTATED 1P GAIN WILD-TYPE
  CLUS_1               3                24
  CLUS_2               1                 3
  CLUS_3               9                30
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P GAIN MUTATED        8      3      3
  1P GAIN WILD-TYPE     22     11     25
D1V5, multiclass
        clus
vv       1P GAIN MUTATED 1P GAIN WILD-TYPE
  CLUS_1               8                22
  CLUS_2               3                11
  CLUS_3               3                25
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P GAIN MUTATED        0      3     11
  1P GAIN WILD-TYPE      1     25     32
D1V6, multiclass
        clus
vv       1P GAIN MUTATED 1P GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               3                25
  CLUS_3              11                32
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1P GAIN MUTATED        1      5      5      3
  1P GAIN WILD-TYPE     11      4     20     23
D1V7, multiclass
        clus
vv       1P GAIN MUTATED 1P GAIN WILD-TYPE
  CLUS_1               1                11
  CLUS_2               5                 4
  CLUS_3               5                20
  CLUS_4               3                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P GAIN MUTATED        0      3     11
  1P GAIN WILD-TYPE      1     25     32
D1V8, multiclass
        clus
vv       1P GAIN MUTATED 1P GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               3                25
  CLUS_3              11                32

Clustering(2) Variable = 1Q GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q GAIN MUTATED        6     16     10
  1Q GAIN WILD-TYPE     32     23     16
D2V1, multiclass
        clus
vv       1Q GAIN MUTATED 1Q GAIN WILD-TYPE
  CLUS_1               6                32
  CLUS_2              16                23
  CLUS_3              10                16
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q GAIN MUTATED        8     17      7
  1Q GAIN WILD-TYPE     32     26     13
D2V2, multiclass
        clus
vv       1Q GAIN MUTATED 1Q GAIN WILD-TYPE
  CLUS_1               8                32
  CLUS_2              17                26
  CLUS_3               7                13
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1Q GAIN MUTATED        8     10      4      4
  1Q GAIN WILD-TYPE      7     13      3     21
D2V3, multiclass
        clus
vv       1Q GAIN MUTATED 1Q GAIN WILD-TYPE
  CLUS_1               8                 7
  CLUS_2              10                13
  CLUS_3               4                 3
  CLUS_4               4                21
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q GAIN MUTATED        5      2     19
  1Q GAIN WILD-TYPE     22      2     20
D2V4, multiclass
        clus
vv       1Q GAIN MUTATED 1Q GAIN WILD-TYPE
  CLUS_1               5                22
  CLUS_2               2                 2
  CLUS_3              19                20
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q GAIN MUTATED       15      6      5
  1Q GAIN WILD-TYPE     15      8     23
D2V5, multiclass
        clus
vv       1Q GAIN MUTATED 1Q GAIN WILD-TYPE
  CLUS_1              15                15
  CLUS_2               6                 8
  CLUS_3               5                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q GAIN MUTATED        0      5     21
  1Q GAIN WILD-TYPE      1     23     22
D2V6, multiclass
        clus
vv       1Q GAIN MUTATED 1Q GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               5                23
  CLUS_3              21                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1Q GAIN MUTATED        3      6     13      4
  1Q GAIN WILD-TYPE      9      3     12     22
D2V7, multiclass
        clus
vv       1Q GAIN MUTATED 1Q GAIN WILD-TYPE
  CLUS_1               3                 9
  CLUS_2               6                 3
  CLUS_3              13                12
  CLUS_4               4                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q GAIN MUTATED        0      5     21
  1Q GAIN WILD-TYPE      1     23     22
D2V8, multiclass
        clus
vv       1Q GAIN MUTATED 1Q GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               5                23
  CLUS_3              21                22

Clustering(3) Variable = 2P GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2P GAIN MUTATED        6     19     15
  2P GAIN WILD-TYPE     32     20     11
D3V1, multiclass
        clus
vv       2P GAIN MUTATED 2P GAIN WILD-TYPE
  CLUS_1               6                32
  CLUS_2              19                20
  CLUS_3              15                11
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2P GAIN MUTATED       18     17      5
  2P GAIN WILD-TYPE     22     26     15
D3V2, multiclass
        clus
vv       2P GAIN MUTATED 2P GAIN WILD-TYPE
  CLUS_1              18                22
  CLUS_2              17                26
  CLUS_3               5                15
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  2P GAIN MUTATED        5     10      5      9
  2P GAIN WILD-TYPE     10     13      2     16
D3V3, multiclass
        clus
vv       2P GAIN MUTATED 2P GAIN WILD-TYPE
  CLUS_1               5                10
  CLUS_2              10                13
  CLUS_3               5                 2
  CLUS_4               9                16
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2P GAIN MUTATED       10      1     18
  2P GAIN WILD-TYPE     17      3     21
D3V4, multiclass
        clus
vv       2P GAIN MUTATED 2P GAIN WILD-TYPE
  CLUS_1              10                17
  CLUS_2               1                 3
  CLUS_3              18                21
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2P GAIN MUTATED       16      3     10
  2P GAIN WILD-TYPE     14     11     18
D3V5, multiclass
        clus
vv       2P GAIN MUTATED 2P GAIN WILD-TYPE
  CLUS_1              16                14
  CLUS_2               3                11
  CLUS_3              10                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2P GAIN MUTATED        0     10     19
  2P GAIN WILD-TYPE      1     18     24
D3V6, multiclass
        clus
vv       2P GAIN MUTATED 2P GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              10                18
  CLUS_3              19                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  2P GAIN MUTATED        1      6     14      8
  2P GAIN WILD-TYPE     11      3     11     18
D3V7, multiclass
        clus
vv       2P GAIN MUTATED 2P GAIN WILD-TYPE
  CLUS_1               1                11
  CLUS_2               6                 3
  CLUS_3              14                11
  CLUS_4               8                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2P GAIN MUTATED        0     10     19
  2P GAIN WILD-TYPE      1     18     24
D3V8, multiclass
        clus
vv       2P GAIN MUTATED 2P GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              10                18
  CLUS_3              19                24

Clustering(4) Variable = 2Q GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2Q GAIN MUTATED        6     14     10
  2Q GAIN WILD-TYPE     32     25     16
D4V1, multiclass
        clus
vv       2Q GAIN MUTATED 2Q GAIN WILD-TYPE
  CLUS_1               6                32
  CLUS_2              14                25
  CLUS_3              10                16
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2Q GAIN MUTATED       15     13      2
  2Q GAIN WILD-TYPE     25     30     18
D4V2, multiclass
        clus
vv       2Q GAIN MUTATED 2Q GAIN WILD-TYPE
  CLUS_1              15                25
  CLUS_2              13                30
  CLUS_3               2                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  2Q GAIN MUTATED        3      9      2      7
  2Q GAIN WILD-TYPE     12     14      5     18
D4V3, multiclass
        clus
vv       2Q GAIN MUTATED 2Q GAIN WILD-TYPE
  CLUS_1               3                12
  CLUS_2               9                14
  CLUS_3               2                 5
  CLUS_4               7                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2Q GAIN MUTATED        9      0     12
  2Q GAIN WILD-TYPE     18      4     27
D4V4, multiclass
        clus
vv       2Q GAIN MUTATED 2Q GAIN WILD-TYPE
  CLUS_1               9                18
  CLUS_2               0                 4
  CLUS_3              12                27
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2Q GAIN MUTATED       10      2      9
  2Q GAIN WILD-TYPE     20     12     19
D4V5, multiclass
        clus
vv       2Q GAIN MUTATED 2Q GAIN WILD-TYPE
  CLUS_1              10                20
  CLUS_2               2                12
  CLUS_3               9                19
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2Q GAIN MUTATED        0      9     12
  2Q GAIN WILD-TYPE      1     19     31
D4V6, multiclass
        clus
vv       2Q GAIN MUTATED 2Q GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               9                19
  CLUS_3              12                31
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  2Q GAIN MUTATED        0      5      9      7
  2Q GAIN WILD-TYPE     12      4     16     19
D4V7, multiclass
        clus
vv       2Q GAIN MUTATED 2Q GAIN WILD-TYPE
  CLUS_1               0                12
  CLUS_2               5                 4
  CLUS_3               9                16
  CLUS_4               7                19
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2Q GAIN MUTATED        0      9     12
  2Q GAIN WILD-TYPE      1     19     31
D4V8, multiclass
        clus
vv       2Q GAIN MUTATED 2Q GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               9                19
  CLUS_3              12                31

Clustering(5) Variable = 3P GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P GAIN MUTATED        2      8      4
  3P GAIN WILD-TYPE     36     31     22
D5V1, multiclass
        clus
vv       3P GAIN MUTATED 3P GAIN WILD-TYPE
  CLUS_1               2                36
  CLUS_2               8                31
  CLUS_3               4                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P GAIN MUTATED        5      7      2
  3P GAIN WILD-TYPE     35     36     18
D5V2, multiclass
        clus
vv       3P GAIN MUTATED 3P GAIN WILD-TYPE
  CLUS_1               5                35
  CLUS_2               7                36
  CLUS_3               2                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3P GAIN MUTATED        3      4      2      2
  3P GAIN WILD-TYPE     12     19      5     23
D5V3, multiclass
        clus
vv       3P GAIN MUTATED 3P GAIN WILD-TYPE
  CLUS_1               3                12
  CLUS_2               4                19
  CLUS_3               2                 5
  CLUS_4               2                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P GAIN MUTATED        2      1      8
  3P GAIN WILD-TYPE     25      3     31
D5V4, multiclass
        clus
vv       3P GAIN MUTATED 3P GAIN WILD-TYPE
  CLUS_1               2                25
  CLUS_2               1                 3
  CLUS_3               8                31
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P GAIN MUTATED        8      1      2
  3P GAIN WILD-TYPE     22     13     26
D5V5, multiclass
        clus
vv       3P GAIN MUTATED 3P GAIN WILD-TYPE
  CLUS_1               8                22
  CLUS_2               1                13
  CLUS_3               2                26
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P GAIN MUTATED        0      2      9
  3P GAIN WILD-TYPE      1     26     34
D5V6, multiclass
        clus
vv       3P GAIN MUTATED 3P GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               2                26
  CLUS_3               9                34
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3P GAIN MUTATED        1      3      6      1
  3P GAIN WILD-TYPE     11      6     19     25
D5V7, multiclass
        clus
vv       3P GAIN MUTATED 3P GAIN WILD-TYPE
  CLUS_1               1                11
  CLUS_2               3                 6
  CLUS_3               6                19
  CLUS_4               1                25
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P GAIN MUTATED        0      2      9
  3P GAIN WILD-TYPE      1     26     34
D5V8, multiclass
        clus
vv       3P GAIN MUTATED 3P GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               2                26
  CLUS_3               9                34

Clustering(6) Variable = 3Q GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q GAIN MUTATED        4     20     15
  3Q GAIN WILD-TYPE     34     19     11
D6V1, multiclass
        clus
vv       3Q GAIN MUTATED 3Q GAIN WILD-TYPE
  CLUS_1               4                34
  CLUS_2              20                19
  CLUS_3              15                11
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q GAIN MUTATED       11     23      5
  3Q GAIN WILD-TYPE     29     20     15
D6V2, multiclass
        clus
vv       3Q GAIN MUTATED 3Q GAIN WILD-TYPE
  CLUS_1              11                29
  CLUS_2              23                20
  CLUS_3               5                15
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3Q GAIN MUTATED        7     14      4      6
  3Q GAIN WILD-TYPE      8      9      3     19
D6V3, multiclass
        clus
vv       3Q GAIN MUTATED 3Q GAIN WILD-TYPE
  CLUS_1               7                 8
  CLUS_2              14                 9
  CLUS_3               4                 3
  CLUS_4               6                19
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q GAIN MUTATED        6      3     22
  3Q GAIN WILD-TYPE     21      1     17
D6V4, multiclass
        clus
vv       3Q GAIN MUTATED 3Q GAIN WILD-TYPE
  CLUS_1               6                21
  CLUS_2               3                 1
  CLUS_3              22                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q GAIN MUTATED       20      6      6
  3Q GAIN WILD-TYPE     10      8     22
D6V5, multiclass
        clus
vv       3Q GAIN MUTATED 3Q GAIN WILD-TYPE
  CLUS_1              20                10
  CLUS_2               6                 8
  CLUS_3               6                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q GAIN MUTATED        0      6     26
  3Q GAIN WILD-TYPE      1     22     17
D6V6, multiclass
        clus
vv       3Q GAIN MUTATED 3Q GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               6                22
  CLUS_3              26                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3Q GAIN MUTATED        8      5     14      5
  3Q GAIN WILD-TYPE      4      4     11     21
D6V7, multiclass
        clus
vv       3Q GAIN MUTATED 3Q GAIN WILD-TYPE
  CLUS_1               8                 4
  CLUS_2               5                 4
  CLUS_3              14                11
  CLUS_4               5                21
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q GAIN MUTATED        0      6     26
  3Q GAIN WILD-TYPE      1     22     17
D6V8, multiclass
        clus
vv       3Q GAIN MUTATED 3Q GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               6                22
  CLUS_3              26                17

Clustering(7) Variable = 4P GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P GAIN MUTATED        3      4      3
  4P GAIN WILD-TYPE     35     35     23
D7V1, multiclass
        clus
vv       4P GAIN MUTATED 4P GAIN WILD-TYPE
  CLUS_1               3                35
  CLUS_2               4                35
  CLUS_3               3                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P GAIN MUTATED        4      3      3
  4P GAIN WILD-TYPE     36     40     17
D7V2, multiclass
        clus
vv       4P GAIN MUTATED 4P GAIN WILD-TYPE
  CLUS_1               4                36
  CLUS_2               3                40
  CLUS_3               3                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4P GAIN MUTATED        1      1      1      2
  4P GAIN WILD-TYPE     14     22      6     23
D7V3, multiclass
        clus
vv       4P GAIN MUTATED 4P GAIN WILD-TYPE
  CLUS_1               1                14
  CLUS_2               1                22
  CLUS_3               1                 6
  CLUS_4               2                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P GAIN MUTATED        2      0      3
  4P GAIN WILD-TYPE     25      4     36
D7V4, multiclass
        clus
vv       4P GAIN MUTATED 4P GAIN WILD-TYPE
  CLUS_1               2                25
  CLUS_2               0                 4
  CLUS_3               3                36
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P GAIN MUTATED        2      2      2
  4P GAIN WILD-TYPE     28     12     26
D7V5, multiclass
        clus
vv       4P GAIN MUTATED 4P GAIN WILD-TYPE
  CLUS_1               2                28
  CLUS_2               2                12
  CLUS_3               2                26
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P GAIN MUTATED        0      2      4
  4P GAIN WILD-TYPE      1     26     39
D7V6, multiclass
        clus
vv       4P GAIN MUTATED 4P GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               2                26
  CLUS_3               4                39
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4P GAIN MUTATED        1      1      2      2
  4P GAIN WILD-TYPE     11      8     23     24
D7V7, multiclass
        clus
vv       4P GAIN MUTATED 4P GAIN WILD-TYPE
  CLUS_1               1                11
  CLUS_2               1                 8
  CLUS_3               2                23
  CLUS_4               2                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P GAIN MUTATED        0      2      4
  4P GAIN WILD-TYPE      1     26     39
D7V8, multiclass
        clus
vv       4P GAIN MUTATED 4P GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               2                26
  CLUS_3               4                39

Clustering(8) Variable = 4Q GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q GAIN MUTATED        2      5      2
  4Q GAIN WILD-TYPE     36     34     24
D8V1, multiclass
        clus
vv       4Q GAIN MUTATED 4Q GAIN WILD-TYPE
  CLUS_1               2                36
  CLUS_2               5                34
  CLUS_3               2                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q GAIN MUTATED        2      3      4
  4Q GAIN WILD-TYPE     38     40     16
D8V2, multiclass
        clus
vv       4Q GAIN MUTATED 4Q GAIN WILD-TYPE
  CLUS_1               2                38
  CLUS_2               3                40
  CLUS_3               4                16
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4Q GAIN MUTATED        3      1      1      1
  4Q GAIN WILD-TYPE     12     22      6     24
D8V3, multiclass
        clus
vv       4Q GAIN MUTATED 4Q GAIN WILD-TYPE
  CLUS_1               3                12
  CLUS_2               1                22
  CLUS_3               1                 6
  CLUS_4               1                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q GAIN MUTATED        1      0      5
  4Q GAIN WILD-TYPE     26      4     34
D8V4, multiclass
        clus
vv       4Q GAIN MUTATED 4Q GAIN WILD-TYPE
  CLUS_1               1                26
  CLUS_2               0                 4
  CLUS_3               5                34
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q GAIN MUTATED        2      3      1
  4Q GAIN WILD-TYPE     28     11     27
D8V5, multiclass
        clus
vv       4Q GAIN MUTATED 4Q GAIN WILD-TYPE
  CLUS_1               2                28
  CLUS_2               3                11
  CLUS_3               1                27
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q GAIN MUTATED        0      1      5
  4Q GAIN WILD-TYPE      1     27     38
D8V6, multiclass
        clus
vv       4Q GAIN MUTATED 4Q GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               1                27
  CLUS_3               5                38
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4Q GAIN MUTATED        2      1      2      1
  4Q GAIN WILD-TYPE     10      8     23     25
D8V7, multiclass
        clus
vv       4Q GAIN MUTATED 4Q GAIN WILD-TYPE
  CLUS_1               2                10
  CLUS_2               1                 8
  CLUS_3               2                23
  CLUS_4               1                25
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q GAIN MUTATED        0      1      5
  4Q GAIN WILD-TYPE      1     27     38
D8V8, multiclass
        clus
vv       4Q GAIN MUTATED 4Q GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               1                27
  CLUS_3               5                38

Clustering(9) Variable = 5P GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P GAIN MUTATED       11     23     11
  5P GAIN WILD-TYPE     27     16     15
D9V1, multiclass
        clus
vv       5P GAIN MUTATED 5P GAIN WILD-TYPE
  CLUS_1              11                27
  CLUS_2              23                16
  CLUS_3              11                15
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P GAIN MUTATED       14     23      8
  5P GAIN WILD-TYPE     26     20     12
D9V2, multiclass
        clus
vv       5P GAIN MUTATED 5P GAIN WILD-TYPE
  CLUS_1              14                26
  CLUS_2              23                20
  CLUS_3               8                12
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5P GAIN MUTATED        6     11      5      9
  5P GAIN WILD-TYPE      9     12      2     16
D9V3, multiclass
        clus
vv       5P GAIN MUTATED 5P GAIN WILD-TYPE
  CLUS_1               6                 9
  CLUS_2              11                12
  CLUS_3               5                 2
  CLUS_4               9                16
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P GAIN MUTATED       10      0     21
  5P GAIN WILD-TYPE     17      4     18
D9V4, multiclass
        clus
vv       5P GAIN MUTATED 5P GAIN WILD-TYPE
  CLUS_1              10                17
  CLUS_2               0                 4
  CLUS_3              21                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P GAIN MUTATED       17      5     11
  5P GAIN WILD-TYPE     13      9     17
D9V5, multiclass
        clus
vv       5P GAIN MUTATED 5P GAIN WILD-TYPE
  CLUS_1              17                13
  CLUS_2               5                 9
  CLUS_3              11                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P GAIN MUTATED        0     11     22
  5P GAIN WILD-TYPE      1     17     21
D9V6, multiclass
        clus
vv       5P GAIN MUTATED 5P GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              11                17
  CLUS_3              22                21
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5P GAIN MUTATED        5      3     15     10
  5P GAIN WILD-TYPE      7      6     10     16
D9V7, multiclass
        clus
vv       5P GAIN MUTATED 5P GAIN WILD-TYPE
  CLUS_1               5                 7
  CLUS_2               3                 6
  CLUS_3              15                10
  CLUS_4              10                16
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P GAIN MUTATED        0     11     22
  5P GAIN WILD-TYPE      1     17     21
D9V8, multiclass
        clus
vv       5P GAIN MUTATED 5P GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              11                17
  CLUS_3              22                21

Clustering(10) Variable = 5Q GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q GAIN MUTATED        4      7      4
  5Q GAIN WILD-TYPE     34     32     22
D10V1, multiclass
        clus
vv       5Q GAIN MUTATED 5Q GAIN WILD-TYPE
  CLUS_1               4                34
  CLUS_2               7                32
  CLUS_3               4                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q GAIN MUTATED        6      7      2
  5Q GAIN WILD-TYPE     34     36     18
D10V2, multiclass
        clus
vv       5Q GAIN MUTATED 5Q GAIN WILD-TYPE
  CLUS_1               6                34
  CLUS_2               7                36
  CLUS_3               2                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5Q GAIN MUTATED        3      2      1      3
  5Q GAIN WILD-TYPE     12     21      6     22
D10V3, multiclass
        clus
vv       5Q GAIN MUTATED 5Q GAIN WILD-TYPE
  CLUS_1               3                12
  CLUS_2               2                21
  CLUS_3               1                 6
  CLUS_4               3                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q GAIN MUTATED        4      0      5
  5Q GAIN WILD-TYPE     23      4     34
D10V4, multiclass
        clus
vv       5Q GAIN MUTATED 5Q GAIN WILD-TYPE
  CLUS_1               4                23
  CLUS_2               0                 4
  CLUS_3               5                34
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q GAIN MUTATED        4      1      5
  5Q GAIN WILD-TYPE     26     13     23
D10V5, multiclass
        clus
vv       5Q GAIN MUTATED 5Q GAIN WILD-TYPE
  CLUS_1               4                26
  CLUS_2               1                13
  CLUS_3               5                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q GAIN MUTATED        0      5      5
  5Q GAIN WILD-TYPE      1     23     38
D10V6, multiclass
        clus
vv       5Q GAIN MUTATED 5Q GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               5                23
  CLUS_3               5                38
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5Q GAIN MUTATED        2      1      3      4
  5Q GAIN WILD-TYPE     10      8     22     22
D10V7, multiclass
        clus
vv       5Q GAIN MUTATED 5Q GAIN WILD-TYPE
  CLUS_1               2                10
  CLUS_2               1                 8
  CLUS_3               3                22
  CLUS_4               4                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q GAIN MUTATED        0      5      5
  5Q GAIN WILD-TYPE      1     23     38
D10V8, multiclass
        clus
vv       5Q GAIN MUTATED 5Q GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               5                23
  CLUS_3               5                38

Clustering(11) Variable = 6P GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P GAIN MUTATED        6      5      6
  6P GAIN WILD-TYPE     32     34     20
D11V1, multiclass
        clus
vv       6P GAIN MUTATED 6P GAIN WILD-TYPE
  CLUS_1               6                32
  CLUS_2               5                34
  CLUS_3               6                20
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P GAIN MUTATED        7      7      3
  6P GAIN WILD-TYPE     33     36     17
D11V2, multiclass
        clus
vv       6P GAIN MUTATED 6P GAIN WILD-TYPE
  CLUS_1               7                33
  CLUS_2               7                36
  CLUS_3               3                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6P GAIN MUTATED        2      1      4      3
  6P GAIN WILD-TYPE     13     22      3     22
D11V3, multiclass
        clus
vv       6P GAIN MUTATED 6P GAIN WILD-TYPE
  CLUS_1               2                13
  CLUS_2               1                22
  CLUS_3               4                 3
  CLUS_4               3                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P GAIN MUTATED        4      1      5
  6P GAIN WILD-TYPE     23      3     34
D11V4, multiclass
        clus
vv       6P GAIN MUTATED 6P GAIN WILD-TYPE
  CLUS_1               4                23
  CLUS_2               1                 3
  CLUS_3               5                34
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P GAIN MUTATED        4      2      4
  6P GAIN WILD-TYPE     26     12     24
D11V5, multiclass
        clus
vv       6P GAIN MUTATED 6P GAIN WILD-TYPE
  CLUS_1               4                26
  CLUS_2               2                12
  CLUS_3               4                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P GAIN MUTATED        0      4      6
  6P GAIN WILD-TYPE      1     24     37
D11V6, multiclass
        clus
vv       6P GAIN MUTATED 6P GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               4                24
  CLUS_3               6                37
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6P GAIN MUTATED        2      2      2      4
  6P GAIN WILD-TYPE     10      7     23     22
D11V7, multiclass
        clus
vv       6P GAIN MUTATED 6P GAIN WILD-TYPE
  CLUS_1               2                10
  CLUS_2               2                 7
  CLUS_3               2                23
  CLUS_4               4                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P GAIN MUTATED        0      4      6
  6P GAIN WILD-TYPE      1     24     37
D11V8, multiclass
        clus
vv       6P GAIN MUTATED 6P GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               4                24
  CLUS_3               6                37

Clustering(12) Variable = 6Q GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q GAIN MUTATED        5      4      7
  6Q GAIN WILD-TYPE     33     35     19
D12V1, multiclass
        clus
vv       6Q GAIN MUTATED 6Q GAIN WILD-TYPE
  CLUS_1               5                33
  CLUS_2               4                35
  CLUS_3               7                19
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q GAIN MUTATED        8      6      2
  6Q GAIN WILD-TYPE     32     37     18
D12V2, multiclass
        clus
vv       6Q GAIN MUTATED 6Q GAIN WILD-TYPE
  CLUS_1               8                32
  CLUS_2               6                37
  CLUS_3               2                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6Q GAIN MUTATED        2      1      4      2
  6Q GAIN WILD-TYPE     13     22      3     23
D12V3, multiclass
        clus
vv       6Q GAIN MUTATED 6Q GAIN WILD-TYPE
  CLUS_1               2                13
  CLUS_2               1                22
  CLUS_3               4                 3
  CLUS_4               2                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q GAIN MUTATED        3      1      5
  6Q GAIN WILD-TYPE     24      3     34
D12V4, multiclass
        clus
vv       6Q GAIN MUTATED 6Q GAIN WILD-TYPE
  CLUS_1               3                24
  CLUS_2               1                 3
  CLUS_3               5                34
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q GAIN MUTATED        4      2      3
  6Q GAIN WILD-TYPE     26     12     25
D12V5, multiclass
        clus
vv       6Q GAIN MUTATED 6Q GAIN WILD-TYPE
  CLUS_1               4                26
  CLUS_2               2                12
  CLUS_3               3                25
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q GAIN MUTATED        0      3      6
  6Q GAIN WILD-TYPE      1     25     37
D12V6, multiclass
        clus
vv       6Q GAIN MUTATED 6Q GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               3                25
  CLUS_3               6                37
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6Q GAIN MUTATED        2      1      3      3
  6Q GAIN WILD-TYPE     10      8     22     23
D12V7, multiclass
        clus
vv       6Q GAIN MUTATED 6Q GAIN WILD-TYPE
  CLUS_1               2                10
  CLUS_2               1                 8
  CLUS_3               3                22
  CLUS_4               3                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q GAIN MUTATED        0      3      6
  6Q GAIN WILD-TYPE      1     25     37
D12V8, multiclass
        clus
vv       6Q GAIN MUTATED 6Q GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               3                25
  CLUS_3               6                37

Clustering(13) Variable = 7P GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7P GAIN MUTATED       18     23     21
  7P GAIN WILD-TYPE     20     16      5
D13V1, multiclass
        clus
vv       7P GAIN MUTATED 7P GAIN WILD-TYPE
  CLUS_1              18                20
  CLUS_2              23                16
  CLUS_3              21                 5
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7P GAIN MUTATED       27     25     10
  7P GAIN WILD-TYPE     13     18     10
D13V2, multiclass
        clus
vv       7P GAIN MUTATED 7P GAIN WILD-TYPE
  CLUS_1              27                13
  CLUS_2              25                18
  CLUS_3              10                10
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  7P GAIN MUTATED        4     20      6     16
  7P GAIN WILD-TYPE     11      3      1      9
D13V3, multiclass
        clus
vv       7P GAIN MUTATED 7P GAIN WILD-TYPE
  CLUS_1               4                11
  CLUS_2              20                 3
  CLUS_3               6                 1
  CLUS_4              16                 9
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7P GAIN MUTATED       18      1     27
  7P GAIN WILD-TYPE      9      3     12
D13V4, multiclass
        clus
vv       7P GAIN MUTATED 7P GAIN WILD-TYPE
  CLUS_1              18                 9
  CLUS_2               1                 3
  CLUS_3              27                12
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7P GAIN MUTATED       21      8     18
  7P GAIN WILD-TYPE      9      6     10
D13V5, multiclass
        clus
vv       7P GAIN MUTATED 7P GAIN WILD-TYPE
  CLUS_1              21                 9
  CLUS_2               8                 6
  CLUS_3              18                10
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7P GAIN MUTATED        0     18     29
  7P GAIN WILD-TYPE      1     10     14
D13V6, multiclass
        clus
vv       7P GAIN MUTATED 7P GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              18                10
  CLUS_3              29                14
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  7P GAIN MUTATED        7      5     19     16
  7P GAIN WILD-TYPE      5      4      6     10
D13V7, multiclass
        clus
vv       7P GAIN MUTATED 7P GAIN WILD-TYPE
  CLUS_1               7                 5
  CLUS_2               5                 4
  CLUS_3              19                 6
  CLUS_4              16                10
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7P GAIN MUTATED        0     18     29
  7P GAIN WILD-TYPE      1     10     14
D13V8, multiclass
        clus
vv       7P GAIN MUTATED 7P GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              18                10
  CLUS_3              29                14

Clustering(14) Variable = 7Q GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7Q GAIN MUTATED       15     19     15
  7Q GAIN WILD-TYPE     23     20     11
D14V1, multiclass
        clus
vv       7Q GAIN MUTATED 7Q GAIN WILD-TYPE
  CLUS_1              15                23
  CLUS_2              19                20
  CLUS_3              15                11
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7Q GAIN MUTATED       22     22      5
  7Q GAIN WILD-TYPE     18     21     15
D14V2, multiclass
        clus
vv       7Q GAIN MUTATED 7Q GAIN WILD-TYPE
  CLUS_1              22                18
  CLUS_2              22                21
  CLUS_3               5                15
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  7Q GAIN MUTATED        7     13      5     10
  7Q GAIN WILD-TYPE      8     10      2     15
D14V3, multiclass
        clus
vv       7Q GAIN MUTATED 7Q GAIN WILD-TYPE
  CLUS_1               7                 8
  CLUS_2              13                10
  CLUS_3               5                 2
  CLUS_4              10                15
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7Q GAIN MUTATED       12      2     21
  7Q GAIN WILD-TYPE     15      2     18
D14V4, multiclass
        clus
vv       7Q GAIN MUTATED 7Q GAIN WILD-TYPE
  CLUS_1              12                15
  CLUS_2               2                 2
  CLUS_3              21                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7Q GAIN MUTATED       17      6     12
  7Q GAIN WILD-TYPE     13      8     16
D14V5, multiclass
        clus
vv       7Q GAIN MUTATED 7Q GAIN WILD-TYPE
  CLUS_1              17                13
  CLUS_2               6                 8
  CLUS_3              12                16
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7Q GAIN MUTATED        0     12     23
  7Q GAIN WILD-TYPE      1     16     20
D14V6, multiclass
        clus
vv       7Q GAIN MUTATED 7Q GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              12                16
  CLUS_3              23                20
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  7Q GAIN MUTATED        4      6     14     11
  7Q GAIN WILD-TYPE      8      3     11     15
D14V7, multiclass
        clus
vv       7Q GAIN MUTATED 7Q GAIN WILD-TYPE
  CLUS_1               4                 8
  CLUS_2               6                 3
  CLUS_3              14                11
  CLUS_4              11                15
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7Q GAIN MUTATED        0     12     23
  7Q GAIN WILD-TYPE      1     16     20
D14V8, multiclass
        clus
vv       7Q GAIN MUTATED 7Q GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              12                16
  CLUS_3              23                20

Clustering(15) Variable = 8P GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P GAIN MUTATED       12     14     13
  8P GAIN WILD-TYPE     26     25     13
D15V1, multiclass
        clus
vv       8P GAIN MUTATED 8P GAIN WILD-TYPE
  CLUS_1              12                26
  CLUS_2              14                25
  CLUS_3              13                13
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P GAIN MUTATED       16     18      5
  8P GAIN WILD-TYPE     24     25     15
D15V2, multiclass
        clus
vv       8P GAIN MUTATED 8P GAIN WILD-TYPE
  CLUS_1              16                24
  CLUS_2              18                25
  CLUS_3               5                15
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8P GAIN MUTATED        7      8      1     10
  8P GAIN WILD-TYPE      8     15      6     15
D15V3, multiclass
        clus
vv       8P GAIN MUTATED 8P GAIN WILD-TYPE
  CLUS_1               7                 8
  CLUS_2               8                15
  CLUS_3               1                 6
  CLUS_4              10                15
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P GAIN MUTATED       10      1     15
  8P GAIN WILD-TYPE     17      3     24
D15V4, multiclass
        clus
vv       8P GAIN MUTATED 8P GAIN WILD-TYPE
  CLUS_1              10                17
  CLUS_2               1                 3
  CLUS_3              15                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P GAIN MUTATED       10      6     11
  8P GAIN WILD-TYPE     20      8     17
D15V5, multiclass
        clus
vv       8P GAIN MUTATED 8P GAIN WILD-TYPE
  CLUS_1              10                20
  CLUS_2               6                 8
  CLUS_3              11                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P GAIN MUTATED        0     11     16
  8P GAIN WILD-TYPE      1     17     27
D15V6, multiclass
        clus
vv       8P GAIN MUTATED 8P GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              11                17
  CLUS_3              16                27
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8P GAIN MUTATED        5      4      8     10
  8P GAIN WILD-TYPE      7      5     17     16
D15V7, multiclass
        clus
vv       8P GAIN MUTATED 8P GAIN WILD-TYPE
  CLUS_1               5                 7
  CLUS_2               4                 5
  CLUS_3               8                17
  CLUS_4              10                16
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P GAIN MUTATED        0     11     16
  8P GAIN WILD-TYPE      1     17     27
D15V8, multiclass
        clus
vv       8P GAIN MUTATED 8P GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              11                17
  CLUS_3              16                27

Clustering(16) Variable = 8Q GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q GAIN MUTATED       17     21     18
  8Q GAIN WILD-TYPE     21     18      8
D16V1, multiclass
        clus
vv       8Q GAIN MUTATED 8Q GAIN WILD-TYPE
  CLUS_1              17                21
  CLUS_2              21                18
  CLUS_3              18                 8
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q GAIN MUTATED       22     26      8
  8Q GAIN WILD-TYPE     18     17     12
D16V2, multiclass
        clus
vv       8Q GAIN MUTATED 8Q GAIN WILD-TYPE
  CLUS_1              22                18
  CLUS_2              26                17
  CLUS_3               8                12
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8Q GAIN MUTATED        8     13      3     14
  8Q GAIN WILD-TYPE      7     10      4     11
D16V3, multiclass
        clus
vv       8Q GAIN MUTATED 8Q GAIN WILD-TYPE
  CLUS_1               8                 7
  CLUS_2              13                10
  CLUS_3               3                 4
  CLUS_4              14                11
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q GAIN MUTATED       14      1     23
  8Q GAIN WILD-TYPE     13      3     16
D16V4, multiclass
        clus
vv       8Q GAIN MUTATED 8Q GAIN WILD-TYPE
  CLUS_1              14                13
  CLUS_2               1                 3
  CLUS_3              23                16
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q GAIN MUTATED       16      9     15
  8Q GAIN WILD-TYPE     14      5     13
D16V5, multiclass
        clus
vv       8Q GAIN MUTATED 8Q GAIN WILD-TYPE
  CLUS_1              16                14
  CLUS_2               9                 5
  CLUS_3              15                13
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q GAIN MUTATED        0     15     25
  8Q GAIN WILD-TYPE      1     13     18
D16V6, multiclass
        clus
vv       8Q GAIN MUTATED 8Q GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              15                13
  CLUS_3              25                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8Q GAIN MUTATED        8      4     14     14
  8Q GAIN WILD-TYPE      4      5     11     12
D16V7, multiclass
        clus
vv       8Q GAIN MUTATED 8Q GAIN WILD-TYPE
  CLUS_1               8                 4
  CLUS_2               4                 5
  CLUS_3              14                11
  CLUS_4              14                12
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q GAIN MUTATED        0     15     25
  8Q GAIN WILD-TYPE      1     13     18
D16V8, multiclass
        clus
vv       8Q GAIN MUTATED 8Q GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              15                13
  CLUS_3              25                18

Clustering(17) Variable = 9P GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P GAIN MUTATED        4      5      3
  9P GAIN WILD-TYPE     34     34     23
D17V1, multiclass
        clus
vv       9P GAIN MUTATED 9P GAIN WILD-TYPE
  CLUS_1               4                34
  CLUS_2               5                34
  CLUS_3               3                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P GAIN MUTATED        5      6      1
  9P GAIN WILD-TYPE     35     37     19
D17V2, multiclass
        clus
vv       9P GAIN MUTATED 9P GAIN WILD-TYPE
  CLUS_1               5                35
  CLUS_2               6                37
  CLUS_3               1                19
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  9P GAIN MUTATED        4      2      1      2
  9P GAIN WILD-TYPE     11     21      6     23
D17V3, multiclass
        clus
vv       9P GAIN MUTATED 9P GAIN WILD-TYPE
  CLUS_1               4                11
  CLUS_2               2                21
  CLUS_3               1                 6
  CLUS_4               2                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P GAIN MUTATED        2      1      6
  9P GAIN WILD-TYPE     25      3     33
D17V4, multiclass
        clus
vv       9P GAIN MUTATED 9P GAIN WILD-TYPE
  CLUS_1               2                25
  CLUS_2               1                 3
  CLUS_3               6                33
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P GAIN MUTATED        4      2      2
  9P GAIN WILD-TYPE     26     12     26
D17V5, multiclass
        clus
vv       9P GAIN MUTATED 9P GAIN WILD-TYPE
  CLUS_1               4                26
  CLUS_2               2                12
  CLUS_3               2                26
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P GAIN MUTATED        0      2      6
  9P GAIN WILD-TYPE      1     26     37
D17V6, multiclass
        clus
vv       9P GAIN MUTATED 9P GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               2                26
  CLUS_3               6                37
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  9P GAIN MUTATED        1      0      5      2
  9P GAIN WILD-TYPE     11      9     20     24
D17V7, multiclass
        clus
vv       9P GAIN MUTATED 9P GAIN WILD-TYPE
  CLUS_1               1                11
  CLUS_2               0                 9
  CLUS_3               5                20
  CLUS_4               2                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P GAIN MUTATED        0      2      6
  9P GAIN WILD-TYPE      1     26     37
D17V8, multiclass
        clus
vv       9P GAIN MUTATED 9P GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               2                26
  CLUS_3               6                37

Clustering(18) Variable = 9Q GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9Q GAIN MUTATED        8      9      6
  9Q GAIN WILD-TYPE     30     30     20
D18V1, multiclass
        clus
vv       9Q GAIN MUTATED 9Q GAIN WILD-TYPE
  CLUS_1               8                30
  CLUS_2               9                30
  CLUS_3               6                20
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9Q GAIN MUTATED       10     11      2
  9Q GAIN WILD-TYPE     30     32     18
D18V2, multiclass
        clus
vv       9Q GAIN MUTATED 9Q GAIN WILD-TYPE
  CLUS_1              10                30
  CLUS_2              11                32
  CLUS_3               2                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  9Q GAIN MUTATED        5      6      3      4
  9Q GAIN WILD-TYPE     10     17      4     21
D18V3, multiclass
        clus
vv       9Q GAIN MUTATED 9Q GAIN WILD-TYPE
  CLUS_1               5                10
  CLUS_2               6                17
  CLUS_3               3                 4
  CLUS_4               4                21
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9Q GAIN MUTATED        5      1     12
  9Q GAIN WILD-TYPE     22      3     27
D18V4, multiclass
        clus
vv       9Q GAIN MUTATED 9Q GAIN WILD-TYPE
  CLUS_1               5                22
  CLUS_2               1                 3
  CLUS_3              12                27
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9Q GAIN MUTATED        7      5      5
  9Q GAIN WILD-TYPE     23      9     23
D18V5, multiclass
        clus
vv       9Q GAIN MUTATED 9Q GAIN WILD-TYPE
  CLUS_1               7                23
  CLUS_2               5                 9
  CLUS_3               5                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9Q GAIN MUTATED        0      5     12
  9Q GAIN WILD-TYPE      1     23     31
D18V6, multiclass
        clus
vv       9Q GAIN MUTATED 9Q GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               5                23
  CLUS_3              12                31
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  9Q GAIN MUTATED        4      1      7      5
  9Q GAIN WILD-TYPE      8      8     18     21
D18V7, multiclass
        clus
vv       9Q GAIN MUTATED 9Q GAIN WILD-TYPE
  CLUS_1               4                 8
  CLUS_2               1                 8
  CLUS_3               7                18
  CLUS_4               5                21
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9Q GAIN MUTATED        0      5     12
  9Q GAIN WILD-TYPE      1     23     31
D18V8, multiclass
        clus
vv       9Q GAIN MUTATED 9Q GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               5                23
  CLUS_3              12                31

Clustering(19) Variable = 10P GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P GAIN MUTATED        7      7      7
  10P GAIN WILD-TYPE     31     32     19
D19V1, multiclass
        clus
vv       10P GAIN MUTATED 10P GAIN WILD-TYPE
  CLUS_1                7                 31
  CLUS_2                7                 32
  CLUS_3                7                 19
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P GAIN MUTATED       12      7      2
  10P GAIN WILD-TYPE     28     36     18
D19V2, multiclass
        clus
vv       10P GAIN MUTATED 10P GAIN WILD-TYPE
  CLUS_1               12                 28
  CLUS_2                7                 36
  CLUS_3                2                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10P GAIN MUTATED        1      5      2      6
  10P GAIN WILD-TYPE     14     18      5     19
D19V3, multiclass
        clus
vv       10P GAIN MUTATED 10P GAIN WILD-TYPE
  CLUS_1                1                 14
  CLUS_2                5                 18
  CLUS_3                2                  5
  CLUS_4                6                 19
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P GAIN MUTATED        6      1      7
  10P GAIN WILD-TYPE     21      3     32
D19V4, multiclass
        clus
vv       10P GAIN MUTATED 10P GAIN WILD-TYPE
  CLUS_1                6                 21
  CLUS_2                1                  3
  CLUS_3                7                 32
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P GAIN MUTATED        8      0      6
  10P GAIN WILD-TYPE     22     14     22
D19V5, multiclass
        clus
vv       10P GAIN MUTATED 10P GAIN WILD-TYPE
  CLUS_1                8                 22
  CLUS_2                0                 14
  CLUS_3                6                 22
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P GAIN MUTATED        0      6      8
  10P GAIN WILD-TYPE      1     22     35
D19V6, multiclass
        clus
vv       10P GAIN MUTATED 10P GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                6                 22
  CLUS_3                8                 35
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10P GAIN MUTATED        0      2      7      5
  10P GAIN WILD-TYPE     12      7     18     21
D19V7, multiclass
        clus
vv       10P GAIN MUTATED 10P GAIN WILD-TYPE
  CLUS_1                0                 12
  CLUS_2                2                  7
  CLUS_3                7                 18
  CLUS_4                5                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P GAIN MUTATED        0      6      8
  10P GAIN WILD-TYPE      1     22     35
D19V8, multiclass
        clus
vv       10P GAIN MUTATED 10P GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                6                 22
  CLUS_3                8                 35

Clustering(20) Variable = 10Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q GAIN MUTATED        5      4      7
  10Q GAIN WILD-TYPE     33     35     19
D20V1, multiclass
        clus
vv       10Q GAIN MUTATED 10Q GAIN WILD-TYPE
  CLUS_1                5                 33
  CLUS_2                4                 35
  CLUS_3                7                 19
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q GAIN MUTATED        9      5      2
  10Q GAIN WILD-TYPE     31     38     18
D20V2, multiclass
        clus
vv       10Q GAIN MUTATED 10Q GAIN WILD-TYPE
  CLUS_1                9                 31
  CLUS_2                5                 38
  CLUS_3                2                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10Q GAIN MUTATED        2      4      1      4
  10Q GAIN WILD-TYPE     13     19      6     21
D20V3, multiclass
        clus
vv       10Q GAIN MUTATED 10Q GAIN WILD-TYPE
  CLUS_1                2                 13
  CLUS_2                4                 19
  CLUS_3                1                  6
  CLUS_4                4                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q GAIN MUTATED        4      2      5
  10Q GAIN WILD-TYPE     23      2     34
D20V4, multiclass
        clus
vv       10Q GAIN MUTATED 10Q GAIN WILD-TYPE
  CLUS_1                4                 23
  CLUS_2                2                  2
  CLUS_3                5                 34
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q GAIN MUTATED        6      0      4
  10Q GAIN WILD-TYPE     24     14     24
D20V5, multiclass
        clus
vv       10Q GAIN MUTATED 10Q GAIN WILD-TYPE
  CLUS_1                6                 24
  CLUS_2                0                 14
  CLUS_3                4                 24
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q GAIN MUTATED        0      4      6
  10Q GAIN WILD-TYPE      1     24     37
D20V6, multiclass
        clus
vv       10Q GAIN MUTATED 10Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                4                 24
  CLUS_3                6                 37
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10Q GAIN MUTATED        0      2      5      3
  10Q GAIN WILD-TYPE     12      7     20     23
D20V7, multiclass
        clus
vv       10Q GAIN MUTATED 10Q GAIN WILD-TYPE
  CLUS_1                0                 12
  CLUS_2                2                  7
  CLUS_3                5                 20
  CLUS_4                3                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q GAIN MUTATED        0      4      6
  10Q GAIN WILD-TYPE      1     24     37
D20V8, multiclass
        clus
vv       10Q GAIN MUTATED 10Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                4                 24
  CLUS_3                6                 37

Clustering(21) Variable = 11P GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P GAIN MUTATED        8      6      6
  11P GAIN WILD-TYPE     30     33     20
D21V1, multiclass
        clus
vv       11P GAIN MUTATED 11P GAIN WILD-TYPE
  CLUS_1                8                 30
  CLUS_2                6                 33
  CLUS_3                6                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P GAIN MUTATED        9      7      4
  11P GAIN WILD-TYPE     31     36     16
D21V2, multiclass
        clus
vv       11P GAIN MUTATED 11P GAIN WILD-TYPE
  CLUS_1                9                 31
  CLUS_2                7                 36
  CLUS_3                4                 16
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11P GAIN MUTATED        6      1      2      6
  11P GAIN WILD-TYPE      9     22      5     19
D21V3, multiclass
        clus
vv       11P GAIN MUTATED 11P GAIN WILD-TYPE
  CLUS_1                6                  9
  CLUS_2                1                 22
  CLUS_3                2                  5
  CLUS_4                6                 19
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P GAIN MUTATED        7      1      7
  11P GAIN WILD-TYPE     20      3     32
D21V4, multiclass
        clus
vv       11P GAIN MUTATED 11P GAIN WILD-TYPE
  CLUS_1                7                 20
  CLUS_2                1                  3
  CLUS_3                7                 32
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P GAIN MUTATED        4      3      7
  11P GAIN WILD-TYPE     26     11     21
D21V5, multiclass
        clus
vv       11P GAIN MUTATED 11P GAIN WILD-TYPE
  CLUS_1                4                 26
  CLUS_2                3                 11
  CLUS_3                7                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P GAIN MUTATED        0      7      7
  11P GAIN WILD-TYPE      1     21     36
D21V6, multiclass
        clus
vv       11P GAIN MUTATED 11P GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                7                 21
  CLUS_3                7                 36
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11P GAIN MUTATED        2      3      3      6
  11P GAIN WILD-TYPE     10      6     22     20
D21V7, multiclass
        clus
vv       11P GAIN MUTATED 11P GAIN WILD-TYPE
  CLUS_1                2                 10
  CLUS_2                3                  6
  CLUS_3                3                 22
  CLUS_4                6                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P GAIN MUTATED        0      7      7
  11P GAIN WILD-TYPE      1     21     36
D21V8, multiclass
        clus
vv       11P GAIN MUTATED 11P GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                7                 21
  CLUS_3                7                 36

Clustering(22) Variable = 11Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q GAIN MUTATED        8      5      6
  11Q GAIN WILD-TYPE     30     34     20
D22V1, multiclass
        clus
vv       11Q GAIN MUTATED 11Q GAIN WILD-TYPE
  CLUS_1                8                 30
  CLUS_2                5                 34
  CLUS_3                6                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q GAIN MUTATED       11      6      2
  11Q GAIN WILD-TYPE     29     37     18
D22V2, multiclass
        clus
vv       11Q GAIN MUTATED 11Q GAIN WILD-TYPE
  CLUS_1               11                 29
  CLUS_2                6                 37
  CLUS_3                2                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11Q GAIN MUTATED        2      1      2      7
  11Q GAIN WILD-TYPE     13     22      5     18
D22V3, multiclass
        clus
vv       11Q GAIN MUTATED 11Q GAIN WILD-TYPE
  CLUS_1                2                 13
  CLUS_2                1                 22
  CLUS_3                2                  5
  CLUS_4                7                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q GAIN MUTATED        8      0      4
  11Q GAIN WILD-TYPE     19      4     35
D22V4, multiclass
        clus
vv       11Q GAIN MUTATED 11Q GAIN WILD-TYPE
  CLUS_1                8                 19
  CLUS_2                0                  4
  CLUS_3                4                 35
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q GAIN MUTATED        3      2      8
  11Q GAIN WILD-TYPE     27     12     20
D22V5, multiclass
        clus
vv       11Q GAIN MUTATED 11Q GAIN WILD-TYPE
  CLUS_1                3                 27
  CLUS_2                2                 12
  CLUS_3                8                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q GAIN MUTATED        0      8      5
  11Q GAIN WILD-TYPE      1     20     38
D22V6, multiclass
        clus
vv       11Q GAIN MUTATED 11Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                8                 20
  CLUS_3                5                 38
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11Q GAIN MUTATED        1      2      3      7
  11Q GAIN WILD-TYPE     11      7     22     19
D22V7, multiclass
        clus
vv       11Q GAIN MUTATED 11Q GAIN WILD-TYPE
  CLUS_1                1                 11
  CLUS_2                2                  7
  CLUS_3                3                 22
  CLUS_4                7                 19
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q GAIN MUTATED        0      8      5
  11Q GAIN WILD-TYPE      1     20     38
D22V8, multiclass
        clus
vv       11Q GAIN MUTATED 11Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                8                 20
  CLUS_3                5                 38

Clustering(23) Variable = 12P GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12P GAIN MUTATED        4     22     10
  12P GAIN WILD-TYPE     34     17     16
D23V1, multiclass
        clus
vv       12P GAIN MUTATED 12P GAIN WILD-TYPE
  CLUS_1                4                 34
  CLUS_2               22                 17
  CLUS_3               10                 16
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12P GAIN MUTATED        9     20      7
  12P GAIN WILD-TYPE     31     23     13
D23V2, multiclass
        clus
vv       12P GAIN MUTATED 12P GAIN WILD-TYPE
  CLUS_1                9                 31
  CLUS_2               20                 23
  CLUS_3                7                 13
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  12P GAIN MUTATED        9     12      3      5
  12P GAIN WILD-TYPE      6     11      4     20
D23V3, multiclass
        clus
vv       12P GAIN MUTATED 12P GAIN WILD-TYPE
  CLUS_1                9                  6
  CLUS_2               12                 11
  CLUS_3                3                  4
  CLUS_4                5                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12P GAIN MUTATED        5      3     21
  12P GAIN WILD-TYPE     22      1     18
D23V4, multiclass
        clus
vv       12P GAIN MUTATED 12P GAIN WILD-TYPE
  CLUS_1                5                 22
  CLUS_2                3                  1
  CLUS_3               21                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12P GAIN MUTATED       18      6      6
  12P GAIN WILD-TYPE     12      8     22
D23V5, multiclass
        clus
vv       12P GAIN MUTATED 12P GAIN WILD-TYPE
  CLUS_1               18                 12
  CLUS_2                6                  8
  CLUS_3                6                 22
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12P GAIN MUTATED        0      6     24
  12P GAIN WILD-TYPE      1     22     19
D23V6, multiclass
        clus
vv       12P GAIN MUTATED 12P GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                6                 22
  CLUS_3               24                 19
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  12P GAIN MUTATED        5      6     13      6
  12P GAIN WILD-TYPE      7      3     12     20
D23V7, multiclass
        clus
vv       12P GAIN MUTATED 12P GAIN WILD-TYPE
  CLUS_1                5                  7
  CLUS_2                6                  3
  CLUS_3               13                 12
  CLUS_4                6                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12P GAIN MUTATED        0      6     24
  12P GAIN WILD-TYPE      1     22     19
D23V8, multiclass
        clus
vv       12P GAIN MUTATED 12P GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                6                 22
  CLUS_3               24                 19

Clustering(24) Variable = 12Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12Q GAIN MUTATED        2     11      8
  12Q GAIN WILD-TYPE     36     28     18
D24V1, multiclass
        clus
vv       12Q GAIN MUTATED 12Q GAIN WILD-TYPE
  CLUS_1                2                 36
  CLUS_2               11                 28
  CLUS_3                8                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12Q GAIN MUTATED        7     12      2
  12Q GAIN WILD-TYPE     33     31     18
D24V2, multiclass
        clus
vv       12Q GAIN MUTATED 12Q GAIN WILD-TYPE
  CLUS_1                7                 33
  CLUS_2               12                 31
  CLUS_3                2                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  12Q GAIN MUTATED        5      7      1      4
  12Q GAIN WILD-TYPE     10     16      6     21
D24V3, multiclass
        clus
vv       12Q GAIN MUTATED 12Q GAIN WILD-TYPE
  CLUS_1                5                 10
  CLUS_2                7                 16
  CLUS_3                1                  6
  CLUS_4                4                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12Q GAIN MUTATED        4      3     10
  12Q GAIN WILD-TYPE     23      1     29
D24V4, multiclass
        clus
vv       12Q GAIN MUTATED 12Q GAIN WILD-TYPE
  CLUS_1                4                 23
  CLUS_2                3                  1
  CLUS_3               10                 29
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12Q GAIN MUTATED       10      3      4
  12Q GAIN WILD-TYPE     20     11     24
D24V5, multiclass
        clus
vv       12Q GAIN MUTATED 12Q GAIN WILD-TYPE
  CLUS_1               10                 20
  CLUS_2                3                 11
  CLUS_3                4                 24
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12Q GAIN MUTATED        0      4     13
  12Q GAIN WILD-TYPE      1     24     30
D24V6, multiclass
        clus
vv       12Q GAIN MUTATED 12Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                4                 24
  CLUS_3               13                 30
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  12Q GAIN MUTATED        4      3      6      4
  12Q GAIN WILD-TYPE      8      6     19     22
D24V7, multiclass
        clus
vv       12Q GAIN MUTATED 12Q GAIN WILD-TYPE
  CLUS_1                4                  8
  CLUS_2                3                  6
  CLUS_3                6                 19
  CLUS_4                4                 22
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12Q GAIN MUTATED        0      4     13
  12Q GAIN WILD-TYPE      1     24     30
D24V8, multiclass
        clus
vv       12Q GAIN MUTATED 12Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                4                 24
  CLUS_3               13                 30

Clustering(25) Variable = 13Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q GAIN MUTATED       16      2      6
  13Q GAIN WILD-TYPE     22     37     20
D25V1, multiclass
        clus
vv       13Q GAIN MUTATED 13Q GAIN WILD-TYPE
  CLUS_1               16                 22
  CLUS_2                2                 37
  CLUS_3                6                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q GAIN MUTATED       17      4      3
  13Q GAIN WILD-TYPE     23     39     17
D25V2, multiclass
        clus
vv       13Q GAIN MUTATED 13Q GAIN WILD-TYPE
  CLUS_1               17                 23
  CLUS_2                4                 39
  CLUS_3                3                 17
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  13Q GAIN MUTATED        0      2      3      9
  13Q GAIN WILD-TYPE     15     21      4     16
D25V3, multiclass
        clus
vv       13Q GAIN MUTATED 13Q GAIN WILD-TYPE
  CLUS_1                0                 15
  CLUS_2                2                 21
  CLUS_3                3                  4
  CLUS_4                9                 16
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q GAIN MUTATED       11      0      3
  13Q GAIN WILD-TYPE     16      4     36
D25V4, multiclass
        clus
vv       13Q GAIN MUTATED 13Q GAIN WILD-TYPE
  CLUS_1               11                 16
  CLUS_2                0                  4
  CLUS_3                3                 36
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q GAIN MUTATED        2      1     12
  13Q GAIN WILD-TYPE     28     13     16
D25V5, multiclass
        clus
vv       13Q GAIN MUTATED 13Q GAIN WILD-TYPE
  CLUS_1                2                 28
  CLUS_2                1                 13
  CLUS_3               12                 16
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q GAIN MUTATED        0     12      3
  13Q GAIN WILD-TYPE      1     16     40
D25V6, multiclass
        clus
vv       13Q GAIN MUTATED 13Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               12                 16
  CLUS_3                3                 40
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  13Q GAIN MUTATED        1      0      2     12
  13Q GAIN WILD-TYPE     11      9     23     14
D25V7, multiclass
        clus
vv       13Q GAIN MUTATED 13Q GAIN WILD-TYPE
  CLUS_1                1                 11
  CLUS_2                0                  9
  CLUS_3                2                 23
  CLUS_4               12                 14
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q GAIN MUTATED        0     12      3
  13Q GAIN WILD-TYPE      1     16     40
D25V8, multiclass
        clus
vv       13Q GAIN MUTATED 13Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               12                 16
  CLUS_3                3                 40

Clustering(26) Variable = 14Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q GAIN MUTATED        6     14      6
  14Q GAIN WILD-TYPE     32     25     20
D26V1, multiclass
        clus
vv       14Q GAIN MUTATED 14Q GAIN WILD-TYPE
  CLUS_1                6                 32
  CLUS_2               14                 25
  CLUS_3                6                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q GAIN MUTATED        6     15      5
  14Q GAIN WILD-TYPE     34     28     15
D26V2, multiclass
        clus
vv       14Q GAIN MUTATED 14Q GAIN WILD-TYPE
  CLUS_1                6                 34
  CLUS_2               15                 28
  CLUS_3                5                 15
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  14Q GAIN MUTATED        3     11      2      6
  14Q GAIN WILD-TYPE     12     12      5     19
D26V3, multiclass
        clus
vv       14Q GAIN MUTATED 14Q GAIN WILD-TYPE
  CLUS_1                3                 12
  CLUS_2               11                 12
  CLUS_3                2                  5
  CLUS_4                6                 19
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q GAIN MUTATED        6      1     15
  14Q GAIN WILD-TYPE     21      3     24
D26V4, multiclass
        clus
vv       14Q GAIN MUTATED 14Q GAIN WILD-TYPE
  CLUS_1                6                 21
  CLUS_2                1                  3
  CLUS_3               15                 24
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q GAIN MUTATED       11      4      6
  14Q GAIN WILD-TYPE     19     10     22
D26V5, multiclass
        clus
vv       14Q GAIN MUTATED 14Q GAIN WILD-TYPE
  CLUS_1               11                 19
  CLUS_2                4                 10
  CLUS_3                6                 22
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q GAIN MUTATED        0      6     15
  14Q GAIN WILD-TYPE      1     22     28
D26V6, multiclass
        clus
vv       14Q GAIN MUTATED 14Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                6                 22
  CLUS_3               15                 28
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  14Q GAIN MUTATED        3      1     11      6
  14Q GAIN WILD-TYPE      9      8     14     20
D26V7, multiclass
        clus
vv       14Q GAIN MUTATED 14Q GAIN WILD-TYPE
  CLUS_1                3                  9
  CLUS_2                1                  8
  CLUS_3               11                 14
  CLUS_4                6                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q GAIN MUTATED        0      6     15
  14Q GAIN WILD-TYPE      1     22     28
D26V8, multiclass
        clus
vv       14Q GAIN MUTATED 14Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                6                 22
  CLUS_3               15                 28

Clustering(27) Variable = 15Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q GAIN MUTATED        7      6      6
  15Q GAIN WILD-TYPE     31     33     20
D27V1, multiclass
        clus
vv       15Q GAIN MUTATED 15Q GAIN WILD-TYPE
  CLUS_1                7                 31
  CLUS_2                6                 33
  CLUS_3                6                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q GAIN MUTATED       12      6      1
  15Q GAIN WILD-TYPE     28     37     19
D27V2, multiclass
        clus
vv       15Q GAIN MUTATED 15Q GAIN WILD-TYPE
  CLUS_1               12                 28
  CLUS_2                6                 37
  CLUS_3                1                 19
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  15Q GAIN MUTATED        1      3      2      5
  15Q GAIN WILD-TYPE     14     20      5     20
D27V3, multiclass
        clus
vv       15Q GAIN MUTATED 15Q GAIN WILD-TYPE
  CLUS_1                1                 14
  CLUS_2                3                 20
  CLUS_3                2                  5
  CLUS_4                5                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q GAIN MUTATED        6      1      4
  15Q GAIN WILD-TYPE     21      3     35
D27V4, multiclass
        clus
vv       15Q GAIN MUTATED 15Q GAIN WILD-TYPE
  CLUS_1                6                 21
  CLUS_2                1                  3
  CLUS_3                4                 35
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q GAIN MUTATED        5      0      6
  15Q GAIN WILD-TYPE     25     14     22
D27V5, multiclass
        clus
vv       15Q GAIN MUTATED 15Q GAIN WILD-TYPE
  CLUS_1                5                 25
  CLUS_2                0                 14
  CLUS_3                6                 22
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q GAIN MUTATED        0      6      5
  15Q GAIN WILD-TYPE      1     22     38
D27V6, multiclass
        clus
vv       15Q GAIN MUTATED 15Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                6                 22
  CLUS_3                5                 38
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  15Q GAIN MUTATED        1      1      3      6
  15Q GAIN WILD-TYPE     11      8     22     20
D27V7, multiclass
        clus
vv       15Q GAIN MUTATED 15Q GAIN WILD-TYPE
  CLUS_1                1                 11
  CLUS_2                1                  8
  CLUS_3                3                 22
  CLUS_4                6                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q GAIN MUTATED        0      6      5
  15Q GAIN WILD-TYPE      1     22     38
D27V8, multiclass
        clus
vv       15Q GAIN MUTATED 15Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                6                 22
  CLUS_3                5                 38

Clustering(28) Variable = 16P GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P GAIN MUTATED        4     13      3
  16P GAIN WILD-TYPE     34     26     23
D28V1, multiclass
        clus
vv       16P GAIN MUTATED 16P GAIN WILD-TYPE
  CLUS_1                4                 34
  CLUS_2               13                 26
  CLUS_3                3                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P GAIN MUTATED        5     11      4
  16P GAIN WILD-TYPE     35     32     16
D28V2, multiclass
        clus
vv       16P GAIN MUTATED 16P GAIN WILD-TYPE
  CLUS_1                5                 35
  CLUS_2               11                 32
  CLUS_3                4                 16
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16P GAIN MUTATED        2     11      1      3
  16P GAIN WILD-TYPE     13     12      6     22
D28V3, multiclass
        clus
vv       16P GAIN MUTATED 16P GAIN WILD-TYPE
  CLUS_1                2                 13
  CLUS_2               11                 12
  CLUS_3                1                  6
  CLUS_4                3                 22
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P GAIN MUTATED        3      0     14
  16P GAIN WILD-TYPE     24      4     25
D28V4, multiclass
        clus
vv       16P GAIN MUTATED 16P GAIN WILD-TYPE
  CLUS_1                3                 24
  CLUS_2                0                  4
  CLUS_3               14                 25
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P GAIN MUTATED       10      4      3
  16P GAIN WILD-TYPE     20     10     25
D28V5, multiclass
        clus
vv       16P GAIN MUTATED 16P GAIN WILD-TYPE
  CLUS_1               10                 20
  CLUS_2                4                 10
  CLUS_3                3                 25
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P GAIN MUTATED        0      3     14
  16P GAIN WILD-TYPE      1     25     29
D28V6, multiclass
        clus
vv       16P GAIN MUTATED 16P GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                3                 25
  CLUS_3               14                 29
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16P GAIN MUTATED        4      2      9      2
  16P GAIN WILD-TYPE      8      7     16     24
D28V7, multiclass
        clus
vv       16P GAIN MUTATED 16P GAIN WILD-TYPE
  CLUS_1                4                  8
  CLUS_2                2                  7
  CLUS_3                9                 16
  CLUS_4                2                 24
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P GAIN MUTATED        0      3     14
  16P GAIN WILD-TYPE      1     25     29
D28V8, multiclass
        clus
vv       16P GAIN MUTATED 16P GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                3                 25
  CLUS_3               14                 29

Clustering(29) Variable = 16Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q GAIN MUTATED        4     11      1
  16Q GAIN WILD-TYPE     34     28     25
D29V1, multiclass
        clus
vv       16Q GAIN MUTATED 16Q GAIN WILD-TYPE
  CLUS_1                4                 34
  CLUS_2               11                 28
  CLUS_3                1                 25
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q GAIN MUTATED        3     10      3
  16Q GAIN WILD-TYPE     37     33     17
D29V2, multiclass
        clus
vv       16Q GAIN MUTATED 16Q GAIN WILD-TYPE
  CLUS_1                3                 37
  CLUS_2               10                 33
  CLUS_3                3                 17
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16Q GAIN MUTATED        1     11      0      2
  16Q GAIN WILD-TYPE     14     12      7     23
D29V3, multiclass
        clus
vv       16Q GAIN MUTATED 16Q GAIN WILD-TYPE
  CLUS_1                1                 14
  CLUS_2               11                 12
  CLUS_3                0                  7
  CLUS_4                2                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q GAIN MUTATED        2      0     12
  16Q GAIN WILD-TYPE     25      4     27
D29V4, multiclass
        clus
vv       16Q GAIN MUTATED 16Q GAIN WILD-TYPE
  CLUS_1                2                 25
  CLUS_2                0                  4
  CLUS_3               12                 27
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q GAIN MUTATED       10      2      2
  16Q GAIN WILD-TYPE     20     12     26
D29V5, multiclass
        clus
vv       16Q GAIN MUTATED 16Q GAIN WILD-TYPE
  CLUS_1               10                 20
  CLUS_2                2                 12
  CLUS_3                2                 26
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q GAIN MUTATED        0      2     12
  16Q GAIN WILD-TYPE      1     26     31
D29V6, multiclass
        clus
vv       16Q GAIN MUTATED 16Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                2                 26
  CLUS_3               12                 31
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16Q GAIN MUTATED        2      0     10      2
  16Q GAIN WILD-TYPE     10      9     15     24
D29V7, multiclass
        clus
vv       16Q GAIN MUTATED 16Q GAIN WILD-TYPE
  CLUS_1                2                 10
  CLUS_2                0                  9
  CLUS_3               10                 15
  CLUS_4                2                 24
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q GAIN MUTATED        0      2     12
  16Q GAIN WILD-TYPE      1     26     31
D29V8, multiclass
        clus
vv       16Q GAIN MUTATED 16Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                2                 26
  CLUS_3               12                 31

Clustering(30) Variable = 17P GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P GAIN MUTATED        2      9      8
  17P GAIN WILD-TYPE     36     30     18
D30V1, multiclass
        clus
vv       17P GAIN MUTATED 17P GAIN WILD-TYPE
  CLUS_1                2                 36
  CLUS_2                9                 30
  CLUS_3                8                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P GAIN MUTATED        6     12      1
  17P GAIN WILD-TYPE     34     31     19
D30V2, multiclass
        clus
vv       17P GAIN MUTATED 17P GAIN WILD-TYPE
  CLUS_1                6                 34
  CLUS_2               12                 31
  CLUS_3                1                 19
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  17P GAIN MUTATED        3      7      0      5
  17P GAIN WILD-TYPE     12     16      7     20
D30V3, multiclass
        clus
vv       17P GAIN MUTATED 17P GAIN WILD-TYPE
  CLUS_1                3                 12
  CLUS_2                7                 16
  CLUS_3                0                  7
  CLUS_4                5                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P GAIN MUTATED        5      1      9
  17P GAIN WILD-TYPE     22      3     30
D30V4, multiclass
        clus
vv       17P GAIN MUTATED 17P GAIN WILD-TYPE
  CLUS_1                5                 22
  CLUS_2                1                  3
  CLUS_3                9                 30
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P GAIN MUTATED        8      2      5
  17P GAIN WILD-TYPE     22     12     23
D30V5, multiclass
        clus
vv       17P GAIN MUTATED 17P GAIN WILD-TYPE
  CLUS_1                8                 22
  CLUS_2                2                 12
  CLUS_3                5                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P GAIN MUTATED        0      5     10
  17P GAIN WILD-TYPE      1     23     33
D30V6, multiclass
        clus
vv       17P GAIN MUTATED 17P GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                5                 23
  CLUS_3               10                 33
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  17P GAIN MUTATED        2      2      7      4
  17P GAIN WILD-TYPE     10      7     18     22
D30V7, multiclass
        clus
vv       17P GAIN MUTATED 17P GAIN WILD-TYPE
  CLUS_1                2                 10
  CLUS_2                2                  7
  CLUS_3                7                 18
  CLUS_4                4                 22
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P GAIN MUTATED        0      5     10
  17P GAIN WILD-TYPE      1     23     33
D30V8, multiclass
        clus
vv       17P GAIN MUTATED 17P GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                5                 23
  CLUS_3               10                 33

Clustering(31) Variable = 17Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17Q GAIN MUTATED        3     10     11
  17Q GAIN WILD-TYPE     35     29     15
D31V1, multiclass
        clus
vv       17Q GAIN MUTATED 17Q GAIN WILD-TYPE
  CLUS_1                3                 35
  CLUS_2               10                 29
  CLUS_3               11                 15
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17Q GAIN MUTATED       11     11      2
  17Q GAIN WILD-TYPE     29     32     18
D31V2, multiclass
        clus
vv       17Q GAIN MUTATED 17Q GAIN WILD-TYPE
  CLUS_1               11                 29
  CLUS_2               11                 32
  CLUS_3                2                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  17Q GAIN MUTATED        3      6      1     10
  17Q GAIN WILD-TYPE     12     17      6     15
D31V3, multiclass
        clus
vv       17Q GAIN MUTATED 17Q GAIN WILD-TYPE
  CLUS_1                3                 12
  CLUS_2                6                 17
  CLUS_3                1                  6
  CLUS_4               10                 15
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17Q GAIN MUTATED       10      1      9
  17Q GAIN WILD-TYPE     17      3     30
D31V4, multiclass
        clus
vv       17Q GAIN MUTATED 17Q GAIN WILD-TYPE
  CLUS_1               10                 17
  CLUS_2                1                  3
  CLUS_3                9                 30
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17Q GAIN MUTATED        8      2     10
  17Q GAIN WILD-TYPE     22     12     18
D31V5, multiclass
        clus
vv       17Q GAIN MUTATED 17Q GAIN WILD-TYPE
  CLUS_1                8                 22
  CLUS_2                2                 12
  CLUS_3               10                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17Q GAIN MUTATED        0     10     10
  17Q GAIN WILD-TYPE      1     18     33
D31V6, multiclass
        clus
vv       17Q GAIN MUTATED 17Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               10                 18
  CLUS_3               10                 33
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  17Q GAIN MUTATED        2      2      7      9
  17Q GAIN WILD-TYPE     10      7     18     17
D31V7, multiclass
        clus
vv       17Q GAIN MUTATED 17Q GAIN WILD-TYPE
  CLUS_1                2                 10
  CLUS_2                2                  7
  CLUS_3                7                 18
  CLUS_4                9                 17
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17Q GAIN MUTATED        0     10     10
  17Q GAIN WILD-TYPE      1     18     33
D31V8, multiclass
        clus
vv       17Q GAIN MUTATED 17Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               10                 18
  CLUS_3               10                 33

Clustering(32) Variable = 18P GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P GAIN MUTATED        4     13     11
  18P GAIN WILD-TYPE     34     26     15
D32V1, multiclass
        clus
vv       18P GAIN MUTATED 18P GAIN WILD-TYPE
  CLUS_1                4                 34
  CLUS_2               13                 26
  CLUS_3               11                 15
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P GAIN MUTATED        8     15      5
  18P GAIN WILD-TYPE     32     28     15
D32V2, multiclass
        clus
vv       18P GAIN MUTATED 18P GAIN WILD-TYPE
  CLUS_1                8                 32
  CLUS_2               15                 28
  CLUS_3                5                 15
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18P GAIN MUTATED        4     11      2      7
  18P GAIN WILD-TYPE     11     12      5     18
D32V3, multiclass
        clus
vv       18P GAIN MUTATED 18P GAIN WILD-TYPE
  CLUS_1                4                 11
  CLUS_2               11                 12
  CLUS_3                2                  5
  CLUS_4                7                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P GAIN MUTATED        7      1     16
  18P GAIN WILD-TYPE     20      3     23
D32V4, multiclass
        clus
vv       18P GAIN MUTATED 18P GAIN WILD-TYPE
  CLUS_1                7                 20
  CLUS_2                1                  3
  CLUS_3               16                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P GAIN MUTATED       12      4      7
  18P GAIN WILD-TYPE     18     10     21
D32V5, multiclass
        clus
vv       18P GAIN MUTATED 18P GAIN WILD-TYPE
  CLUS_1               12                 18
  CLUS_2                4                 10
  CLUS_3                7                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P GAIN MUTATED        0      7     16
  18P GAIN WILD-TYPE      1     21     27
D32V6, multiclass
        clus
vv       18P GAIN MUTATED 18P GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                7                 21
  CLUS_3               16                 27
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18P GAIN MUTATED        4      2     11      6
  18P GAIN WILD-TYPE      8      7     14     20
D32V7, multiclass
        clus
vv       18P GAIN MUTATED 18P GAIN WILD-TYPE
  CLUS_1                4                  8
  CLUS_2                2                  7
  CLUS_3               11                 14
  CLUS_4                6                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P GAIN MUTATED        0      7     16
  18P GAIN WILD-TYPE      1     21     27
D32V8, multiclass
        clus
vv       18P GAIN MUTATED 18P GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                7                 21
  CLUS_3               16                 27

Clustering(33) Variable = 18Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q GAIN MUTATED        5      4      5
  18Q GAIN WILD-TYPE     33     35     21
D33V1, multiclass
        clus
vv       18Q GAIN MUTATED 18Q GAIN WILD-TYPE
  CLUS_1                5                 33
  CLUS_2                4                 35
  CLUS_3                5                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q GAIN MUTATED        6      5      3
  18Q GAIN WILD-TYPE     34     38     17
D33V2, multiclass
        clus
vv       18Q GAIN MUTATED 18Q GAIN WILD-TYPE
  CLUS_1                6                 34
  CLUS_2                5                 38
  CLUS_3                3                 17
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18Q GAIN MUTATED        3      3      0      4
  18Q GAIN WILD-TYPE     12     20      7     21
D33V3, multiclass
        clus
vv       18Q GAIN MUTATED 18Q GAIN WILD-TYPE
  CLUS_1                3                 12
  CLUS_2                3                 20
  CLUS_3                0                  7
  CLUS_4                4                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q GAIN MUTATED        4      1      5
  18Q GAIN WILD-TYPE     23      3     34
D33V4, multiclass
        clus
vv       18Q GAIN MUTATED 18Q GAIN WILD-TYPE
  CLUS_1                4                 23
  CLUS_2                1                  3
  CLUS_3                5                 34
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q GAIN MUTATED        3      2      4
  18Q GAIN WILD-TYPE     27     12     24
D33V5, multiclass
        clus
vv       18Q GAIN MUTATED 18Q GAIN WILD-TYPE
  CLUS_1                3                 27
  CLUS_2                2                 12
  CLUS_3                4                 24
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q GAIN MUTATED        0      4      5
  18Q GAIN WILD-TYPE      1     24     38
D33V6, multiclass
        clus
vv       18Q GAIN MUTATED 18Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                4                 24
  CLUS_3                5                 38
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18Q GAIN MUTATED        2      1      3      3
  18Q GAIN WILD-TYPE     10      8     22     23
D33V7, multiclass
        clus
vv       18Q GAIN MUTATED 18Q GAIN WILD-TYPE
  CLUS_1                2                 10
  CLUS_2                1                  8
  CLUS_3                3                 22
  CLUS_4                3                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q GAIN MUTATED        0      4      5
  18Q GAIN WILD-TYPE      1     24     38
D33V8, multiclass
        clus
vv       18Q GAIN MUTATED 18Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                4                 24
  CLUS_3                5                 38

Clustering(34) Variable = 19P GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P GAIN MUTATED        2      5      8
  19P GAIN WILD-TYPE     36     34     18
D34V1, multiclass
        clus
vv       19P GAIN MUTATED 19P GAIN WILD-TYPE
  CLUS_1                2                 36
  CLUS_2                5                 34
  CLUS_3                8                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P GAIN MUTATED        6      8      1
  19P GAIN WILD-TYPE     34     35     19
D34V2, multiclass
        clus
vv       19P GAIN MUTATED 19P GAIN WILD-TYPE
  CLUS_1                6                 34
  CLUS_2                8                 35
  CLUS_3                1                 19
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19P GAIN MUTATED        2      4      1      5
  19P GAIN WILD-TYPE     13     19      6     20
D34V3, multiclass
        clus
vv       19P GAIN MUTATED 19P GAIN WILD-TYPE
  CLUS_1                2                 13
  CLUS_2                4                 19
  CLUS_3                1                  6
  CLUS_4                5                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P GAIN MUTATED        5      1      6
  19P GAIN WILD-TYPE     22      3     33
D34V4, multiclass
        clus
vv       19P GAIN MUTATED 19P GAIN WILD-TYPE
  CLUS_1                5                 22
  CLUS_2                1                  3
  CLUS_3                6                 33
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P GAIN MUTATED        5      1      5
  19P GAIN WILD-TYPE     25     13     23
D34V5, multiclass
        clus
vv       19P GAIN MUTATED 19P GAIN WILD-TYPE
  CLUS_1                5                 25
  CLUS_2                1                 13
  CLUS_3                5                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P GAIN MUTATED        0      5      6
  19P GAIN WILD-TYPE      1     23     37
D34V6, multiclass
        clus
vv       19P GAIN MUTATED 19P GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                5                 23
  CLUS_3                6                 37
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19P GAIN MUTATED        0      2      4      5
  19P GAIN WILD-TYPE     12      7     21     21
D34V7, multiclass
        clus
vv       19P GAIN MUTATED 19P GAIN WILD-TYPE
  CLUS_1                0                 12
  CLUS_2                2                  7
  CLUS_3                4                 21
  CLUS_4                5                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P GAIN MUTATED        0      5      6
  19P GAIN WILD-TYPE      1     23     37
D34V8, multiclass
        clus
vv       19P GAIN MUTATED 19P GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                5                 23
  CLUS_3                6                 37

Clustering(35) Variable = 19Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q GAIN MUTATED        3      5     11
  19Q GAIN WILD-TYPE     35     34     15
D35V1, multiclass
        clus
vv       19Q GAIN MUTATED 19Q GAIN WILD-TYPE
  CLUS_1                3                 35
  CLUS_2                5                 34
  CLUS_3               11                 15
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q GAIN MUTATED       11      7      1
  19Q GAIN WILD-TYPE     29     36     19
D35V2, multiclass
        clus
vv       19Q GAIN MUTATED 19Q GAIN WILD-TYPE
  CLUS_1               11                 29
  CLUS_2                7                 36
  CLUS_3                1                 19
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19Q GAIN MUTATED        1      5      1      9
  19Q GAIN WILD-TYPE     14     18      6     16
D35V3, multiclass
        clus
vv       19Q GAIN MUTATED 19Q GAIN WILD-TYPE
  CLUS_1                1                 14
  CLUS_2                5                 18
  CLUS_3                1                  6
  CLUS_4                9                 16
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q GAIN MUTATED       10      0      6
  19Q GAIN WILD-TYPE     17      4     33
D35V4, multiclass
        clus
vv       19Q GAIN MUTATED 19Q GAIN WILD-TYPE
  CLUS_1               10                 17
  CLUS_2                0                  4
  CLUS_3                6                 33
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q GAIN MUTATED        5      1     10
  19Q GAIN WILD-TYPE     25     13     18
D35V5, multiclass
        clus
vv       19Q GAIN MUTATED 19Q GAIN WILD-TYPE
  CLUS_1                5                 25
  CLUS_2                1                 13
  CLUS_3               10                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q GAIN MUTATED        0     10      6
  19Q GAIN WILD-TYPE      1     18     37
D35V6, multiclass
        clus
vv       19Q GAIN MUTATED 19Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               10                 18
  CLUS_3                6                 37
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19Q GAIN MUTATED        0      4      4      8
  19Q GAIN WILD-TYPE     12      5     21     18
D35V7, multiclass
        clus
vv       19Q GAIN MUTATED 19Q GAIN WILD-TYPE
  CLUS_1                0                 12
  CLUS_2                4                  5
  CLUS_3                4                 21
  CLUS_4                8                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q GAIN MUTATED        0     10      6
  19Q GAIN WILD-TYPE      1     18     37
D35V8, multiclass
        clus
vv       19Q GAIN MUTATED 19Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               10                 18
  CLUS_3                6                 37

Clustering(36) Variable = 20P GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20P GAIN MUTATED       17     20     16
  20P GAIN WILD-TYPE     21     19     10
D36V1, multiclass
        clus
vv       20P GAIN MUTATED 20P GAIN WILD-TYPE
  CLUS_1               17                 21
  CLUS_2               20                 19
  CLUS_3               16                 10
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20P GAIN MUTATED       25     20      8
  20P GAIN WILD-TYPE     15     23     12
D36V2, multiclass
        clus
vv       20P GAIN MUTATED 20P GAIN WILD-TYPE
  CLUS_1               25                 15
  CLUS_2               20                 23
  CLUS_3                8                 12
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  20P GAIN MUTATED        6     12      4     16
  20P GAIN WILD-TYPE      9     11      3      9
D36V3, multiclass
        clus
vv       20P GAIN MUTATED 20P GAIN WILD-TYPE
  CLUS_1                6                  9
  CLUS_2               12                 11
  CLUS_3                4                  3
  CLUS_4               16                  9
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20P GAIN MUTATED       17      1     20
  20P GAIN WILD-TYPE     10      3     19
D36V4, multiclass
        clus
vv       20P GAIN MUTATED 20P GAIN WILD-TYPE
  CLUS_1               17                 10
  CLUS_2                1                  3
  CLUS_3               20                 19
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20P GAIN MUTATED       17      6     17
  20P GAIN WILD-TYPE     13      8     11
D36V5, multiclass
        clus
vv       20P GAIN MUTATED 20P GAIN WILD-TYPE
  CLUS_1               17                 13
  CLUS_2                6                  8
  CLUS_3               17                 11
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20P GAIN MUTATED        0     17     23
  20P GAIN WILD-TYPE      1     11     20
D36V6, multiclass
        clus
vv       20P GAIN MUTATED 20P GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               17                 11
  CLUS_3               23                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  20P GAIN MUTATED        7      5     12     16
  20P GAIN WILD-TYPE      5      4     13     10
D36V7, multiclass
        clus
vv       20P GAIN MUTATED 20P GAIN WILD-TYPE
  CLUS_1                7                  5
  CLUS_2                5                  4
  CLUS_3               12                 13
  CLUS_4               16                 10
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20P GAIN MUTATED        0     17     23
  20P GAIN WILD-TYPE      1     11     20
D36V8, multiclass
        clus
vv       20P GAIN MUTATED 20P GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               17                 11
  CLUS_3               23                 20

Clustering(37) Variable = 20Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20Q GAIN MUTATED       20     20     20
  20Q GAIN WILD-TYPE     18     19      6
D37V1, multiclass
        clus
vv       20Q GAIN MUTATED 20Q GAIN WILD-TYPE
  CLUS_1               20                 18
  CLUS_2               20                 19
  CLUS_3               20                  6
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20Q GAIN MUTATED       30     20     10
  20Q GAIN WILD-TYPE     10     23     10
D37V2, multiclass
        clus
vv       20Q GAIN MUTATED 20Q GAIN WILD-TYPE
  CLUS_1               30                 10
  CLUS_2               20                 23
  CLUS_3               10                 10
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  20Q GAIN MUTATED        7     10      4     19
  20Q GAIN WILD-TYPE      8     13      3      6
D37V3, multiclass
        clus
vv       20Q GAIN MUTATED 20Q GAIN WILD-TYPE
  CLUS_1                7                  8
  CLUS_2               10                 13
  CLUS_3                4                  3
  CLUS_4               19                  6
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20Q GAIN MUTATED       20      2     18
  20Q GAIN WILD-TYPE      7      2     21
D37V4, multiclass
        clus
vv       20Q GAIN MUTATED 20Q GAIN WILD-TYPE
  CLUS_1               20                  7
  CLUS_2                2                  2
  CLUS_3               18                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20Q GAIN MUTATED       15      6     20
  20Q GAIN WILD-TYPE     15      8      8
D37V5, multiclass
        clus
vv       20Q GAIN MUTATED 20Q GAIN WILD-TYPE
  CLUS_1               15                 15
  CLUS_2                6                  8
  CLUS_3               20                  8
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20Q GAIN MUTATED        0     20     21
  20Q GAIN WILD-TYPE      1      8     22
D37V6, multiclass
        clus
vv       20Q GAIN MUTATED 20Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               20                  8
  CLUS_3               21                 22
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  20Q GAIN MUTATED        7      5     11     18
  20Q GAIN WILD-TYPE      5      4     14      8
D37V7, multiclass
        clus
vv       20Q GAIN MUTATED 20Q GAIN WILD-TYPE
  CLUS_1                7                  5
  CLUS_2                5                  4
  CLUS_3               11                 14
  CLUS_4               18                  8
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20Q GAIN MUTATED        0     20     21
  20Q GAIN WILD-TYPE      1      8     22
D37V8, multiclass
        clus
vv       20Q GAIN MUTATED 20Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               20                  8
  CLUS_3               21                 22

Clustering(38) Variable = 21Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q GAIN MUTATED        2      3      3
  21Q GAIN WILD-TYPE     36     36     23
D38V1, multiclass
        clus
vv       21Q GAIN MUTATED 21Q GAIN WILD-TYPE
  CLUS_1                2                 36
  CLUS_2                3                 36
  CLUS_3                3                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q GAIN MUTATED        2      4      2
  21Q GAIN WILD-TYPE     38     39     18
D38V2, multiclass
        clus
vv       21Q GAIN MUTATED 21Q GAIN WILD-TYPE
  CLUS_1                2                 38
  CLUS_2                4                 39
  CLUS_3                2                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  21Q GAIN MUTATED        3      2      0      2
  21Q GAIN WILD-TYPE     12     21      7     23
D38V3, multiclass
        clus
vv       21Q GAIN MUTATED 21Q GAIN WILD-TYPE
  CLUS_1                3                 12
  CLUS_2                2                 21
  CLUS_3                0                  7
  CLUS_4                2                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q GAIN MUTATED        2      2      3
  21Q GAIN WILD-TYPE     25      2     36
D38V4, multiclass
        clus
vv       21Q GAIN MUTATED 21Q GAIN WILD-TYPE
  CLUS_1                2                 25
  CLUS_2                2                  2
  CLUS_3                3                 36
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q GAIN MUTATED        3      2      2
  21Q GAIN WILD-TYPE     27     12     26
D38V5, multiclass
        clus
vv       21Q GAIN MUTATED 21Q GAIN WILD-TYPE
  CLUS_1                3                 27
  CLUS_2                2                 12
  CLUS_3                2                 26
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q GAIN MUTATED        0      2      5
  21Q GAIN WILD-TYPE      1     26     38
D38V6, multiclass
        clus
vv       21Q GAIN MUTATED 21Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                2                 26
  CLUS_3                5                 38
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  21Q GAIN MUTATED        1      3      2      1
  21Q GAIN WILD-TYPE     11      6     23     25
D38V7, multiclass
        clus
vv       21Q GAIN MUTATED 21Q GAIN WILD-TYPE
  CLUS_1                1                 11
  CLUS_2                3                  6
  CLUS_3                2                 23
  CLUS_4                1                 25
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q GAIN MUTATED        0      2      5
  21Q GAIN WILD-TYPE      1     26     38
D38V8, multiclass
        clus
vv       21Q GAIN MUTATED 21Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                2                 26
  CLUS_3                5                 38

Clustering(39) Variable = 22Q GAIN MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  22Q GAIN MUTATED        3     14      2
  22Q GAIN WILD-TYPE     35     25     24
D39V1, multiclass
        clus
vv       22Q GAIN MUTATED 22Q GAIN WILD-TYPE
  CLUS_1                3                 35
  CLUS_2               14                 25
  CLUS_3                2                 24
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  22Q GAIN MUTATED        1     16      2
  22Q GAIN WILD-TYPE     39     27     18
D39V2, multiclass
        clus
vv       22Q GAIN MUTATED 22Q GAIN WILD-TYPE
  CLUS_1                1                 39
  CLUS_2               16                 27
  CLUS_3                2                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  22Q GAIN MUTATED        3     12      1      1
  22Q GAIN WILD-TYPE     12     11      6     24
D39V3, multiclass
        clus
vv       22Q GAIN MUTATED 22Q GAIN WILD-TYPE
  CLUS_1                3                 12
  CLUS_2               12                 11
  CLUS_3                1                  6
  CLUS_4                1                 24
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  22Q GAIN MUTATED        1      0     16
  22Q GAIN WILD-TYPE     26      4     23
D39V4, multiclass
        clus
vv       22Q GAIN MUTATED 22Q GAIN WILD-TYPE
  CLUS_1                1                 26
  CLUS_2                0                  4
  CLUS_3               16                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  22Q GAIN MUTATED       12      4      1
  22Q GAIN WILD-TYPE     18     10     27
D39V5, multiclass
        clus
vv       22Q GAIN MUTATED 22Q GAIN WILD-TYPE
  CLUS_1               12                 18
  CLUS_2                4                 10
  CLUS_3                1                 27
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  22Q GAIN MUTATED        0      1     16
  22Q GAIN WILD-TYPE      1     27     27
D39V6, multiclass
        clus
vv       22Q GAIN MUTATED 22Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                1                 27
  CLUS_3               16                 27
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  22Q GAIN MUTATED        4      2     10      1
  22Q GAIN WILD-TYPE      8      7     15     25
D39V7, multiclass
        clus
vv       22Q GAIN MUTATED 22Q GAIN WILD-TYPE
  CLUS_1                4                  8
  CLUS_2                2                  7
  CLUS_3               10                 15
  CLUS_4                1                 25
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  22Q GAIN MUTATED        0      1     16
  22Q GAIN WILD-TYPE      1     27     27
D39V8, multiclass
        clus
vv       22Q GAIN MUTATED 22Q GAIN WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                1                 27
  CLUS_3               16                 27

Clustering(40) Variable = XQ GAIN MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ GAIN MUTATED        6     11      4
  XQ GAIN WILD-TYPE     32     28     22
D40V1, multiclass
        clus
vv       XQ GAIN MUTATED XQ GAIN WILD-TYPE
  CLUS_1               6                32
  CLUS_2              11                28
  CLUS_3               4                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ GAIN MUTATED        5     12      4
  XQ GAIN WILD-TYPE     35     31     16
D40V2, multiclass
        clus
vv       XQ GAIN MUTATED XQ GAIN WILD-TYPE
  CLUS_1               5                35
  CLUS_2              12                31
  CLUS_3               4                16
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XQ GAIN MUTATED        4      7      1      3
  XQ GAIN WILD-TYPE     11     16      6     22
D40V3, multiclass
        clus
vv       XQ GAIN MUTATED XQ GAIN WILD-TYPE
  CLUS_1               4                11
  CLUS_2               7                16
  CLUS_3               1                 6
  CLUS_4               3                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ GAIN MUTATED        3      1     11
  XQ GAIN WILD-TYPE     24      3     28
D40V4, multiclass
        clus
vv       XQ GAIN MUTATED XQ GAIN WILD-TYPE
  CLUS_1               3                24
  CLUS_2               1                 3
  CLUS_3              11                28
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ GAIN MUTATED        8      4      4
  XQ GAIN WILD-TYPE     22     10     24
D40V5, multiclass
        clus
vv       XQ GAIN MUTATED XQ GAIN WILD-TYPE
  CLUS_1               8                22
  CLUS_2               4                10
  CLUS_3               4                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ GAIN MUTATED        0      4     12
  XQ GAIN WILD-TYPE      1     24     31
D40V6, multiclass
        clus
vv       XQ GAIN MUTATED XQ GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               4                24
  CLUS_3              12                31
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XQ GAIN MUTATED        3      3      6      4
  XQ GAIN WILD-TYPE      9      6     19     22
D40V7, multiclass
        clus
vv       XQ GAIN MUTATED XQ GAIN WILD-TYPE
  CLUS_1               3                 9
  CLUS_2               3                 6
  CLUS_3               6                19
  CLUS_4               4                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ GAIN MUTATED        0      4     12
  XQ GAIN WILD-TYPE      1     24     31
D40V8, multiclass
        clus
vv       XQ GAIN MUTATED XQ GAIN WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               4                24
  CLUS_3              12                31

Clustering(41) Variable = 1P LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P LOSS MUTATED        3      8      8
  1P LOSS WILD-TYPE     35     31     18
D41V1, multiclass
        clus
vv       1P LOSS MUTATED 1P LOSS WILD-TYPE
  CLUS_1               3                35
  CLUS_2               8                31
  CLUS_3               8                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P LOSS MUTATED       11      6      2
  1P LOSS WILD-TYPE     29     37     18
D41V2, multiclass
        clus
vv       1P LOSS MUTATED 1P LOSS WILD-TYPE
  CLUS_1              11                29
  CLUS_2               6                37
  CLUS_3               2                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1P LOSS MUTATED        2      2      1      8
  1P LOSS WILD-TYPE     13     21      6     17
D41V3, multiclass
        clus
vv       1P LOSS MUTATED 1P LOSS WILD-TYPE
  CLUS_1               2                13
  CLUS_2               2                21
  CLUS_3               1                 6
  CLUS_4               8                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P LOSS MUTATED        8      0      5
  1P LOSS WILD-TYPE     19      4     34
D41V4, multiclass
        clus
vv       1P LOSS MUTATED 1P LOSS WILD-TYPE
  CLUS_1               8                19
  CLUS_2               0                 4
  CLUS_3               5                34
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P LOSS MUTATED        4      1      8
  1P LOSS WILD-TYPE     26     13     20
D41V5, multiclass
        clus
vv       1P LOSS MUTATED 1P LOSS WILD-TYPE
  CLUS_1               4                26
  CLUS_2               1                13
  CLUS_3               8                20
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P LOSS MUTATED        0      8      5
  1P LOSS WILD-TYPE      1     20     38
D41V6, multiclass
        clus
vv       1P LOSS MUTATED 1P LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               8                20
  CLUS_3               5                38
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1P LOSS MUTATED        2      1      3      7
  1P LOSS WILD-TYPE     10      8     22     19
D41V7, multiclass
        clus
vv       1P LOSS MUTATED 1P LOSS WILD-TYPE
  CLUS_1               2                10
  CLUS_2               1                 8
  CLUS_3               3                22
  CLUS_4               7                19
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1P LOSS MUTATED        0      8      5
  1P LOSS WILD-TYPE      1     20     38
D41V8, multiclass
        clus
vv       1P LOSS MUTATED 1P LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               8                20
  CLUS_3               5                38

Clustering(42) Variable = 1Q LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q LOSS MUTATED        2      2      9
  1Q LOSS WILD-TYPE     36     37     17
D42V1, multiclass
        clus
vv       1Q LOSS MUTATED 1Q LOSS WILD-TYPE
  CLUS_1               2                36
  CLUS_2               2                37
  CLUS_3               9                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q LOSS MUTATED        9      3      1
  1Q LOSS WILD-TYPE     31     40     19
D42V2, multiclass
        clus
vv       1Q LOSS MUTATED 1Q LOSS WILD-TYPE
  CLUS_1               9                31
  CLUS_2               3                40
  CLUS_3               1                19
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1Q LOSS MUTATED        1      2      0      7
  1Q LOSS WILD-TYPE     14     21      7     18
D42V3, multiclass
        clus
vv       1Q LOSS MUTATED 1Q LOSS WILD-TYPE
  CLUS_1               1                14
  CLUS_2               2                21
  CLUS_3               0                 7
  CLUS_4               7                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q LOSS MUTATED        7      0      3
  1Q LOSS WILD-TYPE     20      4     36
D42V4, multiclass
        clus
vv       1Q LOSS MUTATED 1Q LOSS WILD-TYPE
  CLUS_1               7                20
  CLUS_2               0                 4
  CLUS_3               3                36
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q LOSS MUTATED        3      0      7
  1Q LOSS WILD-TYPE     27     14     21
D42V5, multiclass
        clus
vv       1Q LOSS MUTATED 1Q LOSS WILD-TYPE
  CLUS_1               3                27
  CLUS_2               0                14
  CLUS_3               7                21
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q LOSS MUTATED        0      7      3
  1Q LOSS WILD-TYPE      1     21     40
D42V6, multiclass
        clus
vv       1Q LOSS MUTATED 1Q LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               7                21
  CLUS_3               3                40
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1Q LOSS MUTATED        1      1      2      6
  1Q LOSS WILD-TYPE     11      8     23     20
D42V7, multiclass
        clus
vv       1Q LOSS MUTATED 1Q LOSS WILD-TYPE
  CLUS_1               1                11
  CLUS_2               1                 8
  CLUS_3               2                23
  CLUS_4               6                20
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  1Q LOSS MUTATED        0      7      3
  1Q LOSS WILD-TYPE      1     21     40
D42V8, multiclass
        clus
vv       1Q LOSS MUTATED 1Q LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               7                21
  CLUS_3               3                40

Clustering(43) Variable = 2P LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2P LOSS MUTATED        2      3      0
  2P LOSS WILD-TYPE     36     36     26
D43V1, multiclass
        clus
vv       2P LOSS MUTATED 2P LOSS WILD-TYPE
  CLUS_1               2                36
  CLUS_2               3                36
  CLUS_3               0                26
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2P LOSS MUTATED        0      3      2
  2P LOSS WILD-TYPE     40     40     18
D43V2, multiclass
        clus
vv       2P LOSS MUTATED 2P LOSS WILD-TYPE
  CLUS_1               0                40
  CLUS_2               3                40
  CLUS_3               2                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  2P LOSS MUTATED        0      0      1      1
  2P LOSS WILD-TYPE     15     23      6     24
D43V3, multiclass
[1] "Remove cluster labels:" "2P LOSS MUTATED"       
clus
  2P LOSS MUTATED 2P LOSS WILD-TYPE 
                2                68 
       TCGA-IG-A3I8        TCGA-IG-A3QL        TCGA-IG-A3Y9        TCGA-IG-A3YA 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-IG-A4P3        TCGA-IG-A4QS        TCGA-IG-A4QT        TCGA-IG-A50L 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-IG-A5B8        TCGA-IG-A5S3        TCGA-IG-A625        TCGA-L5-A43C 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-L5-A43E        TCGA-L5-A43H        TCGA-L5-A43I        TCGA-L5-A43J 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-L5-A43M        TCGA-L5-A4OE        TCGA-L5-A4OF        TCGA-L5-A4OG 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-L5-A4OH        TCGA-L5-A4OJ        TCGA-L5-A4OM        TCGA-L5-A4ON 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-L5-A4OO        TCGA-L5-A4OP        TCGA-L5-A4OQ        TCGA-L5-A4OR 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-L5-A4OT        TCGA-L5-A4OU        TCGA-L5-A4OW        TCGA-L5-A4OX 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-L7-A56G        TCGA-LN-A49K        TCGA-LN-A49L        TCGA-LN-A49M 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-LN-A49N        TCGA-LN-A49O        TCGA-LN-A49P        TCGA-LN-A49R 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-LN-A49S        TCGA-LN-A49U        TCGA-LN-A49V        TCGA-LN-A49W 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-LN-A49X        TCGA-LN-A49Y        TCGA-LN-A4A1        TCGA-LN-A4A2 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-LN-A4A3        TCGA-LN-A4A4        TCGA-LN-A4A5        TCGA-LN-A4A6 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-LN-A4A8        TCGA-LN-A4A9        TCGA-LN-A4MQ        TCGA-LN-A4MR 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-LN-A5U5        TCGA-LN-A5U6        TCGA-LN-A5U7        TCGA-M9-A5M8 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-Q9-A6FU        TCGA-Q9-A6FW        TCGA-R6-A6DN        TCGA-R6-A6DQ 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-R6-A6KZ        TCGA-R6-A6L4        TCGA-S8-A6BV        TCGA-S8-A6BW 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2P LOSS MUTATED        1      0      1
  2P LOSS WILD-TYPE     26      4     38
D43V4, multiclass
[1] "Remove cluster labels:" "2P LOSS MUTATED"       
clus
  2P LOSS MUTATED 2P LOSS WILD-TYPE 
                2                68 
       TCGA-IG-A3I8        TCGA-IG-A3QL        TCGA-IG-A3Y9        TCGA-IG-A3YA 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-IG-A4P3        TCGA-IG-A4QS        TCGA-IG-A4QT        TCGA-IG-A50L 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-IG-A5B8        TCGA-IG-A5S3        TCGA-IG-A625        TCGA-L5-A43C 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-L5-A43E        TCGA-L5-A43H        TCGA-L5-A43I        TCGA-L5-A43J 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-L5-A43M        TCGA-L5-A4OE        TCGA-L5-A4OF        TCGA-L5-A4OG 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-L5-A4OH        TCGA-L5-A4OJ        TCGA-L5-A4OM        TCGA-L5-A4ON 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-L5-A4OO        TCGA-L5-A4OP        TCGA-L5-A4OQ        TCGA-L5-A4OR 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-L5-A4OT        TCGA-L5-A4OU        TCGA-L5-A4OW        TCGA-L5-A4OX 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-L7-A56G        TCGA-LN-A49K        TCGA-LN-A49L        TCGA-LN-A49M 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-LN-A49N        TCGA-LN-A49O        TCGA-LN-A49P        TCGA-LN-A49R 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-LN-A49S        TCGA-LN-A49U        TCGA-LN-A49V        TCGA-LN-A49W 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-LN-A49X        TCGA-LN-A49Y        TCGA-LN-A4A1        TCGA-LN-A4A2 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-LN-A4A3        TCGA-LN-A4A4        TCGA-LN-A4A5        TCGA-LN-A4A6 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-LN-A4A8        TCGA-LN-A4A9        TCGA-LN-A4MQ        TCGA-LN-A4MR 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-LN-A5U5        TCGA-LN-A5U6        TCGA-LN-A5U7        TCGA-M9-A5M8 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-Q9-A6FU        TCGA-Q9-A6FW        TCGA-R6-A6DN        TCGA-R6-A6DQ 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-R6-A6KZ        TCGA-R6-A6L4        TCGA-S8-A6BV        TCGA-S8-A6BW 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2P LOSS MUTATED        1      1      1
  2P LOSS WILD-TYPE     29     13     27
D43V5, multiclass
        clus
vv       2P LOSS MUTATED 2P LOSS WILD-TYPE
  CLUS_1               1                29
  CLUS_2               1                13
  CLUS_3               1                27
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2P LOSS MUTATED        0      1      2
  2P LOSS WILD-TYPE      1     27     41
D43V6, multiclass
        clus
vv       2P LOSS MUTATED 2P LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               1                27
  CLUS_3               2                41
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  2P LOSS MUTATED        1      0      1      1
  2P LOSS WILD-TYPE     11      9     24     25
D43V7, multiclass
        clus
vv       2P LOSS MUTATED 2P LOSS WILD-TYPE
  CLUS_1               1                11
  CLUS_2               0                 9
  CLUS_3               1                24
  CLUS_4               1                25
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2P LOSS MUTATED        0      1      2
  2P LOSS WILD-TYPE      1     27     41
D43V8, multiclass
        clus
vv       2P LOSS MUTATED 2P LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               1                27
  CLUS_3               2                41

Clustering(44) Variable = 2Q LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2Q LOSS MUTATED        3      6      2
  2Q LOSS WILD-TYPE     35     33     24
D44V1, multiclass
        clus
vv       2Q LOSS MUTATED 2Q LOSS WILD-TYPE
  CLUS_1               3                35
  CLUS_2               6                33
  CLUS_3               2                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2Q LOSS MUTATED        0      6      5
  2Q LOSS WILD-TYPE     40     37     15
D44V2, multiclass
        clus
vv       2Q LOSS MUTATED 2Q LOSS WILD-TYPE
  CLUS_1               0                40
  CLUS_2               6                37
  CLUS_3               5                15
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  2Q LOSS MUTATED        3      1      3      1
  2Q LOSS WILD-TYPE     12     22      4     24
D44V3, multiclass
        clus
vv       2Q LOSS MUTATED 2Q LOSS WILD-TYPE
  CLUS_1               3                12
  CLUS_2               1                22
  CLUS_3               3                 4
  CLUS_4               1                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2Q LOSS MUTATED        1      1      6
  2Q LOSS WILD-TYPE     26      3     33
D44V4, multiclass
        clus
vv       2Q LOSS MUTATED 2Q LOSS WILD-TYPE
  CLUS_1               1                26
  CLUS_2               1                 3
  CLUS_3               6                33
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2Q LOSS MUTATED        5      3      1
  2Q LOSS WILD-TYPE     25     11     27
D44V5, multiclass
        clus
vv       2Q LOSS MUTATED 2Q LOSS WILD-TYPE
  CLUS_1               5                25
  CLUS_2               3                11
  CLUS_3               1                27
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2Q LOSS MUTATED        0      1      8
  2Q LOSS WILD-TYPE      1     27     35
D44V6, multiclass
        clus
vv       2Q LOSS MUTATED 2Q LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               1                27
  CLUS_3               8                35
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  2Q LOSS MUTATED        3      1      4      1
  2Q LOSS WILD-TYPE      9      8     21     25
D44V7, multiclass
        clus
vv       2Q LOSS MUTATED 2Q LOSS WILD-TYPE
  CLUS_1               3                 9
  CLUS_2               1                 8
  CLUS_3               4                21
  CLUS_4               1                25
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  2Q LOSS MUTATED        0      1      8
  2Q LOSS WILD-TYPE      1     27     35
D44V8, multiclass
        clus
vv       2Q LOSS MUTATED 2Q LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               1                27
  CLUS_3               8                35

Clustering(45) Variable = 3P LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P LOSS MUTATED       18     25     10
  3P LOSS WILD-TYPE     20     14     16
D45V1, multiclass
        clus
vv       3P LOSS MUTATED 3P LOSS WILD-TYPE
  CLUS_1              18                20
  CLUS_2              25                14
  CLUS_3              10                16
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P LOSS MUTATED       15     28     10
  3P LOSS WILD-TYPE     25     15     10
D45V2, multiclass
        clus
vv       3P LOSS MUTATED 3P LOSS WILD-TYPE
  CLUS_1              15                25
  CLUS_2              28                15
  CLUS_3              10                10
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3P LOSS MUTATED        9     16      3     13
  3P LOSS WILD-TYPE      6      7      4     12
D45V3, multiclass
        clus
vv       3P LOSS MUTATED 3P LOSS WILD-TYPE
  CLUS_1               9                 6
  CLUS_2              16                 7
  CLUS_3               3                 4
  CLUS_4              13                12
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P LOSS MUTATED       13      1     27
  3P LOSS WILD-TYPE     14      3     12
D45V4, multiclass
        clus
vv       3P LOSS MUTATED 3P LOSS WILD-TYPE
  CLUS_1              13                14
  CLUS_2               1                 3
  CLUS_3              27                12
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P LOSS MUTATED       20     10     13
  3P LOSS WILD-TYPE     10      4     15
D45V5, multiclass
        clus
vv       3P LOSS MUTATED 3P LOSS WILD-TYPE
  CLUS_1              20                10
  CLUS_2              10                 4
  CLUS_3              13                15
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P LOSS MUTATED        0     13     30
  3P LOSS WILD-TYPE      1     15     13
D45V6, multiclass
        clus
vv       3P LOSS MUTATED 3P LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              13                15
  CLUS_3              30                13
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3P LOSS MUTATED       10      4     16     13
  3P LOSS WILD-TYPE      2      5      9     13
D45V7, multiclass
        clus
vv       3P LOSS MUTATED 3P LOSS WILD-TYPE
  CLUS_1              10                 2
  CLUS_2               4                 5
  CLUS_3              16                 9
  CLUS_4              13                13
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3P LOSS MUTATED        0     13     30
  3P LOSS WILD-TYPE      1     15     13
D45V8, multiclass
        clus
vv       3P LOSS MUTATED 3P LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              13                15
  CLUS_3              30                13

Clustering(46) Variable = 3Q LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q LOSS MUTATED        4      9      2
  3Q LOSS WILD-TYPE     34     30     24
D46V1, multiclass
        clus
vv       3Q LOSS MUTATED 3Q LOSS WILD-TYPE
  CLUS_1               4                34
  CLUS_2               9                30
  CLUS_3               2                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q LOSS MUTATED        5      7      3
  3Q LOSS WILD-TYPE     35     36     17
D46V2, multiclass
        clus
vv       3Q LOSS MUTATED 3Q LOSS WILD-TYPE
  CLUS_1               5                35
  CLUS_2               7                36
  CLUS_3               3                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3Q LOSS MUTATED        6      3      0      4
  3Q LOSS WILD-TYPE      9     20      7     21
D46V3, multiclass
        clus
vv       3Q LOSS MUTATED 3Q LOSS WILD-TYPE
  CLUS_1               6                 9
  CLUS_2               3                20
  CLUS_3               0                 7
  CLUS_4               4                21
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q LOSS MUTATED        4      0      9
  3Q LOSS WILD-TYPE     23      4     30
D46V4, multiclass
        clus
vv       3Q LOSS MUTATED 3Q LOSS WILD-TYPE
  CLUS_1               4                23
  CLUS_2               0                 4
  CLUS_3               9                30
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q LOSS MUTATED        5      4      4
  3Q LOSS WILD-TYPE     25     10     24
D46V5, multiclass
        clus
vv       3Q LOSS MUTATED 3Q LOSS WILD-TYPE
  CLUS_1               5                25
  CLUS_2               4                10
  CLUS_3               4                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q LOSS MUTATED        0      4      9
  3Q LOSS WILD-TYPE      1     24     34
D46V6, multiclass
        clus
vv       3Q LOSS MUTATED 3Q LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               4                24
  CLUS_3               9                34
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3Q LOSS MUTATED        2      2      5      4
  3Q LOSS WILD-TYPE     10      7     20     22
D46V7, multiclass
        clus
vv       3Q LOSS MUTATED 3Q LOSS WILD-TYPE
  CLUS_1               2                10
  CLUS_2               2                 7
  CLUS_3               5                20
  CLUS_4               4                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  3Q LOSS MUTATED        0      4      9
  3Q LOSS WILD-TYPE      1     24     34
D46V8, multiclass
        clus
vv       3Q LOSS MUTATED 3Q LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               4                24
  CLUS_3               9                34

Clustering(47) Variable = 4P LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P LOSS MUTATED       13     26     17
  4P LOSS WILD-TYPE     25     13      9
D47V1, multiclass
        clus
vv       4P LOSS MUTATED 4P LOSS WILD-TYPE
  CLUS_1              13                25
  CLUS_2              26                13
  CLUS_3              17                 9
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P LOSS MUTATED       21     26      9
  4P LOSS WILD-TYPE     19     17     11
D47V2, multiclass
        clus
vv       4P LOSS MUTATED 4P LOSS WILD-TYPE
  CLUS_1              21                19
  CLUS_2              26                17
  CLUS_3               9                11
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4P LOSS MUTATED        7     18      3     14
  4P LOSS WILD-TYPE      8      5      4     11
D47V3, multiclass
        clus
vv       4P LOSS MUTATED 4P LOSS WILD-TYPE
  CLUS_1               7                 8
  CLUS_2              18                 5
  CLUS_3               3                 4
  CLUS_4              14                11
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P LOSS MUTATED       14      2     26
  4P LOSS WILD-TYPE     13      2     13
D47V4, multiclass
        clus
vv       4P LOSS MUTATED 4P LOSS WILD-TYPE
  CLUS_1              14                13
  CLUS_2               2                 2
  CLUS_3              26                13
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P LOSS MUTATED       20      8     14
  4P LOSS WILD-TYPE     10      6     14
D47V5, multiclass
        clus
vv       4P LOSS MUTATED 4P LOSS WILD-TYPE
  CLUS_1              20                10
  CLUS_2               8                 6
  CLUS_3              14                14
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P LOSS MUTATED        0     14     28
  4P LOSS WILD-TYPE      1     14     15
D47V6, multiclass
        clus
vv       4P LOSS MUTATED 4P LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              14                14
  CLUS_3              28                15
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4P LOSS MUTATED        8      5     16     13
  4P LOSS WILD-TYPE      4      4      9     13
D47V7, multiclass
        clus
vv       4P LOSS MUTATED 4P LOSS WILD-TYPE
  CLUS_1               8                 4
  CLUS_2               5                 4
  CLUS_3              16                 9
  CLUS_4              13                13
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4P LOSS MUTATED        0     14     28
  4P LOSS WILD-TYPE      1     14     15
D47V8, multiclass
        clus
vv       4P LOSS MUTATED 4P LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              14                14
  CLUS_3              28                15

Clustering(48) Variable = 4Q LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q LOSS MUTATED       11     20     18
  4Q LOSS WILD-TYPE     27     19      8
D48V1, multiclass
        clus
vv       4Q LOSS MUTATED 4Q LOSS WILD-TYPE
  CLUS_1              11                27
  CLUS_2              20                19
  CLUS_3              18                 8
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q LOSS MUTATED       21     22      6
  4Q LOSS WILD-TYPE     19     21     14
D48V2, multiclass
        clus
vv       4Q LOSS MUTATED 4Q LOSS WILD-TYPE
  CLUS_1              21                19
  CLUS_2              22                21
  CLUS_3               6                14
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4Q LOSS MUTATED        5     15      1     14
  4Q LOSS WILD-TYPE     10      8      6     11
D48V3, multiclass
        clus
vv       4Q LOSS MUTATED 4Q LOSS WILD-TYPE
  CLUS_1               5                10
  CLUS_2              15                 8
  CLUS_3               1                 6
  CLUS_4              14                11
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q LOSS MUTATED       14      1     20
  4Q LOSS WILD-TYPE     13      3     19
D48V4, multiclass
        clus
vv       4Q LOSS MUTATED 4Q LOSS WILD-TYPE
  CLUS_1              14                13
  CLUS_2               1                 3
  CLUS_3              20                19
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q LOSS MUTATED       16      5     14
  4Q LOSS WILD-TYPE     14      9     14
D48V5, multiclass
        clus
vv       4Q LOSS MUTATED 4Q LOSS WILD-TYPE
  CLUS_1              16                14
  CLUS_2               5                 9
  CLUS_3              14                14
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q LOSS MUTATED        0     14     21
  4Q LOSS WILD-TYPE      1     14     22
D48V6, multiclass
        clus
vv       4Q LOSS MUTATED 4Q LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              14                14
  CLUS_3              21                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4Q LOSS MUTATED        5      4     13     13
  4Q LOSS WILD-TYPE      7      5     12     13
D48V7, multiclass
        clus
vv       4Q LOSS MUTATED 4Q LOSS WILD-TYPE
  CLUS_1               5                 7
  CLUS_2               4                 5
  CLUS_3              13                12
  CLUS_4              13                13
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  4Q LOSS MUTATED        0     14     21
  4Q LOSS WILD-TYPE      1     14     22
D48V8, multiclass
        clus
vv       4Q LOSS MUTATED 4Q LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              14                14
  CLUS_3              21                22

Clustering(49) Variable = 5P LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P LOSS MUTATED       11      6      8
  5P LOSS WILD-TYPE     27     33     18
D49V1, multiclass
        clus
vv       5P LOSS MUTATED 5P LOSS WILD-TYPE
  CLUS_1              11                27
  CLUS_2               6                33
  CLUS_3               8                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P LOSS MUTATED       15      8      2
  5P LOSS WILD-TYPE     25     35     18
D49V2, multiclass
        clus
vv       5P LOSS MUTATED 5P LOSS WILD-TYPE
  CLUS_1              15                25
  CLUS_2               8                35
  CLUS_3               2                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5P LOSS MUTATED        4      3      0     10
  5P LOSS WILD-TYPE     11     20      7     15
D49V3, multiclass
        clus
vv       5P LOSS MUTATED 5P LOSS WILD-TYPE
  CLUS_1               4                11
  CLUS_2               3                20
  CLUS_3               0                 7
  CLUS_4              10                15
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P LOSS MUTATED       10      3      4
  5P LOSS WILD-TYPE     17      1     35
D49V4, multiclass
        clus
vv       5P LOSS MUTATED 5P LOSS WILD-TYPE
  CLUS_1              10                17
  CLUS_2               3                 1
  CLUS_3               4                35
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P LOSS MUTATED        6      1     10
  5P LOSS WILD-TYPE     24     13     18
D49V5, multiclass
        clus
vv       5P LOSS MUTATED 5P LOSS WILD-TYPE
  CLUS_1               6                24
  CLUS_2               1                13
  CLUS_3              10                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P LOSS MUTATED        0     10      7
  5P LOSS WILD-TYPE      1     18     36
D49V6, multiclass
        clus
vv       5P LOSS MUTATED 5P LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              10                18
  CLUS_3               7                36
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5P LOSS MUTATED        1      5      2      9
  5P LOSS WILD-TYPE     11      4     23     17
D49V7, multiclass
        clus
vv       5P LOSS MUTATED 5P LOSS WILD-TYPE
  CLUS_1               1                11
  CLUS_2               5                 4
  CLUS_3               2                23
  CLUS_4               9                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5P LOSS MUTATED        0     10      7
  5P LOSS WILD-TYPE      1     18     36
D49V8, multiclass
        clus
vv       5P LOSS MUTATED 5P LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              10                18
  CLUS_3               7                36

Clustering(50) Variable = 5Q LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q LOSS MUTATED       15     14     13
  5Q LOSS WILD-TYPE     23     25     13
D50V1, multiclass
        clus
vv       5Q LOSS MUTATED 5Q LOSS WILD-TYPE
  CLUS_1              15                23
  CLUS_2              14                25
  CLUS_3              13                13
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q LOSS MUTATED       21     16      5
  5Q LOSS WILD-TYPE     19     27     15
D50V2, multiclass
        clus
vv       5Q LOSS MUTATED 5Q LOSS WILD-TYPE
  CLUS_1              21                19
  CLUS_2              16                27
  CLUS_3               5                15
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5Q LOSS MUTATED        5      8      4     14
  5Q LOSS WILD-TYPE     10     15      3     11
D50V3, multiclass
        clus
vv       5Q LOSS MUTATED 5Q LOSS WILD-TYPE
  CLUS_1               5                10
  CLUS_2               8                15
  CLUS_3               4                 3
  CLUS_4              14                11
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q LOSS MUTATED       14      2     15
  5Q LOSS WILD-TYPE     13      2     24
D50V4, multiclass
        clus
vv       5Q LOSS MUTATED 5Q LOSS WILD-TYPE
  CLUS_1              14                13
  CLUS_2               2                 2
  CLUS_3              15                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q LOSS MUTATED       13      5     14
  5Q LOSS WILD-TYPE     17      9     14
D50V5, multiclass
        clus
vv       5Q LOSS MUTATED 5Q LOSS WILD-TYPE
  CLUS_1              13                17
  CLUS_2               5                 9
  CLUS_3              14                14
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q LOSS MUTATED        0     14     18
  5Q LOSS WILD-TYPE      1     14     25
D50V6, multiclass
        clus
vv       5Q LOSS MUTATED 5Q LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              14                14
  CLUS_3              18                25
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5Q LOSS MUTATED        5      6      8     13
  5Q LOSS WILD-TYPE      7      3     17     13
D50V7, multiclass
        clus
vv       5Q LOSS MUTATED 5Q LOSS WILD-TYPE
  CLUS_1               5                 7
  CLUS_2               6                 3
  CLUS_3               8                17
  CLUS_4              13                13
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  5Q LOSS MUTATED        0     14     18
  5Q LOSS WILD-TYPE      1     14     25
D50V8, multiclass
        clus
vv       5Q LOSS MUTATED 5Q LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              14                14
  CLUS_3              18                25

Clustering(51) Variable = 6P LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P LOSS MUTATED        5     11      4
  6P LOSS WILD-TYPE     33     28     22
D51V1, multiclass
        clus
vv       6P LOSS MUTATED 6P LOSS WILD-TYPE
  CLUS_1               5                33
  CLUS_2              11                28
  CLUS_3               4                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P LOSS MUTATED        6     11      3
  6P LOSS WILD-TYPE     34     32     17
D51V2, multiclass
        clus
vv       6P LOSS MUTATED 6P LOSS WILD-TYPE
  CLUS_1               6                34
  CLUS_2              11                32
  CLUS_3               3                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6P LOSS MUTATED        3      9      0      5
  6P LOSS WILD-TYPE     12     14      7     20
D51V3, multiclass
        clus
vv       6P LOSS MUTATED 6P LOSS WILD-TYPE
  CLUS_1               3                12
  CLUS_2               9                14
  CLUS_3               0                 7
  CLUS_4               5                20
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P LOSS MUTATED        5      0     12
  6P LOSS WILD-TYPE     22      4     27
D51V4, multiclass
        clus
vv       6P LOSS MUTATED 6P LOSS WILD-TYPE
  CLUS_1               5                22
  CLUS_2               0                 4
  CLUS_3              12                27
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P LOSS MUTATED        8      4      5
  6P LOSS WILD-TYPE     22     10     23
D51V5, multiclass
        clus
vv       6P LOSS MUTATED 6P LOSS WILD-TYPE
  CLUS_1               8                22
  CLUS_2               4                10
  CLUS_3               5                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P LOSS MUTATED        0      5     12
  6P LOSS WILD-TYPE      1     23     31
D51V6, multiclass
        clus
vv       6P LOSS MUTATED 6P LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               5                23
  CLUS_3              12                31
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6P LOSS MUTATED        4      3      5      5
  6P LOSS WILD-TYPE      8      6     20     21
D51V7, multiclass
        clus
vv       6P LOSS MUTATED 6P LOSS WILD-TYPE
  CLUS_1               4                 8
  CLUS_2               3                 6
  CLUS_3               5                20
  CLUS_4               5                21
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6P LOSS MUTATED        0      5     12
  6P LOSS WILD-TYPE      1     23     31
D51V8, multiclass
        clus
vv       6P LOSS MUTATED 6P LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               5                23
  CLUS_3              12                31

Clustering(52) Variable = 6Q LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q LOSS MUTATED        5      8      5
  6Q LOSS WILD-TYPE     33     31     21
D52V1, multiclass
        clus
vv       6Q LOSS MUTATED 6Q LOSS WILD-TYPE
  CLUS_1               5                33
  CLUS_2               8                31
  CLUS_3               5                21
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q LOSS MUTATED        6      9      3
  6Q LOSS WILD-TYPE     34     34     17
D52V2, multiclass
        clus
vv       6Q LOSS MUTATED 6Q LOSS WILD-TYPE
  CLUS_1               6                34
  CLUS_2               9                34
  CLUS_3               3                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6Q LOSS MUTATED        3      8      0      4
  6Q LOSS WILD-TYPE     12     15      7     21
D52V3, multiclass
        clus
vv       6Q LOSS MUTATED 6Q LOSS WILD-TYPE
  CLUS_1               3                12
  CLUS_2               8                15
  CLUS_3               0                 7
  CLUS_4               4                21
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q LOSS MUTATED        4      0     11
  6Q LOSS WILD-TYPE     23      4     28
D52V4, multiclass
        clus
vv       6Q LOSS MUTATED 6Q LOSS WILD-TYPE
  CLUS_1               4                23
  CLUS_2               0                 4
  CLUS_3              11                28
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q LOSS MUTATED        8      3      4
  6Q LOSS WILD-TYPE     22     11     24
D52V5, multiclass
        clus
vv       6Q LOSS MUTATED 6Q LOSS WILD-TYPE
  CLUS_1               8                22
  CLUS_2               3                11
  CLUS_3               4                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q LOSS MUTATED        0      4     11
  6Q LOSS WILD-TYPE      1     24     32
D52V6, multiclass
        clus
vv       6Q LOSS MUTATED 6Q LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               4                24
  CLUS_3              11                32
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6Q LOSS MUTATED        3      2      6      4
  6Q LOSS WILD-TYPE      9      7     19     22
D52V7, multiclass
        clus
vv       6Q LOSS MUTATED 6Q LOSS WILD-TYPE
  CLUS_1               3                 9
  CLUS_2               2                 7
  CLUS_3               6                19
  CLUS_4               4                22
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  6Q LOSS MUTATED        0      4     11
  6Q LOSS WILD-TYPE      1     24     32
D52V8, multiclass
        clus
vv       6Q LOSS MUTATED 6Q LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               4                24
  CLUS_3              11                32

Clustering(53) Variable = 7P LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7P LOSS MUTATED        3      3      1
  7P LOSS WILD-TYPE     35     36     25
D53V1, multiclass
        clus
vv       7P LOSS MUTATED 7P LOSS WILD-TYPE
  CLUS_1               3                35
  CLUS_2               3                36
  CLUS_3               1                25
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7P LOSS MUTATED        1      4      2
  7P LOSS WILD-TYPE     39     39     18
D53V2, multiclass
        clus
vv       7P LOSS MUTATED 7P LOSS WILD-TYPE
  CLUS_1               1                39
  CLUS_2               4                39
  CLUS_3               2                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  7P LOSS MUTATED        3      1      0      1
  7P LOSS WILD-TYPE     12     22      7     24
D53V3, multiclass
        clus
vv       7P LOSS MUTATED 7P LOSS WILD-TYPE
  CLUS_1               3                12
  CLUS_2               1                22
  CLUS_3               0                 7
  CLUS_4               1                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7P LOSS MUTATED        1      2      2
  7P LOSS WILD-TYPE     26      2     37
D53V4, multiclass
        clus
vv       7P LOSS MUTATED 7P LOSS WILD-TYPE
  CLUS_1               1                26
  CLUS_2               2                 2
  CLUS_3               2                37
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7P LOSS MUTATED        3      1      1
  7P LOSS WILD-TYPE     27     13     27
D53V5, multiclass
        clus
vv       7P LOSS MUTATED 7P LOSS WILD-TYPE
  CLUS_1               3                27
  CLUS_2               1                13
  CLUS_3               1                27
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7P LOSS MUTATED        0      1      4
  7P LOSS WILD-TYPE      1     27     39
D53V6, multiclass
        clus
vv       7P LOSS MUTATED 7P LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               1                27
  CLUS_3               4                39
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  7P LOSS MUTATED        1      3      0      1
  7P LOSS WILD-TYPE     11      6     25     25
D53V7, multiclass
        clus
vv       7P LOSS MUTATED 7P LOSS WILD-TYPE
  CLUS_1               1                11
  CLUS_2               3                 6
  CLUS_3               0                25
  CLUS_4               1                25
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7P LOSS MUTATED        0      1      4
  7P LOSS WILD-TYPE      1     27     39
D53V8, multiclass
        clus
vv       7P LOSS MUTATED 7P LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               1                27
  CLUS_3               4                39

Clustering(54) Variable = 7Q LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7Q LOSS MUTATED        8      2      2
  7Q LOSS WILD-TYPE     30     37     24
D54V1, multiclass
        clus
vv       7Q LOSS MUTATED 7Q LOSS WILD-TYPE
  CLUS_1               8                30
  CLUS_2               2                37
  CLUS_3               2                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7Q LOSS MUTATED        4      2      6
  7Q LOSS WILD-TYPE     36     41     14
D54V2, multiclass
        clus
vv       7Q LOSS MUTATED 7Q LOSS WILD-TYPE
  CLUS_1               4                36
  CLUS_2               2                41
  CLUS_3               6                14
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  7Q LOSS MUTATED        1      4      1      4
  7Q LOSS WILD-TYPE     14     19      6     21
D54V3, multiclass
        clus
vv       7Q LOSS MUTATED 7Q LOSS WILD-TYPE
  CLUS_1               1                14
  CLUS_2               4                19
  CLUS_3               1                 6
  CLUS_4               4                21
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7Q LOSS MUTATED        4      1      5
  7Q LOSS WILD-TYPE     23      3     34
D54V4, multiclass
        clus
vv       7Q LOSS MUTATED 7Q LOSS WILD-TYPE
  CLUS_1               4                23
  CLUS_2               1                 3
  CLUS_3               5                34
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7Q LOSS MUTATED        4      2      4
  7Q LOSS WILD-TYPE     26     12     24
D54V5, multiclass
        clus
vv       7Q LOSS MUTATED 7Q LOSS WILD-TYPE
  CLUS_1               4                26
  CLUS_2               2                12
  CLUS_3               4                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7Q LOSS MUTATED        0      4      6
  7Q LOSS WILD-TYPE      1     24     37
D54V6, multiclass
        clus
vv       7Q LOSS MUTATED 7Q LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               4                24
  CLUS_3               6                37
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  7Q LOSS MUTATED        2      2      3      3
  7Q LOSS WILD-TYPE     10      7     22     23
D54V7, multiclass
        clus
vv       7Q LOSS MUTATED 7Q LOSS WILD-TYPE
  CLUS_1               2                10
  CLUS_2               2                 7
  CLUS_3               3                22
  CLUS_4               3                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  7Q LOSS MUTATED        0      4      6
  7Q LOSS WILD-TYPE      1     24     37
D54V8, multiclass
        clus
vv       7Q LOSS MUTATED 7Q LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               4                24
  CLUS_3               6                37

Clustering(55) Variable = 8P LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P LOSS MUTATED       11     14      8
  8P LOSS WILD-TYPE     27     25     18
D55V1, multiclass
        clus
vv       8P LOSS MUTATED 8P LOSS WILD-TYPE
  CLUS_1              11                27
  CLUS_2              14                25
  CLUS_3               8                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P LOSS MUTATED       12     15      6
  8P LOSS WILD-TYPE     28     28     14
D55V2, multiclass
        clus
vv       8P LOSS MUTATED 8P LOSS WILD-TYPE
  CLUS_1              12                28
  CLUS_2              15                28
  CLUS_3               6                14
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8P LOSS MUTATED        4     11      3      9
  8P LOSS WILD-TYPE     11     12      4     16
D55V3, multiclass
        clus
vv       8P LOSS MUTATED 8P LOSS WILD-TYPE
  CLUS_1               4                11
  CLUS_2              11                12
  CLUS_3               3                 4
  CLUS_4               9                16
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P LOSS MUTATED       10      1     16
  8P LOSS WILD-TYPE     17      3     23
D55V4, multiclass
        clus
vv       8P LOSS MUTATED 8P LOSS WILD-TYPE
  CLUS_1              10                17
  CLUS_2               1                 3
  CLUS_3              16                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P LOSS MUTATED       12      6     10
  8P LOSS WILD-TYPE     18      8     18
D55V5, multiclass
        clus
vv       8P LOSS MUTATED 8P LOSS WILD-TYPE
  CLUS_1              12                18
  CLUS_2               6                 8
  CLUS_3              10                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P LOSS MUTATED        0     10     18
  8P LOSS WILD-TYPE      1     18     25
D55V6, multiclass
        clus
vv       8P LOSS MUTATED 8P LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              10                18
  CLUS_3              18                25
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8P LOSS MUTATED        6      3     10      9
  8P LOSS WILD-TYPE      6      6     15     17
D55V7, multiclass
        clus
vv       8P LOSS MUTATED 8P LOSS WILD-TYPE
  CLUS_1               6                 6
  CLUS_2               3                 6
  CLUS_3              10                15
  CLUS_4               9                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8P LOSS MUTATED        0     10     18
  8P LOSS WILD-TYPE      1     18     25
D55V8, multiclass
        clus
vv       8P LOSS MUTATED 8P LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              10                18
  CLUS_3              18                25

Clustering(56) Variable = 8Q LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q LOSS MUTATED        3      5      3
  8Q LOSS WILD-TYPE     35     34     23
D56V1, multiclass
        clus
vv       8Q LOSS MUTATED 8Q LOSS WILD-TYPE
  CLUS_1               3                35
  CLUS_2               5                34
  CLUS_3               3                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q LOSS MUTATED        4      4      3
  8Q LOSS WILD-TYPE     36     39     17
D56V2, multiclass
        clus
vv       8Q LOSS MUTATED 8Q LOSS WILD-TYPE
  CLUS_1               4                36
  CLUS_2               4                39
  CLUS_3               3                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8Q LOSS MUTATED        3      2      0      4
  8Q LOSS WILD-TYPE     12     21      7     21
D56V3, multiclass
        clus
vv       8Q LOSS MUTATED 8Q LOSS WILD-TYPE
  CLUS_1               3                12
  CLUS_2               2                21
  CLUS_3               0                 7
  CLUS_4               4                21
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q LOSS MUTATED        4      1      4
  8Q LOSS WILD-TYPE     23      3     35
D56V4, multiclass
        clus
vv       8Q LOSS MUTATED 8Q LOSS WILD-TYPE
  CLUS_1               4                23
  CLUS_2               1                 3
  CLUS_3               4                35
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q LOSS MUTATED        3      2      4
  8Q LOSS WILD-TYPE     27     12     24
D56V5, multiclass
        clus
vv       8Q LOSS MUTATED 8Q LOSS WILD-TYPE
  CLUS_1               3                27
  CLUS_2               2                12
  CLUS_3               4                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q LOSS MUTATED        0      4      5
  8Q LOSS WILD-TYPE      1     24     38
D56V6, multiclass
        clus
vv       8Q LOSS MUTATED 8Q LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               4                24
  CLUS_3               5                38
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8Q LOSS MUTATED        1      3      2      3
  8Q LOSS WILD-TYPE     11      6     23     23
D56V7, multiclass
        clus
vv       8Q LOSS MUTATED 8Q LOSS WILD-TYPE
  CLUS_1               1                11
  CLUS_2               3                 6
  CLUS_3               2                23
  CLUS_4               3                23
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  8Q LOSS MUTATED        0      4      5
  8Q LOSS WILD-TYPE      1     24     38
D56V8, multiclass
        clus
vv       8Q LOSS MUTATED 8Q LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               4                24
  CLUS_3               5                38

Clustering(57) Variable = 9P LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P LOSS MUTATED       17     23     14
  9P LOSS WILD-TYPE     21     16     12
D57V1, multiclass
        clus
vv       9P LOSS MUTATED 9P LOSS WILD-TYPE
  CLUS_1              17                21
  CLUS_2              23                16
  CLUS_3              14                12
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P LOSS MUTATED       21     20     13
  9P LOSS WILD-TYPE     19     23      7
D57V2, multiclass
        clus
vv       9P LOSS MUTATED 9P LOSS WILD-TYPE
  CLUS_1              21                19
  CLUS_2              20                23
  CLUS_3              13                 7
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  9P LOSS MUTATED        7     15      5     14
  9P LOSS WILD-TYPE      8      8      2     11
D57V3, multiclass
        clus
vv       9P LOSS MUTATED 9P LOSS WILD-TYPE
  CLUS_1               7                 8
  CLUS_2              15                 8
  CLUS_3               5                 2
  CLUS_4              14                11
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P LOSS MUTATED       15      2     24
  9P LOSS WILD-TYPE     12      2     15
D57V4, multiclass
        clus
vv       9P LOSS MUTATED 9P LOSS WILD-TYPE
  CLUS_1              15                12
  CLUS_2               2                 2
  CLUS_3              24                15
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P LOSS MUTATED       19      7     15
  9P LOSS WILD-TYPE     11      7     13
D57V5, multiclass
        clus
vv       9P LOSS MUTATED 9P LOSS WILD-TYPE
  CLUS_1              19                11
  CLUS_2               7                 7
  CLUS_3              15                13
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P LOSS MUTATED        0     15     26
  9P LOSS WILD-TYPE      1     13     17
D57V6, multiclass
        clus
vv       9P LOSS MUTATED 9P LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              15                13
  CLUS_3              26                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  9P LOSS MUTATED        7      6     15     13
  9P LOSS WILD-TYPE      5      3     10     13
D57V7, multiclass
        clus
vv       9P LOSS MUTATED 9P LOSS WILD-TYPE
  CLUS_1               7                 5
  CLUS_2               6                 3
  CLUS_3              15                10
  CLUS_4              13                13
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9P LOSS MUTATED        0     15     26
  9P LOSS WILD-TYPE      1     13     17
D57V8, multiclass
        clus
vv       9P LOSS MUTATED 9P LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              15                13
  CLUS_3              26                17

Clustering(58) Variable = 9Q LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9Q LOSS MUTATED       10     16      7
  9Q LOSS WILD-TYPE     28     23     19
D58V1, multiclass
        clus
vv       9Q LOSS MUTATED 9Q LOSS WILD-TYPE
  CLUS_1              10                28
  CLUS_2              16                23
  CLUS_3               7                19
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9Q LOSS MUTATED       11     13      9
  9Q LOSS WILD-TYPE     29     30     11
D58V2, multiclass
        clus
vv       9Q LOSS MUTATED 9Q LOSS WILD-TYPE
  CLUS_1              11                29
  CLUS_2              13                30
  CLUS_3               9                11
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  9Q LOSS MUTATED        5      8      3      7
  9Q LOSS WILD-TYPE     10     15      4     18
D58V3, multiclass
        clus
vv       9Q LOSS MUTATED 9Q LOSS WILD-TYPE
  CLUS_1               5                10
  CLUS_2               8                15
  CLUS_3               3                 4
  CLUS_4               7                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9Q LOSS MUTATED        7      1     15
  9Q LOSS WILD-TYPE     20      3     24
D58V4, multiclass
        clus
vv       9Q LOSS MUTATED 9Q LOSS WILD-TYPE
  CLUS_1               7                20
  CLUS_2               1                 3
  CLUS_3              15                24
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9Q LOSS MUTATED       12      4      7
  9Q LOSS WILD-TYPE     18     10     21
D58V5, multiclass
        clus
vv       9Q LOSS MUTATED 9Q LOSS WILD-TYPE
  CLUS_1              12                18
  CLUS_2               4                10
  CLUS_3               7                21
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9Q LOSS MUTATED        0      7     16
  9Q LOSS WILD-TYPE      1     21     27
D58V6, multiclass
        clus
vv       9Q LOSS MUTATED 9Q LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               7                21
  CLUS_3              16                27
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  9Q LOSS MUTATED        3      5     10      5
  9Q LOSS WILD-TYPE      9      4     15     21
D58V7, multiclass
        clus
vv       9Q LOSS MUTATED 9Q LOSS WILD-TYPE
  CLUS_1               3                 9
  CLUS_2               5                 4
  CLUS_3              10                15
  CLUS_4               5                21
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  9Q LOSS MUTATED        0      7     16
  9Q LOSS WILD-TYPE      1     21     27
D58V8, multiclass
        clus
vv       9Q LOSS MUTATED 9Q LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2               7                21
  CLUS_3              16                27

Clustering(59) Variable = 10P LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P LOSS MUTATED        6     14      6
  10P LOSS WILD-TYPE     32     25     20
D59V1, multiclass
        clus
vv       10P LOSS MUTATED 10P LOSS WILD-TYPE
  CLUS_1                6                 32
  CLUS_2               14                 25
  CLUS_3                6                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P LOSS MUTATED        7     15      4
  10P LOSS WILD-TYPE     33     28     16
D59V2, multiclass
        clus
vv       10P LOSS MUTATED 10P LOSS WILD-TYPE
  CLUS_1                7                 33
  CLUS_2               15                 28
  CLUS_3                4                 16
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10P LOSS MUTATED        5      9      2      6
  10P LOSS WILD-TYPE     10     14      5     19
D59V3, multiclass
        clus
vv       10P LOSS MUTATED 10P LOSS WILD-TYPE
  CLUS_1                5                 10
  CLUS_2                9                 14
  CLUS_3                2                  5
  CLUS_4                6                 19
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P LOSS MUTATED        7      0     15
  10P LOSS WILD-TYPE     20      4     24
D59V4, multiclass
        clus
vv       10P LOSS MUTATED 10P LOSS WILD-TYPE
  CLUS_1                7                 20
  CLUS_2                0                  4
  CLUS_3               15                 24
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P LOSS MUTATED       11      4      7
  10P LOSS WILD-TYPE     19     10     21
D59V5, multiclass
        clus
vv       10P LOSS MUTATED 10P LOSS WILD-TYPE
  CLUS_1               11                 19
  CLUS_2                4                 10
  CLUS_3                7                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P LOSS MUTATED        0      7     15
  10P LOSS WILD-TYPE      1     21     28
D59V6, multiclass
        clus
vv       10P LOSS MUTATED 10P LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                7                 21
  CLUS_3               15                 28
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10P LOSS MUTATED        4      2      9      7
  10P LOSS WILD-TYPE      8      7     16     19
D59V7, multiclass
        clus
vv       10P LOSS MUTATED 10P LOSS WILD-TYPE
  CLUS_1                4                  8
  CLUS_2                2                  7
  CLUS_3                9                 16
  CLUS_4                7                 19
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10P LOSS MUTATED        0      7     15
  10P LOSS WILD-TYPE      1     21     28
D59V8, multiclass
        clus
vv       10P LOSS MUTATED 10P LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                7                 21
  CLUS_3               15                 28

Clustering(60) Variable = 10Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q LOSS MUTATED        6     19      6
  10Q LOSS WILD-TYPE     32     20     20
D60V1, multiclass
        clus
vv       10Q LOSS MUTATED 10Q LOSS WILD-TYPE
  CLUS_1                6                 32
  CLUS_2               19                 20
  CLUS_3                6                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q LOSS MUTATED        7     20      4
  10Q LOSS WILD-TYPE     33     23     16
D60V2, multiclass
        clus
vv       10Q LOSS MUTATED 10Q LOSS WILD-TYPE
  CLUS_1                7                 33
  CLUS_2               20                 23
  CLUS_3                4                 16
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10Q LOSS MUTATED        6     11      2      6
  10Q LOSS WILD-TYPE      9     12      5     19
D60V3, multiclass
        clus
vv       10Q LOSS MUTATED 10Q LOSS WILD-TYPE
  CLUS_1                6                  9
  CLUS_2               11                 12
  CLUS_3                2                  5
  CLUS_4                6                 19
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q LOSS MUTATED        6      0     19
  10Q LOSS WILD-TYPE     21      4     20
D60V4, multiclass
        clus
vv       10Q LOSS MUTATED 10Q LOSS WILD-TYPE
  CLUS_1                6                 21
  CLUS_2                0                  4
  CLUS_3               19                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q LOSS MUTATED       13      7      6
  10Q LOSS WILD-TYPE     17      7     22
D60V5, multiclass
        clus
vv       10Q LOSS MUTATED 10Q LOSS WILD-TYPE
  CLUS_1               13                 17
  CLUS_2                7                  7
  CLUS_3                6                 22
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q LOSS MUTATED        0      6     20
  10Q LOSS WILD-TYPE      1     22     23
D60V6, multiclass
        clus
vv       10Q LOSS MUTATED 10Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                6                 22
  CLUS_3               20                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10Q LOSS MUTATED        7      2     11      6
  10Q LOSS WILD-TYPE      5      7     14     20
D60V7, multiclass
        clus
vv       10Q LOSS MUTATED 10Q LOSS WILD-TYPE
  CLUS_1                7                  5
  CLUS_2                2                  7
  CLUS_3               11                 14
  CLUS_4                6                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  10Q LOSS MUTATED        0      6     20
  10Q LOSS WILD-TYPE      1     22     23
D60V8, multiclass
        clus
vv       10Q LOSS MUTATED 10Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                6                 22
  CLUS_3               20                 23

Clustering(61) Variable = 11P LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P LOSS MUTATED        8     13      8
  11P LOSS WILD-TYPE     30     26     18
D61V1, multiclass
        clus
vv       11P LOSS MUTATED 11P LOSS WILD-TYPE
  CLUS_1                8                 30
  CLUS_2               13                 26
  CLUS_3                8                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P LOSS MUTATED       12     13      4
  11P LOSS WILD-TYPE     28     30     16
D61V2, multiclass
        clus
vv       11P LOSS MUTATED 11P LOSS WILD-TYPE
  CLUS_1               12                 28
  CLUS_2               13                 30
  CLUS_3                4                 16
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11P LOSS MUTATED        3     11      1      6
  11P LOSS WILD-TYPE     12     12      6     19
D61V3, multiclass
        clus
vv       11P LOSS MUTATED 11P LOSS WILD-TYPE
  CLUS_1                3                 12
  CLUS_2               11                 12
  CLUS_3                1                  6
  CLUS_4                6                 19
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P LOSS MUTATED        6      1     14
  11P LOSS WILD-TYPE     21      3     25
D61V4, multiclass
        clus
vv       11P LOSS MUTATED 11P LOSS WILD-TYPE
  CLUS_1                6                 21
  CLUS_2                1                  3
  CLUS_3               14                 25
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P LOSS MUTATED       10      6      6
  11P LOSS WILD-TYPE     20      8     22
D61V5, multiclass
        clus
vv       11P LOSS MUTATED 11P LOSS WILD-TYPE
  CLUS_1               10                 20
  CLUS_2                6                  8
  CLUS_3                6                 22
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P LOSS MUTATED        0      6     16
  11P LOSS WILD-TYPE      1     22     27
D61V6, multiclass
        clus
vv       11P LOSS MUTATED 11P LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                6                 22
  CLUS_3               16                 27
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11P LOSS MUTATED        5      3      9      5
  11P LOSS WILD-TYPE      7      6     16     21
D61V7, multiclass
        clus
vv       11P LOSS MUTATED 11P LOSS WILD-TYPE
  CLUS_1                5                  7
  CLUS_2                3                  6
  CLUS_3                9                 16
  CLUS_4                5                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11P LOSS MUTATED        0      6     16
  11P LOSS WILD-TYPE      1     22     27
D61V8, multiclass
        clus
vv       11P LOSS MUTATED 11P LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                6                 22
  CLUS_3               16                 27

Clustering(62) Variable = 11Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q LOSS MUTATED        8     17      7
  11Q LOSS WILD-TYPE     30     22     19
D62V1, multiclass
        clus
vv       11Q LOSS MUTATED 11Q LOSS WILD-TYPE
  CLUS_1                8                 30
  CLUS_2               17                 22
  CLUS_3                7                 19
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q LOSS MUTATED       11     14      7
  11Q LOSS WILD-TYPE     29     29     13
D62V2, multiclass
        clus
vv       11Q LOSS MUTATED 11Q LOSS WILD-TYPE
  CLUS_1               11                 29
  CLUS_2               14                 29
  CLUS_3                7                 13
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11Q LOSS MUTATED        6     10      3      7
  11Q LOSS WILD-TYPE      9     13      4     18
D62V3, multiclass
        clus
vv       11Q LOSS MUTATED 11Q LOSS WILD-TYPE
  CLUS_1                6                  9
  CLUS_2               10                 13
  CLUS_3                3                  4
  CLUS_4                7                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q LOSS MUTATED        7      3     16
  11Q LOSS WILD-TYPE     20      1     23
D62V4, multiclass
        clus
vv       11Q LOSS MUTATED 11Q LOSS WILD-TYPE
  CLUS_1                7                 20
  CLUS_2                3                  1
  CLUS_3               16                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q LOSS MUTATED       14      4      7
  11Q LOSS WILD-TYPE     16     10     21
D62V5, multiclass
        clus
vv       11Q LOSS MUTATED 11Q LOSS WILD-TYPE
  CLUS_1               14                 16
  CLUS_2                4                 10
  CLUS_3                7                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q LOSS MUTATED        0      7     18
  11Q LOSS WILD-TYPE      1     21     25
D62V6, multiclass
        clus
vv       11Q LOSS MUTATED 11Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                7                 21
  CLUS_3               18                 25
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11Q LOSS MUTATED        3      5     11      6
  11Q LOSS WILD-TYPE      9      4     14     20
D62V7, multiclass
        clus
vv       11Q LOSS MUTATED 11Q LOSS WILD-TYPE
  CLUS_1                3                  9
  CLUS_2                5                  4
  CLUS_3               11                 14
  CLUS_4                6                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  11Q LOSS MUTATED        0      7     18
  11Q LOSS WILD-TYPE      1     21     25
D62V8, multiclass
        clus
vv       11Q LOSS MUTATED 11Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                7                 21
  CLUS_3               18                 25

Clustering(63) Variable = 12P LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12P LOSS MUTATED        8      4      6
  12P LOSS WILD-TYPE     30     35     20
D63V1, multiclass
        clus
vv       12P LOSS MUTATED 12P LOSS WILD-TYPE
  CLUS_1                8                 30
  CLUS_2                4                 35
  CLUS_3                6                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12P LOSS MUTATED        9      4      5
  12P LOSS WILD-TYPE     31     39     15
D63V2, multiclass
        clus
vv       12P LOSS MUTATED 12P LOSS WILD-TYPE
  CLUS_1                9                 31
  CLUS_2                4                 39
  CLUS_3                5                 15
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  12P LOSS MUTATED        1      3      1     10
  12P LOSS WILD-TYPE     14     20      6     15
D63V3, multiclass
        clus
vv       12P LOSS MUTATED 12P LOSS WILD-TYPE
  CLUS_1                1                 14
  CLUS_2                3                 20
  CLUS_3                1                  6
  CLUS_4               10                 15
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12P LOSS MUTATED       11      0      4
  12P LOSS WILD-TYPE     16      4     35
D63V4, multiclass
        clus
vv       12P LOSS MUTATED 12P LOSS WILD-TYPE
  CLUS_1               11                 16
  CLUS_2                0                  4
  CLUS_3                4                 35
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12P LOSS MUTATED        4      0     11
  12P LOSS WILD-TYPE     26     14     17
D63V5, multiclass
        clus
vv       12P LOSS MUTATED 12P LOSS WILD-TYPE
  CLUS_1                4                 26
  CLUS_2                0                 14
  CLUS_3               11                 17
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12P LOSS MUTATED        0     11      4
  12P LOSS WILD-TYPE      1     17     39
D63V6, multiclass
        clus
vv       12P LOSS MUTATED 12P LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               11                 17
  CLUS_3                4                 39
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  12P LOSS MUTATED        1      1      3     10
  12P LOSS WILD-TYPE     11      8     22     16
D63V7, multiclass
        clus
vv       12P LOSS MUTATED 12P LOSS WILD-TYPE
  CLUS_1                1                 11
  CLUS_2                1                  8
  CLUS_3                3                 22
  CLUS_4               10                 16
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12P LOSS MUTATED        0     11      4
  12P LOSS WILD-TYPE      1     17     39
D63V8, multiclass
        clus
vv       12P LOSS MUTATED 12P LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               11                 17
  CLUS_3                4                 39

Clustering(64) Variable = 12Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12Q LOSS MUTATED        7      5      5
  12Q LOSS WILD-TYPE     31     34     21
D64V1, multiclass
        clus
vv       12Q LOSS MUTATED 12Q LOSS WILD-TYPE
  CLUS_1                7                 31
  CLUS_2                5                 34
  CLUS_3                5                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12Q LOSS MUTATED        9      4      4
  12Q LOSS WILD-TYPE     31     39     16
D64V2, multiclass
        clus
vv       12Q LOSS MUTATED 12Q LOSS WILD-TYPE
  CLUS_1                9                 31
  CLUS_2                4                 39
  CLUS_3                4                 16
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  12Q LOSS MUTATED        2      2      2      9
  12Q LOSS WILD-TYPE     13     21      5     16
D64V3, multiclass
        clus
vv       12Q LOSS MUTATED 12Q LOSS WILD-TYPE
  CLUS_1                2                 13
  CLUS_2                2                 21
  CLUS_3                2                  5
  CLUS_4                9                 16
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12Q LOSS MUTATED       10      0      5
  12Q LOSS WILD-TYPE     17      4     34
D64V4, multiclass
        clus
vv       12Q LOSS MUTATED 12Q LOSS WILD-TYPE
  CLUS_1               10                 17
  CLUS_2                0                  4
  CLUS_3                5                 34
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12Q LOSS MUTATED        4      1     10
  12Q LOSS WILD-TYPE     26     13     18
D64V5, multiclass
        clus
vv       12Q LOSS MUTATED 12Q LOSS WILD-TYPE
  CLUS_1                4                 26
  CLUS_2                1                 13
  CLUS_3               10                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12Q LOSS MUTATED        0     10      5
  12Q LOSS WILD-TYPE      1     18     38
D64V6, multiclass
        clus
vv       12Q LOSS MUTATED 12Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               10                 18
  CLUS_3                5                 38
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  12Q LOSS MUTATED        1      2      3      9
  12Q LOSS WILD-TYPE     11      7     22     17
D64V7, multiclass
        clus
vv       12Q LOSS MUTATED 12Q LOSS WILD-TYPE
  CLUS_1                1                 11
  CLUS_2                2                  7
  CLUS_3                3                 22
  CLUS_4                9                 17
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  12Q LOSS MUTATED        0     10      5
  12Q LOSS WILD-TYPE      1     18     38
D64V8, multiclass
        clus
vv       12Q LOSS MUTATED 12Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               10                 18
  CLUS_3                5                 38

Clustering(65) Variable = 13Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q LOSS MUTATED        8     22     11
  13Q LOSS WILD-TYPE     30     17     15
D65V1, multiclass
        clus
vv       13Q LOSS MUTATED 13Q LOSS WILD-TYPE
  CLUS_1                8                 30
  CLUS_2               22                 17
  CLUS_3               11                 15
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q LOSS MUTATED       12     22      7
  13Q LOSS WILD-TYPE     28     21     13
D65V2, multiclass
        clus
vv       13Q LOSS MUTATED 13Q LOSS WILD-TYPE
  CLUS_1               12                 28
  CLUS_2               22                 21
  CLUS_3                7                 13
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  13Q LOSS MUTATED        6     14      2      7
  13Q LOSS WILD-TYPE      9      9      5     18
D65V3, multiclass
        clus
vv       13Q LOSS MUTATED 13Q LOSS WILD-TYPE
  CLUS_1                6                  9
  CLUS_2               14                  9
  CLUS_3                2                  5
  CLUS_4                7                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q LOSS MUTATED        7      1     21
  13Q LOSS WILD-TYPE     20      3     18
D65V4, multiclass
        clus
vv       13Q LOSS MUTATED 13Q LOSS WILD-TYPE
  CLUS_1                7                 20
  CLUS_2                1                  3
  CLUS_3               21                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q LOSS MUTATED       16      7      7
  13Q LOSS WILD-TYPE     14      7     21
D65V5, multiclass
        clus
vv       13Q LOSS MUTATED 13Q LOSS WILD-TYPE
  CLUS_1               16                 14
  CLUS_2                7                  7
  CLUS_3                7                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q LOSS MUTATED        0      7     23
  13Q LOSS WILD-TYPE      1     21     20
D65V6, multiclass
        clus
vv       13Q LOSS MUTATED 13Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                7                 21
  CLUS_3               23                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  13Q LOSS MUTATED        6      7     12      5
  13Q LOSS WILD-TYPE      6      2     13     21
D65V7, multiclass
        clus
vv       13Q LOSS MUTATED 13Q LOSS WILD-TYPE
  CLUS_1                6                  6
  CLUS_2                7                  2
  CLUS_3               12                 13
  CLUS_4                5                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  13Q LOSS MUTATED        0      7     23
  13Q LOSS WILD-TYPE      1     21     20
D65V8, multiclass
        clus
vv       13Q LOSS MUTATED 13Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                7                 21
  CLUS_3               23                 20

Clustering(66) Variable = 14Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q LOSS MUTATED       10      6     10
  14Q LOSS WILD-TYPE     28     33     16
D66V1, multiclass
        clus
vv       14Q LOSS MUTATED 14Q LOSS WILD-TYPE
  CLUS_1               10                 28
  CLUS_2                6                 33
  CLUS_3               10                 16
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q LOSS MUTATED       17      5      4
  14Q LOSS WILD-TYPE     23     38     16
D66V2, multiclass
        clus
vv       14Q LOSS MUTATED 14Q LOSS WILD-TYPE
  CLUS_1               17                 23
  CLUS_2                5                 38
  CLUS_3                4                 16
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  14Q LOSS MUTATED        4      2      1     10
  14Q LOSS WILD-TYPE     11     21      6     15
D66V3, multiclass
        clus
vv       14Q LOSS MUTATED 14Q LOSS WILD-TYPE
  CLUS_1                4                 11
  CLUS_2                2                 21
  CLUS_3                1                  6
  CLUS_4               10                 15
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q LOSS MUTATED       10      1      6
  14Q LOSS WILD-TYPE     17      3     33
D66V4, multiclass
        clus
vv       14Q LOSS MUTATED 14Q LOSS WILD-TYPE
  CLUS_1               10                 17
  CLUS_2                1                  3
  CLUS_3                6                 33
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q LOSS MUTATED        3      4     10
  14Q LOSS WILD-TYPE     27     10     18
D66V5, multiclass
        clus
vv       14Q LOSS MUTATED 14Q LOSS WILD-TYPE
  CLUS_1                3                 27
  CLUS_2                4                 10
  CLUS_3               10                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q LOSS MUTATED        0     10      7
  14Q LOSS WILD-TYPE      1     18     36
D66V6, multiclass
        clus
vv       14Q LOSS MUTATED 14Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               10                 18
  CLUS_3                7                 36
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  14Q LOSS MUTATED        2      5      2      8
  14Q LOSS WILD-TYPE     10      4     23     18
D66V7, multiclass
        clus
vv       14Q LOSS MUTATED 14Q LOSS WILD-TYPE
  CLUS_1                2                 10
  CLUS_2                5                  4
  CLUS_3                2                 23
  CLUS_4                8                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  14Q LOSS MUTATED        0     10      7
  14Q LOSS WILD-TYPE      1     18     36
D66V8, multiclass
        clus
vv       14Q LOSS MUTATED 14Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               10                 18
  CLUS_3                7                 36

Clustering(67) Variable = 15Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q LOSS MUTATED        9      7      9
  15Q LOSS WILD-TYPE     29     32     17
D67V1, multiclass
        clus
vv       15Q LOSS MUTATED 15Q LOSS WILD-TYPE
  CLUS_1                9                 29
  CLUS_2                7                 32
  CLUS_3                9                 17
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q LOSS MUTATED       13      7      5
  15Q LOSS WILD-TYPE     27     36     15
D67V2, multiclass
        clus
vv       15Q LOSS MUTATED 15Q LOSS WILD-TYPE
  CLUS_1               13                 27
  CLUS_2                7                 36
  CLUS_3                5                 15
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  15Q LOSS MUTATED        3      4      3     10
  15Q LOSS WILD-TYPE     12     19      4     15
D67V3, multiclass
        clus
vv       15Q LOSS MUTATED 15Q LOSS WILD-TYPE
  CLUS_1                3                 12
  CLUS_2                4                 19
  CLUS_3                3                  4
  CLUS_4               10                 15
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q LOSS MUTATED       10      0     10
  15Q LOSS WILD-TYPE     17      4     29
D67V4, multiclass
        clus
vv       15Q LOSS MUTATED 15Q LOSS WILD-TYPE
  CLUS_1               10                 17
  CLUS_2                0                  4
  CLUS_3               10                 29
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q LOSS MUTATED        7      3     10
  15Q LOSS WILD-TYPE     23     11     18
D67V5, multiclass
        clus
vv       15Q LOSS MUTATED 15Q LOSS WILD-TYPE
  CLUS_1                7                 23
  CLUS_2                3                 11
  CLUS_3               10                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q LOSS MUTATED        0     10     10
  15Q LOSS WILD-TYPE      1     18     33
D67V6, multiclass
        clus
vv       15Q LOSS MUTATED 15Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               10                 18
  CLUS_3               10                 33
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  15Q LOSS MUTATED        3      3      5      9
  15Q LOSS WILD-TYPE      9      6     20     17
D67V7, multiclass
        clus
vv       15Q LOSS MUTATED 15Q LOSS WILD-TYPE
  CLUS_1                3                  9
  CLUS_2                3                  6
  CLUS_3                5                 20
  CLUS_4                9                 17
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  15Q LOSS MUTATED        0     10     10
  15Q LOSS WILD-TYPE      1     18     33
D67V8, multiclass
        clus
vv       15Q LOSS MUTATED 15Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               10                 18
  CLUS_3               10                 33

Clustering(68) Variable = 16P LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P LOSS MUTATED       12      3     12
  16P LOSS WILD-TYPE     26     36     14
D68V1, multiclass
        clus
vv       16P LOSS MUTATED 16P LOSS WILD-TYPE
  CLUS_1               12                 26
  CLUS_2                3                 36
  CLUS_3               12                 14
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P LOSS MUTATED       16      6      5
  16P LOSS WILD-TYPE     24     37     15
D68V2, multiclass
        clus
vv       16P LOSS MUTATED 16P LOSS WILD-TYPE
  CLUS_1               16                 24
  CLUS_2                6                 37
  CLUS_3                5                 15
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16P LOSS MUTATED        3      3      2     10
  16P LOSS WILD-TYPE     12     20      5     15
D68V3, multiclass
        clus
vv       16P LOSS MUTATED 16P LOSS WILD-TYPE
  CLUS_1                3                 12
  CLUS_2                3                 20
  CLUS_3                2                  5
  CLUS_4               10                 15
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P LOSS MUTATED       10      2      6
  16P LOSS WILD-TYPE     17      2     33
D68V4, multiclass
        clus
vv       16P LOSS MUTATED 16P LOSS WILD-TYPE
  CLUS_1               10                 17
  CLUS_2                2                  2
  CLUS_3                6                 33
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P LOSS MUTATED        4      3     10
  16P LOSS WILD-TYPE     26     11     18
D68V5, multiclass
        clus
vv       16P LOSS MUTATED 16P LOSS WILD-TYPE
  CLUS_1                4                 26
  CLUS_2                3                 11
  CLUS_3               10                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P LOSS MUTATED        0     10      7
  16P LOSS WILD-TYPE      1     18     36
D68V6, multiclass
        clus
vv       16P LOSS MUTATED 16P LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               10                 18
  CLUS_3                7                 36
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16P LOSS MUTATED        3      1      3     10
  16P LOSS WILD-TYPE      9      8     22     16
D68V7, multiclass
        clus
vv       16P LOSS MUTATED 16P LOSS WILD-TYPE
  CLUS_1                3                  9
  CLUS_2                1                  8
  CLUS_3                3                 22
  CLUS_4               10                 16
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16P LOSS MUTATED        0     10      7
  16P LOSS WILD-TYPE      1     18     36
D68V8, multiclass
        clus
vv       16P LOSS MUTATED 16P LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               10                 18
  CLUS_3                7                 36

Clustering(69) Variable = 16Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q LOSS MUTATED       12      3     14
  16Q LOSS WILD-TYPE     26     36     12
D69V1, multiclass
        clus
vv       16Q LOSS MUTATED 16Q LOSS WILD-TYPE
  CLUS_1               12                 26
  CLUS_2                3                 36
  CLUS_3               14                 12
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q LOSS MUTATED       17      7      5
  16Q LOSS WILD-TYPE     23     36     15
D69V2, multiclass
        clus
vv       16Q LOSS MUTATED 16Q LOSS WILD-TYPE
  CLUS_1               17                 23
  CLUS_2                7                 36
  CLUS_3                5                 15
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16Q LOSS MUTATED        2      3      3     11
  16Q LOSS WILD-TYPE     13     20      4     14
D69V3, multiclass
        clus
vv       16Q LOSS MUTATED 16Q LOSS WILD-TYPE
  CLUS_1                2                 13
  CLUS_2                3                 20
  CLUS_3                3                  4
  CLUS_4               11                 14
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q LOSS MUTATED       11      2      6
  16Q LOSS WILD-TYPE     16      2     33
D69V4, multiclass
        clus
vv       16Q LOSS MUTATED 16Q LOSS WILD-TYPE
  CLUS_1               11                 16
  CLUS_2                2                  2
  CLUS_3                6                 33
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q LOSS MUTATED        6      1     11
  16Q LOSS WILD-TYPE     24     13     17
D69V5, multiclass
        clus
vv       16Q LOSS MUTATED 16Q LOSS WILD-TYPE
  CLUS_1                6                 24
  CLUS_2                1                 13
  CLUS_3               11                 17
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q LOSS MUTATED        0     11      7
  16Q LOSS WILD-TYPE      1     17     36
D69V6, multiclass
        clus
vv       16Q LOSS MUTATED 16Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               11                 17
  CLUS_3                7                 36
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16Q LOSS MUTATED        1      3      4     10
  16Q LOSS WILD-TYPE     11      6     21     16
D69V7, multiclass
        clus
vv       16Q LOSS MUTATED 16Q LOSS WILD-TYPE
  CLUS_1                1                 11
  CLUS_2                3                  6
  CLUS_3                4                 21
  CLUS_4               10                 16
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  16Q LOSS MUTATED        0     11      7
  16Q LOSS WILD-TYPE      1     17     36
D69V8, multiclass
        clus
vv       16Q LOSS MUTATED 16Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               11                 17
  CLUS_3                7                 36

Clustering(70) Variable = 17P LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P LOSS MUTATED       14     11     12
  17P LOSS WILD-TYPE     24     28     14
D70V1, multiclass
        clus
vv       17P LOSS MUTATED 17P LOSS WILD-TYPE
  CLUS_1               14                 24
  CLUS_2               11                 28
  CLUS_3               12                 14
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P LOSS MUTATED       24      8      5
  17P LOSS WILD-TYPE     16     35     15
D70V2, multiclass
        clus
vv       17P LOSS MUTATED 17P LOSS WILD-TYPE
  CLUS_1               24                 16
  CLUS_2                8                 35
  CLUS_3                5                 15
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  17P LOSS MUTATED        3      6      3     14
  17P LOSS WILD-TYPE     12     17      4     11
D70V3, multiclass
        clus
vv       17P LOSS MUTATED 17P LOSS WILD-TYPE
  CLUS_1                3                 12
  CLUS_2                6                 17
  CLUS_3                3                  4
  CLUS_4               14                 11
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P LOSS MUTATED       15      1     10
  17P LOSS WILD-TYPE     12      3     29
D70V4, multiclass
        clus
vv       17P LOSS MUTATED 17P LOSS WILD-TYPE
  CLUS_1               15                 12
  CLUS_2                1                  3
  CLUS_3               10                 29
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P LOSS MUTATED        8      3     15
  17P LOSS WILD-TYPE     22     11     13
D70V5, multiclass
        clus
vv       17P LOSS MUTATED 17P LOSS WILD-TYPE
  CLUS_1                8                 22
  CLUS_2                3                 11
  CLUS_3               15                 13
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P LOSS MUTATED        0     15     11
  17P LOSS WILD-TYPE      1     13     32
D70V6, multiclass
        clus
vv       17P LOSS MUTATED 17P LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               15                 13
  CLUS_3               11                 32
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  17P LOSS MUTATED        1      4      7     14
  17P LOSS WILD-TYPE     11      5     18     12
D70V7, multiclass
        clus
vv       17P LOSS MUTATED 17P LOSS WILD-TYPE
  CLUS_1                1                 11
  CLUS_2                4                  5
  CLUS_3                7                 18
  CLUS_4               14                 12
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17P LOSS MUTATED        0     15     11
  17P LOSS WILD-TYPE      1     13     32
D70V8, multiclass
        clus
vv       17P LOSS MUTATED 17P LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               15                 13
  CLUS_3               11                 32

Clustering(71) Variable = 17Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17Q LOSS MUTATED        3      4      3
  17Q LOSS WILD-TYPE     35     35     23
D71V1, multiclass
        clus
vv       17Q LOSS MUTATED 17Q LOSS WILD-TYPE
  CLUS_1                3                 35
  CLUS_2                4                 35
  CLUS_3                3                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17Q LOSS MUTATED        4      3      3
  17Q LOSS WILD-TYPE     36     40     17
D71V2, multiclass
        clus
vv       17Q LOSS MUTATED 17Q LOSS WILD-TYPE
  CLUS_1                4                 36
  CLUS_2                3                 40
  CLUS_3                3                 17
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  17Q LOSS MUTATED        2      4      0      1
  17Q LOSS WILD-TYPE     13     19      7     24
D71V3, multiclass
        clus
vv       17Q LOSS MUTATED 17Q LOSS WILD-TYPE
  CLUS_1                2                 13
  CLUS_2                4                 19
  CLUS_3                0                  7
  CLUS_4                1                 24
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17Q LOSS MUTATED        1      1      5
  17Q LOSS WILD-TYPE     26      3     34
D71V4, multiclass
        clus
vv       17Q LOSS MUTATED 17Q LOSS WILD-TYPE
  CLUS_1                1                 26
  CLUS_2                1                  3
  CLUS_3                5                 34
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17Q LOSS MUTATED        5      1      1
  17Q LOSS WILD-TYPE     25     13     27
D71V5, multiclass
        clus
vv       17Q LOSS MUTATED 17Q LOSS WILD-TYPE
  CLUS_1                5                 25
  CLUS_2                1                 13
  CLUS_3                1                 27
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17Q LOSS MUTATED        0      1      6
  17Q LOSS WILD-TYPE      1     27     37
D71V6, multiclass
        clus
vv       17Q LOSS MUTATED 17Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                1                 27
  CLUS_3                6                 37
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  17Q LOSS MUTATED        0      2      4      1
  17Q LOSS WILD-TYPE     12      7     21     25
D71V7, multiclass
        clus
vv       17Q LOSS MUTATED 17Q LOSS WILD-TYPE
  CLUS_1                0                 12
  CLUS_2                2                  7
  CLUS_3                4                 21
  CLUS_4                1                 25
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  17Q LOSS MUTATED        0      1      6
  17Q LOSS WILD-TYPE      1     27     37
D71V8, multiclass
        clus
vv       17Q LOSS MUTATED 17Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                1                 27
  CLUS_3                6                 37

Clustering(72) Variable = 18P LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P LOSS MUTATED       16      9     11
  18P LOSS WILD-TYPE     22     30     15
D72V1, multiclass
        clus
vv       18P LOSS MUTATED 18P LOSS WILD-TYPE
  CLUS_1               16                 22
  CLUS_2                9                 30
  CLUS_3               11                 15
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P LOSS MUTATED       20     10      6
  18P LOSS WILD-TYPE     20     33     14
D72V2, multiclass
        clus
vv       18P LOSS MUTATED 18P LOSS WILD-TYPE
  CLUS_1               20                 20
  CLUS_2               10                 33
  CLUS_3                6                 14
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18P LOSS MUTATED        6      6      1     11
  18P LOSS WILD-TYPE      9     17      6     14
D72V3, multiclass
        clus
vv       18P LOSS MUTATED 18P LOSS WILD-TYPE
  CLUS_1                6                  9
  CLUS_2                6                 17
  CLUS_3                1                  6
  CLUS_4               11                 14
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P LOSS MUTATED       12      1     11
  18P LOSS WILD-TYPE     15      3     28
D72V4, multiclass
        clus
vv       18P LOSS MUTATED 18P LOSS WILD-TYPE
  CLUS_1               12                 15
  CLUS_2                1                  3
  CLUS_3               11                 28
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P LOSS MUTATED        6      7     12
  18P LOSS WILD-TYPE     24      7     16
D72V5, multiclass
        clus
vv       18P LOSS MUTATED 18P LOSS WILD-TYPE
  CLUS_1                6                 24
  CLUS_2                7                  7
  CLUS_3               12                 16
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P LOSS MUTATED        0     12     13
  18P LOSS WILD-TYPE      1     16     30
D72V6, multiclass
        clus
vv       18P LOSS MUTATED 18P LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               12                 16
  CLUS_3               13                 30
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18P LOSS MUTATED        6      4      4     11
  18P LOSS WILD-TYPE      6      5     21     15
D72V7, multiclass
        clus
vv       18P LOSS MUTATED 18P LOSS WILD-TYPE
  CLUS_1                6                  6
  CLUS_2                4                  5
  CLUS_3                4                 21
  CLUS_4               11                 15
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18P LOSS MUTATED        0     12     13
  18P LOSS WILD-TYPE      1     16     30
D72V8, multiclass
        clus
vv       18P LOSS MUTATED 18P LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               12                 16
  CLUS_3               13                 30

Clustering(73) Variable = 18Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q LOSS MUTATED       19     20     15
  18Q LOSS WILD-TYPE     19     19     11
D73V1, multiclass
        clus
vv       18Q LOSS MUTATED 18Q LOSS WILD-TYPE
  CLUS_1               19                 19
  CLUS_2               20                 19
  CLUS_3               15                 11
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q LOSS MUTATED       25     21      8
  18Q LOSS WILD-TYPE     15     22     12
D73V2, multiclass
        clus
vv       18Q LOSS MUTATED 18Q LOSS WILD-TYPE
  CLUS_1               25                 15
  CLUS_2               21                 22
  CLUS_3                8                 12
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18Q LOSS MUTATED        7     13      3     17
  18Q LOSS WILD-TYPE      8     10      4      8
D73V3, multiclass
        clus
vv       18Q LOSS MUTATED 18Q LOSS WILD-TYPE
  CLUS_1                7                  8
  CLUS_2               13                 10
  CLUS_3                3                  4
  CLUS_4               17                  8
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q LOSS MUTATED       18      1     21
  18Q LOSS WILD-TYPE      9      3     18
D73V4, multiclass
        clus
vv       18Q LOSS MUTATED 18Q LOSS WILD-TYPE
  CLUS_1               18                  9
  CLUS_2                1                  3
  CLUS_3               21                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q LOSS MUTATED       13     10     18
  18Q LOSS WILD-TYPE     17      4     10
D73V5, multiclass
        clus
vv       18Q LOSS MUTATED 18Q LOSS WILD-TYPE
  CLUS_1               13                 17
  CLUS_2               10                  4
  CLUS_3               18                 10
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q LOSS MUTATED        0     18     23
  18Q LOSS WILD-TYPE      1     10     20
D73V6, multiclass
        clus
vv       18Q LOSS MUTATED 18Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               18                 10
  CLUS_3               23                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18Q LOSS MUTATED        9      4     11     17
  18Q LOSS WILD-TYPE      3      5     14      9
D73V7, multiclass
        clus
vv       18Q LOSS MUTATED 18Q LOSS WILD-TYPE
  CLUS_1                9                  3
  CLUS_2                4                  5
  CLUS_3               11                 14
  CLUS_4               17                  9
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  18Q LOSS MUTATED        0     18     23
  18Q LOSS WILD-TYPE      1     10     20
D73V8, multiclass
        clus
vv       18Q LOSS MUTATED 18Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               18                 10
  CLUS_3               23                 20

Clustering(74) Variable = 19P LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P LOSS MUTATED        8     19      6
  19P LOSS WILD-TYPE     30     20     20
D74V1, multiclass
        clus
vv       19P LOSS MUTATED 19P LOSS WILD-TYPE
  CLUS_1                8                 30
  CLUS_2               19                 20
  CLUS_3                6                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P LOSS MUTATED       11     18      4
  19P LOSS WILD-TYPE     29     25     16
D74V2, multiclass
        clus
vv       19P LOSS MUTATED 19P LOSS WILD-TYPE
  CLUS_1               11                 29
  CLUS_2               18                 25
  CLUS_3                4                 16
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19P LOSS MUTATED        5      9      1      8
  19P LOSS WILD-TYPE     10     14      6     17
D74V3, multiclass
        clus
vv       19P LOSS MUTATED 19P LOSS WILD-TYPE
  CLUS_1                5                 10
  CLUS_2                9                 14
  CLUS_3                1                  6
  CLUS_4                8                 17
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P LOSS MUTATED        8      1     14
  19P LOSS WILD-TYPE     19      3     25
D74V4, multiclass
        clus
vv       19P LOSS MUTATED 19P LOSS WILD-TYPE
  CLUS_1                8                 19
  CLUS_2                1                  3
  CLUS_3               14                 25
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P LOSS MUTATED       15      2      8
  19P LOSS WILD-TYPE     15     12     20
D74V5, multiclass
        clus
vv       19P LOSS MUTATED 19P LOSS WILD-TYPE
  CLUS_1               15                 15
  CLUS_2                2                 12
  CLUS_3                8                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P LOSS MUTATED        0      8     17
  19P LOSS WILD-TYPE      1     20     26
D74V6, multiclass
        clus
vv       19P LOSS MUTATED 19P LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                8                 20
  CLUS_3               17                 26
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19P LOSS MUTATED        2      5     12      6
  19P LOSS WILD-TYPE     10      4     13     20
D74V7, multiclass
        clus
vv       19P LOSS MUTATED 19P LOSS WILD-TYPE
  CLUS_1                2                 10
  CLUS_2                5                  4
  CLUS_3               12                 13
  CLUS_4                6                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19P LOSS MUTATED        0      8     17
  19P LOSS WILD-TYPE      1     20     26
D74V8, multiclass
        clus
vv       19P LOSS MUTATED 19P LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                8                 20
  CLUS_3               17                 26

Clustering(75) Variable = 19Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q LOSS MUTATED        6     17      4
  19Q LOSS WILD-TYPE     32     22     22
D75V1, multiclass
        clus
vv       19Q LOSS MUTATED 19Q LOSS WILD-TYPE
  CLUS_1                6                 32
  CLUS_2               17                 22
  CLUS_3                4                 22
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q LOSS MUTATED        7     17      3
  19Q LOSS WILD-TYPE     33     26     17
D75V2, multiclass
        clus
vv       19Q LOSS MUTATED 19Q LOSS WILD-TYPE
  CLUS_1                7                 33
  CLUS_2               17                 26
  CLUS_3                3                 17
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19Q LOSS MUTATED        5      7      2      5
  19Q LOSS WILD-TYPE     10     16      5     20
D75V3, multiclass
        clus
vv       19Q LOSS MUTATED 19Q LOSS WILD-TYPE
  CLUS_1                5                 10
  CLUS_2                7                 16
  CLUS_3                2                  5
  CLUS_4                5                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q LOSS MUTATED        5      1     13
  19Q LOSS WILD-TYPE     22      3     26
D75V4, multiclass
        clus
vv       19Q LOSS MUTATED 19Q LOSS WILD-TYPE
  CLUS_1                5                 22
  CLUS_2                1                  3
  CLUS_3               13                 26
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q LOSS MUTATED       13      2      5
  19Q LOSS WILD-TYPE     17     12     23
D75V5, multiclass
        clus
vv       19Q LOSS MUTATED 19Q LOSS WILD-TYPE
  CLUS_1               13                 17
  CLUS_2                2                 12
  CLUS_3                5                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q LOSS MUTATED        0      5     15
  19Q LOSS WILD-TYPE      1     23     28
D75V6, multiclass
        clus
vv       19Q LOSS MUTATED 19Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                5                 23
  CLUS_3               15                 28
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19Q LOSS MUTATED        2      3     10      5
  19Q LOSS WILD-TYPE     10      6     15     21
D75V7, multiclass
        clus
vv       19Q LOSS MUTATED 19Q LOSS WILD-TYPE
  CLUS_1                2                 10
  CLUS_2                3                  6
  CLUS_3               10                 15
  CLUS_4                5                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  19Q LOSS MUTATED        0      5     15
  19Q LOSS WILD-TYPE      1     23     28
D75V8, multiclass
        clus
vv       19Q LOSS MUTATED 19Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                5                 23
  CLUS_3               15                 28

Clustering(76) Variable = 20P LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20P LOSS MUTATED        5      5      4
  20P LOSS WILD-TYPE     33     34     22
D76V1, multiclass
        clus
vv       20P LOSS MUTATED 20P LOSS WILD-TYPE
  CLUS_1                5                 33
  CLUS_2                5                 34
  CLUS_3                4                 22
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20P LOSS MUTATED        5      7      2
  20P LOSS WILD-TYPE     35     36     18
D76V2, multiclass
        clus
vv       20P LOSS MUTATED 20P LOSS WILD-TYPE
  CLUS_1                5                 35
  CLUS_2                7                 36
  CLUS_3                2                 18
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  20P LOSS MUTATED        1      3      0      4
  20P LOSS WILD-TYPE     14     20      7     21
D76V3, multiclass
        clus
vv       20P LOSS MUTATED 20P LOSS WILD-TYPE
  CLUS_1                1                 14
  CLUS_2                3                 20
  CLUS_3                0                  7
  CLUS_4                4                 21
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20P LOSS MUTATED        4      0      4
  20P LOSS WILD-TYPE     23      4     35
D76V4, multiclass
        clus
vv       20P LOSS MUTATED 20P LOSS WILD-TYPE
  CLUS_1                4                 23
  CLUS_2                0                  4
  CLUS_3                4                 35
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20P LOSS MUTATED        4      0      4
  20P LOSS WILD-TYPE     26     14     24
D76V5, multiclass
        clus
vv       20P LOSS MUTATED 20P LOSS WILD-TYPE
  CLUS_1                4                 26
  CLUS_2                0                 14
  CLUS_3                4                 24
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20P LOSS MUTATED        0      4      4
  20P LOSS WILD-TYPE      1     24     39
D76V6, multiclass
        clus
vv       20P LOSS MUTATED 20P LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                4                 24
  CLUS_3                4                 39
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  20P LOSS MUTATED        0      1      4      3
  20P LOSS WILD-TYPE     12      8     21     23
D76V7, multiclass
        clus
vv       20P LOSS MUTATED 20P LOSS WILD-TYPE
  CLUS_1                0                 12
  CLUS_2                1                  8
  CLUS_3                4                 21
  CLUS_4                3                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20P LOSS MUTATED        0      4      4
  20P LOSS WILD-TYPE      1     24     39
D76V8, multiclass
        clus
vv       20P LOSS MUTATED 20P LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                4                 24
  CLUS_3                4                 39

Clustering(77) Variable = 20Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20Q LOSS MUTATED        2      2      1
  20Q LOSS WILD-TYPE     36     37     25
D77V1, multiclass
        clus
vv       20Q LOSS MUTATED 20Q LOSS WILD-TYPE
  CLUS_1                2                 36
  CLUS_2                2                 37
  CLUS_3                1                 25
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20Q LOSS MUTATED        2      2      1
  20Q LOSS WILD-TYPE     38     41     19
D77V2, multiclass
        clus
vv       20Q LOSS MUTATED 20Q LOSS WILD-TYPE
  CLUS_1                2                 38
  CLUS_2                2                 41
  CLUS_3                1                 19
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  20Q LOSS MUTATED        0      1      0      2
  20Q LOSS WILD-TYPE     15     22      7     23
D77V3, multiclass
        clus
vv       20Q LOSS MUTATED 20Q LOSS WILD-TYPE
  CLUS_1                0                 15
  CLUS_2                1                 22
  CLUS_3                0                  7
  CLUS_4                2                 23
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20Q LOSS MUTATED        2      0      1
  20Q LOSS WILD-TYPE     25      4     38
D77V4, multiclass
        clus
vv       20Q LOSS MUTATED 20Q LOSS WILD-TYPE
  CLUS_1                2                 25
  CLUS_2                0                  4
  CLUS_3                1                 38
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20Q LOSS MUTATED        1      0      2
  20Q LOSS WILD-TYPE     29     14     26
D77V5, multiclass
        clus
vv       20Q LOSS MUTATED 20Q LOSS WILD-TYPE
  CLUS_1                1                 29
  CLUS_2                0                 14
  CLUS_3                2                 26
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20Q LOSS MUTATED        0      2      1
  20Q LOSS WILD-TYPE      1     26     42
D77V6, multiclass
        clus
vv       20Q LOSS MUTATED 20Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                2                 26
  CLUS_3                1                 42
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  20Q LOSS MUTATED        0      0      1      2
  20Q LOSS WILD-TYPE     12      9     24     24
D77V7, multiclass
        clus
vv       20Q LOSS MUTATED 20Q LOSS WILD-TYPE
  CLUS_1                0                 12
  CLUS_2                0                  9
  CLUS_3                1                 24
  CLUS_4                2                 24
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  20Q LOSS MUTATED        0      2      1
  20Q LOSS WILD-TYPE      1     26     42
D77V8, multiclass
        clus
vv       20Q LOSS MUTATED 20Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2                2                 26
  CLUS_3                1                 42

Clustering(78) Variable = 21Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q LOSS MUTATED       19     23     16
  21Q LOSS WILD-TYPE     19     16     10
D78V1, multiclass
        clus
vv       21Q LOSS MUTATED 21Q LOSS WILD-TYPE
  CLUS_1               19                 19
  CLUS_2               23                 16
  CLUS_3               16                 10
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q LOSS MUTATED       28     21      9
  21Q LOSS WILD-TYPE     12     22     11
D78V2, multiclass
        clus
vv       21Q LOSS MUTATED 21Q LOSS WILD-TYPE
  CLUS_1               28                 12
  CLUS_2               21                 22
  CLUS_3                9                 11
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  21Q LOSS MUTATED        5     13      6     20
  21Q LOSS WILD-TYPE     10     10      1      5
D78V3, multiclass
        clus
vv       21Q LOSS MUTATED 21Q LOSS WILD-TYPE
  CLUS_1                5                 10
  CLUS_2               13                 10
  CLUS_3                6                  1
  CLUS_4               20                  5
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q LOSS MUTATED       21      0     23
  21Q LOSS WILD-TYPE      6      4     16
D78V4, multiclass
        clus
vv       21Q LOSS MUTATED 21Q LOSS WILD-TYPE
  CLUS_1               21                  6
  CLUS_2                0                  4
  CLUS_3               23                 16
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q LOSS MUTATED       16      7     21
  21Q LOSS WILD-TYPE     14      7      7
D78V5, multiclass
        clus
vv       21Q LOSS MUTATED 21Q LOSS WILD-TYPE
  CLUS_1               16                 14
  CLUS_2                7                  7
  CLUS_3               21                  7
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q LOSS MUTATED        0     21     23
  21Q LOSS WILD-TYPE      1      7     20
D78V6, multiclass
        clus
vv       21Q LOSS MUTATED 21Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               21                  7
  CLUS_3               23                 20
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  21Q LOSS MUTATED        8      3     13     20
  21Q LOSS WILD-TYPE      4      6     12      6
D78V7, multiclass
        clus
vv       21Q LOSS MUTATED 21Q LOSS WILD-TYPE
  CLUS_1                8                  4
  CLUS_2                3                  6
  CLUS_3               13                 12
  CLUS_4               20                  6
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  21Q LOSS MUTATED        0     21     23
  21Q LOSS WILD-TYPE      1      7     20
D78V8, multiclass
        clus
vv       21Q LOSS MUTATED 21Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               21                  7
  CLUS_3               23                 20

Clustering(79) Variable = 22Q LOSS MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  22Q LOSS MUTATED       11     11     15
  22Q LOSS WILD-TYPE     27     28     11
D79V1, multiclass
        clus
vv       22Q LOSS MUTATED 22Q LOSS WILD-TYPE
  CLUS_1               11                 27
  CLUS_2               11                 28
  CLUS_3               15                 11
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  22Q LOSS MUTATED       20      8      9
  22Q LOSS WILD-TYPE     20     35     11
D79V2, multiclass
        clus
vv       22Q LOSS MUTATED 22Q LOSS WILD-TYPE
  CLUS_1               20                 20
  CLUS_2                8                 35
  CLUS_3                9                 11
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  22Q LOSS MUTATED        3      8      1     13
  22Q LOSS WILD-TYPE     12     15      6     12
D79V3, multiclass
        clus
vv       22Q LOSS MUTATED 22Q LOSS WILD-TYPE
  CLUS_1                3                 12
  CLUS_2                8                 15
  CLUS_3                1                  6
  CLUS_4               13                 12
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  22Q LOSS MUTATED       13      1     11
  22Q LOSS WILD-TYPE     14      3     28
D79V4, multiclass
        clus
vv       22Q LOSS MUTATED 22Q LOSS WILD-TYPE
  CLUS_1               13                 14
  CLUS_2                1                  3
  CLUS_3               11                 28
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  22Q LOSS MUTATED        8      5     13
  22Q LOSS WILD-TYPE     22      9     15
D79V5, multiclass
        clus
vv       22Q LOSS MUTATED 22Q LOSS WILD-TYPE
  CLUS_1                8                 22
  CLUS_2                5                  9
  CLUS_3               13                 15
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  22Q LOSS MUTATED        0     13     13
  22Q LOSS WILD-TYPE      1     15     30
D79V6, multiclass
        clus
vv       22Q LOSS MUTATED 22Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               13                 15
  CLUS_3               13                 30
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  22Q LOSS MUTATED        4      4      6     12
  22Q LOSS WILD-TYPE      8      5     19     14
D79V7, multiclass
        clus
vv       22Q LOSS MUTATED 22Q LOSS WILD-TYPE
  CLUS_1                4                  8
  CLUS_2                4                  5
  CLUS_3                6                 19
  CLUS_4               12                 14
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  22Q LOSS MUTATED        0     13     13
  22Q LOSS WILD-TYPE      1     15     30
D79V8, multiclass
        clus
vv       22Q LOSS MUTATED 22Q LOSS WILD-TYPE
  CLUS_1                0                  1
  CLUS_2               13                 15
  CLUS_3               13                 30

Clustering(80) Variable = XQ LOSS MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ LOSS MUTATED        6     11      7
  XQ LOSS WILD-TYPE     32     28     19
D80V1, multiclass
        clus
vv       XQ LOSS MUTATED XQ LOSS WILD-TYPE
  CLUS_1               6                32
  CLUS_2              11                28
  CLUS_3               7                19
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ LOSS MUTATED       12     11      1
  XQ LOSS WILD-TYPE     28     32     19
D80V2, multiclass
        clus
vv       XQ LOSS MUTATED XQ LOSS WILD-TYPE
  CLUS_1              12                28
  CLUS_2              11                32
  CLUS_3               1                19
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XQ LOSS MUTATED        4      5      0     10
  XQ LOSS WILD-TYPE     11     18      7     15
D80V3, multiclass
        clus
vv       XQ LOSS MUTATED XQ LOSS WILD-TYPE
  CLUS_1               4                11
  CLUS_2               5                18
  CLUS_3               0                 7
  CLUS_4              10                15
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ LOSS MUTATED       10      0      9
  XQ LOSS WILD-TYPE     17      4     30
D80V4, multiclass
        clus
vv       XQ LOSS MUTATED XQ LOSS WILD-TYPE
  CLUS_1              10                17
  CLUS_2               0                 4
  CLUS_3               9                30
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ LOSS MUTATED        7      2     10
  XQ LOSS WILD-TYPE     23     12     18
D80V5, multiclass
        clus
vv       XQ LOSS MUTATED XQ LOSS WILD-TYPE
  CLUS_1               7                23
  CLUS_2               2                12
  CLUS_3              10                18
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ LOSS MUTATED        0     10      9
  XQ LOSS WILD-TYPE      1     18     34
D80V6, multiclass
        clus
vv       XQ LOSS MUTATED XQ LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              10                18
  CLUS_3               9                34
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XQ LOSS MUTATED        1      2      7      9
  XQ LOSS WILD-TYPE     11      7     18     17
D80V7, multiclass
        clus
vv       XQ LOSS MUTATED XQ LOSS WILD-TYPE
  CLUS_1               1                11
  CLUS_2               2                 7
  CLUS_3               7                18
  CLUS_4               9                17
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  XQ LOSS MUTATED        0     10      9
  XQ LOSS WILD-TYPE      1     18     34
D80V8, multiclass
        clus
vv       XQ LOSS MUTATED XQ LOSS WILD-TYPE
  CLUS_1               0                 1
  CLUS_2              10                18
  CLUS_3               9                34
> q(save="no")
