
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/13/Correlate_Genomic_Events.R")
> result <- main("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/13/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-tTRUE", "-iD=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/KIRC-TP/8312369/transformed.cor.cli.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/KIRC-TP/8312253/KIRC-TP.transferedmergedcluster.txt", "-fF=", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=0.05", "-cQ=0.25", "-MF=ONLYSIG", "-oT=KIRC-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=KIRC-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/KIRC-TP/8312253/KIRC-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/KIRC-TP/8312369/transformed.cor.cli.txt"

nPatients in clinical file=523, in cluster file=514, common to both=514
[1]  30 514
[1] "AMP PEAK  1(1Q24.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  1(1Q24.1) MUTATED AMP PEAK  1(1Q24.1) WILD-TYPE 
                           62                           452 
  AMP PEAK  1(1Q24.1) MUTATED AMP PEAK  1(1Q24.1) WILD-TYPE 
                           62                           452 
[1] "AMP PEAK  2(1Q32.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  2(1Q32.1) MUTATED AMP PEAK  2(1Q32.1) WILD-TYPE 
                           62                           452 
  AMP PEAK  2(1Q32.1) MUTATED AMP PEAK  2(1Q32.1) WILD-TYPE 
                           62                           452 
[1] "AMP PEAK  3(3Q26.32) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  3(3Q26.32) MUTATED AMP PEAK  3(3Q26.32) WILD-TYPE 
                            87                            427 
  AMP PEAK  3(3Q26.32) MUTATED AMP PEAK  3(3Q26.32) WILD-TYPE 
                            87                            427 
[1] "AMP PEAK  4(4Q32.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  4(4Q32.1) MUTATED AMP PEAK  4(4Q32.1) WILD-TYPE 
                           16                           498 
  AMP PEAK  4(4Q32.1) MUTATED AMP PEAK  4(4Q32.1) WILD-TYPE 
                           16                           498 
[1] "AMP PEAK  5(5Q35.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  5(5Q35.1) MUTATED AMP PEAK  5(5Q35.1) WILD-TYPE 
                          328                           186 
  AMP PEAK  5(5Q35.1) MUTATED AMP PEAK  5(5Q35.1) WILD-TYPE 
                          328                           186 
[1] "AMP PEAK  6(7Q36.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  6(7Q36.3) MUTATED AMP PEAK  6(7Q36.3) WILD-TYPE 
                          173                           341 
  AMP PEAK  6(7Q36.3) MUTATED AMP PEAK  6(7Q36.3) WILD-TYPE 
                          173                           341 
[1] "AMP PEAK  7(8Q24.22) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  7(8Q24.22) MUTATED AMP PEAK  7(8Q24.22) WILD-TYPE 
                            79                            435 
  AMP PEAK  7(8Q24.22) MUTATED AMP PEAK  7(8Q24.22) WILD-TYPE 
                            79                            435 
[1] "AMP PEAK  8(10P14) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  8(10P14) MUTATED AMP PEAK  8(10P14) WILD-TYPE 
                          20                          494 
  AMP PEAK  8(10P14) MUTATED AMP PEAK  8(10P14) WILD-TYPE 
                          20                          494 
[1] "AMP PEAK  9(XP22.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  9(XP22.2) MUTATED AMP PEAK  9(XP22.2) WILD-TYPE 
                           31                           483 
  AMP PEAK  9(XP22.2) MUTATED AMP PEAK  9(XP22.2) WILD-TYPE 
                           31                           483 
[1] "AMP PEAK 10(XP11.4) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 10(XP11.4) MUTATED AMP PEAK 10(XP11.4) WILD-TYPE 
                           33                           481 
  AMP PEAK 10(XP11.4) MUTATED AMP PEAK 10(XP11.4) WILD-TYPE 
                           33                           481 
[1] "AMP PEAK 11(XQ11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 11(XQ11.2) MUTATED AMP PEAK 11(XQ11.2) WILD-TYPE 
                           29                           485 
  AMP PEAK 11(XQ11.2) MUTATED AMP PEAK 11(XQ11.2) WILD-TYPE 
                           29                           485 
[1] "AMP PEAK 12(XQ28) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 12(XQ28) MUTATED AMP PEAK 12(XQ28) WILD-TYPE 
                         36                         478 
  AMP PEAK 12(XQ28) MUTATED AMP PEAK 12(XQ28) WILD-TYPE 
                         36                         478 
[1] "DEL PEAK  1(1P36.23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  1(1P36.23) MUTATED DEL PEAK  1(1P36.23) WILD-TYPE 
                           101                            413 
  DEL PEAK  1(1P36.23) MUTATED DEL PEAK  1(1P36.23) WILD-TYPE 
                           101                            413 
[1] "DEL PEAK  2(1P31.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  2(1P31.1) MUTATED DEL PEAK  2(1P31.1) WILD-TYPE 
                           75                           439 
  DEL PEAK  2(1P31.1) MUTATED DEL PEAK  2(1P31.1) WILD-TYPE 
                           75                           439 
[1] "DEL PEAK  3(1Q43) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  3(1Q43) MUTATED DEL PEAK  3(1Q43) WILD-TYPE 
                         40                         474 
  DEL PEAK  3(1Q43) MUTATED DEL PEAK  3(1Q43) WILD-TYPE 
                         40                         474 
[1] "DEL PEAK  4(2Q37.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE 
                           50                           464 
  DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE 
                           50                           464 
[1] "DEL PEAK  5(3P25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  5(3P25.3) MUTATED DEL PEAK  5(3P25.3) WILD-TYPE 
                          452                            62 
  DEL PEAK  5(3P25.3) MUTATED DEL PEAK  5(3P25.3) WILD-TYPE 
                          452                            62 
[1] "DEL PEAK  6(3P24.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  6(3P24.3) MUTATED DEL PEAK  6(3P24.3) WILD-TYPE 
                          453                            61 
  DEL PEAK  6(3P24.3) MUTATED DEL PEAK  6(3P24.3) WILD-TYPE 
                          453                            61 
[1] "DEL PEAK  7(3P12.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  7(3P12.3) MUTATED DEL PEAK  7(3P12.3) WILD-TYPE 
                          328                           186 
  DEL PEAK  7(3P12.3) MUTATED DEL PEAK  7(3P12.3) WILD-TYPE 
                          328                           186 
[1] "DEL PEAK  8(3P11.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  8(3P11.1) MUTATED DEL PEAK  8(3P11.1) WILD-TYPE 
                          234                           280 
  DEL PEAK  8(3P11.1) MUTATED DEL PEAK  8(3P11.1) WILD-TYPE 
                          234                           280 
[1] "DEL PEAK  9(3Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  9(3Q11.2) MUTATED DEL PEAK  9(3Q11.2) WILD-TYPE 
                          158                           356 
  DEL PEAK  9(3Q11.2) MUTATED DEL PEAK  9(3Q11.2) WILD-TYPE 
                          158                           356 
[1] "DEL PEAK 10(4Q34.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 10(4Q34.3) MUTATED DEL PEAK 10(4Q34.3) WILD-TYPE 
                           78                           436 
  DEL PEAK 10(4Q34.3) MUTATED DEL PEAK 10(4Q34.3) WILD-TYPE 
                           78                           436 
[1] "DEL PEAK 11(6Q26) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 11(6Q26) MUTATED DEL PEAK 11(6Q26) WILD-TYPE 
                        148                         366 
  DEL PEAK 11(6Q26) MUTATED DEL PEAK 11(6Q26) WILD-TYPE 
                        148                         366 
[1] "DEL PEAK 12(6Q26) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 12(6Q26) MUTATED DEL PEAK 12(6Q26) WILD-TYPE 
                        148                         366 
  DEL PEAK 12(6Q26) MUTATED DEL PEAK 12(6Q26) WILD-TYPE 
                        148                         366 
[1] "DEL PEAK 13(8P23.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE 
                          153                           361 
  DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE 
                          153                           361 
[1] "DEL PEAK 14(9P23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 14(9P23) MUTATED DEL PEAK 14(9P23) WILD-TYPE 
                        149                         365 
  DEL PEAK 14(9P23) MUTATED DEL PEAK 14(9P23) WILD-TYPE 
                        149                         365 
[1] "DEL PEAK 15(9P21.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 15(9P21.3) MUTATED DEL PEAK 15(9P21.3) WILD-TYPE 
                          156                           358 
  DEL PEAK 15(9P21.3) MUTATED DEL PEAK 15(9P21.3) WILD-TYPE 
                          156                           358 
[1] "DEL PEAK 16(10Q23.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE 
                             94                             420 
  DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE 
                             94                             420 
[1] "DEL PEAK 17(13Q14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 17(13Q14.2) MUTATED DEL PEAK 17(13Q14.2) WILD-TYPE 
                            80                            434 
  DEL PEAK 17(13Q14.2) MUTATED DEL PEAK 17(13Q14.2) WILD-TYPE 
                            80                            434 
[1] "DEL PEAK 18(14Q31.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 18(14Q31.1) MUTATED DEL PEAK 18(14Q31.1) WILD-TYPE 
                           224                            290 
  DEL PEAK 18(14Q31.1) MUTATED DEL PEAK 18(14Q31.1) WILD-TYPE 
                           224                            290 
[1] "terrence_modification_tag"
[1] TRUE
[1] "data2feature, selection="
 [1] "MRNA_CNMF"                   "MRNA_CHIERARCHICAL"         
 [3] "CN_CNMF"                     "METHLYATION_CNMF"           
 [5] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [7] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [9] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[11] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 12 rows and 514 columns.

Variable 1:'MRNA_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'MRNA_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'RPPA_CNMF':	nDistinctValues=6,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'RPPA_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MRNASEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 11:'MIRSEQ_MATURE_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 12:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
 [1] "MRNA_CNMF"                   "MRNA_CHIERARCHICAL"         
 [3] "CN_CNMF"                     "METHLYATION_CNMF"           
 [5] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [7] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [9] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[11] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 514 columns, 0 survival variables, and 12 non-survival variables.
MRNA_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNA_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=6, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=5, binary=FALSE, numeric=FALSE

Clustering(1) Variable = AMP PEAK  1(1Q24.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q24.1) MUTATED        3      6      1
  AMP PEAK  1(1Q24.1) WILD-TYPE     30     18     12
D1V1, multiclass
        clus
vv       AMP PEAK  1(1Q24.1) MUTATED AMP PEAK  1(1Q24.1) WILD-TYPE
  CLUS_1                           3                            30
  CLUS_2                           6                            18
  CLUS_3                           1                            12
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q24.1) MUTATED        1      3      6
  AMP PEAK  1(1Q24.1) WILD-TYPE     13     29     18
D1V2, multiclass
        clus
vv       AMP PEAK  1(1Q24.1) MUTATED AMP PEAK  1(1Q24.1) WILD-TYPE
  CLUS_1                           1                            13
  CLUS_2                           3                            29
  CLUS_3                           6                            18
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q24.1) MUTATED       47     12      3
  AMP PEAK  1(1Q24.1) WILD-TYPE    115    211    126
D1V3, multiclass
        clus
vv       AMP PEAK  1(1Q24.1) MUTATED AMP PEAK  1(1Q24.1) WILD-TYPE
  CLUS_1                          47                           115
  CLUS_2                          12                           211
  CLUS_3                           3                           126
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q24.1) MUTATED       10      8     11
  AMP PEAK  1(1Q24.1) WILD-TYPE     90    106     65
D1V4, multiclass
        clus
vv       AMP PEAK  1(1Q24.1) MUTATED AMP PEAK  1(1Q24.1) WILD-TYPE
  CLUS_1                          10                            90
  CLUS_2                           8                           106
  CLUS_3                          11                            65
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  1(1Q24.1) MUTATED       11     11     10      5      5     12
  AMP PEAK  1(1Q24.1) WILD-TYPE     89     77     74     70     38     45
D1V5, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q24.1) MUTATED       18     22     14
  AMP PEAK  1(1Q24.1) WILD-TYPE    168    130     95
D1V6, multiclass
        clus
vv       AMP PEAK  1(1Q24.1) MUTATED AMP PEAK  1(1Q24.1) WILD-TYPE
  CLUS_1                          18                           168
  CLUS_2                          22                           130
  CLUS_3                          14                            95
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q24.1) MUTATED       19      4     37
  AMP PEAK  1(1Q24.1) WILD-TYPE    196    104    150
D1V7, multiclass
        clus
vv       AMP PEAK  1(1Q24.1) MUTATED AMP PEAK  1(1Q24.1) WILD-TYPE
  CLUS_1                          19                           196
  CLUS_2                           4                           104
  CLUS_3                          37                           150
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q24.1) MUTATED       21     37      2
  AMP PEAK  1(1Q24.1) WILD-TYPE    205    168     77
D1V8, multiclass
        clus
vv       AMP PEAK  1(1Q24.1) MUTATED AMP PEAK  1(1Q24.1) WILD-TYPE
  CLUS_1                          21                           205
  CLUS_2                          37                           168
  CLUS_3                           2                            77
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q24.1) MUTATED        4     20     36
  AMP PEAK  1(1Q24.1) WILD-TYPE    106    189    141
D1V9, multiclass
        clus
vv       AMP PEAK  1(1Q24.1) MUTATED AMP PEAK  1(1Q24.1) WILD-TYPE
  CLUS_1                           4                           106
  CLUS_2                          20                           189
  CLUS_3                          36                           141
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q24.1) MUTATED        5     32     23
  AMP PEAK  1(1Q24.1) WILD-TYPE     38    237    161
D1V10, multiclass
        clus
vv       AMP PEAK  1(1Q24.1) MUTATED AMP PEAK  1(1Q24.1) WILD-TYPE
  CLUS_1                           5                            38
  CLUS_2                          32                           237
  CLUS_3                          23                           161
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q24.1) MUTATED        2      8     16
  AMP PEAK  1(1Q24.1) WILD-TYPE     48     91     71
D1V11, multiclass
        clus
vv       AMP PEAK  1(1Q24.1) MUTATED AMP PEAK  1(1Q24.1) WILD-TYPE
  CLUS_1                           2                            48
  CLUS_2                           8                            91
  CLUS_3                          16                            71
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  1(1Q24.1) MUTATED        0      4     16      3      3
  AMP PEAK  1(1Q24.1) WILD-TYPE     11     50     63      8     78
D1V12, multiclass

Clustering(2) Variable = AMP PEAK  2(1Q32.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q32.1) MUTATED        3      5      1
  AMP PEAK  2(1Q32.1) WILD-TYPE     30     19     12
D2V1, multiclass
        clus
vv       AMP PEAK  2(1Q32.1) MUTATED AMP PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                           3                            30
  CLUS_2                           5                            19
  CLUS_3                           1                            12
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q32.1) MUTATED        1      3      5
  AMP PEAK  2(1Q32.1) WILD-TYPE     13     29     19
D2V2, multiclass
        clus
vv       AMP PEAK  2(1Q32.1) MUTATED AMP PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                           1                            13
  CLUS_2                           3                            29
  CLUS_3                           5                            19
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q32.1) MUTATED       49      9      4
  AMP PEAK  2(1Q32.1) WILD-TYPE    113    214    125
D2V3, multiclass
        clus
vv       AMP PEAK  2(1Q32.1) MUTATED AMP PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          49                           113
  CLUS_2                           9                           214
  CLUS_3                           4                           125
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q32.1) MUTATED       11      6     11
  AMP PEAK  2(1Q32.1) WILD-TYPE     89    108     65
D2V4, multiclass
        clus
vv       AMP PEAK  2(1Q32.1) MUTATED AMP PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          11                            89
  CLUS_2                           6                           108
  CLUS_3                          11                            65
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  2(1Q32.1) MUTATED       12     10     12      4      5     12
  AMP PEAK  2(1Q32.1) WILD-TYPE     88     78     72     71     38     45
D2V5, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q32.1) MUTATED       17     26     12
  AMP PEAK  2(1Q32.1) WILD-TYPE    169    126     97
D2V6, multiclass
        clus
vv       AMP PEAK  2(1Q32.1) MUTATED AMP PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          17                           169
  CLUS_2                          26                           126
  CLUS_3                          12                            97
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q32.1) MUTATED       19      3     38
  AMP PEAK  2(1Q32.1) WILD-TYPE    196    105    149
D2V7, multiclass
        clus
vv       AMP PEAK  2(1Q32.1) MUTATED AMP PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          19                           196
  CLUS_2                           3                           105
  CLUS_3                          38                           149
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q32.1) MUTATED       22     37      1
  AMP PEAK  2(1Q32.1) WILD-TYPE    204    168     78
D2V8, multiclass
        clus
vv       AMP PEAK  2(1Q32.1) MUTATED AMP PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          22                           204
  CLUS_2                          37                           168
  CLUS_3                           1                            78
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q32.1) MUTATED        4     19     37
  AMP PEAK  2(1Q32.1) WILD-TYPE    106    190    140
D2V9, multiclass
        clus
vv       AMP PEAK  2(1Q32.1) MUTATED AMP PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                           4                           106
  CLUS_2                          19                           190
  CLUS_3                          37                           140
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q32.1) MUTATED        4     32     24
  AMP PEAK  2(1Q32.1) WILD-TYPE     39    237    160
D2V10, multiclass
        clus
vv       AMP PEAK  2(1Q32.1) MUTATED AMP PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                           4                            39
  CLUS_2                          32                           237
  CLUS_3                          24                           160
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q32.1) MUTATED        2      8     18
  AMP PEAK  2(1Q32.1) WILD-TYPE     48     91     69
D2V11, multiclass
        clus
vv       AMP PEAK  2(1Q32.1) MUTATED AMP PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                           2                            48
  CLUS_2                           8                            91
  CLUS_3                          18                            69
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  2(1Q32.1) MUTATED        0      4     17      2      5
  AMP PEAK  2(1Q32.1) WILD-TYPE     11     50     62      9     76
D2V12, multiclass

Clustering(3) Variable = AMP PEAK  3(3Q26.32) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(3Q26.32) MUTATED        2      7      2
  AMP PEAK  3(3Q26.32) WILD-TYPE     31     17     11
D3V1, multiclass
        clus
vv       AMP PEAK  3(3Q26.32) MUTATED AMP PEAK  3(3Q26.32) WILD-TYPE
  CLUS_1                            2                             31
  CLUS_2                            7                             17
  CLUS_3                            2                             11
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(3Q26.32) MUTATED        2      2      7
  AMP PEAK  3(3Q26.32) WILD-TYPE     12     30     17
D3V2, multiclass
        clus
vv       AMP PEAK  3(3Q26.32) MUTATED AMP PEAK  3(3Q26.32) WILD-TYPE
  CLUS_1                            2                             12
  CLUS_2                            2                             30
  CLUS_3                            7                             17
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(3Q26.32) MUTATED       55     11     21
  AMP PEAK  3(3Q26.32) WILD-TYPE    107    212    108
D3V3, multiclass
        clus
vv       AMP PEAK  3(3Q26.32) MUTATED AMP PEAK  3(3Q26.32) WILD-TYPE
  CLUS_1                           55                            107
  CLUS_2                           11                            212
  CLUS_3                           21                            108
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(3Q26.32) MUTATED       27      7     16
  AMP PEAK  3(3Q26.32) WILD-TYPE     73    107     60
D3V4, multiclass
        clus
vv       AMP PEAK  3(3Q26.32) MUTATED AMP PEAK  3(3Q26.32) WILD-TYPE
  CLUS_1                           27                             73
  CLUS_2                            7                            107
  CLUS_3                           16                             60
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  3(3Q26.32) MUTATED       12     12     16     18      2     18
  AMP PEAK  3(3Q26.32) WILD-TYPE     88     76     68     57     41     39
D3V5, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(3Q26.32) MUTATED       18     25     35
  AMP PEAK  3(3Q26.32) WILD-TYPE    168    127     74
D3V6, multiclass
        clus
vv       AMP PEAK  3(3Q26.32) MUTATED AMP PEAK  3(3Q26.32) WILD-TYPE
  CLUS_1                           18                            168
  CLUS_2                           25                            127
  CLUS_3                           35                             74
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(3Q26.32) MUTATED       19     14     54
  AMP PEAK  3(3Q26.32) WILD-TYPE    196     94    133
D3V7, multiclass
        clus
vv       AMP PEAK  3(3Q26.32) MUTATED AMP PEAK  3(3Q26.32) WILD-TYPE
  CLUS_1                           19                            196
  CLUS_2                           14                             94
  CLUS_3                           54                            133
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(3Q26.32) MUTATED       17     60     10
  AMP PEAK  3(3Q26.32) WILD-TYPE    209    145     69
D3V8, multiclass
        clus
vv       AMP PEAK  3(3Q26.32) MUTATED AMP PEAK  3(3Q26.32) WILD-TYPE
  CLUS_1                           17                            209
  CLUS_2                           60                            145
  CLUS_3                           10                             69
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(3Q26.32) MUTATED       13     16     55
  AMP PEAK  3(3Q26.32) WILD-TYPE     97    193    122
D3V9, multiclass
        clus
vv       AMP PEAK  3(3Q26.32) MUTATED AMP PEAK  3(3Q26.32) WILD-TYPE
  CLUS_1                           13                             97
  CLUS_2                           16                            193
  CLUS_3                           55                            122
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(3Q26.32) MUTATED       14     35     35
  AMP PEAK  3(3Q26.32) WILD-TYPE     29    234    149
D3V10, multiclass
        clus
vv       AMP PEAK  3(3Q26.32) MUTATED AMP PEAK  3(3Q26.32) WILD-TYPE
  CLUS_1                           14                             29
  CLUS_2                           35                            234
  CLUS_3                           35                            149
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(3Q26.32) MUTATED        5     10     27
  AMP PEAK  3(3Q26.32) WILD-TYPE     45     89     60
D3V11, multiclass
        clus
vv       AMP PEAK  3(3Q26.32) MUTATED AMP PEAK  3(3Q26.32) WILD-TYPE
  CLUS_1                            5                             45
  CLUS_2                           10                             89
  CLUS_3                           27                             60
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  3(3Q26.32) MUTATED        3     15     13      0     11
  AMP PEAK  3(3Q26.32) WILD-TYPE      8     39     66     11     70
D3V12, multiclass

Clustering(4) Variable = AMP PEAK  4(4Q32.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(4Q32.1) MUTATED        0      2      1
  AMP PEAK  4(4Q32.1) WILD-TYPE     33     22     12
D4V1, multiclass
        clus
vv       AMP PEAK  4(4Q32.1) MUTATED AMP PEAK  4(4Q32.1) WILD-TYPE
  CLUS_1                           0                            33
  CLUS_2                           2                            22
  CLUS_3                           1                            12
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(4Q32.1) MUTATED        1      0      2
  AMP PEAK  4(4Q32.1) WILD-TYPE     13     32     22
D4V2, multiclass
        clus
vv       AMP PEAK  4(4Q32.1) MUTATED AMP PEAK  4(4Q32.1) WILD-TYPE
  CLUS_1                           1                            13
  CLUS_2                           0                            32
  CLUS_3                           2                            22
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(4Q32.1) MUTATED        6      4      6
  AMP PEAK  4(4Q32.1) WILD-TYPE    156    219    123
D4V3, multiclass
        clus
vv       AMP PEAK  4(4Q32.1) MUTATED AMP PEAK  4(4Q32.1) WILD-TYPE
  CLUS_1                           6                           156
  CLUS_2                           4                           219
  CLUS_3                           6                           123
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(4Q32.1) MUTATED        2      4      1
  AMP PEAK  4(4Q32.1) WILD-TYPE     98    110     75
D4V4, multiclass
        clus
vv       AMP PEAK  4(4Q32.1) MUTATED AMP PEAK  4(4Q32.1) WILD-TYPE
  CLUS_1                           2                            98
  CLUS_2                           4                           110
  CLUS_3                           1                            75
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  4(4Q32.1) MUTATED        1      3      3      3      0      1
  AMP PEAK  4(4Q32.1) WILD-TYPE     99     85     81     72     43     56
D4V5, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(4Q32.1) MUTATED        3      3      5
  AMP PEAK  4(4Q32.1) WILD-TYPE    183    149    104
D4V6, multiclass
        clus
vv       AMP PEAK  4(4Q32.1) MUTATED AMP PEAK  4(4Q32.1) WILD-TYPE
  CLUS_1                           3                           183
  CLUS_2                           3                           149
  CLUS_3                           5                           104
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(4Q32.1) MUTATED        2      7      6
  AMP PEAK  4(4Q32.1) WILD-TYPE    213    101    181
D4V7, multiclass
        clus
vv       AMP PEAK  4(4Q32.1) MUTATED AMP PEAK  4(4Q32.1) WILD-TYPE
  CLUS_1                           2                           213
  CLUS_2                           7                           101
  CLUS_3                           6                           181
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(4Q32.1) MUTATED        4      7      4
  AMP PEAK  4(4Q32.1) WILD-TYPE    222    198     75
D4V8, multiclass
        clus
vv       AMP PEAK  4(4Q32.1) MUTATED AMP PEAK  4(4Q32.1) WILD-TYPE
  CLUS_1                           4                           222
  CLUS_2                           7                           198
  CLUS_3                           4                            75
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(4Q32.1) MUTATED        3      1     12
  AMP PEAK  4(4Q32.1) WILD-TYPE    107    208    165
D4V9, multiclass
        clus
vv       AMP PEAK  4(4Q32.1) MUTATED AMP PEAK  4(4Q32.1) WILD-TYPE
  CLUS_1                           3                           107
  CLUS_2                           1                           208
  CLUS_3                          12                           165
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(4Q32.1) MUTATED        5      4      7
  AMP PEAK  4(4Q32.1) WILD-TYPE     38    265    177
D4V10, multiclass
        clus
vv       AMP PEAK  4(4Q32.1) MUTATED AMP PEAK  4(4Q32.1) WILD-TYPE
  CLUS_1                           5                            38
  CLUS_2                           4                           265
  CLUS_3                           7                           177
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(4Q32.1) MUTATED        0      0      5
  AMP PEAK  4(4Q32.1) WILD-TYPE     50     99     82
D4V11, multiclass
        clus
vv       AMP PEAK  4(4Q32.1) MUTATED AMP PEAK  4(4Q32.1) WILD-TYPE
  CLUS_1                           0                            50
  CLUS_2                           0                            99
  CLUS_3                           5                            82
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  4(4Q32.1) MUTATED        2      1      1      1      0
  AMP PEAK  4(4Q32.1) WILD-TYPE      9     53     78     10     81
D4V12, multiclass

Clustering(5) Variable = AMP PEAK  5(5Q35.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(5Q35.1) MUTATED       20     14      3
  AMP PEAK  5(5Q35.1) WILD-TYPE     13     10     10
D5V1, multiclass
        clus
vv       AMP PEAK  5(5Q35.1) MUTATED AMP PEAK  5(5Q35.1) WILD-TYPE
  CLUS_1                          20                            13
  CLUS_2                          14                            10
  CLUS_3                           3                            10
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(5Q35.1) MUTATED        3     20     14
  AMP PEAK  5(5Q35.1) WILD-TYPE     11     12     10
D5V2, multiclass
        clus
vv       AMP PEAK  5(5Q35.1) MUTATED AMP PEAK  5(5Q35.1) WILD-TYPE
  CLUS_1                           3                            11
  CLUS_2                          20                            12
  CLUS_3                          14                            10
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(5Q35.1) MUTATED      113    148     67
  AMP PEAK  5(5Q35.1) WILD-TYPE     49     75     62
D5V3, multiclass
        clus
vv       AMP PEAK  5(5Q35.1) MUTATED AMP PEAK  5(5Q35.1) WILD-TYPE
  CLUS_1                         113                            49
  CLUS_2                         148                            75
  CLUS_3                          67                            62
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(5Q35.1) MUTATED       64     74     45
  AMP PEAK  5(5Q35.1) WILD-TYPE     36     40     31
D5V4, multiclass
        clus
vv       AMP PEAK  5(5Q35.1) MUTATED AMP PEAK  5(5Q35.1) WILD-TYPE
  CLUS_1                          64                            36
  CLUS_2                          74                            40
  CLUS_3                          45                            31
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  5(5Q35.1) MUTATED       65     47     67     45     30     34
  AMP PEAK  5(5Q35.1) WILD-TYPE     35     41     17     30     13     23
D5V5, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(5Q35.1) MUTATED      121    110     57
  AMP PEAK  5(5Q35.1) WILD-TYPE     65     42     52
D5V6, multiclass
        clus
vv       AMP PEAK  5(5Q35.1) MUTATED AMP PEAK  5(5Q35.1) WILD-TYPE
  CLUS_1                         121                            65
  CLUS_2                         110                            42
  CLUS_3                          57                            52
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(5Q35.1) MUTATED      147     53    126
  AMP PEAK  5(5Q35.1) WILD-TYPE     68     55     61
D5V7, multiclass
        clus
vv       AMP PEAK  5(5Q35.1) MUTATED AMP PEAK  5(5Q35.1) WILD-TYPE
  CLUS_1                         147                            68
  CLUS_2                          53                            55
  CLUS_3                         126                            61
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(5Q35.1) MUTATED      157    135     34
  AMP PEAK  5(5Q35.1) WILD-TYPE     69     70     45
D5V8, multiclass
        clus
vv       AMP PEAK  5(5Q35.1) MUTATED AMP PEAK  5(5Q35.1) WILD-TYPE
  CLUS_1                         157                            69
  CLUS_2                         135                            70
  CLUS_3                          34                            45
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(5Q35.1) MUTATED       64    144    111
  AMP PEAK  5(5Q35.1) WILD-TYPE     46     65     66
D5V9, multiclass
        clus
vv       AMP PEAK  5(5Q35.1) MUTATED AMP PEAK  5(5Q35.1) WILD-TYPE
  CLUS_1                          64                            46
  CLUS_2                         144                            65
  CLUS_3                         111                            66
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(5Q35.1) MUTATED       20    185    114
  AMP PEAK  5(5Q35.1) WILD-TYPE     23     84     70
D5V10, multiclass
        clus
vv       AMP PEAK  5(5Q35.1) MUTATED AMP PEAK  5(5Q35.1) WILD-TYPE
  CLUS_1                          20                            23
  CLUS_2                         185                            84
  CLUS_3                         114                            70
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(5Q35.1) MUTATED       33     68     58
  AMP PEAK  5(5Q35.1) WILD-TYPE     17     31     29
D5V11, multiclass
        clus
vv       AMP PEAK  5(5Q35.1) MUTATED AMP PEAK  5(5Q35.1) WILD-TYPE
  CLUS_1                          33                            17
  CLUS_2                          68                            31
  CLUS_3                          58                            29
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  5(5Q35.1) MUTATED        3     36     53      9     58
  AMP PEAK  5(5Q35.1) WILD-TYPE      8     18     26      2     23
D5V12, multiclass

Clustering(6) Variable = AMP PEAK  6(7Q36.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(7Q36.3) MUTATED        9      9      6
  AMP PEAK  6(7Q36.3) WILD-TYPE     24     15      7
D6V1, multiclass
        clus
vv       AMP PEAK  6(7Q36.3) MUTATED AMP PEAK  6(7Q36.3) WILD-TYPE
  CLUS_1                           9                            24
  CLUS_2                           9                            15
  CLUS_3                           6                             7
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(7Q36.3) MUTATED        6      9      9
  AMP PEAK  6(7Q36.3) WILD-TYPE      8     23     15
D6V2, multiclass
        clus
vv       AMP PEAK  6(7Q36.3) MUTATED AMP PEAK  6(7Q36.3) WILD-TYPE
  CLUS_1                           6                             8
  CLUS_2                           9                            23
  CLUS_3                           9                            15
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(7Q36.3) MUTATED       86     35     52
  AMP PEAK  6(7Q36.3) WILD-TYPE     76    188     77
D6V3, multiclass
        clus
vv       AMP PEAK  6(7Q36.3) MUTATED AMP PEAK  6(7Q36.3) WILD-TYPE
  CLUS_1                          86                            76
  CLUS_2                          35                           188
  CLUS_3                          52                            77
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(7Q36.3) MUTATED       41     29     18
  AMP PEAK  6(7Q36.3) WILD-TYPE     59     85     58
D6V4, multiclass
        clus
vv       AMP PEAK  6(7Q36.3) MUTATED AMP PEAK  6(7Q36.3) WILD-TYPE
  CLUS_1                          41                            59
  CLUS_2                          29                            85
  CLUS_3                          18                            58
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  6(7Q36.3) MUTATED       22     23     34     33     10     30
  AMP PEAK  6(7Q36.3) WILD-TYPE     78     65     50     42     33     27
D6V5, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(7Q36.3) MUTATED       48     59     45
  AMP PEAK  6(7Q36.3) WILD-TYPE    138     93     64
D6V6, multiclass
        clus
vv       AMP PEAK  6(7Q36.3) MUTATED AMP PEAK  6(7Q36.3) WILD-TYPE
  CLUS_1                          48                           138
  CLUS_2                          59                            93
  CLUS_3                          45                            64
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(7Q36.3) MUTATED       52     34     85
  AMP PEAK  6(7Q36.3) WILD-TYPE    163     74    102
D6V7, multiclass
        clus
vv       AMP PEAK  6(7Q36.3) MUTATED AMP PEAK  6(7Q36.3) WILD-TYPE
  CLUS_1                          52                           163
  CLUS_2                          34                            74
  CLUS_3                          85                           102
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(7Q36.3) MUTATED       60     86     25
  AMP PEAK  6(7Q36.3) WILD-TYPE    166    119     54
D6V8, multiclass
        clus
vv       AMP PEAK  6(7Q36.3) MUTATED AMP PEAK  6(7Q36.3) WILD-TYPE
  CLUS_1                          60                           166
  CLUS_2                          86                           119
  CLUS_3                          25                            54
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(7Q36.3) MUTATED       35     59     76
  AMP PEAK  6(7Q36.3) WILD-TYPE     75    150    101
D6V9, multiclass
        clus
vv       AMP PEAK  6(7Q36.3) MUTATED AMP PEAK  6(7Q36.3) WILD-TYPE
  CLUS_1                          35                            75
  CLUS_2                          59                           150
  CLUS_3                          76                           101
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(7Q36.3) MUTATED       17     84     69
  AMP PEAK  6(7Q36.3) WILD-TYPE     26    185    115
D6V10, multiclass
        clus
vv       AMP PEAK  6(7Q36.3) MUTATED AMP PEAK  6(7Q36.3) WILD-TYPE
  CLUS_1                          17                            26
  CLUS_2                          84                           185
  CLUS_3                          69                           115
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(7Q36.3) MUTATED       18     26     40
  AMP PEAK  6(7Q36.3) WILD-TYPE     32     73     47
D6V11, multiclass
        clus
vv       AMP PEAK  6(7Q36.3) MUTATED AMP PEAK  6(7Q36.3) WILD-TYPE
  CLUS_1                          18                            32
  CLUS_2                          26                            73
  CLUS_3                          40                            47
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  6(7Q36.3) MUTATED        2     25     36      3     18
  AMP PEAK  6(7Q36.3) WILD-TYPE      9     29     43      8     63
D6V12, multiclass

Clustering(7) Variable = AMP PEAK  7(8Q24.22) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(8Q24.22) MUTATED        1      3      2
  AMP PEAK  7(8Q24.22) WILD-TYPE     32     21     11
D7V1, multiclass
        clus
vv       AMP PEAK  7(8Q24.22) MUTATED AMP PEAK  7(8Q24.22) WILD-TYPE
  CLUS_1                            1                             32
  CLUS_2                            3                             21
  CLUS_3                            2                             11
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(8Q24.22) MUTATED        2      1      3
  AMP PEAK  7(8Q24.22) WILD-TYPE     12     31     21
D7V2, multiclass
        clus
vv       AMP PEAK  7(8Q24.22) MUTATED AMP PEAK  7(8Q24.22) WILD-TYPE
  CLUS_1                            2                             12
  CLUS_2                            1                             31
  CLUS_3                            3                             21
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(8Q24.22) MUTATED       58      2     19
  AMP PEAK  7(8Q24.22) WILD-TYPE    104    221    110
D7V3, multiclass
        clus
vv       AMP PEAK  7(8Q24.22) MUTATED AMP PEAK  7(8Q24.22) WILD-TYPE
  CLUS_1                           58                            104
  CLUS_2                            2                            221
  CLUS_3                           19                            110
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(8Q24.22) MUTATED       32      6     14
  AMP PEAK  7(8Q24.22) WILD-TYPE     68    108     62
D7V4, multiclass
        clus
vv       AMP PEAK  7(8Q24.22) MUTATED AMP PEAK  7(8Q24.22) WILD-TYPE
  CLUS_1                           32                             68
  CLUS_2                            6                            108
  CLUS_3                           14                             62
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  7(8Q24.22) MUTATED        6     14     16     12      1     22
  AMP PEAK  7(8Q24.22) WILD-TYPE     94     74     68     63     42     35
D7V5, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(8Q24.22) MUTATED       20     24     27
  AMP PEAK  7(8Q24.22) WILD-TYPE    166    128     82
D7V6, multiclass
        clus
vv       AMP PEAK  7(8Q24.22) MUTATED AMP PEAK  7(8Q24.22) WILD-TYPE
  CLUS_1                           20                            166
  CLUS_2                           24                            128
  CLUS_3                           27                             82
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(8Q24.22) MUTATED        9     10     59
  AMP PEAK  7(8Q24.22) WILD-TYPE    206     98    128
D7V7, multiclass
        clus
vv       AMP PEAK  7(8Q24.22) MUTATED AMP PEAK  7(8Q24.22) WILD-TYPE
  CLUS_1                            9                            206
  CLUS_2                           10                             98
  CLUS_3                           59                            128
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(8Q24.22) MUTATED       13     61      4
  AMP PEAK  7(8Q24.22) WILD-TYPE    213    144     75
D7V8, multiclass
        clus
vv       AMP PEAK  7(8Q24.22) MUTATED AMP PEAK  7(8Q24.22) WILD-TYPE
  CLUS_1                           13                            213
  CLUS_2                           61                            144
  CLUS_3                            4                             75
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(8Q24.22) MUTATED       13     12     52
  AMP PEAK  7(8Q24.22) WILD-TYPE     97    197    125
D7V9, multiclass
        clus
vv       AMP PEAK  7(8Q24.22) MUTATED AMP PEAK  7(8Q24.22) WILD-TYPE
  CLUS_1                           13                             97
  CLUS_2                           12                            197
  CLUS_3                           52                            125
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(8Q24.22) MUTATED       10     26     41
  AMP PEAK  7(8Q24.22) WILD-TYPE     33    243    143
D7V10, multiclass
        clus
vv       AMP PEAK  7(8Q24.22) MUTATED AMP PEAK  7(8Q24.22) WILD-TYPE
  CLUS_1                           10                             33
  CLUS_2                           26                            243
  CLUS_3                           41                            143
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(8Q24.22) MUTATED        3      5     27
  AMP PEAK  7(8Q24.22) WILD-TYPE     47     94     60
D7V11, multiclass
        clus
vv       AMP PEAK  7(8Q24.22) MUTATED AMP PEAK  7(8Q24.22) WILD-TYPE
  CLUS_1                            3                             47
  CLUS_2                            5                             94
  CLUS_3                           27                             60
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  7(8Q24.22) MUTATED        1     11     20      1      2
  AMP PEAK  7(8Q24.22) WILD-TYPE     10     43     59     10     79
D7V12, multiclass

Clustering(8) Variable = AMP PEAK  8(10P14) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(10P14) MUTATED        0      2      1
  AMP PEAK  8(10P14) WILD-TYPE     33     22     12
D8V1, multiclass
        clus
vv       AMP PEAK  8(10P14) MUTATED AMP PEAK  8(10P14) WILD-TYPE
  CLUS_1                          0                           33
  CLUS_2                          2                           22
  CLUS_3                          1                           12
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(10P14) MUTATED        1      0      2
  AMP PEAK  8(10P14) WILD-TYPE     13     32     22
D8V2, multiclass
        clus
vv       AMP PEAK  8(10P14) MUTATED AMP PEAK  8(10P14) WILD-TYPE
  CLUS_1                          1                           13
  CLUS_2                          0                           32
  CLUS_3                          2                           22
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(10P14) MUTATED       13      1      6
  AMP PEAK  8(10P14) WILD-TYPE    149    222    123
D8V3, multiclass
        clus
vv       AMP PEAK  8(10P14) MUTATED AMP PEAK  8(10P14) WILD-TYPE
  CLUS_1                         13                          149
  CLUS_2                          1                          222
  CLUS_3                          6                          123
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(10P14) MUTATED        4      2      6
  AMP PEAK  8(10P14) WILD-TYPE     96    112     70
D8V4, multiclass
        clus
vv       AMP PEAK  8(10P14) MUTATED AMP PEAK  8(10P14) WILD-TYPE
  CLUS_1                          4                           96
  CLUS_2                          2                          112
  CLUS_3                          6                           70
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  8(10P14) MUTATED        3      3      5      2      2      4
  AMP PEAK  8(10P14) WILD-TYPE     97     85     79     73     41     53
D8V5, multiclass
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(10P14) MUTATED        7      4      8
  AMP PEAK  8(10P14) WILD-TYPE    179    148    101
D8V6, multiclass
        clus
vv       AMP PEAK  8(10P14) MUTATED AMP PEAK  8(10P14) WILD-TYPE
  CLUS_1                          7                          179
  CLUS_2                          4                          148
  CLUS_3                          8                          101
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(10P14) MUTATED        2      4     14
  AMP PEAK  8(10P14) WILD-TYPE    213    104    173
D8V7, multiclass
        clus
vv       AMP PEAK  8(10P14) MUTATED AMP PEAK  8(10P14) WILD-TYPE
  CLUS_1                          2                          213
  CLUS_2                          4                          104
  CLUS_3                         14                          173
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(10P14) MUTATED        2     17      1
  AMP PEAK  8(10P14) WILD-TYPE    224    188     78
D8V8, multiclass
        clus
vv       AMP PEAK  8(10P14) MUTATED AMP PEAK  8(10P14) WILD-TYPE
  CLUS_1                          2                          224
  CLUS_2                         17                          188
  CLUS_3                          1                           78
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(10P14) MUTATED        5      4     11
  AMP PEAK  8(10P14) WILD-TYPE    105    205    166
D8V9, multiclass
        clus
vv       AMP PEAK  8(10P14) MUTATED AMP PEAK  8(10P14) WILD-TYPE
  CLUS_1                          5                          105
  CLUS_2                          4                          205
  CLUS_3                         11                          166
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(10P14) MUTATED        2      7     11
  AMP PEAK  8(10P14) WILD-TYPE     41    262    173
D8V10, multiclass
        clus
vv       AMP PEAK  8(10P14) MUTATED AMP PEAK  8(10P14) WILD-TYPE
  CLUS_1                          2                           41
  CLUS_2                          7                          262
  CLUS_3                         11                          173
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(10P14) MUTATED        3      3      3
  AMP PEAK  8(10P14) WILD-TYPE     47     96     84
D8V11, multiclass
        clus
vv       AMP PEAK  8(10P14) MUTATED AMP PEAK  8(10P14) WILD-TYPE
  CLUS_1                          3                           47
  CLUS_2                          3                           96
  CLUS_3                          3                           84
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  8(10P14) MUTATED        0      3      6      0      0
  AMP PEAK  8(10P14) WILD-TYPE     11     51     73     11     81
D8V12, multiclass

Clustering(9) Variable = AMP PEAK  9(XP22.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(XP22.2) MUTATED        2      2      1
  AMP PEAK  9(XP22.2) WILD-TYPE     31     22     12
D9V1, multiclass
        clus
vv       AMP PEAK  9(XP22.2) MUTATED AMP PEAK  9(XP22.2) WILD-TYPE
  CLUS_1                           2                            31
  CLUS_2                           2                            22
  CLUS_3                           1                            12
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(XP22.2) MUTATED        1      2      2
  AMP PEAK  9(XP22.2) WILD-TYPE     13     30     22
D9V2, multiclass
        clus
vv       AMP PEAK  9(XP22.2) MUTATED AMP PEAK  9(XP22.2) WILD-TYPE
  CLUS_1                           1                            13
  CLUS_2                           2                            30
  CLUS_3                           2                            22
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(XP22.2) MUTATED       18      7      6
  AMP PEAK  9(XP22.2) WILD-TYPE    144    216    123
D9V3, multiclass
        clus
vv       AMP PEAK  9(XP22.2) MUTATED AMP PEAK  9(XP22.2) WILD-TYPE
  CLUS_1                          18                           144
  CLUS_2                           7                           216
  CLUS_3                           6                           123
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(XP22.2) MUTATED        6      2      3
  AMP PEAK  9(XP22.2) WILD-TYPE     94    112     73
D9V4, multiclass
        clus
vv       AMP PEAK  9(XP22.2) MUTATED AMP PEAK  9(XP22.2) WILD-TYPE
  CLUS_1                           6                            94
  CLUS_2                           2                           112
  CLUS_3                           3                            73
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  9(XP22.2) MUTATED        0      3      7     10      1      4
  AMP PEAK  9(XP22.2) WILD-TYPE    100     85     77     65     42     53
D9V5, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(XP22.2) MUTATED        6      6     13
  AMP PEAK  9(XP22.2) WILD-TYPE    180    146     96
D9V6, multiclass
        clus
vv       AMP PEAK  9(XP22.2) MUTATED AMP PEAK  9(XP22.2) WILD-TYPE
  CLUS_1                           6                           180
  CLUS_2                           6                           146
  CLUS_3                          13                            96
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(XP22.2) MUTATED        7      8     16
  AMP PEAK  9(XP22.2) WILD-TYPE    208    100    171
D9V7, multiclass
        clus
vv       AMP PEAK  9(XP22.2) MUTATED AMP PEAK  9(XP22.2) WILD-TYPE
  CLUS_1                           7                           208
  CLUS_2                           8                           100
  CLUS_3                          16                           171
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(XP22.2) MUTATED        9     17      5
  AMP PEAK  9(XP22.2) WILD-TYPE    217    188     74
D9V8, multiclass
        clus
vv       AMP PEAK  9(XP22.2) MUTATED AMP PEAK  9(XP22.2) WILD-TYPE
  CLUS_1                           9                           217
  CLUS_2                          17                           188
  CLUS_3                           5                            74
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(XP22.2) MUTATED        6      8     17
  AMP PEAK  9(XP22.2) WILD-TYPE    104    201    160
D9V9, multiclass
        clus
vv       AMP PEAK  9(XP22.2) MUTATED AMP PEAK  9(XP22.2) WILD-TYPE
  CLUS_1                           6                           104
  CLUS_2                           8                           201
  CLUS_3                          17                           160
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(XP22.2) MUTATED        4     15     12
  AMP PEAK  9(XP22.2) WILD-TYPE     39    254    172
D9V10, multiclass
        clus
vv       AMP PEAK  9(XP22.2) MUTATED AMP PEAK  9(XP22.2) WILD-TYPE
  CLUS_1                           4                            39
  CLUS_2                          15                           254
  CLUS_3                          12                           172
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(XP22.2) MUTATED        2      3      7
  AMP PEAK  9(XP22.2) WILD-TYPE     48     96     80
D9V11, multiclass
        clus
vv       AMP PEAK  9(XP22.2) MUTATED AMP PEAK  9(XP22.2) WILD-TYPE
  CLUS_1                           2                            48
  CLUS_2                           3                            96
  CLUS_3                           7                            80
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  9(XP22.2) MUTATED        0      5      5      0      2
  AMP PEAK  9(XP22.2) WILD-TYPE     11     49     74     11     79
D9V12, multiclass

Clustering(10) Variable = AMP PEAK 10(XP11.4) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(XP11.4) MUTATED        3      1      1
  AMP PEAK 10(XP11.4) WILD-TYPE     30     23     12
D10V1, multiclass
        clus
vv       AMP PEAK 10(XP11.4) MUTATED AMP PEAK 10(XP11.4) WILD-TYPE
  CLUS_1                           3                            30
  CLUS_2                           1                            23
  CLUS_3                           1                            12
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(XP11.4) MUTATED        1      3      1
  AMP PEAK 10(XP11.4) WILD-TYPE     13     29     23
D10V2, multiclass
        clus
vv       AMP PEAK 10(XP11.4) MUTATED AMP PEAK 10(XP11.4) WILD-TYPE
  CLUS_1                           1                            13
  CLUS_2                           3                            29
  CLUS_3                           1                            23
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(XP11.4) MUTATED       19      7      7
  AMP PEAK 10(XP11.4) WILD-TYPE    143    216    122
D10V3, multiclass
        clus
vv       AMP PEAK 10(XP11.4) MUTATED AMP PEAK 10(XP11.4) WILD-TYPE
  CLUS_1                          19                           143
  CLUS_2                           7                           216
  CLUS_3                           7                           122
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(XP11.4) MUTATED        9      3      3
  AMP PEAK 10(XP11.4) WILD-TYPE     91    111     73
D10V4, multiclass
        clus
vv       AMP PEAK 10(XP11.4) MUTATED AMP PEAK 10(XP11.4) WILD-TYPE
  CLUS_1                           9                            91
  CLUS_2                           3                           111
  CLUS_3                           3                            73
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 10(XP11.4) MUTATED        0      5      5     10      0      5
  AMP PEAK 10(XP11.4) WILD-TYPE    100     83     79     65     43     52
D10V5, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(XP11.4) MUTATED        7      4     14
  AMP PEAK 10(XP11.4) WILD-TYPE    179    148     95
D10V6, multiclass
        clus
vv       AMP PEAK 10(XP11.4) MUTATED AMP PEAK 10(XP11.4) WILD-TYPE
  CLUS_1                           7                           179
  CLUS_2                           4                           148
  CLUS_3                          14                            95
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(XP11.4) MUTATED        7      9     17
  AMP PEAK 10(XP11.4) WILD-TYPE    208     99    170
D10V7, multiclass
        clus
vv       AMP PEAK 10(XP11.4) MUTATED AMP PEAK 10(XP11.4) WILD-TYPE
  CLUS_1                           7                           208
  CLUS_2                           9                            99
  CLUS_3                          17                           170
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(XP11.4) MUTATED       10     19      4
  AMP PEAK 10(XP11.4) WILD-TYPE    216    186     75
D10V8, multiclass
        clus
vv       AMP PEAK 10(XP11.4) MUTATED AMP PEAK 10(XP11.4) WILD-TYPE
  CLUS_1                          10                           216
  CLUS_2                          19                           186
  CLUS_3                           4                            75
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(XP11.4) MUTATED        6      8     18
  AMP PEAK 10(XP11.4) WILD-TYPE    104    201    159
D10V9, multiclass
        clus
vv       AMP PEAK 10(XP11.4) MUTATED AMP PEAK 10(XP11.4) WILD-TYPE
  CLUS_1                           6                           104
  CLUS_2                           8                           201
  CLUS_3                          18                           159
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(XP11.4) MUTATED        4     15     13
  AMP PEAK 10(XP11.4) WILD-TYPE     39    254    171
D10V10, multiclass
        clus
vv       AMP PEAK 10(XP11.4) MUTATED AMP PEAK 10(XP11.4) WILD-TYPE
  CLUS_1                           4                            39
  CLUS_2                          15                           254
  CLUS_3                          13                           171
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(XP11.4) MUTATED        2      3      8
  AMP PEAK 10(XP11.4) WILD-TYPE     48     96     79
D10V11, multiclass
        clus
vv       AMP PEAK 10(XP11.4) MUTATED AMP PEAK 10(XP11.4) WILD-TYPE
  CLUS_1                           2                            48
  CLUS_2                           3                            96
  CLUS_3                           8                            79
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 10(XP11.4) MUTATED        0      6      5      0      2
  AMP PEAK 10(XP11.4) WILD-TYPE     11     48     74     11     79
D10V12, multiclass

Clustering(11) Variable = AMP PEAK 11(XQ11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(XQ11.2) MUTATED        2      0      2
  AMP PEAK 11(XQ11.2) WILD-TYPE     31     24     11
D11V1, multiclass
        clus
vv       AMP PEAK 11(XQ11.2) MUTATED AMP PEAK 11(XQ11.2) WILD-TYPE
  CLUS_1                           2                            31
  CLUS_2                           0                            24
  CLUS_3                           2                            11
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(XQ11.2) MUTATED        2      2      0
  AMP PEAK 11(XQ11.2) WILD-TYPE     12     30     24
D11V2, multiclass
        clus
vv       AMP PEAK 11(XQ11.2) MUTATED AMP PEAK 11(XQ11.2) WILD-TYPE
  CLUS_1                           2                            12
  CLUS_2                           2                            30
  CLUS_3                           0                            24
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(XQ11.2) MUTATED       13      8      8
  AMP PEAK 11(XQ11.2) WILD-TYPE    149    215    121
D11V3, multiclass
        clus
vv       AMP PEAK 11(XQ11.2) MUTATED AMP PEAK 11(XQ11.2) WILD-TYPE
  CLUS_1                          13                           149
  CLUS_2                           8                           215
  CLUS_3                           8                           121
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(XQ11.2) MUTATED        5      2      3
  AMP PEAK 11(XQ11.2) WILD-TYPE     95    112     73
D11V4, multiclass
        clus
vv       AMP PEAK 11(XQ11.2) MUTATED AMP PEAK 11(XQ11.2) WILD-TYPE
  CLUS_1                           5                            95
  CLUS_2                           2                           112
  CLUS_3                           3                            73
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 11(XQ11.2) MUTATED        2      4      5      8      0      4
  AMP PEAK 11(XQ11.2) WILD-TYPE     98     84     79     67     43     53
D11V5, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(XQ11.2) MUTATED        7      5     11
  AMP PEAK 11(XQ11.2) WILD-TYPE    179    147     98
D11V6, multiclass
        clus
vv       AMP PEAK 11(XQ11.2) MUTATED AMP PEAK 11(XQ11.2) WILD-TYPE
  CLUS_1                           7                           179
  CLUS_2                           5                           147
  CLUS_3                          11                            98
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(XQ11.2) MUTATED        8      9     12
  AMP PEAK 11(XQ11.2) WILD-TYPE    207     99    175
D11V7, multiclass
        clus
vv       AMP PEAK 11(XQ11.2) MUTATED AMP PEAK 11(XQ11.2) WILD-TYPE
  CLUS_1                           8                           207
  CLUS_2                           9                            99
  CLUS_3                          12                           175
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(XQ11.2) MUTATED       10     14      5
  AMP PEAK 11(XQ11.2) WILD-TYPE    216    191     74
D11V8, multiclass
        clus
vv       AMP PEAK 11(XQ11.2) MUTATED AMP PEAK 11(XQ11.2) WILD-TYPE
  CLUS_1                          10                           216
  CLUS_2                          14                           191
  CLUS_3                           5                            74
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(XQ11.2) MUTATED        5      8     15
  AMP PEAK 11(XQ11.2) WILD-TYPE    105    201    162
D11V9, multiclass
        clus
vv       AMP PEAK 11(XQ11.2) MUTATED AMP PEAK 11(XQ11.2) WILD-TYPE
  CLUS_1                           5                           105
  CLUS_2                           8                           201
  CLUS_3                          15                           162
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(XQ11.2) MUTATED        4     13     11
  AMP PEAK 11(XQ11.2) WILD-TYPE     39    256    173
D11V10, multiclass
        clus
vv       AMP PEAK 11(XQ11.2) MUTATED AMP PEAK 11(XQ11.2) WILD-TYPE
  CLUS_1                           4                            39
  CLUS_2                          13                           256
  CLUS_3                          11                           173
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(XQ11.2) MUTATED        1      3      7
  AMP PEAK 11(XQ11.2) WILD-TYPE     49     96     80
D11V11, multiclass
        clus
vv       AMP PEAK 11(XQ11.2) MUTATED AMP PEAK 11(XQ11.2) WILD-TYPE
  CLUS_1                           1                            49
  CLUS_2                           3                            96
  CLUS_3                           7                            80
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 11(XQ11.2) MUTATED        0      5      4      0      2
  AMP PEAK 11(XQ11.2) WILD-TYPE     11     49     75     11     79
D11V12, multiclass

Clustering(12) Variable = AMP PEAK 12(XQ28) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(XQ28) MUTATED        2      1      2
  AMP PEAK 12(XQ28) WILD-TYPE     31     23     11
D12V1, multiclass
        clus
vv       AMP PEAK 12(XQ28) MUTATED AMP PEAK 12(XQ28) WILD-TYPE
  CLUS_1                         2                          31
  CLUS_2                         1                          23
  CLUS_3                         2                          11
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(XQ28) MUTATED        2      2      1
  AMP PEAK 12(XQ28) WILD-TYPE     12     30     23
D12V2, multiclass
        clus
vv       AMP PEAK 12(XQ28) MUTATED AMP PEAK 12(XQ28) WILD-TYPE
  CLUS_1                         2                          12
  CLUS_2                         2                          30
  CLUS_3                         1                          23
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(XQ28) MUTATED       17     13      6
  AMP PEAK 12(XQ28) WILD-TYPE    145    210    123
D12V3, multiclass
        clus
vv       AMP PEAK 12(XQ28) MUTATED AMP PEAK 12(XQ28) WILD-TYPE
  CLUS_1                        17                         145
  CLUS_2                        13                         210
  CLUS_3                         6                         123
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(XQ28) MUTATED        8      7      5
  AMP PEAK 12(XQ28) WILD-TYPE     92    107     71
D12V4, multiclass
        clus
vv       AMP PEAK 12(XQ28) MUTATED AMP PEAK 12(XQ28) WILD-TYPE
  CLUS_1                         8                          92
  CLUS_2                         7                         107
  CLUS_3                         5                          71
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 12(XQ28) MUTATED        3      5      9      9      0      5
  AMP PEAK 12(XQ28) WILD-TYPE     97     83     75     66     43     52
D12V5, multiclass
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(XQ28) MUTATED        8     10     13
  AMP PEAK 12(XQ28) WILD-TYPE    178    142     96
D12V6, multiclass
        clus
vv       AMP PEAK 12(XQ28) MUTATED AMP PEAK 12(XQ28) WILD-TYPE
  CLUS_1                         8                         178
  CLUS_2                        10                         142
  CLUS_3                        13                          96
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(XQ28) MUTATED        9      9     17
  AMP PEAK 12(XQ28) WILD-TYPE    206     99    170
D12V7, multiclass
        clus
vv       AMP PEAK 12(XQ28) MUTATED AMP PEAK 12(XQ28) WILD-TYPE
  CLUS_1                         9                         206
  CLUS_2                         9                          99
  CLUS_3                        17                         170
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(XQ28) MUTATED       10     22      3
  AMP PEAK 12(XQ28) WILD-TYPE    216    183     76
D12V8, multiclass
        clus
vv       AMP PEAK 12(XQ28) MUTATED AMP PEAK 12(XQ28) WILD-TYPE
  CLUS_1                        10                         216
  CLUS_2                        22                         183
  CLUS_3                         3                          76
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(XQ28) MUTATED        9      9     17
  AMP PEAK 12(XQ28) WILD-TYPE    101    200    160
D12V9, multiclass
        clus
vv       AMP PEAK 12(XQ28) MUTATED AMP PEAK 12(XQ28) WILD-TYPE
  CLUS_1                         9                         101
  CLUS_2                         9                         200
  CLUS_3                        17                         160
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(XQ28) MUTATED        5     14     16
  AMP PEAK 12(XQ28) WILD-TYPE     38    255    168
D12V10, multiclass
        clus
vv       AMP PEAK 12(XQ28) MUTATED AMP PEAK 12(XQ28) WILD-TYPE
  CLUS_1                         5                          38
  CLUS_2                        14                         255
  CLUS_3                        16                         168
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(XQ28) MUTATED        4      3     10
  AMP PEAK 12(XQ28) WILD-TYPE     46     96     77
D12V11, multiclass
        clus
vv       AMP PEAK 12(XQ28) MUTATED AMP PEAK 12(XQ28) WILD-TYPE
  CLUS_1                         4                          46
  CLUS_2                         3                          96
  CLUS_3                        10                          77
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 12(XQ28) MUTATED        0      8      4      1      4
  AMP PEAK 12(XQ28) WILD-TYPE     11     46     75     10     77
D12V12, multiclass

Clustering(13) Variable = DEL PEAK  1(1P36.23) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.23) MUTATED        2      8      8
  DEL PEAK  1(1P36.23) WILD-TYPE     31     16      5
D13V1, multiclass
        clus
vv       DEL PEAK  1(1P36.23) MUTATED DEL PEAK  1(1P36.23) WILD-TYPE
  CLUS_1                            2                             31
  CLUS_2                            8                             16
  CLUS_3                            8                              5
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.23) MUTATED        9      2      7
  DEL PEAK  1(1P36.23) WILD-TYPE      5     30     17
D13V2, multiclass
        clus
vv       DEL PEAK  1(1P36.23) MUTATED DEL PEAK  1(1P36.23) WILD-TYPE
  CLUS_1                            9                              5
  CLUS_2                            2                             30
  CLUS_3                            7                             17
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.23) MUTATED       54     11     36
  DEL PEAK  1(1P36.23) WILD-TYPE    108    212     93
D13V3, multiclass
        clus
vv       DEL PEAK  1(1P36.23) MUTATED DEL PEAK  1(1P36.23) WILD-TYPE
  CLUS_1                           54                            108
  CLUS_2                           11                            212
  CLUS_3                           36                             93
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.23) MUTATED       23     14     20
  DEL PEAK  1(1P36.23) WILD-TYPE     77    100     56
D13V4, multiclass
        clus
vv       DEL PEAK  1(1P36.23) MUTATED DEL PEAK  1(1P36.23) WILD-TYPE
  CLUS_1                           23                             77
  CLUS_2                           14                            100
  CLUS_3                           20                             56
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  1(1P36.23) MUTATED        9     10     23     24      5     18
  DEL PEAK  1(1P36.23) WILD-TYPE     91     78     61     51     38     39
D13V5, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.23) MUTATED       20     37     32
  DEL PEAK  1(1P36.23) WILD-TYPE    166    115     77
D13V6, multiclass
        clus
vv       DEL PEAK  1(1P36.23) MUTATED DEL PEAK  1(1P36.23) WILD-TYPE
  CLUS_1                           20                            166
  CLUS_2                           37                            115
  CLUS_3                           32                             77
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.23) MUTATED       25     20     56
  DEL PEAK  1(1P36.23) WILD-TYPE    190     88    131
D13V7, multiclass
        clus
vv       DEL PEAK  1(1P36.23) MUTATED DEL PEAK  1(1P36.23) WILD-TYPE
  CLUS_1                           25                            190
  CLUS_2                           20                             88
  CLUS_3                           56                            131
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.23) MUTATED       28     54     19
  DEL PEAK  1(1P36.23) WILD-TYPE    198    151     60
D13V8, multiclass
        clus
vv       DEL PEAK  1(1P36.23) MUTATED DEL PEAK  1(1P36.23) WILD-TYPE
  CLUS_1                           28                            198
  CLUS_2                           54                            151
  CLUS_3                           19                             60
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.23) MUTATED       19     24     58
  DEL PEAK  1(1P36.23) WILD-TYPE     91    185    119
D13V9, multiclass
        clus
vv       DEL PEAK  1(1P36.23) MUTATED DEL PEAK  1(1P36.23) WILD-TYPE
  CLUS_1                           19                             91
  CLUS_2                           24                            185
  CLUS_3                           58                            119
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.23) MUTATED       23     34     44
  DEL PEAK  1(1P36.23) WILD-TYPE     20    235    140
D13V10, multiclass
        clus
vv       DEL PEAK  1(1P36.23) MUTATED DEL PEAK  1(1P36.23) WILD-TYPE
  CLUS_1                           23                             20
  CLUS_2                           34                            235
  CLUS_3                           44                            140
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.23) MUTATED        9     11     28
  DEL PEAK  1(1P36.23) WILD-TYPE     41     88     59
D13V11, multiclass
        clus
vv       DEL PEAK  1(1P36.23) MUTATED DEL PEAK  1(1P36.23) WILD-TYPE
  CLUS_1                            9                             41
  CLUS_2                           11                             88
  CLUS_3                           28                             59
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.23) MUTATED        6     14     21      1      6
  DEL PEAK  1(1P36.23) WILD-TYPE      5     40     58     10     75
D13V12, multiclass

Clustering(14) Variable = DEL PEAK  2(1P31.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P31.1) MUTATED        2      5      7
  DEL PEAK  2(1P31.1) WILD-TYPE     31     19      6
D14V1, multiclass
        clus
vv       DEL PEAK  2(1P31.1) MUTATED DEL PEAK  2(1P31.1) WILD-TYPE
  CLUS_1                           2                            31
  CLUS_2                           5                            19
  CLUS_3                           7                             6
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P31.1) MUTATED        8      2      4
  DEL PEAK  2(1P31.1) WILD-TYPE      6     30     20
D14V2, multiclass
        clus
vv       DEL PEAK  2(1P31.1) MUTATED DEL PEAK  2(1P31.1) WILD-TYPE
  CLUS_1                           8                             6
  CLUS_2                           2                            30
  CLUS_3                           4                            20
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P31.1) MUTATED       40      7     28
  DEL PEAK  2(1P31.1) WILD-TYPE    122    216    101
D14V3, multiclass
        clus
vv       DEL PEAK  2(1P31.1) MUTATED DEL PEAK  2(1P31.1) WILD-TYPE
  CLUS_1                          40                           122
  CLUS_2                           7                           216
  CLUS_3                          28                           101
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P31.1) MUTATED       20     10     11
  DEL PEAK  2(1P31.1) WILD-TYPE     80    104     65
D14V4, multiclass
        clus
vv       DEL PEAK  2(1P31.1) MUTATED DEL PEAK  2(1P31.1) WILD-TYPE
  CLUS_1                          20                            80
  CLUS_2                          10                           104
  CLUS_3                          11                            65
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  2(1P31.1) MUTATED       10      4     13     21      4     15
  DEL PEAK  2(1P31.1) WILD-TYPE     90     84     71     54     39     42
D14V5, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P31.1) MUTATED       17     26     24
  DEL PEAK  2(1P31.1) WILD-TYPE    169    126     85
D14V6, multiclass
        clus
vv       DEL PEAK  2(1P31.1) MUTATED DEL PEAK  2(1P31.1) WILD-TYPE
  CLUS_1                          17                           169
  CLUS_2                          26                           126
  CLUS_3                          24                            85
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P31.1) MUTATED       20     19     36
  DEL PEAK  2(1P31.1) WILD-TYPE    195     89    151
D14V7, multiclass
        clus
vv       DEL PEAK  2(1P31.1) MUTATED DEL PEAK  2(1P31.1) WILD-TYPE
  CLUS_1                          20                           195
  CLUS_2                          19                            89
  CLUS_3                          36                           151
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P31.1) MUTATED       20     36     19
  DEL PEAK  2(1P31.1) WILD-TYPE    206    169     60
D14V8, multiclass
        clus
vv       DEL PEAK  2(1P31.1) MUTATED DEL PEAK  2(1P31.1) WILD-TYPE
  CLUS_1                          20                           206
  CLUS_2                          36                           169
  CLUS_3                          19                            60
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P31.1) MUTATED       10     20     45
  DEL PEAK  2(1P31.1) WILD-TYPE    100    189    132
D14V9, multiclass
        clus
vv       DEL PEAK  2(1P31.1) MUTATED DEL PEAK  2(1P31.1) WILD-TYPE
  CLUS_1                          10                           100
  CLUS_2                          20                           189
  CLUS_3                          45                           132
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P31.1) MUTATED       21     30     24
  DEL PEAK  2(1P31.1) WILD-TYPE     22    239    160
D14V10, multiclass
        clus
vv       DEL PEAK  2(1P31.1) MUTATED DEL PEAK  2(1P31.1) WILD-TYPE
  CLUS_1                          21                            22
  CLUS_2                          30                           239
  CLUS_3                          24                           160
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P31.1) MUTATED        5      9     19
  DEL PEAK  2(1P31.1) WILD-TYPE     45     90     68
D14V11, multiclass
        clus
vv       DEL PEAK  2(1P31.1) MUTATED DEL PEAK  2(1P31.1) WILD-TYPE
  CLUS_1                           5                            45
  CLUS_2                           9                            90
  CLUS_3                          19                            68
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(1P31.1) MUTATED        5      7     17      1      3
  DEL PEAK  2(1P31.1) WILD-TYPE      6     47     62     10     78
D14V12, multiclass

Clustering(15) Variable = DEL PEAK  3(1Q43) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q43) MUTATED        2      1      5
  DEL PEAK  3(1Q43) WILD-TYPE     31     23      8
D15V1, multiclass
        clus
vv       DEL PEAK  3(1Q43) MUTATED DEL PEAK  3(1Q43) WILD-TYPE
  CLUS_1                         2                          31
  CLUS_2                         1                          23
  CLUS_3                         5                           8
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q43) MUTATED        5      2      1
  DEL PEAK  3(1Q43) WILD-TYPE      9     30     23
D15V2, multiclass
        clus
vv       DEL PEAK  3(1Q43) MUTATED DEL PEAK  3(1Q43) WILD-TYPE
  CLUS_1                         5                           9
  CLUS_2                         2                          30
  CLUS_3                         1                          23
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q43) MUTATED       11      5     24
  DEL PEAK  3(1Q43) WILD-TYPE    151    218    105
D15V3, multiclass
        clus
vv       DEL PEAK  3(1Q43) MUTATED DEL PEAK  3(1Q43) WILD-TYPE
  CLUS_1                        11                         151
  CLUS_2                         5                         218
  CLUS_3                        24                         105
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q43) MUTATED        9     10      3
  DEL PEAK  3(1Q43) WILD-TYPE     91    104     73
D15V4, multiclass
        clus
vv       DEL PEAK  3(1Q43) MUTATED DEL PEAK  3(1Q43) WILD-TYPE
  CLUS_1                         9                          91
  CLUS_2                        10                         104
  CLUS_3                         3                          73
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  3(1Q43) MUTATED        9      1      5     13      2      5
  DEL PEAK  3(1Q43) WILD-TYPE     91     87     79     62     41     52
D15V5, multiclass
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q43) MUTATED       10      9     16
  DEL PEAK  3(1Q43) WILD-TYPE    176    143     93
D15V6, multiclass
        clus
vv       DEL PEAK  3(1Q43) MUTATED DEL PEAK  3(1Q43) WILD-TYPE
  CLUS_1                        10                         176
  CLUS_2                         9                         143
  CLUS_3                        16                          93
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q43) MUTATED       14     17      9
  DEL PEAK  3(1Q43) WILD-TYPE    201     91    178
D15V7, multiclass
        clus
vv       DEL PEAK  3(1Q43) MUTATED DEL PEAK  3(1Q43) WILD-TYPE
  CLUS_1                        14                         201
  CLUS_2                        17                          91
  CLUS_3                         9                         178
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q43) MUTATED       13     13     14
  DEL PEAK  3(1Q43) WILD-TYPE    213    192     65
D15V8, multiclass
        clus
vv       DEL PEAK  3(1Q43) MUTATED DEL PEAK  3(1Q43) WILD-TYPE
  CLUS_1                        13                         213
  CLUS_2                        13                         192
  CLUS_3                        14                          65
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q43) MUTATED        6     15     19
  DEL PEAK  3(1Q43) WILD-TYPE    104    194    158
D15V9, multiclass
        clus
vv       DEL PEAK  3(1Q43) MUTATED DEL PEAK  3(1Q43) WILD-TYPE
  CLUS_1                         6                         104
  CLUS_2                        15                         194
  CLUS_3                        19                         158
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q43) MUTATED       15     15     10
  DEL PEAK  3(1Q43) WILD-TYPE     28    254    174
D15V10, multiclass
        clus
vv       DEL PEAK  3(1Q43) MUTATED DEL PEAK  3(1Q43) WILD-TYPE
  CLUS_1                        15                          28
  CLUS_2                        15                         254
  CLUS_3                        10                         174
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q43) MUTATED        4      8      7
  DEL PEAK  3(1Q43) WILD-TYPE     46     91     80
D15V11, multiclass
        clus
vv       DEL PEAK  3(1Q43) MUTATED DEL PEAK  3(1Q43) WILD-TYPE
  CLUS_1                         4                          46
  CLUS_2                         8                          91
  CLUS_3                         7                          80
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(1Q43) MUTATED        5      5      4      1      4
  DEL PEAK  3(1Q43) WILD-TYPE      6     49     75     10     77
D15V12, multiclass

Clustering(16) Variable = DEL PEAK  4(2Q37.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.3) MUTATED        1      4      6
  DEL PEAK  4(2Q37.3) WILD-TYPE     32     20      7
D16V1, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                           1                            32
  CLUS_2                           4                            20
  CLUS_3                           6                             7
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.3) MUTATED        6      1      4
  DEL PEAK  4(2Q37.3) WILD-TYPE      8     31     20
D16V2, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                           6                             8
  CLUS_2                           1                            31
  CLUS_3                           4                            20
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.3) MUTATED       18     19     13
  DEL PEAK  4(2Q37.3) WILD-TYPE    144    204    116
D16V3, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                          18                           144
  CLUS_2                          19                           204
  CLUS_3                          13                           116
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.3) MUTATED       10     12      7
  DEL PEAK  4(2Q37.3) WILD-TYPE     90    102     69
D16V4, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                          10                            90
  CLUS_2                          12                           102
  CLUS_3                           7                            69
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  4(2Q37.3) MUTATED        4      9      5     10      3      8
  DEL PEAK  4(2Q37.3) WILD-TYPE     96     79     79     65     40     49
D16V5, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.3) MUTATED       16     10     13
  DEL PEAK  4(2Q37.3) WILD-TYPE    170    142     96
D16V6, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                          16                           170
  CLUS_2                          10                           142
  CLUS_3                          13                            96
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.3) MUTATED        9     21     19
  DEL PEAK  4(2Q37.3) WILD-TYPE    206     87    168
D16V7, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                           9                           206
  CLUS_2                          21                            87
  CLUS_3                          19                           168
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.3) MUTATED        9     27     13
  DEL PEAK  4(2Q37.3) WILD-TYPE    217    178     66
D16V8, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                           9                           217
  CLUS_2                          27                           178
  CLUS_3                          13                            66
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.3) MUTATED       12     11     25
  DEL PEAK  4(2Q37.3) WILD-TYPE     98    198    152
D16V9, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                          12                            98
  CLUS_2                          11                           198
  CLUS_3                          25                           152
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.3) MUTATED       12     17     19
  DEL PEAK  4(2Q37.3) WILD-TYPE     31    252    165
D16V10, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                          12                            31
  CLUS_2                          17                           252
  CLUS_3                          19                           165
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.3) MUTATED        4      4     13
  DEL PEAK  4(2Q37.3) WILD-TYPE     46     95     74
D16V11, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                           4                            46
  CLUS_2                           4                            95
  CLUS_3                          13                            74
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(2Q37.3) MUTATED        4      4     10      0      3
  DEL PEAK  4(2Q37.3) WILD-TYPE      7     50     69     11     78
D16V12, multiclass

Clustering(17) Variable = DEL PEAK  5(3P25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P25.3) MUTATED       32     22      3
  DEL PEAK  5(3P25.3) WILD-TYPE      1      2     10
D17V1, multiclass
        clus
vv       DEL PEAK  5(3P25.3) MUTATED DEL PEAK  5(3P25.3) WILD-TYPE
  CLUS_1                          32                             1
  CLUS_2                          22                             2
  CLUS_3                           3                            10
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P25.3) MUTATED        3     31     23
  DEL PEAK  5(3P25.3) WILD-TYPE     11      1      1
D17V2, multiclass
        clus
vv       DEL PEAK  5(3P25.3) MUTATED DEL PEAK  5(3P25.3) WILD-TYPE
  CLUS_1                           3                            11
  CLUS_2                          31                             1
  CLUS_3                          23                             1
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P25.3) MUTATED      157    222     73
  DEL PEAK  5(3P25.3) WILD-TYPE      5      1     56
D17V3, multiclass
        clus
vv       DEL PEAK  5(3P25.3) MUTATED DEL PEAK  5(3P25.3) WILD-TYPE
  CLUS_1                         157                             5
  CLUS_2                         222                             1
  CLUS_3                          73                            56
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P25.3) MUTATED       96    107     56
  DEL PEAK  5(3P25.3) WILD-TYPE      4      7     20
D17V4, multiclass
        clus
vv       DEL PEAK  5(3P25.3) MUTATED DEL PEAK  5(3P25.3) WILD-TYPE
  CLUS_1                          96                             4
  CLUS_2                         107                             7
  CLUS_3                          56                            20
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  5(3P25.3) MUTATED       99     74     76     56     40     52
  DEL PEAK  5(3P25.3) WILD-TYPE      1     14      8     19      3      5
D17V5, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P25.3) MUTATED      167    141     89
  DEL PEAK  5(3P25.3) WILD-TYPE     19     11     20
D17V6, multiclass
        clus
vv       DEL PEAK  5(3P25.3) MUTATED DEL PEAK  5(3P25.3) WILD-TYPE
  CLUS_1                         167                            19
  CLUS_2                         141                            11
  CLUS_3                          89                            20
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P25.3) MUTATED      208     71    169
  DEL PEAK  5(3P25.3) WILD-TYPE      7     37     18
D17V7, multiclass
        clus
vv       DEL PEAK  5(3P25.3) MUTATED DEL PEAK  5(3P25.3) WILD-TYPE
  CLUS_1                         208                             7
  CLUS_2                          71                            37
  CLUS_3                         169                            18
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P25.3) MUTATED      218    186     44
  DEL PEAK  5(3P25.3) WILD-TYPE      8     19     35
D17V8, multiclass
        clus
vv       DEL PEAK  5(3P25.3) MUTATED DEL PEAK  5(3P25.3) WILD-TYPE
  CLUS_1                         218                             8
  CLUS_2                         186                            19
  CLUS_3                          44                            35
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P25.3) MUTATED       92    201    142
  DEL PEAK  5(3P25.3) WILD-TYPE     18      8     35
D17V9, multiclass
        clus
vv       DEL PEAK  5(3P25.3) MUTATED DEL PEAK  5(3P25.3) WILD-TYPE
  CLUS_1                          92                            18
  CLUS_2                         201                             8
  CLUS_3                         142                            35
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P25.3) MUTATED       26    253    156
  DEL PEAK  5(3P25.3) WILD-TYPE     17     16     28
D17V10, multiclass
        clus
vv       DEL PEAK  5(3P25.3) MUTATED DEL PEAK  5(3P25.3) WILD-TYPE
  CLUS_1                          26                            17
  CLUS_2                         253                            16
  CLUS_3                         156                            28
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P25.3) MUTATED       38     94     72
  DEL PEAK  5(3P25.3) WILD-TYPE     12      5     15
D17V11, multiclass
        clus
vv       DEL PEAK  5(3P25.3) MUTATED DEL PEAK  5(3P25.3) WILD-TYPE
  CLUS_1                          38                            12
  CLUS_2                          94                             5
  CLUS_3                          72                            15
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(3P25.3) MUTATED        1     41     74     10     78
  DEL PEAK  5(3P25.3) WILD-TYPE     10     13      5      1      3
D17V12, multiclass

Clustering(18) Variable = DEL PEAK  6(3P24.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P24.3) MUTATED       32     22      3
  DEL PEAK  6(3P24.3) WILD-TYPE      1      2     10
D18V1, multiclass
        clus
vv       DEL PEAK  6(3P24.3) MUTATED DEL PEAK  6(3P24.3) WILD-TYPE
  CLUS_1                          32                             1
  CLUS_2                          22                             2
  CLUS_3                           3                            10
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P24.3) MUTATED        3     31     23
  DEL PEAK  6(3P24.3) WILD-TYPE     11      1      1
D18V2, multiclass
        clus
vv       DEL PEAK  6(3P24.3) MUTATED DEL PEAK  6(3P24.3) WILD-TYPE
  CLUS_1                           3                            11
  CLUS_2                          31                             1
  CLUS_3                          23                             1
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P24.3) MUTATED      157    223     73
  DEL PEAK  6(3P24.3) WILD-TYPE      5      0     56
D18V3, multiclass
        clus
vv       DEL PEAK  6(3P24.3) MUTATED DEL PEAK  6(3P24.3) WILD-TYPE
  CLUS_1                         157                             5
  CLUS_2                         223                             0
  CLUS_3                          73                            56
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P24.3) MUTATED       96    107     56
  DEL PEAK  6(3P24.3) WILD-TYPE      4      7     20
D18V4, multiclass
        clus
vv       DEL PEAK  6(3P24.3) MUTATED DEL PEAK  6(3P24.3) WILD-TYPE
  CLUS_1                          96                             4
  CLUS_2                         107                             7
  CLUS_3                          56                            20
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  6(3P24.3) MUTATED       99     74     76     57     40     52
  DEL PEAK  6(3P24.3) WILD-TYPE      1     14      8     18      3      5
D18V5, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P24.3) MUTATED      168    141     89
  DEL PEAK  6(3P24.3) WILD-TYPE     18     11     20
D18V6, multiclass
        clus
vv       DEL PEAK  6(3P24.3) MUTATED DEL PEAK  6(3P24.3) WILD-TYPE
  CLUS_1                         168                            18
  CLUS_2                         141                            11
  CLUS_3                          89                            20
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P24.3) MUTATED      209     71    169
  DEL PEAK  6(3P24.3) WILD-TYPE      6     37     18
D18V7, multiclass
        clus
vv       DEL PEAK  6(3P24.3) MUTATED DEL PEAK  6(3P24.3) WILD-TYPE
  CLUS_1                         209                             6
  CLUS_2                          71                            37
  CLUS_3                         169                            18
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P24.3) MUTATED      219    186     44
  DEL PEAK  6(3P24.3) WILD-TYPE      7     19     35
D18V8, multiclass
        clus
vv       DEL PEAK  6(3P24.3) MUTATED DEL PEAK  6(3P24.3) WILD-TYPE
  CLUS_1                         219                             7
  CLUS_2                         186                            19
  CLUS_3                          44                            35
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P24.3) MUTATED       92    202    142
  DEL PEAK  6(3P24.3) WILD-TYPE     18      7     35
D18V9, multiclass
        clus
vv       DEL PEAK  6(3P24.3) MUTATED DEL PEAK  6(3P24.3) WILD-TYPE
  CLUS_1                          92                            18
  CLUS_2                         202                             7
  CLUS_3                         142                            35
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P24.3) MUTATED       26    254    156
  DEL PEAK  6(3P24.3) WILD-TYPE     17     15     28
D18V10, multiclass
        clus
vv       DEL PEAK  6(3P24.3) MUTATED DEL PEAK  6(3P24.3) WILD-TYPE
  CLUS_1                          26                            17
  CLUS_2                         254                            15
  CLUS_3                         156                            28
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P24.3) MUTATED       38     94     72
  DEL PEAK  6(3P24.3) WILD-TYPE     12      5     15
D18V11, multiclass
        clus
vv       DEL PEAK  6(3P24.3) MUTATED DEL PEAK  6(3P24.3) WILD-TYPE
  CLUS_1                          38                            12
  CLUS_2                          94                             5
  CLUS_3                          72                            15
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(3P24.3) MUTATED        1     41     74     10     78
  DEL PEAK  6(3P24.3) WILD-TYPE     10     13      5      1      3
D18V12, multiclass

Clustering(19) Variable = DEL PEAK  7(3P12.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P12.3) MUTATED       20     17      2
  DEL PEAK  7(3P12.3) WILD-TYPE     13      7     11
D19V1, multiclass
        clus
vv       DEL PEAK  7(3P12.3) MUTATED DEL PEAK  7(3P12.3) WILD-TYPE
  CLUS_1                          20                            13
  CLUS_2                          17                             7
  CLUS_3                           2                            11
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P12.3) MUTATED        2     19     18
  DEL PEAK  7(3P12.3) WILD-TYPE     12     13      6
D19V2, multiclass
        clus
vv       DEL PEAK  7(3P12.3) MUTATED DEL PEAK  7(3P12.3) WILD-TYPE
  CLUS_1                           2                            12
  CLUS_2                          19                            13
  CLUS_3                          18                             6
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P12.3) MUTATED      145    157     26
  DEL PEAK  7(3P12.3) WILD-TYPE     17     66    103
D19V3, multiclass
        clus
vv       DEL PEAK  7(3P12.3) MUTATED DEL PEAK  7(3P12.3) WILD-TYPE
  CLUS_1                         145                            17
  CLUS_2                         157                            66
  CLUS_3                          26                           103
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P12.3) MUTATED       72     79     40
  DEL PEAK  7(3P12.3) WILD-TYPE     28     35     36
D19V4, multiclass
        clus
vv       DEL PEAK  7(3P12.3) MUTATED DEL PEAK  7(3P12.3) WILD-TYPE
  CLUS_1                          72                            28
  CLUS_2                          79                            35
  CLUS_3                          40                            36
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  7(3P12.3) MUTATED       69     49     55     45     28     38
  DEL PEAK  7(3P12.3) WILD-TYPE     31     39     29     30     15     19
D19V5, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P12.3) MUTATED      117    102     65
  DEL PEAK  7(3P12.3) WILD-TYPE     69     50     44
D19V6, multiclass
        clus
vv       DEL PEAK  7(3P12.3) MUTATED DEL PEAK  7(3P12.3) WILD-TYPE
  CLUS_1                         117                            69
  CLUS_2                         102                            50
  CLUS_3                          65                            44
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P12.3) MUTATED      149     48    129
  DEL PEAK  7(3P12.3) WILD-TYPE     66     60     58
D19V7, multiclass
        clus
vv       DEL PEAK  7(3P12.3) MUTATED DEL PEAK  7(3P12.3) WILD-TYPE
  CLUS_1                         149                            66
  CLUS_2                          48                            60
  CLUS_3                         129                            58
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P12.3) MUTATED      157    141     28
  DEL PEAK  7(3P12.3) WILD-TYPE     69     64     51
D19V8, multiclass
        clus
vv       DEL PEAK  7(3P12.3) MUTATED DEL PEAK  7(3P12.3) WILD-TYPE
  CLUS_1                         157                            69
  CLUS_2                         141                            64
  CLUS_3                          28                            51
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P12.3) MUTATED       59    142    116
  DEL PEAK  7(3P12.3) WILD-TYPE     51     67     61
D19V9, multiclass
        clus
vv       DEL PEAK  7(3P12.3) MUTATED DEL PEAK  7(3P12.3) WILD-TYPE
  CLUS_1                          59                            51
  CLUS_2                         142                            67
  CLUS_3                         116                            61
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P12.3) MUTATED       22    187    108
  DEL PEAK  7(3P12.3) WILD-TYPE     21     82     76
D19V10, multiclass
        clus
vv       DEL PEAK  7(3P12.3) MUTATED DEL PEAK  7(3P12.3) WILD-TYPE
  CLUS_1                          22                            21
  CLUS_2                         187                            82
  CLUS_3                         108                            76
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P12.3) MUTATED       24     65     63
  DEL PEAK  7(3P12.3) WILD-TYPE     26     34     24
D19V11, multiclass
        clus
vv       DEL PEAK  7(3P12.3) MUTATED DEL PEAK  7(3P12.3) WILD-TYPE
  CLUS_1                          24                            26
  CLUS_2                          65                            34
  CLUS_3                          63                            24
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(3P12.3) MUTATED        1     29     61      7     54
  DEL PEAK  7(3P12.3) WILD-TYPE     10     25     18      4     27
D19V12, multiclass

Clustering(20) Variable = DEL PEAK  8(3P11.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P11.1) MUTATED       13     11      2
  DEL PEAK  8(3P11.1) WILD-TYPE     20     13     11
D20V1, multiclass
        clus
vv       DEL PEAK  8(3P11.1) MUTATED DEL PEAK  8(3P11.1) WILD-TYPE
  CLUS_1                          13                            20
  CLUS_2                          11                            13
  CLUS_3                           2                            11
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P11.1) MUTATED        2     12     12
  DEL PEAK  8(3P11.1) WILD-TYPE     12     20     12
D20V2, multiclass
        clus
vv       DEL PEAK  8(3P11.1) MUTATED DEL PEAK  8(3P11.1) WILD-TYPE
  CLUS_1                           2                            12
  CLUS_2                          12                            20
  CLUS_3                          12                            12
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P11.1) MUTATED      112    108     14
  DEL PEAK  8(3P11.1) WILD-TYPE     50    115    115
D20V3, multiclass
        clus
vv       DEL PEAK  8(3P11.1) MUTATED DEL PEAK  8(3P11.1) WILD-TYPE
  CLUS_1                         112                            50
  CLUS_2                         108                           115
  CLUS_3                          14                           115
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P11.1) MUTATED       50     51     33
  DEL PEAK  8(3P11.1) WILD-TYPE     50     63     43
D20V4, multiclass
        clus
vv       DEL PEAK  8(3P11.1) MUTATED DEL PEAK  8(3P11.1) WILD-TYPE
  CLUS_1                          50                            50
  CLUS_2                          51                            63
  CLUS_3                          33                            43
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  8(3P11.1) MUTATED       46     37     42     34     21     25
  DEL PEAK  8(3P11.1) WILD-TYPE     54     51     42     41     22     32
D20V5, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P11.1) MUTATED       92     71     42
  DEL PEAK  8(3P11.1) WILD-TYPE     94     81     67
D20V6, multiclass
        clus
vv       DEL PEAK  8(3P11.1) MUTATED DEL PEAK  8(3P11.1) WILD-TYPE
  CLUS_1                          92                            94
  CLUS_2                          71                            81
  CLUS_3                          42                            67
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P11.1) MUTATED       96     40     97
  DEL PEAK  8(3P11.1) WILD-TYPE    119     68     90
D20V7, multiclass
        clus
vv       DEL PEAK  8(3P11.1) MUTATED DEL PEAK  8(3P11.1) WILD-TYPE
  CLUS_1                          96                           119
  CLUS_2                          40                            68
  CLUS_3                          97                            90
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P11.1) MUTATED      102    108     23
  DEL PEAK  8(3P11.1) WILD-TYPE    124     97     56
D20V8, multiclass
        clus
vv       DEL PEAK  8(3P11.1) MUTATED DEL PEAK  8(3P11.1) WILD-TYPE
  CLUS_1                         102                           124
  CLUS_2                         108                            97
  CLUS_3                          23                            56
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P11.1) MUTATED       45     98     84
  DEL PEAK  8(3P11.1) WILD-TYPE     65    111     93
D20V9, multiclass
        clus
vv       DEL PEAK  8(3P11.1) MUTATED DEL PEAK  8(3P11.1) WILD-TYPE
  CLUS_1                          45                            65
  CLUS_2                          98                           111
  CLUS_3                          84                            93
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P11.1) MUTATED       14    127     86
  DEL PEAK  8(3P11.1) WILD-TYPE     29    142     98
D20V10, multiclass
        clus
vv       DEL PEAK  8(3P11.1) MUTATED DEL PEAK  8(3P11.1) WILD-TYPE
  CLUS_1                          14                            29
  CLUS_2                         127                           142
  CLUS_3                          86                            98
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P11.1) MUTATED       18     41     50
  DEL PEAK  8(3P11.1) WILD-TYPE     32     58     37
D20V11, multiclass
        clus
vv       DEL PEAK  8(3P11.1) MUTATED DEL PEAK  8(3P11.1) WILD-TYPE
  CLUS_1                          18                            32
  CLUS_2                          41                            58
  CLUS_3                          50                            37
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(3P11.1) MUTATED        0     21     44      6     38
  DEL PEAK  8(3P11.1) WILD-TYPE     11     33     35      5     43
D20V12, multiclass

Clustering(21) Variable = DEL PEAK  9(3Q11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.2) MUTATED       11      8      1
  DEL PEAK  9(3Q11.2) WILD-TYPE     22     16     12
D21V1, multiclass
        clus
vv       DEL PEAK  9(3Q11.2) MUTATED DEL PEAK  9(3Q11.2) WILD-TYPE
  CLUS_1                          11                            22
  CLUS_2                           8                            16
  CLUS_3                           1                            12
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.2) MUTATED        1     10      9
  DEL PEAK  9(3Q11.2) WILD-TYPE     13     22     15
D21V2, multiclass
        clus
vv       DEL PEAK  9(3Q11.2) MUTATED DEL PEAK  9(3Q11.2) WILD-TYPE
  CLUS_1                           1                            13
  CLUS_2                          10                            22
  CLUS_3                           9                            15
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.2) MUTATED       74     73     11
  DEL PEAK  9(3Q11.2) WILD-TYPE     88    150    118
D21V3, multiclass
        clus
vv       DEL PEAK  9(3Q11.2) MUTATED DEL PEAK  9(3Q11.2) WILD-TYPE
  CLUS_1                          74                            88
  CLUS_2                          73                           150
  CLUS_3                          11                           118
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.2) MUTATED       34     39     19
  DEL PEAK  9(3Q11.2) WILD-TYPE     66     75     57
D21V4, multiclass
        clus
vv       DEL PEAK  9(3Q11.2) MUTATED DEL PEAK  9(3Q11.2) WILD-TYPE
  CLUS_1                          34                            66
  CLUS_2                          39                            75
  CLUS_3                          19                            57
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  9(3Q11.2) MUTATED       31     24     31     24     13     18
  DEL PEAK  9(3Q11.2) WILD-TYPE     69     64     53     51     30     39
D21V5, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.2) MUTATED       64     51     26
  DEL PEAK  9(3Q11.2) WILD-TYPE    122    101     83
D21V6, multiclass
        clus
vv       DEL PEAK  9(3Q11.2) MUTATED DEL PEAK  9(3Q11.2) WILD-TYPE
  CLUS_1                          64                           122
  CLUS_2                          51                           101
  CLUS_3                          26                            83
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.2) MUTATED       64     31     63
  DEL PEAK  9(3Q11.2) WILD-TYPE    151     77    124
D21V7, multiclass
        clus
vv       DEL PEAK  9(3Q11.2) MUTATED DEL PEAK  9(3Q11.2) WILD-TYPE
  CLUS_1                          64                           151
  CLUS_2                          31                            77
  CLUS_3                          63                           124
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.2) MUTATED       68     74     16
  DEL PEAK  9(3Q11.2) WILD-TYPE    158    131     63
D21V8, multiclass
        clus
vv       DEL PEAK  9(3Q11.2) MUTATED DEL PEAK  9(3Q11.2) WILD-TYPE
  CLUS_1                          68                           158
  CLUS_2                          74                           131
  CLUS_3                          16                            63
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.2) MUTATED       29     69     55
  DEL PEAK  9(3Q11.2) WILD-TYPE     81    140    122
D21V9, multiclass
        clus
vv       DEL PEAK  9(3Q11.2) MUTATED DEL PEAK  9(3Q11.2) WILD-TYPE
  CLUS_1                          29                            81
  CLUS_2                          69                           140
  CLUS_3                          55                           122
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.2) MUTATED        8     87     58
  DEL PEAK  9(3Q11.2) WILD-TYPE     35    182    126
D21V10, multiclass
        clus
vv       DEL PEAK  9(3Q11.2) MUTATED DEL PEAK  9(3Q11.2) WILD-TYPE
  CLUS_1                           8                            35
  CLUS_2                          87                           182
  CLUS_3                          58                           126
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.2) MUTATED       12     26     31
  DEL PEAK  9(3Q11.2) WILD-TYPE     38     73     56
D21V11, multiclass
        clus
vv       DEL PEAK  9(3Q11.2) MUTATED DEL PEAK  9(3Q11.2) WILD-TYPE
  CLUS_1                          12                            38
  CLUS_2                          26                            73
  CLUS_3                          31                            56
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(3Q11.2) MUTATED        0     13     30      3     23
  DEL PEAK  9(3Q11.2) WILD-TYPE     11     41     49      8     58
D21V12, multiclass

Clustering(22) Variable = DEL PEAK 10(4Q34.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q34.3) MUTATED        6      5      0
  DEL PEAK 10(4Q34.3) WILD-TYPE     27     19     13
D22V1, multiclass
        clus
vv       DEL PEAK 10(4Q34.3) MUTATED DEL PEAK 10(4Q34.3) WILD-TYPE
  CLUS_1                           6                            27
  CLUS_2                           5                            19
  CLUS_3                           0                            13
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q34.3) MUTATED        0      6      5
  DEL PEAK 10(4Q34.3) WILD-TYPE     14     26     19
D22V2, multiclass
        clus
vv       DEL PEAK 10(4Q34.3) MUTATED DEL PEAK 10(4Q34.3) WILD-TYPE
  CLUS_1                           0                            14
  CLUS_2                           6                            26
  CLUS_3                           5                            19
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q34.3) MUTATED       49     11     18
  DEL PEAK 10(4Q34.3) WILD-TYPE    113    212    111
D22V3, multiclass
        clus
vv       DEL PEAK 10(4Q34.3) MUTATED DEL PEAK 10(4Q34.3) WILD-TYPE
  CLUS_1                          49                           113
  CLUS_2                          11                           212
  CLUS_3                          18                           111
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q34.3) MUTATED       31     10     12
  DEL PEAK 10(4Q34.3) WILD-TYPE     69    104     64
D22V4, multiclass
        clus
vv       DEL PEAK 10(4Q34.3) MUTATED DEL PEAK 10(4Q34.3) WILD-TYPE
  CLUS_1                          31                            69
  CLUS_2                          10                           104
  CLUS_3                          12                            64
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 10(4Q34.3) MUTATED       15     11     14      9      5     20
  DEL PEAK 10(4Q34.3) WILD-TYPE     85     77     70     66     38     37
D22V5, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q34.3) MUTATED       22     29     23
  DEL PEAK 10(4Q34.3) WILD-TYPE    164    123     86
D22V6, multiclass
        clus
vv       DEL PEAK 10(4Q34.3) MUTATED DEL PEAK 10(4Q34.3) WILD-TYPE
  CLUS_1                          22                           164
  CLUS_2                          29                           123
  CLUS_3                          23                            86
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q34.3) MUTATED       26      8     44
  DEL PEAK 10(4Q34.3) WILD-TYPE    189    100    143
D22V7, multiclass
        clus
vv       DEL PEAK 10(4Q34.3) MUTATED DEL PEAK 10(4Q34.3) WILD-TYPE
  CLUS_1                          26                           189
  CLUS_2                           8                           100
  CLUS_3                          44                           143
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q34.3) MUTATED       27     49      2
  DEL PEAK 10(4Q34.3) WILD-TYPE    199    156     77
D22V8, multiclass
        clus
vv       DEL PEAK 10(4Q34.3) MUTATED DEL PEAK 10(4Q34.3) WILD-TYPE
  CLUS_1                          27                           199
  CLUS_2                          49                           156
  CLUS_3                           2                            77
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q34.3) MUTATED       18     27     32
  DEL PEAK 10(4Q34.3) WILD-TYPE     92    182    145
D22V9, multiclass
        clus
vv       DEL PEAK 10(4Q34.3) MUTATED DEL PEAK 10(4Q34.3) WILD-TYPE
  CLUS_1                          18                            92
  CLUS_2                          27                           182
  CLUS_3                          32                           145
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q34.3) MUTATED        4     35     38
  DEL PEAK 10(4Q34.3) WILD-TYPE     39    234    146
D22V10, multiclass
        clus
vv       DEL PEAK 10(4Q34.3) MUTATED DEL PEAK 10(4Q34.3) WILD-TYPE
  CLUS_1                           4                            39
  CLUS_2                          35                           234
  CLUS_3                          38                           146
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q34.3) MUTATED        8      9     22
  DEL PEAK 10(4Q34.3) WILD-TYPE     42     90     65
D22V11, multiclass
        clus
vv       DEL PEAK 10(4Q34.3) MUTATED DEL PEAK 10(4Q34.3) WILD-TYPE
  CLUS_1                           8                            42
  CLUS_2                           9                            90
  CLUS_3                          22                            65
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(4Q34.3) MUTATED        0     12     19      0      8
  DEL PEAK 10(4Q34.3) WILD-TYPE     11     42     60     11     73
D22V12, multiclass

Clustering(23) Variable = DEL PEAK 11(6Q26) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(6Q26) MUTATED        7     12      8
  DEL PEAK 11(6Q26) WILD-TYPE     26     12      5
D23V1, multiclass
        clus
vv       DEL PEAK 11(6Q26) MUTATED DEL PEAK 11(6Q26) WILD-TYPE
  CLUS_1                         7                          26
  CLUS_2                        12                          12
  CLUS_3                         8                           5
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(6Q26) MUTATED        8      6     13
  DEL PEAK 11(6Q26) WILD-TYPE      6     26     11
D23V2, multiclass
        clus
vv       DEL PEAK 11(6Q26) MUTATED DEL PEAK 11(6Q26) WILD-TYPE
  CLUS_1                         8                           6
  CLUS_2                         6                          26
  CLUS_3                        13                          11
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(6Q26) MUTATED       88     30     30
  DEL PEAK 11(6Q26) WILD-TYPE     74    193     99
D23V3, multiclass
        clus
vv       DEL PEAK 11(6Q26) MUTATED DEL PEAK 11(6Q26) WILD-TYPE
  CLUS_1                        88                          74
  CLUS_2                        30                         193
  CLUS_3                        30                          99
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(6Q26) MUTATED       34     25     18
  DEL PEAK 11(6Q26) WILD-TYPE     66     89     58
D23V4, multiclass
        clus
vv       DEL PEAK 11(6Q26) MUTATED DEL PEAK 11(6Q26) WILD-TYPE
  CLUS_1                        34                          66
  CLUS_2                        25                          89
  CLUS_3                        18                          58
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 11(6Q26) MUTATED       33     10     29     22      8     28
  DEL PEAK 11(6Q26) WILD-TYPE     67     78     55     53     35     29
D23V5, multiclass
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(6Q26) MUTATED       39     48     43
  DEL PEAK 11(6Q26) WILD-TYPE    147    104     66
D23V6, multiclass
        clus
vv       DEL PEAK 11(6Q26) MUTATED DEL PEAK 11(6Q26) WILD-TYPE
  CLUS_1                        39                         147
  CLUS_2                        48                         104
  CLUS_3                        43                          66
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(6Q26) MUTATED       52     21     72
  DEL PEAK 11(6Q26) WILD-TYPE    163     87    115
D23V7, multiclass
        clus
vv       DEL PEAK 11(6Q26) MUTATED DEL PEAK 11(6Q26) WILD-TYPE
  CLUS_1                        52                         163
  CLUS_2                        21                          87
  CLUS_3                        72                         115
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(6Q26) MUTATED       54     72     19
  DEL PEAK 11(6Q26) WILD-TYPE    172    133     60
D23V8, multiclass
        clus
vv       DEL PEAK 11(6Q26) MUTATED DEL PEAK 11(6Q26) WILD-TYPE
  CLUS_1                        54                         172
  CLUS_2                        72                         133
  CLUS_3                        19                          60
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(6Q26) MUTATED       22     45     77
  DEL PEAK 11(6Q26) WILD-TYPE     88    164    100
D23V9, multiclass
        clus
vv       DEL PEAK 11(6Q26) MUTATED DEL PEAK 11(6Q26) WILD-TYPE
  CLUS_1                        22                          88
  CLUS_2                        45                         164
  CLUS_3                        77                         100
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(6Q26) MUTATED       19     69     56
  DEL PEAK 11(6Q26) WILD-TYPE     24    200    128
D23V10, multiclass
        clus
vv       DEL PEAK 11(6Q26) MUTATED DEL PEAK 11(6Q26) WILD-TYPE
  CLUS_1                        19                          24
  CLUS_2                        69                         200
  CLUS_3                        56                         128
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(6Q26) MUTATED       10     18     39
  DEL PEAK 11(6Q26) WILD-TYPE     40     81     48
D23V11, multiclass
        clus
vv       DEL PEAK 11(6Q26) MUTATED DEL PEAK 11(6Q26) WILD-TYPE
  CLUS_1                        10                          40
  CLUS_2                        18                          81
  CLUS_3                        39                          48
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(6Q26) MUTATED        4     11     32      3     17
  DEL PEAK 11(6Q26) WILD-TYPE      7     43     47      8     64
D23V12, multiclass

Clustering(24) Variable = DEL PEAK 12(6Q26) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(6Q26) MUTATED        7     12      8
  DEL PEAK 12(6Q26) WILD-TYPE     26     12      5
D24V1, multiclass
        clus
vv       DEL PEAK 12(6Q26) MUTATED DEL PEAK 12(6Q26) WILD-TYPE
  CLUS_1                         7                          26
  CLUS_2                        12                          12
  CLUS_3                         8                           5
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(6Q26) MUTATED        8      6     13
  DEL PEAK 12(6Q26) WILD-TYPE      6     26     11
D24V2, multiclass
        clus
vv       DEL PEAK 12(6Q26) MUTATED DEL PEAK 12(6Q26) WILD-TYPE
  CLUS_1                         8                           6
  CLUS_2                         6                          26
  CLUS_3                        13                          11
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(6Q26) MUTATED       88     30     30
  DEL PEAK 12(6Q26) WILD-TYPE     74    193     99
D24V3, multiclass
        clus
vv       DEL PEAK 12(6Q26) MUTATED DEL PEAK 12(6Q26) WILD-TYPE
  CLUS_1                        88                          74
  CLUS_2                        30                         193
  CLUS_3                        30                          99
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(6Q26) MUTATED       34     25     18
  DEL PEAK 12(6Q26) WILD-TYPE     66     89     58
D24V4, multiclass
        clus
vv       DEL PEAK 12(6Q26) MUTATED DEL PEAK 12(6Q26) WILD-TYPE
  CLUS_1                        34                          66
  CLUS_2                        25                          89
  CLUS_3                        18                          58
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 12(6Q26) MUTATED       32     10     29     22      8     29
  DEL PEAK 12(6Q26) WILD-TYPE     68     78     55     53     35     28
D24V5, multiclass
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(6Q26) MUTATED       39     49     42
  DEL PEAK 12(6Q26) WILD-TYPE    147    103     67
D24V6, multiclass
        clus
vv       DEL PEAK 12(6Q26) MUTATED DEL PEAK 12(6Q26) WILD-TYPE
  CLUS_1                        39                         147
  CLUS_2                        49                         103
  CLUS_3                        42                          67
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(6Q26) MUTATED       52     20     73
  DEL PEAK 12(6Q26) WILD-TYPE    163     88    114
D24V7, multiclass
        clus
vv       DEL PEAK 12(6Q26) MUTATED DEL PEAK 12(6Q26) WILD-TYPE
  CLUS_1                        52                         163
  CLUS_2                        20                          88
  CLUS_3                        73                         114
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(6Q26) MUTATED       54     72     19
  DEL PEAK 12(6Q26) WILD-TYPE    172    133     60
D24V8, multiclass
        clus
vv       DEL PEAK 12(6Q26) MUTATED DEL PEAK 12(6Q26) WILD-TYPE
  CLUS_1                        54                         172
  CLUS_2                        72                         133
  CLUS_3                        19                          60
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(6Q26) MUTATED       21     45     78
  DEL PEAK 12(6Q26) WILD-TYPE     89    164     99
D24V9, multiclass
        clus
vv       DEL PEAK 12(6Q26) MUTATED DEL PEAK 12(6Q26) WILD-TYPE
  CLUS_1                        21                          89
  CLUS_2                        45                         164
  CLUS_3                        78                          99
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(6Q26) MUTATED       18     70     56
  DEL PEAK 12(6Q26) WILD-TYPE     25    199    128
D24V10, multiclass
        clus
vv       DEL PEAK 12(6Q26) MUTATED DEL PEAK 12(6Q26) WILD-TYPE
  CLUS_1                        18                          25
  CLUS_2                        70                         199
  CLUS_3                        56                         128
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(6Q26) MUTATED        9     18     40
  DEL PEAK 12(6Q26) WILD-TYPE     41     81     47
D24V11, multiclass
        clus
vv       DEL PEAK 12(6Q26) MUTATED DEL PEAK 12(6Q26) WILD-TYPE
  CLUS_1                         9                          41
  CLUS_2                        18                          81
  CLUS_3                        40                          47
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(6Q26) MUTATED        4     11     32      3     17
  DEL PEAK 12(6Q26) WILD-TYPE      7     43     47      8     64
D24V12, multiclass

Clustering(25) Variable = DEL PEAK 13(8P23.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(8P23.2) MUTATED        6      7      4
  DEL PEAK 13(8P23.2) WILD-TYPE     27     17      9
D25V1, multiclass
        clus
vv       DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE
  CLUS_1                           6                            27
  CLUS_2                           7                            17
  CLUS_3                           4                             9
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(8P23.2) MUTATED        4      6      7
  DEL PEAK 13(8P23.2) WILD-TYPE     10     26     17
D25V2, multiclass
        clus
vv       DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE
  CLUS_1                           4                            10
  CLUS_2                           6                            26
  CLUS_3                           7                            17
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(8P23.2) MUTATED       73     43     37
  DEL PEAK 13(8P23.2) WILD-TYPE     89    180     92
D25V3, multiclass
        clus
vv       DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE
  CLUS_1                          73                            89
  CLUS_2                          43                           180
  CLUS_3                          37                            92
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(8P23.2) MUTATED       37     25     21
  DEL PEAK 13(8P23.2) WILD-TYPE     63     89     55
D25V4, multiclass
        clus
vv       DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE
  CLUS_1                          37                            63
  CLUS_2                          25                            89
  CLUS_3                          21                            55
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 13(8P23.2) MUTATED       22     28     27     20      8     28
  DEL PEAK 13(8P23.2) WILD-TYPE     78     60     57     55     35     29
D25V5, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(8P23.2) MUTATED       46     49     38
  DEL PEAK 13(8P23.2) WILD-TYPE    140    103     71
D25V6, multiclass
        clus
vv       DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE
  CLUS_1                          46                           140
  CLUS_2                          49                           103
  CLUS_3                          38                            71
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(8P23.2) MUTATED       56     22     73
  DEL PEAK 13(8P23.2) WILD-TYPE    159     86    114
D25V7, multiclass
        clus
vv       DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE
  CLUS_1                          56                           159
  CLUS_2                          22                            86
  CLUS_3                          73                           114
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(8P23.2) MUTATED       57     77     17
  DEL PEAK 13(8P23.2) WILD-TYPE    169    128     62
D25V8, multiclass
        clus
vv       DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE
  CLUS_1                          57                           169
  CLUS_2                          77                           128
  CLUS_3                          17                            62
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(8P23.2) MUTATED       32     48     70
  DEL PEAK 13(8P23.2) WILD-TYPE     78    161    107
D25V9, multiclass
        clus
vv       DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE
  CLUS_1                          32                            78
  CLUS_2                          48                           161
  CLUS_3                          70                           107
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(8P23.2) MUTATED       12     66     72
  DEL PEAK 13(8P23.2) WILD-TYPE     31    203    112
D25V10, multiclass
        clus
vv       DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE
  CLUS_1                          12                            31
  CLUS_2                          66                           203
  CLUS_3                          72                           112
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(8P23.2) MUTATED       16     20     33
  DEL PEAK 13(8P23.2) WILD-TYPE     34     79     54
D25V11, multiclass
        clus
vv       DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE
  CLUS_1                          16                            34
  CLUS_2                          20                            79
  CLUS_3                          33                            54
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(8P23.2) MUTATED        3     19     27      5     15
  DEL PEAK 13(8P23.2) WILD-TYPE      8     35     52      6     66
D25V12, multiclass

Clustering(26) Variable = DEL PEAK 14(9P23) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(9P23) MUTATED        5     12      1
  DEL PEAK 14(9P23) WILD-TYPE     28     12     12
D26V1, multiclass
        clus
vv       DEL PEAK 14(9P23) MUTATED DEL PEAK 14(9P23) WILD-TYPE
  CLUS_1                         5                          28
  CLUS_2                        12                          12
  CLUS_3                         1                          12
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(9P23) MUTATED        1      4     13
  DEL PEAK 14(9P23) WILD-TYPE     13     28     11
D26V2, multiclass
        clus
vv       DEL PEAK 14(9P23) MUTATED DEL PEAK 14(9P23) WILD-TYPE
  CLUS_1                         1                          13
  CLUS_2                         4                          28
  CLUS_3                        13                          11
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(9P23) MUTATED      111      4     34
  DEL PEAK 14(9P23) WILD-TYPE     51    219     95
D26V3, multiclass
        clus
vv       DEL PEAK 14(9P23) MUTATED DEL PEAK 14(9P23) WILD-TYPE
  CLUS_1                       111                          51
  CLUS_2                         4                         219
  CLUS_3                        34                          95
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(9P23) MUTATED       61      5     25
  DEL PEAK 14(9P23) WILD-TYPE     39    109     51
D26V4, multiclass
        clus
vv       DEL PEAK 14(9P23) MUTATED DEL PEAK 14(9P23) WILD-TYPE
  CLUS_1                        61                          39
  CLUS_2                         5                         109
  CLUS_3                        25                          51
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 14(9P23) MUTATED       17     23     33     18     10     35
  DEL PEAK 14(9P23) WILD-TYPE     83     65     51     57     33     22
D26V5, multiclass
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(9P23) MUTATED       40     53     43
  DEL PEAK 14(9P23) WILD-TYPE    146     99     66
D26V6, multiclass
        clus
vv       DEL PEAK 14(9P23) MUTATED DEL PEAK 14(9P23) WILD-TYPE
  CLUS_1                        40                         146
  CLUS_2                        53                          99
  CLUS_3                        43                          66
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(9P23) MUTATED       25     16    106
  DEL PEAK 14(9P23) WILD-TYPE    190     92     81
D26V7, multiclass
        clus
vv       DEL PEAK 14(9P23) MUTATED DEL PEAK 14(9P23) WILD-TYPE
  CLUS_1                        25                         190
  CLUS_2                        16                          92
  CLUS_3                       106                          81
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(9P23) MUTATED       24    113     10
  DEL PEAK 14(9P23) WILD-TYPE    202     92     69
D26V8, multiclass
        clus
vv       DEL PEAK 14(9P23) MUTATED DEL PEAK 14(9P23) WILD-TYPE
  CLUS_1                        24                         202
  CLUS_2                       113                          92
  CLUS_3                        10                          69
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(9P23) MUTATED       26     25     93
  DEL PEAK 14(9P23) WILD-TYPE     84    184     84
D26V9, multiclass
        clus
vv       DEL PEAK 14(9P23) MUTATED DEL PEAK 14(9P23) WILD-TYPE
  CLUS_1                        26                          84
  CLUS_2                        25                         184
  CLUS_3                        93                          84
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(9P23) MUTATED       15     56     73
  DEL PEAK 14(9P23) WILD-TYPE     28    213    111
D26V10, multiclass
        clus
vv       DEL PEAK 14(9P23) MUTATED DEL PEAK 14(9P23) WILD-TYPE
  CLUS_1                        15                          28
  CLUS_2                        56                         213
  CLUS_3                        73                         111
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(9P23) MUTATED       14      8     49
  DEL PEAK 14(9P23) WILD-TYPE     36     91     38
D26V11, multiclass
        clus
vv       DEL PEAK 14(9P23) MUTATED DEL PEAK 14(9P23) WILD-TYPE
  CLUS_1                        14                          36
  CLUS_2                         8                          91
  CLUS_3                        49                          38
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(9P23) MUTATED        3     18     36      0     14
  DEL PEAK 14(9P23) WILD-TYPE      8     36     43     11     67
D26V12, multiclass

Clustering(27) Variable = DEL PEAK 15(9P21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(9P21.3) MUTATED        5     13      1
  DEL PEAK 15(9P21.3) WILD-TYPE     28     11     12
D27V1, multiclass
        clus
vv       DEL PEAK 15(9P21.3) MUTATED DEL PEAK 15(9P21.3) WILD-TYPE
  CLUS_1                           5                            28
  CLUS_2                          13                            11
  CLUS_3                           1                            12
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(9P21.3) MUTATED        1      4     14
  DEL PEAK 15(9P21.3) WILD-TYPE     13     28     10
D27V2, multiclass
        clus
vv       DEL PEAK 15(9P21.3) MUTATED DEL PEAK 15(9P21.3) WILD-TYPE
  CLUS_1                           1                            13
  CLUS_2                           4                            28
  CLUS_3                          14                            10
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(9P21.3) MUTATED      113      7     36
  DEL PEAK 15(9P21.3) WILD-TYPE     49    216     93
D27V3, multiclass
        clus
vv       DEL PEAK 15(9P21.3) MUTATED DEL PEAK 15(9P21.3) WILD-TYPE
  CLUS_1                         113                            49
  CLUS_2                           7                           216
  CLUS_3                          36                            93
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(9P21.3) MUTATED       61      5     28
  DEL PEAK 15(9P21.3) WILD-TYPE     39    109     48
D27V4, multiclass
        clus
vv       DEL PEAK 15(9P21.3) MUTATED DEL PEAK 15(9P21.3) WILD-TYPE
  CLUS_1                          61                            39
  CLUS_2                           5                           109
  CLUS_3                          28                            48
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 15(9P21.3) MUTATED       18     26     33     19     10     37
  DEL PEAK 15(9P21.3) WILD-TYPE     82     62     51     56     33     20
D27V5, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(9P21.3) MUTATED       42     53     48
  DEL PEAK 15(9P21.3) WILD-TYPE    144     99     61
D27V6, multiclass
        clus
vv       DEL PEAK 15(9P21.3) MUTATED DEL PEAK 15(9P21.3) WILD-TYPE
  CLUS_1                          42                           144
  CLUS_2                          53                            99
  CLUS_3                          48                            61
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(9P21.3) MUTATED       27     18    109
  DEL PEAK 15(9P21.3) WILD-TYPE    188     90     78
D27V7, multiclass
        clus
vv       DEL PEAK 15(9P21.3) MUTATED DEL PEAK 15(9P21.3) WILD-TYPE
  CLUS_1                          27                           188
  CLUS_2                          18                            90
  CLUS_3                         109                            78
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(9P21.3) MUTATED       24    120     10
  DEL PEAK 15(9P21.3) WILD-TYPE    202     85     69
D27V8, multiclass
        clus
vv       DEL PEAK 15(9P21.3) MUTATED DEL PEAK 15(9P21.3) WILD-TYPE
  CLUS_1                          24                           202
  CLUS_2                         120                            85
  CLUS_3                          10                            69
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(9P21.3) MUTATED       29     26     95
  DEL PEAK 15(9P21.3) WILD-TYPE     81    183     82
D27V9, multiclass
        clus
vv       DEL PEAK 15(9P21.3) MUTATED DEL PEAK 15(9P21.3) WILD-TYPE
  CLUS_1                          29                            81
  CLUS_2                          26                           183
  CLUS_3                          95                            82
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(9P21.3) MUTATED       16     55     79
  DEL PEAK 15(9P21.3) WILD-TYPE     27    214    105
D27V10, multiclass
        clus
vv       DEL PEAK 15(9P21.3) MUTATED DEL PEAK 15(9P21.3) WILD-TYPE
  CLUS_1                          16                            27
  CLUS_2                          55                           214
  CLUS_3                          79                           105
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(9P21.3) MUTATED       15      8     48
  DEL PEAK 15(9P21.3) WILD-TYPE     35     91     39
D27V11, multiclass
        clus
vv       DEL PEAK 15(9P21.3) MUTATED DEL PEAK 15(9P21.3) WILD-TYPE
  CLUS_1                          15                            35
  CLUS_2                           8                            91
  CLUS_3                          48                            39
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(9P21.3) MUTATED        3     19     35      0     14
  DEL PEAK 15(9P21.3) WILD-TYPE      8     35     44     11     67
D27V12, multiclass

Clustering(28) Variable = DEL PEAK 16(10Q23.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(10Q23.31) MUTATED        5      6      4
  DEL PEAK 16(10Q23.31) WILD-TYPE     28     18      9
D28V1, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                             5                              28
  CLUS_2                             6                              18
  CLUS_3                             4                               9
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(10Q23.31) MUTATED        4      5      6
  DEL PEAK 16(10Q23.31) WILD-TYPE     10     27     18
D28V2, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                             4                              10
  CLUS_2                             5                              27
  CLUS_3                             6                              18
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(10Q23.31) MUTATED       48     14     32
  DEL PEAK 16(10Q23.31) WILD-TYPE    114    209     97
D28V3, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                            48                             114
  CLUS_2                            14                             209
  CLUS_3                            32                              97
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(10Q23.31) MUTATED       31     14     11
  DEL PEAK 16(10Q23.31) WILD-TYPE     69    100     65
D28V4, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                            31                              69
  CLUS_2                            14                             100
  CLUS_3                            11                              65
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 16(10Q23.31) MUTATED       17     17     14     15      8     12
  DEL PEAK 16(10Q23.31) WILD-TYPE     83     71     70     60     35     45
D28V5, multiclass
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(10Q23.31) MUTATED       29     26     28
  DEL PEAK 16(10Q23.31) WILD-TYPE    157    126     81
D28V6, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                            29                             157
  CLUS_2                            26                             126
  CLUS_3                            28                              81
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(10Q23.31) MUTATED       29     22     42
  DEL PEAK 16(10Q23.31) WILD-TYPE    186     86    145
D28V7, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                            29                             186
  CLUS_2                            22                              86
  CLUS_3                            42                             145
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(10Q23.31) MUTATED       32     46     15
  DEL PEAK 16(10Q23.31) WILD-TYPE    194    159     64
D28V8, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                            32                             194
  CLUS_2                            46                             159
  CLUS_3                            15                              64
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(10Q23.31) MUTATED       21     29     42
  DEL PEAK 16(10Q23.31) WILD-TYPE     89    180    135
D28V9, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                            21                              89
  CLUS_2                            29                             180
  CLUS_3                            42                             135
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(10Q23.31) MUTATED       11     43     38
  DEL PEAK 16(10Q23.31) WILD-TYPE     32    226    146
D28V10, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                            11                              32
  CLUS_2                            43                             226
  CLUS_3                            38                             146
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(10Q23.31) MUTATED        8     11     20
  DEL PEAK 16(10Q23.31) WILD-TYPE     42     88     67
D28V11, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                             8                              42
  CLUS_2                            11                              88
  CLUS_3                            20                              67
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(10Q23.31) MUTATED        5      6     17      0     11
  DEL PEAK 16(10Q23.31) WILD-TYPE      6     48     62     11     70
D28V12, multiclass

Clustering(29) Variable = DEL PEAK 17(13Q14.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(13Q14.2) MUTATED        1      7      3
  DEL PEAK 17(13Q14.2) WILD-TYPE     32     17     10
D29V1, multiclass
        clus
vv       DEL PEAK 17(13Q14.2) MUTATED DEL PEAK 17(13Q14.2) WILD-TYPE
  CLUS_1                            1                             32
  CLUS_2                            7                             17
  CLUS_3                            3                             10
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(13Q14.2) MUTATED        3      1      7
  DEL PEAK 17(13Q14.2) WILD-TYPE     11     31     17
D29V2, multiclass
        clus
vv       DEL PEAK 17(13Q14.2) MUTATED DEL PEAK 17(13Q14.2) WILD-TYPE
  CLUS_1                            3                             11
  CLUS_2                            1                             31
  CLUS_3                            7                             17
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(13Q14.2) MUTATED       42     10     28
  DEL PEAK 17(13Q14.2) WILD-TYPE    120    213    101
D29V3, multiclass
        clus
vv       DEL PEAK 17(13Q14.2) MUTATED DEL PEAK 17(13Q14.2) WILD-TYPE
  CLUS_1                           42                            120
  CLUS_2                           10                            213
  CLUS_3                           28                            101
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(13Q14.2) MUTATED       21      8     20
  DEL PEAK 17(13Q14.2) WILD-TYPE     79    106     56
D29V4, multiclass
        clus
vv       DEL PEAK 17(13Q14.2) MUTATED DEL PEAK 17(13Q14.2) WILD-TYPE
  CLUS_1                           21                             79
  CLUS_2                            8                            106
  CLUS_3                           20                             56
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 17(13Q14.2) MUTATED        3     12     16     13      6     22
  DEL PEAK 17(13Q14.2) WILD-TYPE     97     76     68     62     37     35
D29V5, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(13Q14.2) MUTATED       21     25     26
  DEL PEAK 17(13Q14.2) WILD-TYPE    165    127     83
D29V6, multiclass
        clus
vv       DEL PEAK 17(13Q14.2) MUTATED DEL PEAK 17(13Q14.2) WILD-TYPE
  CLUS_1                           21                            165
  CLUS_2                           25                            127
  CLUS_3                           26                             83
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(13Q14.2) MUTATED       19     13     48
  DEL PEAK 17(13Q14.2) WILD-TYPE    196     95    139
D29V7, multiclass
        clus
vv       DEL PEAK 17(13Q14.2) MUTATED DEL PEAK 17(13Q14.2) WILD-TYPE
  CLUS_1                           19                            196
  CLUS_2                           13                             95
  CLUS_3                           48                            139
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(13Q14.2) MUTATED       18     52     10
  DEL PEAK 17(13Q14.2) WILD-TYPE    208    153     69
D29V8, multiclass
        clus
vv       DEL PEAK 17(13Q14.2) MUTATED DEL PEAK 17(13Q14.2) WILD-TYPE
  CLUS_1                           18                            208
  CLUS_2                           52                            153
  CLUS_3                           10                             69
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(13Q14.2) MUTATED       14     17     47
  DEL PEAK 17(13Q14.2) WILD-TYPE     96    192    130
D29V9, multiclass
        clus
vv       DEL PEAK 17(13Q14.2) MUTATED DEL PEAK 17(13Q14.2) WILD-TYPE
  CLUS_1                           14                             96
  CLUS_2                           17                            192
  CLUS_3                           47                            130
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(13Q14.2) MUTATED       14     29     35
  DEL PEAK 17(13Q14.2) WILD-TYPE     29    240    149
D29V10, multiclass
        clus
vv       DEL PEAK 17(13Q14.2) MUTATED DEL PEAK 17(13Q14.2) WILD-TYPE
  CLUS_1                           14                             29
  CLUS_2                           29                            240
  CLUS_3                           35                            149
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(13Q14.2) MUTATED        6     11     22
  DEL PEAK 17(13Q14.2) WILD-TYPE     44     88     65
D29V11, multiclass
        clus
vv       DEL PEAK 17(13Q14.2) MUTATED DEL PEAK 17(13Q14.2) WILD-TYPE
  CLUS_1                            6                             44
  CLUS_2                           11                             88
  CLUS_3                           22                             65
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(13Q14.2) MUTATED        3      7     22      1      6
  DEL PEAK 17(13Q14.2) WILD-TYPE      8     47     57     10     75
D29V12, multiclass

Clustering(30) Variable = DEL PEAK 18(14Q31.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(14Q31.1) MUTATED       10     19      2
  DEL PEAK 18(14Q31.1) WILD-TYPE     23      5     11
D30V1, multiclass
        clus
vv       DEL PEAK 18(14Q31.1) MUTATED DEL PEAK 18(14Q31.1) WILD-TYPE
  CLUS_1                           10                             23
  CLUS_2                           19                              5
  CLUS_3                            2                             11
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(14Q31.1) MUTATED        3      9     19
  DEL PEAK 18(14Q31.1) WILD-TYPE     11     23      5
D30V2, multiclass
        clus
vv       DEL PEAK 18(14Q31.1) MUTATED DEL PEAK 18(14Q31.1) WILD-TYPE
  CLUS_1                            3                             11
  CLUS_2                            9                             23
  CLUS_3                           19                              5
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(14Q31.1) MUTATED      115     61     48
  DEL PEAK 18(14Q31.1) WILD-TYPE     47    162     81
D30V3, multiclass
        clus
vv       DEL PEAK 18(14Q31.1) MUTATED DEL PEAK 18(14Q31.1) WILD-TYPE
  CLUS_1                          115                             47
  CLUS_2                           61                            162
  CLUS_3                           48                             81
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(14Q31.1) MUTATED       59     29     38
  DEL PEAK 18(14Q31.1) WILD-TYPE     41     85     38
D30V4, multiclass
        clus
vv       DEL PEAK 18(14Q31.1) MUTATED DEL PEAK 18(14Q31.1) WILD-TYPE
  CLUS_1                           59                             41
  CLUS_2                           29                             85
  CLUS_3                           38                             38
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 18(14Q31.1) MUTATED       30     30     64     23     13     40
  DEL PEAK 18(14Q31.1) WILD-TYPE     70     58     20     52     30     17
D30V5, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(14Q31.1) MUTATED       57     92     51
  DEL PEAK 18(14Q31.1) WILD-TYPE    129     60     58
D30V6, multiclass
        clus
vv       DEL PEAK 18(14Q31.1) MUTATED DEL PEAK 18(14Q31.1) WILD-TYPE
  CLUS_1                           57                            129
  CLUS_2                           92                             60
  CLUS_3                           51                             58
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(14Q31.1) MUTATED       71     19    130
  DEL PEAK 18(14Q31.1) WILD-TYPE    144     89     57
D30V7, multiclass
        clus
vv       DEL PEAK 18(14Q31.1) MUTATED DEL PEAK 18(14Q31.1) WILD-TYPE
  CLUS_1                           71                            144
  CLUS_2                           19                             89
  CLUS_3                          130                             57
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(14Q31.1) MUTATED       75    132     13
  DEL PEAK 18(14Q31.1) WILD-TYPE    151     73     66
D30V8, multiclass
        clus
vv       DEL PEAK 18(14Q31.1) MUTATED DEL PEAK 18(14Q31.1) WILD-TYPE
  CLUS_1                           75                            151
  CLUS_2                          132                             73
  CLUS_3                           13                             66
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(14Q31.1) MUTATED       37     67    114
  DEL PEAK 18(14Q31.1) WILD-TYPE     73    142     63
D30V9, multiclass
        clus
vv       DEL PEAK 18(14Q31.1) MUTATED DEL PEAK 18(14Q31.1) WILD-TYPE
  CLUS_1                           37                             73
  CLUS_2                           67                            142
  CLUS_3                          114                             63
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(14Q31.1) MUTATED       26    114     78
  DEL PEAK 18(14Q31.1) WILD-TYPE     17    155    106
D30V10, multiclass
        clus
vv       DEL PEAK 18(14Q31.1) MUTATED DEL PEAK 18(14Q31.1) WILD-TYPE
  CLUS_1                           26                             17
  CLUS_2                          114                            155
  CLUS_3                           78                            106
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(14Q31.1) MUTATED       16     30     58
  DEL PEAK 18(14Q31.1) WILD-TYPE     34     69     29
D30V11, multiclass
        clus
vv       DEL PEAK 18(14Q31.1) MUTATED DEL PEAK 18(14Q31.1) WILD-TYPE
  CLUS_1                           16                             34
  CLUS_2                           30                             69
  CLUS_3                           58                             29
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(14Q31.1) MUTATED        1     22     51      3     27
  DEL PEAK 18(14Q31.1) WILD-TYPE     10     32     28      8     54
D30V12, multiclass
> q(save="no")
