
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/13/Correlate_Genomic_Events.R")
> result <- main("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/13/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-tTRUE", "-iD=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/KIRP-TP/8282841/transformed.cor.cli.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/KIRP-TP/8282700/KIRP-TP.transferedmergedcluster.txt", "-fF=", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=0.05", "-cQ=0.25", "-MF=ONLYSIG", "-oT=KIRP-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=KIRP-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/KIRP-TP/8282700/KIRP-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/KIRP-TP/8282841/transformed.cor.cli.txt"

nPatients in clinical file=198, in cluster file=197, common to both=197
[1]  28 197
[1] "AMP PEAK 1(2P23.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 1(2P23.2) MUTATED AMP PEAK 1(2P23.2) WILD-TYPE 
                          37                          160 
  AMP PEAK 1(2P23.2) MUTATED AMP PEAK 1(2P23.2) WILD-TYPE 
                          37                          160 
[1] "AMP PEAK 2(2Q32.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 2(2Q32.1) MUTATED AMP PEAK 2(2Q32.1) WILD-TYPE 
                          45                          152 
  AMP PEAK 2(2Q32.1) MUTATED AMP PEAK 2(2Q32.1) WILD-TYPE 
                          45                          152 
[1] "AMP PEAK 3(3Q22.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 3(3Q22.3) MUTATED AMP PEAK 3(3Q22.3) WILD-TYPE 
                          68                          129 
  AMP PEAK 3(3Q22.3) MUTATED AMP PEAK 3(3Q22.3) WILD-TYPE 
                          68                          129 
[1] "AMP PEAK 4(7Q22.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 4(7Q22.1) MUTATED AMP PEAK 4(7Q22.1) WILD-TYPE 
                         119                           78 
  AMP PEAK 4(7Q22.1) MUTATED AMP PEAK 4(7Q22.1) WILD-TYPE 
                         119                           78 
[1] "AMP PEAK 5(17Q25.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 5(17Q25.2) MUTATED AMP PEAK 5(17Q25.2) WILD-TYPE 
                          143                            54 
  AMP PEAK 5(17Q25.2) MUTATED AMP PEAK 5(17Q25.2) WILD-TYPE 
                          143                            54 
[1] "AMP PEAK 6(19P13.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 6(19P13.2) MUTATED AMP PEAK 6(19P13.2) WILD-TYPE 
                           21                           176 
  AMP PEAK 6(19P13.2) MUTATED AMP PEAK 6(19P13.2) WILD-TYPE 
                           21                           176 
[1] "DEL PEAK  1(1P36.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE 
                            37                            160 
  DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE 
                            37                            160 
[1] "DEL PEAK  2(2Q37.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  2(2Q37.3) MUTATED DEL PEAK  2(2Q37.3) WILD-TYPE 
                            9                           188 
  DEL PEAK  2(2Q37.3) MUTATED DEL PEAK  2(2Q37.3) WILD-TYPE 
                            9                           188 
[1] "DEL PEAK  3(3P22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  3(3P22.1) MUTATED DEL PEAK  3(3P22.1) WILD-TYPE 
                           15                           182 
  DEL PEAK  3(3P22.1) MUTATED DEL PEAK  3(3P22.1) WILD-TYPE 
                           15                           182 
[1] "DEL PEAK  4(4Q34.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  4(4Q34.3) MUTATED DEL PEAK  4(4Q34.3) WILD-TYPE 
                           21                           176 
  DEL PEAK  4(4Q34.3) MUTATED DEL PEAK  4(4Q34.3) WILD-TYPE 
                           21                           176 
[1] "DEL PEAK  5(5P14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  5(5P14.2) MUTATED DEL PEAK  5(5P14.2) WILD-TYPE 
                           10                           187 
  DEL PEAK  5(5P14.2) MUTATED DEL PEAK  5(5P14.2) WILD-TYPE 
                           10                           187 
[1] "DEL PEAK  6(5Q15) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  6(5Q15) MUTATED DEL PEAK  6(5Q15) WILD-TYPE 
                         11                         186 
  DEL PEAK  6(5Q15) MUTATED DEL PEAK  6(5Q15) WILD-TYPE 
                         11                         186 
[1] "DEL PEAK  7(5Q35.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  7(5Q35.2) MUTATED DEL PEAK  7(5Q35.2) WILD-TYPE 
                           11                           186 
  DEL PEAK  7(5Q35.2) MUTATED DEL PEAK  7(5Q35.2) WILD-TYPE 
                           11                           186 
[1] "DEL PEAK  8(6Q21) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  8(6Q21) MUTATED DEL PEAK  8(6Q21) WILD-TYPE 
                         17                         180 
  DEL PEAK  8(6Q21) MUTATED DEL PEAK  8(6Q21) WILD-TYPE 
                         17                         180 
[1] "DEL PEAK  9(6Q22.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  9(6Q22.31) MUTATED DEL PEAK  9(6Q22.31) WILD-TYPE 
                            18                            179 
  DEL PEAK  9(6Q22.31) MUTATED DEL PEAK  9(6Q22.31) WILD-TYPE 
                            18                            179 
[1] "DEL PEAK 10(9P21.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 10(9P21.3) MUTATED DEL PEAK 10(9P21.3) WILD-TYPE 
                           27                           170 
  DEL PEAK 10(9P21.3) MUTATED DEL PEAK 10(9P21.3) WILD-TYPE 
                           27                           170 
[1] "DEL PEAK 11(10P11.21) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 11(10P11.21) MUTATED DEL PEAK 11(10P11.21) WILD-TYPE 
                             12                             185 
  DEL PEAK 11(10P11.21) MUTATED DEL PEAK 11(10P11.21) WILD-TYPE 
                             12                             185 
[1] "DEL PEAK 12(11Q22.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 12(11Q22.3) MUTATED DEL PEAK 12(11Q22.3) WILD-TYPE 
                            18                            179 
  DEL PEAK 12(11Q22.3) MUTATED DEL PEAK 12(11Q22.3) WILD-TYPE 
                            18                            179 
[1] "DEL PEAK 13(11Q24.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 13(11Q24.2) MUTATED DEL PEAK 13(11Q24.2) WILD-TYPE 
                            19                            178 
  DEL PEAK 13(11Q24.2) MUTATED DEL PEAK 13(11Q24.2) WILD-TYPE 
                            19                            178 
[1] "DEL PEAK 14(14Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 14(14Q11.2) MUTATED DEL PEAK 14(14Q11.2) WILD-TYPE 
                            39                            158 
  DEL PEAK 14(14Q11.2) MUTATED DEL PEAK 14(14Q11.2) WILD-TYPE 
                            39                            158 
[1] "DEL PEAK 15(14Q32.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 15(14Q32.2) MUTATED DEL PEAK 15(14Q32.2) WILD-TYPE 
                            39                            158 
  DEL PEAK 15(14Q32.2) MUTATED DEL PEAK 15(14Q32.2) WILD-TYPE 
                            39                            158 
[1] "DEL PEAK 16(15Q15.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 16(15Q15.2) MUTATED DEL PEAK 16(15Q15.2) WILD-TYPE 
                            22                            175 
  DEL PEAK 16(15Q15.2) MUTATED DEL PEAK 16(15Q15.2) WILD-TYPE 
                            22                            175 
[1] "DEL PEAK 17(16Q24.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 17(16Q24.1) MUTATED DEL PEAK 17(16Q24.1) WILD-TYPE 
                             7                            190 
  DEL PEAK 17(16Q24.1) MUTATED DEL PEAK 17(16Q24.1) WILD-TYPE 
                             7                            190 
[1] "DEL PEAK 18(19P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 18(19P13.3) MUTATED DEL PEAK 18(19P13.3) WILD-TYPE 
                            16                            181 
  DEL PEAK 18(19P13.3) MUTATED DEL PEAK 18(19P13.3) WILD-TYPE 
                            16                            181 
[1] "DEL PEAK 19(19Q13.42) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 19(19Q13.42) MUTATED DEL PEAK 19(19Q13.42) WILD-TYPE 
                             15                             182 
  DEL PEAK 19(19Q13.42) MUTATED DEL PEAK 19(19Q13.42) WILD-TYPE 
                             15                             182 
[1] "DEL PEAK 20(21Q22.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 20(21Q22.3) MUTATED DEL PEAK 20(21Q22.3) WILD-TYPE 
                            33                            164 
  DEL PEAK 20(21Q22.3) MUTATED DEL PEAK 20(21Q22.3) WILD-TYPE 
                            33                            164 
[1] "DEL PEAK 21(XP11.22) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 21(XP11.22) MUTATED DEL PEAK 21(XP11.22) WILD-TYPE 
                            18                            179 
  DEL PEAK 21(XP11.22) MUTATED DEL PEAK 21(XP11.22) WILD-TYPE 
                            18                            179 
[1] "DEL PEAK 22(XQ28) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 22(XQ28) MUTATED DEL PEAK 22(XQ28) WILD-TYPE 
                         17                         180 
  DEL PEAK 22(XQ28) MUTATED DEL PEAK 22(XQ28) WILD-TYPE 
                         17                         180 
[1] "terrence_modification_tag"
[1] TRUE
[1] "data2feature, selection="
[1] "CN_CNMF"                     "METHLYATION_CNMF"           
[3] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
[5] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[7] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 8 rows and 197 columns.

Variable 1:'CN_CNMF':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'MRNASEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_MATURE_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
[1] "CN_CNMF"                     "METHLYATION_CNMF"           
[3] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
[5] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[7] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 197 columns, 0 survival variables, and 8 non-survival variables.
CN_CNMF, nv=5, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=5, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = AMP PEAK 1(2P23.2) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 1(2P23.2) MUTATED        2      2      6      0     27
  AMP PEAK 1(2P23.2) WILD-TYPE     69     38     31     21      1
D1V1, multiclass
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 1(2P23.2) MUTATED        3      8      4     18      1
  AMP PEAK 1(2P23.2) WILD-TYPE     35     16     29     30     37
D1V2, multiclass
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 1(2P23.2) MUTATED       11     12     13      1
  AMP PEAK 1(2P23.2) WILD-TYPE     28     55     46     31
D1V3, multiclass
        clus
vv       AMP PEAK 1(2P23.2) MUTATED AMP PEAK 1(2P23.2) WILD-TYPE
  CLUS_1                         11                           28
  CLUS_2                         12                           55
  CLUS_3                         13                           46
  CLUS_4                          1                           31
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 1(2P23.2) MUTATED       18     13      6
  AMP PEAK 1(2P23.2) WILD-TYPE     52     58     50
D1V4, multiclass
        clus
vv       AMP PEAK 1(2P23.2) MUTATED AMP PEAK 1(2P23.2) WILD-TYPE
  CLUS_1                         18                           52
  CLUS_2                         13                           58
  CLUS_3                          6                           50
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 1(2P23.2) MUTATED       10      8     19
  AMP PEAK 1(2P23.2) WILD-TYPE     55     57     48
D1V5, multiclass
        clus
vv       AMP PEAK 1(2P23.2) MUTATED AMP PEAK 1(2P23.2) WILD-TYPE
  CLUS_1                         10                           55
  CLUS_2                          8                           57
  CLUS_3                         19                           48
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 1(2P23.2) MUTATED        5     13     19
  AMP PEAK 1(2P23.2) WILD-TYPE     24     65     71
D1V6, multiclass
        clus
vv       AMP PEAK 1(2P23.2) MUTATED AMP PEAK 1(2P23.2) WILD-TYPE
  CLUS_1                          5                           24
  CLUS_2                         13                           65
  CLUS_3                         19                           71
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 1(2P23.2) MUTATED        9      7     21
  AMP PEAK 1(2P23.2) WILD-TYPE     48     64     48
D1V7, multiclass
        clus
vv       AMP PEAK 1(2P23.2) MUTATED AMP PEAK 1(2P23.2) WILD-TYPE
  CLUS_1                          9                           48
  CLUS_2                          7                           64
  CLUS_3                         21                           48
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 1(2P23.2) MUTATED       12     21      4
  AMP PEAK 1(2P23.2) WILD-TYPE     63     78     19
D1V8, multiclass
        clus
vv       AMP PEAK 1(2P23.2) MUTATED AMP PEAK 1(2P23.2) WILD-TYPE
  CLUS_1                         12                           63
  CLUS_2                         21                           78
  CLUS_3                          4                           19

Clustering(2) Variable = AMP PEAK 2(2Q32.1) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 2(2Q32.1) MUTATED        5      2      9      1     28
  AMP PEAK 2(2Q32.1) WILD-TYPE     66     38     28     20      0
D2V1, multiclass
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 2(2Q32.1) MUTATED        6      8      7     20      1
  AMP PEAK 2(2Q32.1) WILD-TYPE     32     16     26     28     37
D2V2, multiclass
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 2(2Q32.1) MUTATED       13     16     14      2
  AMP PEAK 2(2Q32.1) WILD-TYPE     26     51     45     30
D2V3, multiclass
        clus
vv       AMP PEAK 2(2Q32.1) MUTATED AMP PEAK 2(2Q32.1) WILD-TYPE
  CLUS_1                         13                           26
  CLUS_2                         16                           51
  CLUS_3                         14                           45
  CLUS_4                          2                           30
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 2(2Q32.1) MUTATED       20     19      6
  AMP PEAK 2(2Q32.1) WILD-TYPE     50     52     50
D2V4, multiclass
        clus
vv       AMP PEAK 2(2Q32.1) MUTATED AMP PEAK 2(2Q32.1) WILD-TYPE
  CLUS_1                         20                           50
  CLUS_2                         19                           52
  CLUS_3                          6                           50
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 2(2Q32.1) MUTATED       15     10     20
  AMP PEAK 2(2Q32.1) WILD-TYPE     50     55     47
D2V5, multiclass
        clus
vv       AMP PEAK 2(2Q32.1) MUTATED AMP PEAK 2(2Q32.1) WILD-TYPE
  CLUS_1                         15                           50
  CLUS_2                         10                           55
  CLUS_3                         20                           47
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 2(2Q32.1) MUTATED        7     16     22
  AMP PEAK 2(2Q32.1) WILD-TYPE     22     62     68
D2V6, multiclass
        clus
vv       AMP PEAK 2(2Q32.1) MUTATED AMP PEAK 2(2Q32.1) WILD-TYPE
  CLUS_1                          7                           22
  CLUS_2                         16                           62
  CLUS_3                         22                           68
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 2(2Q32.1) MUTATED       15      9     21
  AMP PEAK 2(2Q32.1) WILD-TYPE     42     62     48
D2V7, multiclass
        clus
vv       AMP PEAK 2(2Q32.1) MUTATED AMP PEAK 2(2Q32.1) WILD-TYPE
  CLUS_1                         15                           42
  CLUS_2                          9                           62
  CLUS_3                         21                           48
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 2(2Q32.1) MUTATED       14     24      7
  AMP PEAK 2(2Q32.1) WILD-TYPE     61     75     16
D2V8, multiclass
        clus
vv       AMP PEAK 2(2Q32.1) MUTATED AMP PEAK 2(2Q32.1) WILD-TYPE
  CLUS_1                         14                           61
  CLUS_2                         24                           75
  CLUS_3                          7                           16

Clustering(3) Variable = AMP PEAK 3(3Q22.3) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 3(3Q22.3) MUTATED       12      9      6     21     20
  AMP PEAK 3(3Q22.3) WILD-TYPE     59     31     31      0      8
D3V1, multiclass
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 3(3Q22.3) MUTATED       12      5      6     31      8
  AMP PEAK 3(3Q22.3) WILD-TYPE     26     19     27     17     30
D3V2, multiclass
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 3(3Q22.3) MUTATED       22      7     23     16
  AMP PEAK 3(3Q22.3) WILD-TYPE     17     60     36     16
D3V3, multiclass
        clus
vv       AMP PEAK 3(3Q22.3) MUTATED AMP PEAK 3(3Q22.3) WILD-TYPE
  CLUS_1                         22                           17
  CLUS_2                          7                           60
  CLUS_3                         23                           36
  CLUS_4                         16                           16
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 3(3Q22.3) MUTATED       37     19     12
  AMP PEAK 3(3Q22.3) WILD-TYPE     33     52     44
D3V4, multiclass
        clus
vv       AMP PEAK 3(3Q22.3) MUTATED AMP PEAK 3(3Q22.3) WILD-TYPE
  CLUS_1                         37                           33
  CLUS_2                         19                           52
  CLUS_3                         12                           44
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 3(3Q22.3) MUTATED       27     15     26
  AMP PEAK 3(3Q22.3) WILD-TYPE     38     50     41
D3V5, multiclass
        clus
vv       AMP PEAK 3(3Q22.3) MUTATED AMP PEAK 3(3Q22.3) WILD-TYPE
  CLUS_1                         27                           38
  CLUS_2                         15                           50
  CLUS_3                         26                           41
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 3(3Q22.3) MUTATED       10     21     37
  AMP PEAK 3(3Q22.3) WILD-TYPE     19     57     53
D3V6, multiclass
        clus
vv       AMP PEAK 3(3Q22.3) MUTATED AMP PEAK 3(3Q22.3) WILD-TYPE
  CLUS_1                         10                           19
  CLUS_2                         21                           57
  CLUS_3                         37                           53
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 3(3Q22.3) MUTATED       20     19     29
  AMP PEAK 3(3Q22.3) WILD-TYPE     37     52     40
D3V7, multiclass
        clus
vv       AMP PEAK 3(3Q22.3) MUTATED AMP PEAK 3(3Q22.3) WILD-TYPE
  CLUS_1                         20                           37
  CLUS_2                         19                           52
  CLUS_3                         29                           40
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 3(3Q22.3) MUTATED       17     46      5
  AMP PEAK 3(3Q22.3) WILD-TYPE     58     53     18
D3V8, multiclass
        clus
vv       AMP PEAK 3(3Q22.3) MUTATED AMP PEAK 3(3Q22.3) WILD-TYPE
  CLUS_1                         17                           58
  CLUS_2                         46                           53
  CLUS_3                          5                           18

Clustering(4) Variable = AMP PEAK 4(7Q22.1) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 4(7Q22.1) MUTATED       23     40     13     20     23
  AMP PEAK 4(7Q22.1) WILD-TYPE     48      0     24      1      5
D4V1, multiclass
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 4(7Q22.1) MUTATED       18      9     12     39     30
  AMP PEAK 4(7Q22.1) WILD-TYPE     20     15     21      9      8
D4V2, multiclass
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 4(7Q22.1) MUTATED       21     19     53     26
  AMP PEAK 4(7Q22.1) WILD-TYPE     18     48      6      6
D4V3, multiclass
        clus
vv       AMP PEAK 4(7Q22.1) MUTATED AMP PEAK 4(7Q22.1) WILD-TYPE
  CLUS_1                         21                           18
  CLUS_2                         19                           48
  CLUS_3                         53                            6
  CLUS_4                         26                            6
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 4(7Q22.1) MUTATED       65     28     26
  AMP PEAK 4(7Q22.1) WILD-TYPE      5     43     30
D4V4, multiclass
        clus
vv       AMP PEAK 4(7Q22.1) MUTATED AMP PEAK 4(7Q22.1) WILD-TYPE
  CLUS_1                         65                            5
  CLUS_2                         28                           43
  CLUS_3                         26                           30
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 4(7Q22.1) MUTATED       34     39     46
  AMP PEAK 4(7Q22.1) WILD-TYPE     31     26     21
D4V5, multiclass
        clus
vv       AMP PEAK 4(7Q22.1) MUTATED AMP PEAK 4(7Q22.1) WILD-TYPE
  CLUS_1                         34                           31
  CLUS_2                         39                           26
  CLUS_3                         46                           21
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 4(7Q22.1) MUTATED       16     45     58
  AMP PEAK 4(7Q22.1) WILD-TYPE     13     33     32
D4V6, multiclass
        clus
vv       AMP PEAK 4(7Q22.1) MUTATED AMP PEAK 4(7Q22.1) WILD-TYPE
  CLUS_1                         16                           13
  CLUS_2                         45                           33
  CLUS_3                         58                           32
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 4(7Q22.1) MUTATED       29     42     48
  AMP PEAK 4(7Q22.1) WILD-TYPE     28     29     21
D4V7, multiclass
        clus
vv       AMP PEAK 4(7Q22.1) MUTATED AMP PEAK 4(7Q22.1) WILD-TYPE
  CLUS_1                         29                           28
  CLUS_2                         42                           29
  CLUS_3                         48                           21
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 4(7Q22.1) MUTATED       44     68      7
  AMP PEAK 4(7Q22.1) WILD-TYPE     31     31     16
D4V8, multiclass
        clus
vv       AMP PEAK 4(7Q22.1) MUTATED AMP PEAK 4(7Q22.1) WILD-TYPE
  CLUS_1                         44                           31
  CLUS_2                         68                           31
  CLUS_3                          7                           16

Clustering(5) Variable = AMP PEAK 5(17Q25.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 5(17Q25.2) MUTATED       38     40     19     19     27
  AMP PEAK 5(17Q25.2) WILD-TYPE     33      0     18      2      1
D5V1, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 5(17Q25.2) MUTATED       23     14     20     42     32
  AMP PEAK 5(17Q25.2) WILD-TYPE     15     10     13      6      6
D5V2, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 5(17Q25.2) MUTATED       31     34     54     24
  AMP PEAK 5(17Q25.2) WILD-TYPE      8     33      5      8
D5V3, multiclass
        clus
vv       AMP PEAK 5(17Q25.2) MUTATED AMP PEAK 5(17Q25.2) WILD-TYPE
  CLUS_1                          31                             8
  CLUS_2                          34                            33
  CLUS_3                          54                             5
  CLUS_4                          24                             8
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 5(17Q25.2) MUTATED       66     47     30
  AMP PEAK 5(17Q25.2) WILD-TYPE      4     24     26
D5V4, multiclass
        clus
vv       AMP PEAK 5(17Q25.2) MUTATED AMP PEAK 5(17Q25.2) WILD-TYPE
  CLUS_1                          66                             4
  CLUS_2                          47                            24
  CLUS_3                          30                            26
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 5(17Q25.2) MUTATED       45     46     52
  AMP PEAK 5(17Q25.2) WILD-TYPE     20     19     15
D5V5, multiclass
        clus
vv       AMP PEAK 5(17Q25.2) MUTATED AMP PEAK 5(17Q25.2) WILD-TYPE
  CLUS_1                          45                            20
  CLUS_2                          46                            19
  CLUS_3                          52                            15
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 5(17Q25.2) MUTATED       21     57     65
  AMP PEAK 5(17Q25.2) WILD-TYPE      8     21     25
D5V6, multiclass
        clus
vv       AMP PEAK 5(17Q25.2) MUTATED AMP PEAK 5(17Q25.2) WILD-TYPE
  CLUS_1                          21                             8
  CLUS_2                          57                            21
  CLUS_3                          65                            25
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 5(17Q25.2) MUTATED       40     50     53
  AMP PEAK 5(17Q25.2) WILD-TYPE     17     21     16
D5V7, multiclass
        clus
vv       AMP PEAK 5(17Q25.2) MUTATED AMP PEAK 5(17Q25.2) WILD-TYPE
  CLUS_1                          40                            17
  CLUS_2                          50                            21
  CLUS_3                          53                            16
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 5(17Q25.2) MUTATED       54     74     15
  AMP PEAK 5(17Q25.2) WILD-TYPE     21     25      8
D5V8, multiclass
        clus
vv       AMP PEAK 5(17Q25.2) MUTATED AMP PEAK 5(17Q25.2) WILD-TYPE
  CLUS_1                          54                            21
  CLUS_2                          74                            25
  CLUS_3                          15                             8

Clustering(6) Variable = AMP PEAK 6(19P13.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 6(19P13.2) MUTATED        0     14      4      0      3
  AMP PEAK 6(19P13.2) WILD-TYPE     71     26     33     21     25
D6V1, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 6(19P13.2) MUTATED        1      2      2      5      7
  AMP PEAK 6(19P13.2) WILD-TYPE     37     22     31     43     31
D6V2, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 6(19P13.2) MUTATED        1      5     12      3
  AMP PEAK 6(19P13.2) WILD-TYPE     38     62     47     29
D6V3, multiclass
        clus
vv       AMP PEAK 6(19P13.2) MUTATED AMP PEAK 6(19P13.2) WILD-TYPE
  CLUS_1                           1                            38
  CLUS_2                           5                            62
  CLUS_3                          12                            47
  CLUS_4                           3                            29
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 6(19P13.2) MUTATED       10      3      8
  AMP PEAK 6(19P13.2) WILD-TYPE     60     68     48
D6V4, multiclass
        clus
vv       AMP PEAK 6(19P13.2) MUTATED AMP PEAK 6(19P13.2) WILD-TYPE
  CLUS_1                          10                            60
  CLUS_2                           3                            68
  CLUS_3                           8                            48
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 6(19P13.2) MUTATED        5      8      8
  AMP PEAK 6(19P13.2) WILD-TYPE     60     57     59
D6V5, multiclass
        clus
vv       AMP PEAK 6(19P13.2) MUTATED AMP PEAK 6(19P13.2) WILD-TYPE
  CLUS_1                           5                            60
  CLUS_2                           8                            57
  CLUS_3                           8                            59
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 6(19P13.2) MUTATED        2      8     11
  AMP PEAK 6(19P13.2) WILD-TYPE     27     70     79
D6V6, multiclass
        clus
vv       AMP PEAK 6(19P13.2) MUTATED AMP PEAK 6(19P13.2) WILD-TYPE
  CLUS_1                           2                            27
  CLUS_2                           8                            70
  CLUS_3                          11                            79
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 6(19P13.2) MUTATED        4      8      9
  AMP PEAK 6(19P13.2) WILD-TYPE     53     63     60
D6V7, multiclass
        clus
vv       AMP PEAK 6(19P13.2) MUTATED AMP PEAK 6(19P13.2) WILD-TYPE
  CLUS_1                           4                            53
  CLUS_2                           8                            63
  CLUS_3                           9                            60
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 6(19P13.2) MUTATED        7     12      2
  AMP PEAK 6(19P13.2) WILD-TYPE     68     87     21
D6V8, multiclass
        clus
vv       AMP PEAK 6(19P13.2) MUTATED AMP PEAK 6(19P13.2) WILD-TYPE
  CLUS_1                           7                            68
  CLUS_2                          12                            87
  CLUS_3                           2                            21

Clustering(7) Variable = DEL PEAK  1(1P36.31) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.31) MUTATED        7      0     23      0      7
  DEL PEAK  1(1P36.31) WILD-TYPE     64     40     14     21     21
D7V1, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.31) MUTATED        6     14      6      8      0
  DEL PEAK  1(1P36.31) WILD-TYPE     32     10     27     40     38
D7V2, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.31) MUTATED        5     27      5      0
  DEL PEAK  1(1P36.31) WILD-TYPE     34     40     54     32
D7V3, multiclass
        clus
vv       DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE
  CLUS_1                            5                             34
  CLUS_2                           27                             40
  CLUS_3                            5                             54
  CLUS_4                            0                             32
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.31) MUTATED        7     17     13
  DEL PEAK  1(1P36.31) WILD-TYPE     63     54     43
D7V4, multiclass
        clus
vv       DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE
  CLUS_1                            7                             63
  CLUS_2                           17                             54
  CLUS_3                           13                             43
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.31) MUTATED       12     12     13
  DEL PEAK  1(1P36.31) WILD-TYPE     53     53     54
D7V5, multiclass
        clus
vv       DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE
  CLUS_1                           12                             53
  CLUS_2                           12                             53
  CLUS_3                           13                             54
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.31) MUTATED        5     14     18
  DEL PEAK  1(1P36.31) WILD-TYPE     24     64     72
D7V6, multiclass
        clus
vv       DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE
  CLUS_1                            5                             24
  CLUS_2                           14                             64
  CLUS_3                           18                             72
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.31) MUTATED       11     14     12
  DEL PEAK  1(1P36.31) WILD-TYPE     46     57     57
D7V7, multiclass
        clus
vv       DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE
  CLUS_1                           11                             46
  CLUS_2                           14                             57
  CLUS_3                           12                             57
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.31) MUTATED       14     15      8
  DEL PEAK  1(1P36.31) WILD-TYPE     61     84     15
D7V8, multiclass
        clus
vv       DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE
  CLUS_1                           14                             61
  CLUS_2                           15                             84
  CLUS_3                            8                             15

Clustering(8) Variable = DEL PEAK  2(2Q37.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(2Q37.3) MUTATED        6      0      3      0      0
  DEL PEAK  2(2Q37.3) WILD-TYPE     65     40     34     21     28
D8V1, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(2Q37.3) MUTATED        1      3      3      0      0
  DEL PEAK  2(2Q37.3) WILD-TYPE     37     21     30     48     38
D8V2, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(2Q37.3) MUTATED        2      6      1      0
  DEL PEAK  2(2Q37.3) WILD-TYPE     37     61     58     32
D8V3, multiclass
        clus
vv       DEL PEAK  2(2Q37.3) MUTATED DEL PEAK  2(2Q37.3) WILD-TYPE
  CLUS_1                           2                            37
  CLUS_2                           6                            61
  CLUS_3                           1                            58
  CLUS_4                           0                            32
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(2Q37.3) MUTATED        0      7      2
  DEL PEAK  2(2Q37.3) WILD-TYPE     70     64     54
D8V4, multiclass
        clus
vv       DEL PEAK  2(2Q37.3) MUTATED DEL PEAK  2(2Q37.3) WILD-TYPE
  CLUS_1                           0                            70
  CLUS_2                           7                            64
  CLUS_3                           2                            54
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(2Q37.3) MUTATED        5      1      3
  DEL PEAK  2(2Q37.3) WILD-TYPE     60     64     64
D8V5, multiclass
        clus
vv       DEL PEAK  2(2Q37.3) MUTATED DEL PEAK  2(2Q37.3) WILD-TYPE
  CLUS_1                           5                            60
  CLUS_2                           1                            64
  CLUS_3                           3                            64
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(2Q37.3) MUTATED        1      4      4
  DEL PEAK  2(2Q37.3) WILD-TYPE     28     74     86
D8V6, multiclass
        clus
vv       DEL PEAK  2(2Q37.3) MUTATED DEL PEAK  2(2Q37.3) WILD-TYPE
  CLUS_1                           1                            28
  CLUS_2                           4                            74
  CLUS_3                           4                            86
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(2Q37.3) MUTATED        6      2      1
  DEL PEAK  2(2Q37.3) WILD-TYPE     51     69     68
D8V7, multiclass
        clus
vv       DEL PEAK  2(2Q37.3) MUTATED DEL PEAK  2(2Q37.3) WILD-TYPE
  CLUS_1                           6                            51
  CLUS_2                           2                            69
  CLUS_3                           1                            68
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(2Q37.3) MUTATED        3      4      2
  DEL PEAK  2(2Q37.3) WILD-TYPE     72     95     21
D8V8, multiclass
        clus
vv       DEL PEAK  2(2Q37.3) MUTATED DEL PEAK  2(2Q37.3) WILD-TYPE
  CLUS_1                           3                            72
  CLUS_2                           4                            95
  CLUS_3                           2                            21

Clustering(9) Variable = DEL PEAK  3(3P22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(3P22.1) MUTATED        2      0     10      0      3
  DEL PEAK  3(3P22.1) WILD-TYPE     69     40     27     21     25
D9V1, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(3P22.1) MUTATED        0      8      6      0      0
  DEL PEAK  3(3P22.1) WILD-TYPE     38     16     27     48     38
D9V2, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(3P22.1) MUTATED        1     14      0      0
  DEL PEAK  3(3P22.1) WILD-TYPE     38     53     59     32
D9V3, multiclass
        clus
vv       DEL PEAK  3(3P22.1) MUTATED DEL PEAK  3(3P22.1) WILD-TYPE
  CLUS_1                           1                            38
  CLUS_2                          14                            53
  CLUS_3                           0                            59
  CLUS_4                           0                            32
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(3P22.1) MUTATED        0     12      3
  DEL PEAK  3(3P22.1) WILD-TYPE     70     59     53
D9V4, multiclass
        clus
vv       DEL PEAK  3(3P22.1) MUTATED DEL PEAK  3(3P22.1) WILD-TYPE
  CLUS_1                           0                            70
  CLUS_2                          12                            59
  CLUS_3                           3                            53
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(3P22.1) MUTATED        7      6      2
  DEL PEAK  3(3P22.1) WILD-TYPE     58     59     65
D9V5, multiclass
        clus
vv       DEL PEAK  3(3P22.1) MUTATED DEL PEAK  3(3P22.1) WILD-TYPE
  CLUS_1                           7                            58
  CLUS_2                           6                            59
  CLUS_3                           2                            65
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(3P22.1) MUTATED        7      6      2
  DEL PEAK  3(3P22.1) WILD-TYPE     22     72     88
D9V6, multiclass
        clus
vv       DEL PEAK  3(3P22.1) MUTATED DEL PEAK  3(3P22.1) WILD-TYPE
  CLUS_1                           7                            22
  CLUS_2                           6                            72
  CLUS_3                           2                            88
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(3P22.1) MUTATED        8      6      1
  DEL PEAK  3(3P22.1) WILD-TYPE     49     65     68
D9V7, multiclass
        clus
vv       DEL PEAK  3(3P22.1) MUTATED DEL PEAK  3(3P22.1) WILD-TYPE
  CLUS_1                           8                            49
  CLUS_2                           6                            65
  CLUS_3                           1                            68
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(3P22.1) MUTATED        5      1      9
  DEL PEAK  3(3P22.1) WILD-TYPE     70     98     14
D9V8, multiclass
        clus
vv       DEL PEAK  3(3P22.1) MUTATED DEL PEAK  3(3P22.1) WILD-TYPE
  CLUS_1                           5                            70
  CLUS_2                           1                            98
  CLUS_3                           9                            14

Clustering(10) Variable = DEL PEAK  4(4Q34.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(4Q34.3) MUTATED        4      0     14      0      3
  DEL PEAK  4(4Q34.3) WILD-TYPE     67     40     23     21     25
D10V1, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(4Q34.3) MUTATED        1     12      4      2      0
  DEL PEAK  4(4Q34.3) WILD-TYPE     37     12     29     46     38
D10V2, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(4Q34.3) MUTATED        1     20      0      0
  DEL PEAK  4(4Q34.3) WILD-TYPE     38     47     59     32
D10V3, multiclass
        clus
vv       DEL PEAK  4(4Q34.3) MUTATED DEL PEAK  4(4Q34.3) WILD-TYPE
  CLUS_1                           1                            38
  CLUS_2                          20                            47
  CLUS_3                           0                            59
  CLUS_4                           0                            32
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(4Q34.3) MUTATED        1     10     10
  DEL PEAK  4(4Q34.3) WILD-TYPE     69     61     46
D10V4, multiclass
        clus
vv       DEL PEAK  4(4Q34.3) MUTATED DEL PEAK  4(4Q34.3) WILD-TYPE
  CLUS_1                           1                            69
  CLUS_2                          10                            61
  CLUS_3                          10                            46
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(4Q34.3) MUTATED        6      9      6
  DEL PEAK  4(4Q34.3) WILD-TYPE     59     56     61
D10V5, multiclass
        clus
vv       DEL PEAK  4(4Q34.3) MUTATED DEL PEAK  4(4Q34.3) WILD-TYPE
  CLUS_1                           6                            59
  CLUS_2                           9                            56
  CLUS_3                           6                            61
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(4Q34.3) MUTATED        3     11      7
  DEL PEAK  4(4Q34.3) WILD-TYPE     26     67     83
D10V6, multiclass
        clus
vv       DEL PEAK  4(4Q34.3) MUTATED DEL PEAK  4(4Q34.3) WILD-TYPE
  CLUS_1                           3                            26
  CLUS_2                          11                            67
  CLUS_3                           7                            83
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(4Q34.3) MUTATED        6      9      6
  DEL PEAK  4(4Q34.3) WILD-TYPE     51     62     63
D10V7, multiclass
        clus
vv       DEL PEAK  4(4Q34.3) MUTATED DEL PEAK  4(4Q34.3) WILD-TYPE
  CLUS_1                           6                            51
  CLUS_2                           9                            62
  CLUS_3                           6                            63
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(4Q34.3) MUTATED       11      6      4
  DEL PEAK  4(4Q34.3) WILD-TYPE     64     93     19
D10V8, multiclass
        clus
vv       DEL PEAK  4(4Q34.3) MUTATED DEL PEAK  4(4Q34.3) WILD-TYPE
  CLUS_1                          11                            64
  CLUS_2                           6                            93
  CLUS_3                           4                            19

Clustering(11) Variable = DEL PEAK  5(5P14.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(5P14.2) MUTATED        3      1      4      1      1
  DEL PEAK  5(5P14.2) WILD-TYPE     68     39     33     20     27
D11V1, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(5P14.2) MUTATED        1      7      0      2      0
  DEL PEAK  5(5P14.2) WILD-TYPE     37     17     33     46     38
D11V2, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(5P14.2) MUTATED        1      7      1      1
  DEL PEAK  5(5P14.2) WILD-TYPE     38     60     58     31
D11V3, multiclass
        clus
vv       DEL PEAK  5(5P14.2) MUTATED DEL PEAK  5(5P14.2) WILD-TYPE
  CLUS_1                           1                            38
  CLUS_2                           7                            60
  CLUS_3                           1                            58
  CLUS_4                           1                            31
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(5P14.2) MUTATED        1      3      6
  DEL PEAK  5(5P14.2) WILD-TYPE     69     68     50
D11V4, multiclass
        clus
vv       DEL PEAK  5(5P14.2) MUTATED DEL PEAK  5(5P14.2) WILD-TYPE
  CLUS_1                           1                            69
  CLUS_2                           3                            68
  CLUS_3                           6                            50
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(5P14.2) MUTATED        3      6      1
  DEL PEAK  5(5P14.2) WILD-TYPE     62     59     66
D11V5, multiclass
        clus
vv       DEL PEAK  5(5P14.2) MUTATED DEL PEAK  5(5P14.2) WILD-TYPE
  CLUS_1                           3                            62
  CLUS_2                           6                            59
  CLUS_3                           1                            66
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(5P14.2) MUTATED        0      6      4
  DEL PEAK  5(5P14.2) WILD-TYPE     29     72     86
D11V6, multiclass
        clus
vv       DEL PEAK  5(5P14.2) MUTATED DEL PEAK  5(5P14.2) WILD-TYPE
  CLUS_1                           0                            29
  CLUS_2                           6                            72
  CLUS_3                           4                            86
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(5P14.2) MUTATED        3      6      1
  DEL PEAK  5(5P14.2) WILD-TYPE     54     65     68
D11V7, multiclass
        clus
vv       DEL PEAK  5(5P14.2) MUTATED DEL PEAK  5(5P14.2) WILD-TYPE
  CLUS_1                           3                            54
  CLUS_2                           6                            65
  CLUS_3                           1                            68
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(5P14.2) MUTATED        6      4      0
  DEL PEAK  5(5P14.2) WILD-TYPE     69     95     23
D11V8, multiclass
        clus
vv       DEL PEAK  5(5P14.2) MUTATED DEL PEAK  5(5P14.2) WILD-TYPE
  CLUS_1                           6                            69
  CLUS_2                           4                            95
  CLUS_3                           0                            23

Clustering(12) Variable = DEL PEAK  6(5Q15) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(5Q15) MUTATED        4      0      4      1      2
  DEL PEAK  6(5Q15) WILD-TYPE     67     40     33     20     26
D12V1, multiclass
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(5Q15) MUTATED        1      7      1      1      1
  DEL PEAK  6(5Q15) WILD-TYPE     37     17     32     47     37
D12V2, multiclass
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(5Q15) MUTATED        1      9      0      1
  DEL PEAK  6(5Q15) WILD-TYPE     38     58     59     31
D12V3, multiclass
        clus
vv       DEL PEAK  6(5Q15) MUTATED DEL PEAK  6(5Q15) WILD-TYPE
  CLUS_1                         1                          38
  CLUS_2                         9                          58
  CLUS_3                         0                          59
  CLUS_4                         1                          31
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(5Q15) MUTATED        0      2      9
  DEL PEAK  6(5Q15) WILD-TYPE     70     69     47
D12V4, multiclass
        clus
vv       DEL PEAK  6(5Q15) MUTATED DEL PEAK  6(5Q15) WILD-TYPE
  CLUS_1                         0                          70
  CLUS_2                         2                          69
  CLUS_3                         9                          47
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(5Q15) MUTATED        3      6      2
  DEL PEAK  6(5Q15) WILD-TYPE     62     59     65
D12V5, multiclass
        clus
vv       DEL PEAK  6(5Q15) MUTATED DEL PEAK  6(5Q15) WILD-TYPE
  CLUS_1                         3                          62
  CLUS_2                         6                          59
  CLUS_3                         2                          65
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(5Q15) MUTATED        1      8      2
  DEL PEAK  6(5Q15) WILD-TYPE     28     70     88
D12V6, multiclass
        clus
vv       DEL PEAK  6(5Q15) MUTATED DEL PEAK  6(5Q15) WILD-TYPE
  CLUS_1                         1                          28
  CLUS_2                         8                          70
  CLUS_3                         2                          88
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(5Q15) MUTATED        3      6      2
  DEL PEAK  6(5Q15) WILD-TYPE     54     65     67
D12V7, multiclass
        clus
vv       DEL PEAK  6(5Q15) MUTATED DEL PEAK  6(5Q15) WILD-TYPE
  CLUS_1                         3                          54
  CLUS_2                         6                          65
  CLUS_3                         2                          67
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(5Q15) MUTATED        8      2      1
  DEL PEAK  6(5Q15) WILD-TYPE     67     97     22
D12V8, multiclass
        clus
vv       DEL PEAK  6(5Q15) MUTATED DEL PEAK  6(5Q15) WILD-TYPE
  CLUS_1                         8                          67
  CLUS_2                         2                          97
  CLUS_3                         1                          22

Clustering(13) Variable = DEL PEAK  7(5Q35.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(5Q35.2) MUTATED        4      0      5      0      2
  DEL PEAK  7(5Q35.2) WILD-TYPE     67     40     32     21     26
D13V1, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(5Q35.2) MUTATED        1      8      1      0      0
  DEL PEAK  7(5Q35.2) WILD-TYPE     37     16     32     48     38
D13V2, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(5Q35.2) MUTATED        1     10      0      0
  DEL PEAK  7(5Q35.2) WILD-TYPE     38     57     59     32
D13V3, multiclass
        clus
vv       DEL PEAK  7(5Q35.2) MUTATED DEL PEAK  7(5Q35.2) WILD-TYPE
  CLUS_1                           1                            38
  CLUS_2                          10                            57
  CLUS_3                           0                            59
  CLUS_4                           0                            32
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(5Q35.2) MUTATED        0      3      8
  DEL PEAK  7(5Q35.2) WILD-TYPE     70     68     48
D13V4, multiclass
        clus
vv       DEL PEAK  7(5Q35.2) MUTATED DEL PEAK  7(5Q35.2) WILD-TYPE
  CLUS_1                           0                            70
  CLUS_2                           3                            68
  CLUS_3                           8                            48
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(5Q35.2) MUTATED        2      6      3
  DEL PEAK  7(5Q35.2) WILD-TYPE     63     59     64
D13V5, multiclass
        clus
vv       DEL PEAK  7(5Q35.2) MUTATED DEL PEAK  7(5Q35.2) WILD-TYPE
  CLUS_1                           2                            63
  CLUS_2                           6                            59
  CLUS_3                           3                            64
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(5Q35.2) MUTATED        1      8      2
  DEL PEAK  7(5Q35.2) WILD-TYPE     28     70     88
D13V6, multiclass
        clus
vv       DEL PEAK  7(5Q35.2) MUTATED DEL PEAK  7(5Q35.2) WILD-TYPE
  CLUS_1                           1                            28
  CLUS_2                           8                            70
  CLUS_3                           2                            88
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(5Q35.2) MUTATED        2      7      2
  DEL PEAK  7(5Q35.2) WILD-TYPE     55     64     67
D13V7, multiclass
        clus
vv       DEL PEAK  7(5Q35.2) MUTATED DEL PEAK  7(5Q35.2) WILD-TYPE
  CLUS_1                           2                            55
  CLUS_2                           7                            64
  CLUS_3                           2                            67
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(5Q35.2) MUTATED        9      1      1
  DEL PEAK  7(5Q35.2) WILD-TYPE     66     98     22
D13V8, multiclass
        clus
vv       DEL PEAK  7(5Q35.2) MUTATED DEL PEAK  7(5Q35.2) WILD-TYPE
  CLUS_1                           9                            66
  CLUS_2                           1                            98
  CLUS_3                           1                            22

Clustering(14) Variable = DEL PEAK  8(6Q21) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(6Q21) MUTATED        5      0      7      0      5
  DEL PEAK  8(6Q21) WILD-TYPE     66     40     30     21     23
D14V1, multiclass
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(6Q21) MUTATED        2      6      5      3      0
  DEL PEAK  8(6Q21) WILD-TYPE     36     18     28     45     38
D14V2, multiclass
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(6Q21) MUTATED        2     12      3      0
  DEL PEAK  8(6Q21) WILD-TYPE     37     55     56     32
D14V3, multiclass
        clus
vv       DEL PEAK  8(6Q21) MUTATED DEL PEAK  8(6Q21) WILD-TYPE
  CLUS_1                         2                          37
  CLUS_2                        12                          55
  CLUS_3                         3                          56
  CLUS_4                         0                          32
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(6Q21) MUTATED        3      8      6
  DEL PEAK  8(6Q21) WILD-TYPE     67     63     50
D14V4, multiclass
        clus
vv       DEL PEAK  8(6Q21) MUTATED DEL PEAK  8(6Q21) WILD-TYPE
  CLUS_1                         3                          67
  CLUS_2                         8                          63
  CLUS_3                         6                          50
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(6Q21) MUTATED        5      6      6
  DEL PEAK  8(6Q21) WILD-TYPE     60     59     61
D14V5, multiclass
        clus
vv       DEL PEAK  8(6Q21) MUTATED DEL PEAK  8(6Q21) WILD-TYPE
  CLUS_1                         5                          60
  CLUS_2                         6                          59
  CLUS_3                         6                          61
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(6Q21) MUTATED        1      9      7
  DEL PEAK  8(6Q21) WILD-TYPE     28     69     83
D14V6, multiclass
        clus
vv       DEL PEAK  8(6Q21) MUTATED DEL PEAK  8(6Q21) WILD-TYPE
  CLUS_1                         1                          28
  CLUS_2                         9                          69
  CLUS_3                         7                          83
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(6Q21) MUTATED        5      8      4
  DEL PEAK  8(6Q21) WILD-TYPE     52     63     65
D14V7, multiclass
        clus
vv       DEL PEAK  8(6Q21) MUTATED DEL PEAK  8(6Q21) WILD-TYPE
  CLUS_1                         5                          52
  CLUS_2                         8                          63
  CLUS_3                         4                          65
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(6Q21) MUTATED        8      5      4
  DEL PEAK  8(6Q21) WILD-TYPE     67     94     19
D14V8, multiclass
        clus
vv       DEL PEAK  8(6Q21) MUTATED DEL PEAK  8(6Q21) WILD-TYPE
  CLUS_1                         8                          67
  CLUS_2                         5                          94
  CLUS_3                         4                          19

Clustering(15) Variable = DEL PEAK  9(6Q22.31) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(6Q22.31) MUTATED        6      0      7      0      5
  DEL PEAK  9(6Q22.31) WILD-TYPE     65     40     30     21     23
D15V1, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(6Q22.31) MUTATED        3      6      5      3      0
  DEL PEAK  9(6Q22.31) WILD-TYPE     35     18     28     45     38
D15V2, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(6Q22.31) MUTATED        2     13      3      0
  DEL PEAK  9(6Q22.31) WILD-TYPE     37     54     56     32
D15V3, multiclass
        clus
vv       DEL PEAK  9(6Q22.31) MUTATED DEL PEAK  9(6Q22.31) WILD-TYPE
  CLUS_1                            2                             37
  CLUS_2                           13                             54
  CLUS_3                            3                             56
  CLUS_4                            0                             32
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(6Q22.31) MUTATED        3      8      7
  DEL PEAK  9(6Q22.31) WILD-TYPE     67     63     49
D15V4, multiclass
        clus
vv       DEL PEAK  9(6Q22.31) MUTATED DEL PEAK  9(6Q22.31) WILD-TYPE
  CLUS_1                            3                             67
  CLUS_2                            8                             63
  CLUS_3                            7                             49
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(6Q22.31) MUTATED        5      7      6
  DEL PEAK  9(6Q22.31) WILD-TYPE     60     58     61
D15V5, multiclass
        clus
vv       DEL PEAK  9(6Q22.31) MUTATED DEL PEAK  9(6Q22.31) WILD-TYPE
  CLUS_1                            5                             60
  CLUS_2                            7                             58
  CLUS_3                            6                             61
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(6Q22.31) MUTATED        1     10      7
  DEL PEAK  9(6Q22.31) WILD-TYPE     28     68     83
D15V6, multiclass
        clus
vv       DEL PEAK  9(6Q22.31) MUTATED DEL PEAK  9(6Q22.31) WILD-TYPE
  CLUS_1                            1                             28
  CLUS_2                           10                             68
  CLUS_3                            7                             83
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(6Q22.31) MUTATED        5      9      4
  DEL PEAK  9(6Q22.31) WILD-TYPE     52     62     65
D15V7, multiclass
        clus
vv       DEL PEAK  9(6Q22.31) MUTATED DEL PEAK  9(6Q22.31) WILD-TYPE
  CLUS_1                            5                             52
  CLUS_2                            9                             62
  CLUS_3                            4                             65
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(6Q22.31) MUTATED        9      5      4
  DEL PEAK  9(6Q22.31) WILD-TYPE     66     94     19
D15V8, multiclass
        clus
vv       DEL PEAK  9(6Q22.31) MUTATED DEL PEAK  9(6Q22.31) WILD-TYPE
  CLUS_1                            9                             66
  CLUS_2                            5                             94
  CLUS_3                            4                             19

Clustering(16) Variable = DEL PEAK 10(9P21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(9P21.3) MUTATED        8      1     15      0      3
  DEL PEAK 10(9P21.3) WILD-TYPE     63     39     22     21     25
D16V1, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(9P21.3) MUTATED        4     14      5      1      0
  DEL PEAK 10(9P21.3) WILD-TYPE     34     10     28     47     38
D16V2, multiclass
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(9P21.3) MUTATED        3     23      0      1
  DEL PEAK 10(9P21.3) WILD-TYPE     36     44     59     31
D16V3, multiclass
        clus
vv       DEL PEAK 10(9P21.3) MUTATED DEL PEAK 10(9P21.3) WILD-TYPE
  CLUS_1                           3                            36
  CLUS_2                          23                            44
  CLUS_3                           0                            59
  CLUS_4                           1                            31
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(9P21.3) MUTATED        1     13     13
  DEL PEAK 10(9P21.3) WILD-TYPE     69     58     43
D16V4, multiclass
        clus
vv       DEL PEAK 10(9P21.3) MUTATED DEL PEAK 10(9P21.3) WILD-TYPE
  CLUS_1                           1                            69
  CLUS_2                          13                            58
  CLUS_3                          13                            43
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(9P21.3) MUTATED        4     14      9
  DEL PEAK 10(9P21.3) WILD-TYPE     61     51     58
D16V5, multiclass
        clus
vv       DEL PEAK 10(9P21.3) MUTATED DEL PEAK 10(9P21.3) WILD-TYPE
  CLUS_1                           4                            61
  CLUS_2                          14                            51
  CLUS_3                           9                            58
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(9P21.3) MUTATED        5     16      6
  DEL PEAK 10(9P21.3) WILD-TYPE     24     62     84
D16V6, multiclass
        clus
vv       DEL PEAK 10(9P21.3) MUTATED DEL PEAK 10(9P21.3) WILD-TYPE
  CLUS_1                           5                            24
  CLUS_2                          16                            62
  CLUS_3                           6                            84
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(9P21.3) MUTATED        5     15      7
  DEL PEAK 10(9P21.3) WILD-TYPE     52     56     62
D16V7, multiclass
        clus
vv       DEL PEAK 10(9P21.3) MUTATED DEL PEAK 10(9P21.3) WILD-TYPE
  CLUS_1                           5                            52
  CLUS_2                          15                            56
  CLUS_3                           7                            62
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(9P21.3) MUTATED       15      6      6
  DEL PEAK 10(9P21.3) WILD-TYPE     60     93     17
D16V8, multiclass
        clus
vv       DEL PEAK 10(9P21.3) MUTATED DEL PEAK 10(9P21.3) WILD-TYPE
  CLUS_1                          15                            60
  CLUS_2                           6                            93
  CLUS_3                           6                            17

Clustering(17) Variable = DEL PEAK 11(10P11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(10P11.21) MUTATED        1      0      7      0      4
  DEL PEAK 11(10P11.21) WILD-TYPE     70     40     30     21     24
D17V1, multiclass
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(10P11.21) MUTATED        0      7      3      1      0
  DEL PEAK 11(10P11.21) WILD-TYPE     38     17     30     47     38
D17V2, multiclass
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(10P11.21) MUTATED        0     11      1      0
  DEL PEAK 11(10P11.21) WILD-TYPE     39     56     58     32
D17V3, multiclass
        clus
vv       DEL PEAK 11(10P11.21) MUTATED DEL PEAK 11(10P11.21) WILD-TYPE
  CLUS_1                             0                              39
  CLUS_2                            11                              56
  CLUS_3                             1                              58
  CLUS_4                             0                              32
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(10P11.21) MUTATED        1      8      3
  DEL PEAK 11(10P11.21) WILD-TYPE     69     63     53
D17V4, multiclass
        clus
vv       DEL PEAK 11(10P11.21) MUTATED DEL PEAK 11(10P11.21) WILD-TYPE
  CLUS_1                             1                              69
  CLUS_2                             8                              63
  CLUS_3                             3                              53
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(10P11.21) MUTATED        3      6      3
  DEL PEAK 11(10P11.21) WILD-TYPE     62     59     64
D17V5, multiclass
        clus
vv       DEL PEAK 11(10P11.21) MUTATED DEL PEAK 11(10P11.21) WILD-TYPE
  CLUS_1                             3                              62
  CLUS_2                             6                              59
  CLUS_3                             3                              64
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(10P11.21) MUTATED        5      5      2
  DEL PEAK 11(10P11.21) WILD-TYPE     24     73     88
D17V6, multiclass
        clus
vv       DEL PEAK 11(10P11.21) MUTATED DEL PEAK 11(10P11.21) WILD-TYPE
  CLUS_1                             5                              24
  CLUS_2                             5                              73
  CLUS_3                             2                              88
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(10P11.21) MUTATED        3      7      2
  DEL PEAK 11(10P11.21) WILD-TYPE     54     64     67
D17V7, multiclass
        clus
vv       DEL PEAK 11(10P11.21) MUTATED DEL PEAK 11(10P11.21) WILD-TYPE
  CLUS_1                             3                              54
  CLUS_2                             7                              64
  CLUS_3                             2                              67
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(10P11.21) MUTATED        5      2      5
  DEL PEAK 11(10P11.21) WILD-TYPE     70     97     18
D17V8, multiclass
        clus
vv       DEL PEAK 11(10P11.21) MUTATED DEL PEAK 11(10P11.21) WILD-TYPE
  CLUS_1                             5                              70
  CLUS_2                             2                              97
  CLUS_3                             5                              18

Clustering(18) Variable = DEL PEAK 12(11Q22.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(11Q22.3) MUTATED        3      1     10      0      4
  DEL PEAK 12(11Q22.3) WILD-TYPE     68     39     27     21     24
D18V1, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(11Q22.3) MUTATED        2      8      5      2      0
  DEL PEAK 12(11Q22.3) WILD-TYPE     36     16     28     46     38
D18V2, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(11Q22.3) MUTATED        2     14      1      1
  DEL PEAK 12(11Q22.3) WILD-TYPE     37     53     58     31
D18V3, multiclass
        clus
vv       DEL PEAK 12(11Q22.3) MUTATED DEL PEAK 12(11Q22.3) WILD-TYPE
  CLUS_1                            2                             37
  CLUS_2                           14                             53
  CLUS_3                            1                             58
  CLUS_4                            1                             31
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(11Q22.3) MUTATED        2      8      8
  DEL PEAK 12(11Q22.3) WILD-TYPE     68     63     48
D18V4, multiclass
        clus
vv       DEL PEAK 12(11Q22.3) MUTATED DEL PEAK 12(11Q22.3) WILD-TYPE
  CLUS_1                            2                             68
  CLUS_2                            8                             63
  CLUS_3                            8                             48
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(11Q22.3) MUTATED        5      8      5
  DEL PEAK 12(11Q22.3) WILD-TYPE     60     57     62
D18V5, multiclass
        clus
vv       DEL PEAK 12(11Q22.3) MUTATED DEL PEAK 12(11Q22.3) WILD-TYPE
  CLUS_1                            5                             60
  CLUS_2                            8                             57
  CLUS_3                            5                             62
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(11Q22.3) MUTATED        4     10      4
  DEL PEAK 12(11Q22.3) WILD-TYPE     25     68     86
D18V6, multiclass
        clus
vv       DEL PEAK 12(11Q22.3) MUTATED DEL PEAK 12(11Q22.3) WILD-TYPE
  CLUS_1                            4                             25
  CLUS_2                           10                             68
  CLUS_3                            4                             86
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(11Q22.3) MUTATED        5     10      3
  DEL PEAK 12(11Q22.3) WILD-TYPE     52     61     66
D18V7, multiclass
        clus
vv       DEL PEAK 12(11Q22.3) MUTATED DEL PEAK 12(11Q22.3) WILD-TYPE
  CLUS_1                            5                             52
  CLUS_2                           10                             61
  CLUS_3                            3                             66
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(11Q22.3) MUTATED        9      5      4
  DEL PEAK 12(11Q22.3) WILD-TYPE     66     94     19
D18V8, multiclass
        clus
vv       DEL PEAK 12(11Q22.3) MUTATED DEL PEAK 12(11Q22.3) WILD-TYPE
  CLUS_1                            9                             66
  CLUS_2                            5                             94
  CLUS_3                            4                             19

Clustering(19) Variable = DEL PEAK 13(11Q24.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(11Q24.2) MUTATED        3      1     10      1      4
  DEL PEAK 13(11Q24.2) WILD-TYPE     68     39     27     20     24
D19V1, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(11Q24.2) MUTATED        2      9      5      2      0
  DEL PEAK 13(11Q24.2) WILD-TYPE     36     15     28     46     38
D19V2, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(11Q24.2) MUTATED        2     14      1      2
  DEL PEAK 13(11Q24.2) WILD-TYPE     37     53     58     30
D19V3, multiclass
        clus
vv       DEL PEAK 13(11Q24.2) MUTATED DEL PEAK 13(11Q24.2) WILD-TYPE
  CLUS_1                            2                             37
  CLUS_2                           14                             53
  CLUS_3                            1                             58
  CLUS_4                            2                             30
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(11Q24.2) MUTATED        3      9      7
  DEL PEAK 13(11Q24.2) WILD-TYPE     67     62     49
D19V4, multiclass
        clus
vv       DEL PEAK 13(11Q24.2) MUTATED DEL PEAK 13(11Q24.2) WILD-TYPE
  CLUS_1                            3                             67
  CLUS_2                            9                             62
  CLUS_3                            7                             49
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(11Q24.2) MUTATED        5      7      7
  DEL PEAK 13(11Q24.2) WILD-TYPE     60     58     60
D19V5, multiclass
        clus
vv       DEL PEAK 13(11Q24.2) MUTATED DEL PEAK 13(11Q24.2) WILD-TYPE
  CLUS_1                            5                             60
  CLUS_2                            7                             58
  CLUS_3                            7                             60
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(11Q24.2) MUTATED        4     10      5
  DEL PEAK 13(11Q24.2) WILD-TYPE     25     68     85
D19V6, multiclass
        clus
vv       DEL PEAK 13(11Q24.2) MUTATED DEL PEAK 13(11Q24.2) WILD-TYPE
  CLUS_1                            4                             25
  CLUS_2                           10                             68
  CLUS_3                            5                             85
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(11Q24.2) MUTATED        5     10      4
  DEL PEAK 13(11Q24.2) WILD-TYPE     52     61     65
D19V7, multiclass
        clus
vv       DEL PEAK 13(11Q24.2) MUTATED DEL PEAK 13(11Q24.2) WILD-TYPE
  CLUS_1                            5                             52
  CLUS_2                           10                             61
  CLUS_3                            4                             65
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(11Q24.2) MUTATED       10      5      4
  DEL PEAK 13(11Q24.2) WILD-TYPE     65     94     19
D19V8, multiclass
        clus
vv       DEL PEAK 13(11Q24.2) MUTATED DEL PEAK 13(11Q24.2) WILD-TYPE
  CLUS_1                           10                             65
  CLUS_2                            5                             94
  CLUS_3                            4                             19

Clustering(20) Variable = DEL PEAK 14(14Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(14Q11.2) MUTATED        5      1     25      2      6
  DEL PEAK 14(14Q11.2) WILD-TYPE     66     39     12     19     22
D20V1, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(14Q11.2) MUTATED       11     10      3      8      2
  DEL PEAK 14(14Q11.2) WILD-TYPE     27     14     30     40     36
D20V2, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(14Q11.2) MUTATED       10     21      5      3
  DEL PEAK 14(14Q11.2) WILD-TYPE     29     46     54     29
D20V3, multiclass
        clus
vv       DEL PEAK 14(14Q11.2) MUTATED DEL PEAK 14(14Q11.2) WILD-TYPE
  CLUS_1                           10                             29
  CLUS_2                           21                             46
  CLUS_3                            5                             54
  CLUS_4                            3                             29
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(14Q11.2) MUTATED        6     16     17
  DEL PEAK 14(14Q11.2) WILD-TYPE     64     55     39
D20V4, multiclass
        clus
vv       DEL PEAK 14(14Q11.2) MUTATED DEL PEAK 14(14Q11.2) WILD-TYPE
  CLUS_1                            6                             64
  CLUS_2                           16                             55
  CLUS_3                           17                             39
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(14Q11.2) MUTATED       11     15     13
  DEL PEAK 14(14Q11.2) WILD-TYPE     54     50     54
D20V5, multiclass
        clus
vv       DEL PEAK 14(14Q11.2) MUTATED DEL PEAK 14(14Q11.2) WILD-TYPE
  CLUS_1                           11                             54
  CLUS_2                           15                             50
  CLUS_3                           13                             54
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(14Q11.2) MUTATED        7     17     15
  DEL PEAK 14(14Q11.2) WILD-TYPE     22     61     75
D20V6, multiclass
        clus
vv       DEL PEAK 14(14Q11.2) MUTATED DEL PEAK 14(14Q11.2) WILD-TYPE
  CLUS_1                            7                             22
  CLUS_2                           17                             61
  CLUS_3                           15                             75
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(14Q11.2) MUTATED       10     17     12
  DEL PEAK 14(14Q11.2) WILD-TYPE     47     54     57
D20V7, multiclass
        clus
vv       DEL PEAK 14(14Q11.2) MUTATED DEL PEAK 14(14Q11.2) WILD-TYPE
  CLUS_1                           10                             47
  CLUS_2                           17                             54
  CLUS_3                           12                             57
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(14Q11.2) MUTATED       17     16      6
  DEL PEAK 14(14Q11.2) WILD-TYPE     58     83     17
D20V8, multiclass
        clus
vv       DEL PEAK 14(14Q11.2) MUTATED DEL PEAK 14(14Q11.2) WILD-TYPE
  CLUS_1                           17                             58
  CLUS_2                           16                             83
  CLUS_3                            6                             17

Clustering(21) Variable = DEL PEAK 15(14Q32.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(14Q32.2) MUTATED        7      0     25      1      6
  DEL PEAK 15(14Q32.2) WILD-TYPE     64     40     12     20     22
D21V1, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(14Q32.2) MUTATED       11     11      3      8      2
  DEL PEAK 15(14Q32.2) WILD-TYPE     27     13     30     40     36
D21V2, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(14Q32.2) MUTATED        8     24      4      3
  DEL PEAK 15(14Q32.2) WILD-TYPE     31     43     55     29
D21V3, multiclass
        clus
vv       DEL PEAK 15(14Q32.2) MUTATED DEL PEAK 15(14Q32.2) WILD-TYPE
  CLUS_1                            8                             31
  CLUS_2                           24                             43
  CLUS_3                            4                             55
  CLUS_4                            3                             29
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(14Q32.2) MUTATED        5     17     17
  DEL PEAK 15(14Q32.2) WILD-TYPE     65     54     39
D21V4, multiclass
        clus
vv       DEL PEAK 15(14Q32.2) MUTATED DEL PEAK 15(14Q32.2) WILD-TYPE
  CLUS_1                            5                             65
  CLUS_2                           17                             54
  CLUS_3                           17                             39
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(14Q32.2) MUTATED       11     15     13
  DEL PEAK 15(14Q32.2) WILD-TYPE     54     50     54
D21V5, multiclass
        clus
vv       DEL PEAK 15(14Q32.2) MUTATED DEL PEAK 15(14Q32.2) WILD-TYPE
  CLUS_1                           11                             54
  CLUS_2                           15                             50
  CLUS_3                           13                             54
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(14Q32.2) MUTATED        7     17     15
  DEL PEAK 15(14Q32.2) WILD-TYPE     22     61     75
D21V6, multiclass
        clus
vv       DEL PEAK 15(14Q32.2) MUTATED DEL PEAK 15(14Q32.2) WILD-TYPE
  CLUS_1                            7                             22
  CLUS_2                           17                             61
  CLUS_3                           15                             75
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(14Q32.2) MUTATED       10     17     12
  DEL PEAK 15(14Q32.2) WILD-TYPE     47     54     57
D21V7, multiclass
        clus
vv       DEL PEAK 15(14Q32.2) MUTATED DEL PEAK 15(14Q32.2) WILD-TYPE
  CLUS_1                           10                             47
  CLUS_2                           17                             54
  CLUS_3                           12                             57
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(14Q32.2) MUTATED       18     15      6
  DEL PEAK 15(14Q32.2) WILD-TYPE     57     84     17
D21V8, multiclass
        clus
vv       DEL PEAK 15(14Q32.2) MUTATED DEL PEAK 15(14Q32.2) WILD-TYPE
  CLUS_1                           18                             57
  CLUS_2                           15                             84
  CLUS_3                            6                             17

Clustering(22) Variable = DEL PEAK 16(15Q15.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(15Q15.2) MUTATED        4      0     13      1      4
  DEL PEAK 16(15Q15.2) WILD-TYPE     67     40     24     20     24
D22V1, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(15Q15.2) MUTATED        7      9      2      2      0
  DEL PEAK 16(15Q15.2) WILD-TYPE     31     15     31     46     38
D22V2, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(15Q15.2) MUTATED        4     16      2      0
  DEL PEAK 16(15Q15.2) WILD-TYPE     35     51     57     32
D22V3, multiclass
        clus
vv       DEL PEAK 16(15Q15.2) MUTATED DEL PEAK 16(15Q15.2) WILD-TYPE
  CLUS_1                            4                             35
  CLUS_2                           16                             51
  CLUS_3                            2                             57
  CLUS_4                            0                             32
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(15Q15.2) MUTATED        3      8     11
  DEL PEAK 16(15Q15.2) WILD-TYPE     67     63     45
D22V4, multiclass
        clus
vv       DEL PEAK 16(15Q15.2) MUTATED DEL PEAK 16(15Q15.2) WILD-TYPE
  CLUS_1                            3                             67
  CLUS_2                            8                             63
  CLUS_3                           11                             45
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(15Q15.2) MUTATED        4     12      6
  DEL PEAK 16(15Q15.2) WILD-TYPE     61     53     61
D22V5, multiclass
        clus
vv       DEL PEAK 16(15Q15.2) MUTATED DEL PEAK 16(15Q15.2) WILD-TYPE
  CLUS_1                            4                             61
  CLUS_2                           12                             53
  CLUS_3                            6                             61
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(15Q15.2) MUTATED        2     13      7
  DEL PEAK 16(15Q15.2) WILD-TYPE     27     65     83
D22V6, multiclass
        clus
vv       DEL PEAK 16(15Q15.2) MUTATED DEL PEAK 16(15Q15.2) WILD-TYPE
  CLUS_1                            2                             27
  CLUS_2                           13                             65
  CLUS_3                            7                             83
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(15Q15.2) MUTATED        3     13      6
  DEL PEAK 16(15Q15.2) WILD-TYPE     54     58     63
D22V7, multiclass
        clus
vv       DEL PEAK 16(15Q15.2) MUTATED DEL PEAK 16(15Q15.2) WILD-TYPE
  CLUS_1                            3                             54
  CLUS_2                           13                             58
  CLUS_3                            6                             63
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(15Q15.2) MUTATED       13      6      3
  DEL PEAK 16(15Q15.2) WILD-TYPE     62     93     20
D22V8, multiclass
        clus
vv       DEL PEAK 16(15Q15.2) MUTATED DEL PEAK 16(15Q15.2) WILD-TYPE
  CLUS_1                           13                             62
  CLUS_2                            6                             93
  CLUS_3                            3                             20

Clustering(23) Variable = DEL PEAK 17(16Q24.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(16Q24.1) MUTATED        2      0      4      0      1
  DEL PEAK 17(16Q24.1) WILD-TYPE     69     40     33     21     27
D23V1, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(16Q24.1) MUTATED        0      5      2      0      0
  DEL PEAK 17(16Q24.1) WILD-TYPE     38     19     31     48     38
D23V2, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(16Q24.1) MUTATED        1      6      0      0
  DEL PEAK 17(16Q24.1) WILD-TYPE     38     61     59     32
D23V3, multiclass
        clus
vv       DEL PEAK 17(16Q24.1) MUTATED DEL PEAK 17(16Q24.1) WILD-TYPE
  CLUS_1                            1                             38
  CLUS_2                            6                             61
  CLUS_3                            0                             59
  CLUS_4                            0                             32
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(16Q24.1) MUTATED        0      3      4
  DEL PEAK 17(16Q24.1) WILD-TYPE     70     68     52
D23V4, multiclass
        clus
vv       DEL PEAK 17(16Q24.1) MUTATED DEL PEAK 17(16Q24.1) WILD-TYPE
  CLUS_1                            0                             70
  CLUS_2                            3                             68
  CLUS_3                            4                             52
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(16Q24.1) MUTATED        1      3      3
  DEL PEAK 17(16Q24.1) WILD-TYPE     64     62     64
D23V5, multiclass
        clus
vv       DEL PEAK 17(16Q24.1) MUTATED DEL PEAK 17(16Q24.1) WILD-TYPE
  CLUS_1                            1                             64
  CLUS_2                            3                             62
  CLUS_3                            3                             64
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(16Q24.1) MUTATED        1      4      2
  DEL PEAK 17(16Q24.1) WILD-TYPE     28     74     88
D23V6, multiclass
        clus
vv       DEL PEAK 17(16Q24.1) MUTATED DEL PEAK 17(16Q24.1) WILD-TYPE
  CLUS_1                            1                             28
  CLUS_2                            4                             74
  CLUS_3                            2                             88
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(16Q24.1) MUTATED        2      3      2
  DEL PEAK 17(16Q24.1) WILD-TYPE     55     68     67
D23V7, multiclass
        clus
vv       DEL PEAK 17(16Q24.1) MUTATED DEL PEAK 17(16Q24.1) WILD-TYPE
  CLUS_1                            2                             55
  CLUS_2                            3                             68
  CLUS_3                            2                             67
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(16Q24.1) MUTATED        4      1      2
  DEL PEAK 17(16Q24.1) WILD-TYPE     71     98     21
D23V8, multiclass
        clus
vv       DEL PEAK 17(16Q24.1) MUTATED DEL PEAK 17(16Q24.1) WILD-TYPE
  CLUS_1                            4                             71
  CLUS_2                            1                             98
  CLUS_3                            2                             21

Clustering(24) Variable = DEL PEAK 18(19P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(19P13.3) MUTATED        2      3      7      0      4
  DEL PEAK 18(19P13.3) WILD-TYPE     69     37     30     21     24
D24V1, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(19P13.3) MUTATED        1      5      5      3      1
  DEL PEAK 18(19P13.3) WILD-TYPE     37     19     28     45     37
D24V2, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(19P13.3) MUTATED        5      9      2      0
  DEL PEAK 18(19P13.3) WILD-TYPE     34     58     57     32
D24V3, multiclass
        clus
vv       DEL PEAK 18(19P13.3) MUTATED DEL PEAK 18(19P13.3) WILD-TYPE
  CLUS_1                            5                             34
  CLUS_2                            9                             58
  CLUS_3                            2                             57
  CLUS_4                            0                             32
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(19P13.3) MUTATED        5     10      1
  DEL PEAK 18(19P13.3) WILD-TYPE     65     61     55
D24V4, multiclass
        clus
vv       DEL PEAK 18(19P13.3) MUTATED DEL PEAK 18(19P13.3) WILD-TYPE
  CLUS_1                            5                             65
  CLUS_2                           10                             61
  CLUS_3                            1                             55
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(19P13.3) MUTATED        7      6      3
  DEL PEAK 18(19P13.3) WILD-TYPE     58     59     64
D24V5, multiclass
        clus
vv       DEL PEAK 18(19P13.3) MUTATED DEL PEAK 18(19P13.3) WILD-TYPE
  CLUS_1                            7                             58
  CLUS_2                            6                             59
  CLUS_3                            3                             64
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(19P13.3) MUTATED        5      5      6
  DEL PEAK 18(19P13.3) WILD-TYPE     24     73     84
D24V6, multiclass
        clus
vv       DEL PEAK 18(19P13.3) MUTATED DEL PEAK 18(19P13.3) WILD-TYPE
  CLUS_1                            5                             24
  CLUS_2                            5                             73
  CLUS_3                            6                             84
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(19P13.3) MUTATED        7      7      2
  DEL PEAK 18(19P13.3) WILD-TYPE     50     64     67
D24V7, multiclass
        clus
vv       DEL PEAK 18(19P13.3) MUTATED DEL PEAK 18(19P13.3) WILD-TYPE
  CLUS_1                            7                             50
  CLUS_2                            7                             64
  CLUS_3                            2                             67
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(19P13.3) MUTATED        4      7      5
  DEL PEAK 18(19P13.3) WILD-TYPE     71     92     18
D24V8, multiclass
        clus
vv       DEL PEAK 18(19P13.3) MUTATED DEL PEAK 18(19P13.3) WILD-TYPE
  CLUS_1                            4                             71
  CLUS_2                            7                             92
  CLUS_3                            5                             18

Clustering(25) Variable = DEL PEAK 19(19Q13.42) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 19(19Q13.42) MUTATED        2      2      7      1      3
  DEL PEAK 19(19Q13.42) WILD-TYPE     69     38     30     20     25
D25V1, multiclass
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 19(19Q13.42) MUTATED        3      5      3      4      0
  DEL PEAK 19(19Q13.42) WILD-TYPE     35     19     30     44     38
D25V2, multiclass
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(19Q13.42) MUTATED        5      9      1      0
  DEL PEAK 19(19Q13.42) WILD-TYPE     34     58     58     32
D25V3, multiclass
        clus
vv       DEL PEAK 19(19Q13.42) MUTATED DEL PEAK 19(19Q13.42) WILD-TYPE
  CLUS_1                             5                              34
  CLUS_2                             9                              58
  CLUS_3                             1                              58
  CLUS_4                             0                              32
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(19Q13.42) MUTATED        4      9      2
  DEL PEAK 19(19Q13.42) WILD-TYPE     66     62     54
D25V4, multiclass
        clus
vv       DEL PEAK 19(19Q13.42) MUTATED DEL PEAK 19(19Q13.42) WILD-TYPE
  CLUS_1                             4                              66
  CLUS_2                             9                              62
  CLUS_3                             2                              54
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(19Q13.42) MUTATED        6      6      3
  DEL PEAK 19(19Q13.42) WILD-TYPE     59     59     64
D25V5, multiclass
        clus
vv       DEL PEAK 19(19Q13.42) MUTATED DEL PEAK 19(19Q13.42) WILD-TYPE
  CLUS_1                             6                              59
  CLUS_2                             6                              59
  CLUS_3                             3                              64
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(19Q13.42) MUTATED        3      6      6
  DEL PEAK 19(19Q13.42) WILD-TYPE     26     72     84
D25V6, multiclass
        clus
vv       DEL PEAK 19(19Q13.42) MUTATED DEL PEAK 19(19Q13.42) WILD-TYPE
  CLUS_1                             3                              26
  CLUS_2                             6                              72
  CLUS_3                             6                              84
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(19Q13.42) MUTATED        8      6      1
  DEL PEAK 19(19Q13.42) WILD-TYPE     49     65     68
D25V7, multiclass
        clus
vv       DEL PEAK 19(19Q13.42) MUTATED DEL PEAK 19(19Q13.42) WILD-TYPE
  CLUS_1                             8                              49
  CLUS_2                             6                              65
  CLUS_3                             1                              68
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(19Q13.42) MUTATED        6      7      2
  DEL PEAK 19(19Q13.42) WILD-TYPE     69     92     21
D25V8, multiclass
        clus
vv       DEL PEAK 19(19Q13.42) MUTATED DEL PEAK 19(19Q13.42) WILD-TYPE
  CLUS_1                             6                              69
  CLUS_2                             7                              92
  CLUS_3                             2                              21

Clustering(26) Variable = DEL PEAK 20(21Q22.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 20(21Q22.3) MUTATED        5      4      9      2     13
  DEL PEAK 20(21Q22.3) WILD-TYPE     66     36     28     19     15
D26V1, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 20(21Q22.3) MUTATED        6      7      6      8      2
  DEL PEAK 20(21Q22.3) WILD-TYPE     32     17     27     40     36
D26V2, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(21Q22.3) MUTATED        8     13      8      4
  DEL PEAK 20(21Q22.3) WILD-TYPE     31     54     51     28
D26V3, multiclass
        clus
vv       DEL PEAK 20(21Q22.3) MUTATED DEL PEAK 20(21Q22.3) WILD-TYPE
  CLUS_1                            8                             31
  CLUS_2                           13                             54
  CLUS_3                            8                             51
  CLUS_4                            4                             28
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(21Q22.3) MUTATED       12     12      9
  DEL PEAK 20(21Q22.3) WILD-TYPE     58     59     47
D26V4, multiclass
        clus
vv       DEL PEAK 20(21Q22.3) MUTATED DEL PEAK 20(21Q22.3) WILD-TYPE
  CLUS_1                           12                             58
  CLUS_2                           12                             59
  CLUS_3                            9                             47
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(21Q22.3) MUTATED       12      8     13
  DEL PEAK 20(21Q22.3) WILD-TYPE     53     57     54
D26V5, multiclass
        clus
vv       DEL PEAK 20(21Q22.3) MUTATED DEL PEAK 20(21Q22.3) WILD-TYPE
  CLUS_1                           12                             53
  CLUS_2                            8                             57
  CLUS_3                           13                             54
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(21Q22.3) MUTATED        3     13     17
  DEL PEAK 20(21Q22.3) WILD-TYPE     26     65     73
D26V6, multiclass
        clus
vv       DEL PEAK 20(21Q22.3) MUTATED DEL PEAK 20(21Q22.3) WILD-TYPE
  CLUS_1                            3                             26
  CLUS_2                           13                             65
  CLUS_3                           17                             73
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(21Q22.3) MUTATED        8      9     16
  DEL PEAK 20(21Q22.3) WILD-TYPE     49     62     53
D26V7, multiclass
        clus
vv       DEL PEAK 20(21Q22.3) MUTATED DEL PEAK 20(21Q22.3) WILD-TYPE
  CLUS_1                            8                             49
  CLUS_2                            9                             62
  CLUS_3                           16                             53
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(21Q22.3) MUTATED       11     18      4
  DEL PEAK 20(21Q22.3) WILD-TYPE     64     81     19
D26V8, multiclass
        clus
vv       DEL PEAK 20(21Q22.3) MUTATED DEL PEAK 20(21Q22.3) WILD-TYPE
  CLUS_1                           11                             64
  CLUS_2                           18                             81
  CLUS_3                            4                             19

Clustering(27) Variable = DEL PEAK 21(XP11.22) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 21(XP11.22) MUTATED        4      0     12      0      2
  DEL PEAK 21(XP11.22) WILD-TYPE     67     40     25     21     26
D27V1, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 21(XP11.22) MUTATED        1     10      4      1      0
  DEL PEAK 21(XP11.22) WILD-TYPE     37     14     29     47     38
D27V2, multiclass
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(XP11.22) MUTATED        2     16      0      0
  DEL PEAK 21(XP11.22) WILD-TYPE     37     51     59     32
D27V3, multiclass
        clus
vv       DEL PEAK 21(XP11.22) MUTATED DEL PEAK 21(XP11.22) WILD-TYPE
  CLUS_1                            2                             37
  CLUS_2                           16                             51
  CLUS_3                            0                             59
  CLUS_4                            0                             32
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(XP11.22) MUTATED        1      9      8
  DEL PEAK 21(XP11.22) WILD-TYPE     69     62     48
D27V4, multiclass
        clus
vv       DEL PEAK 21(XP11.22) MUTATED DEL PEAK 21(XP11.22) WILD-TYPE
  CLUS_1                            1                             69
  CLUS_2                            9                             62
  CLUS_3                            8                             48
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(XP11.22) MUTATED        6      9      3
  DEL PEAK 21(XP11.22) WILD-TYPE     59     56     64
D27V5, multiclass
        clus
vv       DEL PEAK 21(XP11.22) MUTATED DEL PEAK 21(XP11.22) WILD-TYPE
  CLUS_1                            6                             59
  CLUS_2                            9                             56
  CLUS_3                            3                             64
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(XP11.22) MUTATED        6      7      5
  DEL PEAK 21(XP11.22) WILD-TYPE     23     71     85
D27V6, multiclass
        clus
vv       DEL PEAK 21(XP11.22) MUTATED DEL PEAK 21(XP11.22) WILD-TYPE
  CLUS_1                            6                             23
  CLUS_2                            7                             71
  CLUS_3                            5                             85
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(XP11.22) MUTATED        6      9      3
  DEL PEAK 21(XP11.22) WILD-TYPE     51     62     66
D27V7, multiclass
        clus
vv       DEL PEAK 21(XP11.22) MUTATED DEL PEAK 21(XP11.22) WILD-TYPE
  CLUS_1                            6                             51
  CLUS_2                            9                             62
  CLUS_3                            3                             66
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(XP11.22) MUTATED        7      5      6
  DEL PEAK 21(XP11.22) WILD-TYPE     68     94     17
D27V8, multiclass
        clus
vv       DEL PEAK 21(XP11.22) MUTATED DEL PEAK 21(XP11.22) WILD-TYPE
  CLUS_1                            7                             68
  CLUS_2                            5                             94
  CLUS_3                            6                             17

Clustering(28) Variable = DEL PEAK 22(XQ28) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 22(XQ28) MUTATED        5      0     11      0      1
  DEL PEAK 22(XQ28) WILD-TYPE     66     40     26     21     27
D28V1, multiclass
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 22(XQ28) MUTATED        1      9      2      3      0
  DEL PEAK 22(XQ28) WILD-TYPE     37     15     31     45     38
D28V2, multiclass
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(XQ28) MUTATED        2     13      2      0
  DEL PEAK 22(XQ28) WILD-TYPE     37     54     57     32
D28V3, multiclass
        clus
vv       DEL PEAK 22(XQ28) MUTATED DEL PEAK 22(XQ28) WILD-TYPE
  CLUS_1                         2                          37
  CLUS_2                        13                          54
  CLUS_3                         2                          57
  CLUS_4                         0                          32
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(XQ28) MUTATED        3      8      6
  DEL PEAK 22(XQ28) WILD-TYPE     67     63     50
D28V4, multiclass
        clus
vv       DEL PEAK 22(XQ28) MUTATED DEL PEAK 22(XQ28) WILD-TYPE
  CLUS_1                         3                          67
  CLUS_2                         8                          63
  CLUS_3                         6                          50
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(XQ28) MUTATED        4      9      4
  DEL PEAK 22(XQ28) WILD-TYPE     61     56     63
D28V5, multiclass
        clus
vv       DEL PEAK 22(XQ28) MUTATED DEL PEAK 22(XQ28) WILD-TYPE
  CLUS_1                         4                          61
  CLUS_2                         9                          56
  CLUS_3                         4                          63
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(XQ28) MUTATED        4      7      6
  DEL PEAK 22(XQ28) WILD-TYPE     25     71     84
D28V6, multiclass
        clus
vv       DEL PEAK 22(XQ28) MUTATED DEL PEAK 22(XQ28) WILD-TYPE
  CLUS_1                         4                          25
  CLUS_2                         7                          71
  CLUS_3                         6                          84
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(XQ28) MUTATED        4      9      4
  DEL PEAK 22(XQ28) WILD-TYPE     53     62     65
D28V7, multiclass
        clus
vv       DEL PEAK 22(XQ28) MUTATED DEL PEAK 22(XQ28) WILD-TYPE
  CLUS_1                         4                          53
  CLUS_2                         9                          62
  CLUS_3                         4                          65
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(XQ28) MUTATED        6      6      5
  DEL PEAK 22(XQ28) WILD-TYPE     69     93     18
D28V8, multiclass
        clus
vv       DEL PEAK 22(XQ28) MUTATED DEL PEAK 22(XQ28) WILD-TYPE
  CLUS_1                         6                          69
  CLUS_2                         6                          93
  CLUS_3                         5                          18
> q(save="no")
