
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/13/Correlate_Genomic_Events.R")
> result <- main("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/13/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-tTRUE", "-iD=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/LUSC-TP/8312479/transformed.cor.cli.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/LUSC-TP/8312262/LUSC-TP.transferedmergedcluster.txt", "-fF=", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=0.05", "-cQ=0.25", "-MF=ONLYSIG", "-oT=LUSC-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=LUSC-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/LUSC-TP/8312262/LUSC-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/LUSC-TP/8312479/transformed.cor.cli.txt"

nPatients in clinical file=493, in cluster file=490, common to both=490
[1]  80 490
[1] "AMP PEAK  1(1Q21.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE 
                          253                           237 
  AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE 
                          253                           237 
[1] "AMP PEAK  2(2P16.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE 
                          271                           219 
  AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE 
                          271                           219 
[1] "AMP PEAK  3(2Q31.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE 
                          168                           322 
  AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE 
                          168                           322 
[1] "AMP PEAK  4(3P11.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE 
                           96                           394 
  AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE 
                           96                           394 
[1] "AMP PEAK  5(3Q26.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE 
                           442                             48 
  AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE 
                           442                             48 
[1] "AMP PEAK  6(4Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE 
                        114                         376 
  AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE 
                        114                         376 
[1] "AMP PEAK  7(5P15.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE 
                           378                            112 
  AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE 
                           378                            112 
[1] "AMP PEAK  8(5P12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE 
                        346                         144 
  AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE 
                        346                         144 
[1] "AMP PEAK  9(6P12.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE 
                          162                           328 
  AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE 
                          162                           328 
[1] "AMP PEAK 10(6Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE 
                        147                         343 
  AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE 
                        147                         343 
[1] "AMP PEAK 11(7P11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE 
                          249                           241 
  AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE 
                          249                           241 
[1] "AMP PEAK 12(7Q21.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE 
                          258                           232 
  AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE 
                          258                           232 
[1] "AMP PEAK 13(8P11.23) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE 
                           232                            258 
  AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE 
                           232                            258 
[1] "AMP PEAK 14(8Q24.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE 
                           342                            148 
  AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE 
                           342                            148 
[1] "AMP PEAK 15(9P13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE 
                          134                           356 
  AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE 
                          134                           356 
[1] "AMP PEAK 16(11Q13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE 
                           181                            309 
  AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE 
                           181                            309 
[1] "AMP PEAK 17(12P13.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE 
                            249                             241 
  AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE 
                            249                             241 
[1] "AMP PEAK 18(12Q15) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE 
                         178                          312 
  AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE 
                         178                          312 
[1] "AMP PEAK 19(13Q34) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE 
                          88                          402 
  AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE 
                          88                          402 
[1] "AMP PEAK 20(14Q13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE 
                           154                            336 
  AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE 
                           154                            336 
[1] "AMP PEAK 21(15Q26.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE 
                           176                            314 
  AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE 
                           176                            314 
[1] "AMP PEAK 22(17Q25.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE 
                           233                            257 
  AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE 
                           233                            257 
[1] "AMP PEAK 23(18P11.32) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE 
                            175                             315 
  AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE 
                            175                             315 
[1] "AMP PEAK 24(18Q11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE 
                           148                            342 
  AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE 
                           148                            342 
[1] "AMP PEAK 25(19Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE 
                         218                          272 
  AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE 
                         218                          272 
[1] "AMP PEAK 26(19Q13.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE 
                           229                            261 
  AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE 
                           229                            261 
[1] "AMP PEAK 27(20P12.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE 
                           273                            217 
  AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE 
                           273                            217 
[1] "AMP PEAK 28(20Q11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE 
                            298                             192 
  AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE 
                            298                             192 
[1] "AMP PEAK 29(22Q11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE 
                            253                             237 
  AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE 
                            253                             237 
[1] "AMP PEAK 30(XQ28) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE 
                        122                         368 
  AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE 
                        122                         368 
[1] "DEL PEAK  1(1P36.32) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE 
                           213                            277 
  DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE 
                           213                            277 
[1] "DEL PEAK  2(1P13.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE 
                          212                           278 
  DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE 
                          212                           278 
[1] "DEL PEAK  3(2P25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE 
                           50                           440 
  DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE 
                           50                           440 
[1] "DEL PEAK  4(2Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE 
                          124                           366 
  DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE 
                          124                           366 
[1] "DEL PEAK  5(2Q37.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE 
                          155                           335 
  DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE 
                          155                           335 
[1] "DEL PEAK  6(3P25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE 
                          389                           101 
  DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE 
                          389                           101 
[1] "DEL PEAK  7(3P13) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE 
                        424                          66 
  DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE 
                        424                          66 
[1] "DEL PEAK  8(3P12.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE 
                          413                            77 
  DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE 
                          413                            77 
[1] "DEL PEAK  9(3Q11.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE 
                           77                           413 
  DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE 
                           77                           413 
[1] "DEL PEAK 10(4P15.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE 
                          307                           183 
  DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE 
                          307                           183 
[1] "DEL PEAK 11(4Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE 
                          278                           212 
  DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE 
                          278                           212 
[1] "DEL PEAK 12(4Q32.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE 
                          322                           168 
  DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE 
                          322                           168 
[1] "DEL PEAK 13(4Q35.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE 
                          323                           167 
  DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE 
                          323                           167 
[1] "DEL PEAK 14(5Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE 
                          360                           130 
  DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE 
                          360                           130 
[1] "DEL PEAK 15(6P25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE 
                          128                           362 
  DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE 
                          128                           362 
[1] "DEL PEAK 16(6Q22.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE 
                           118                            372 
  DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE 
                           118                            372 
[1] "DEL PEAK 17(6Q26) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE 
                        130                         360 
  DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE 
                        130                         360 
[1] "DEL PEAK 18(7Q11.22) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE 
                            47                            443 
  DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE 
                            47                            443 
[1] "DEL PEAK 19(7Q36.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE 
                          103                           387 
  DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE 
                          103                           387 
[1] "DEL PEAK 20(8P23.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE 
                          335                           155 
  DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE 
                          335                           155 
[1] "DEL PEAK 21(9P23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE 
                        323                         167 
  DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE 
                        323                         167 
[1] "DEL PEAK 22(9P21.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE 
                          378                           112 
  DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE 
                          378                           112 
[1] "DEL PEAK 23(9Q21.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE 
                           248                            242 
  DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE 
                           248                            242 
[1] "DEL PEAK 24(10P15.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE 
                           222                            268 
  DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE 
                           222                            268 
[1] "DEL PEAK 25(10P15.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE 
                           210                            280 
  DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE 
                           210                            280 
[1] "DEL PEAK 26(10Q23.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE 
                            259                             231 
  DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE 
                            259                             231 
[1] "DEL PEAK 27(11P15.5) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE 
                           239                            251 
  DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE 
                           239                            251 
[1] "DEL PEAK 28(11Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE 
                           158                            332 
  DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE 
                           158                            332 
[1] "DEL PEAK 29(11Q25) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE 
                         182                          308 
  DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE 
                         182                          308 
[1] "DEL PEAK 30(12Q24.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE 
                             85                             405 
  DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE 
                             85                             405 
[1] "DEL PEAK 31(13Q12.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE 
                            326                             164 
  DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE 
                            326                             164 
[1] "DEL PEAK 32(13Q14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE 
                           337                            153 
  DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE 
                           337                            153 
[1] "DEL PEAK 33(14Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE 
                           171                            319 
  DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE 
                           171                            319 
[1] "DEL PEAK 34(15Q12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE 
                         169                          321 
  DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE 
                         169                          321 
[1] "DEL PEAK 35(15Q21.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE 
                           162                            328 
  DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE 
                           162                            328 
[1] "DEL PEAK 36(16P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE 
                           181                            309 
  DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE 
                           181                            309 
[1] "DEL PEAK 37(16Q23.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE 
                           204                            286 
  DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE 
                           204                            286 
[1] "DEL PEAK 38(17Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE 
                           128                            362 
  DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE 
                           128                            362 
[1] "DEL PEAK 39(17Q25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE 
                           100                            390 
  DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE 
                           100                            390 
[1] "DEL PEAK 40(18Q23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE 
                         227                          263 
  DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE 
                         227                          263 
[1] "DEL PEAK 41(19P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE 
                           229                            261 
  DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE 
                           229                            261 
[1] "DEL PEAK 42(19Q13.32) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE 
                            143                             347 
  DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE 
                            143                             347 
[1] "DEL PEAK 43(21Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE 
                           241                            249 
  DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE 
                           241                            249 
[1] "DEL PEAK 44(21Q22.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE 
                           276                            214 
  DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE 
                           276                            214 
[1] "DEL PEAK 45(22Q11.21) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE 
                             92                             398 
  DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE 
                             92                             398 
[1] "DEL PEAK 46(22Q13.32) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE 
                            125                             365 
  DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE 
                            125                             365 
[1] "DEL PEAK 47(XP22.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE 
                          151                           339 
  DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE 
                          151                           339 
[1] "DEL PEAK 48(XP21.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE 
                          149                           341 
  DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE 
                          149                           341 
[1] "DEL PEAK 49(XP11.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE 
                          145                           345 
  DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE 
                          145                           345 
[1] "DEL PEAK 50(XQ22.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE 
                          110                           380 
  DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE 
                          110                           380 
[1] "terrence_modification_tag"
[1] TRUE
[1] "data2feature, selection="
 [1] "MRNA_CNMF"                   "MRNA_CHIERARCHICAL"         
 [3] "CN_CNMF"                     "METHLYATION_CNMF"           
 [5] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [7] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [9] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[11] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 12 rows and 490 columns.

Variable 1:'MRNA_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'MRNA_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'RPPA_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'RPPA_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MRNASEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MIRSEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 11:'MIRSEQ_MATURE_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 12:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
 [1] "MRNA_CNMF"                   "MRNA_CHIERARCHICAL"         
 [3] "CN_CNMF"                     "METHLYATION_CNMF"           
 [5] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [7] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [9] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[11] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 490 columns, 0 survival variables, and 12 non-survival variables.
MRNA_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNA_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=2, binary=FALSE, numeric=FALSE

Clustering(1) Variable = AMP PEAK  1(1Q21.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1Q21.2) MUTATED       18     37     16     16
  AMP PEAK  1(1Q21.2) WILD-TYPE     24     15     16     12
D1V1, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          18                            24
  CLUS_2                          37                            15
  CLUS_3                          16                            16
  CLUS_4                          16                            12
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1Q21.2) MUTATED       14     38     13     22
  AMP PEAK  1(1Q21.2) WILD-TYPE      8     18     10     31
D1V2, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          14                             8
  CLUS_2                          38                            18
  CLUS_3                          13                            10
  CLUS_4                          22                            31
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q21.2) MUTATED       79    120     54
  AMP PEAK  1(1Q21.2) WILD-TYPE    114     42     81
D1V3, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          79                           114
  CLUS_2                         120                            42
  CLUS_3                          54                            81
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q21.2) MUTATED       50     78     51
  AMP PEAK  1(1Q21.2) WILD-TYPE     92     36     49
D1V4, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          50                            92
  CLUS_2                          78                            36
  CLUS_3                          51                            49
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q21.2) MUTATED       37     36     28
  AMP PEAK  1(1Q21.2) WILD-TYPE     23     37     33
D1V5, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          37                            23
  CLUS_2                          36                            37
  CLUS_3                          28                            33
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1Q21.2) MUTATED       39     21     26     15
  AMP PEAK  1(1Q21.2) WILD-TYPE     19     26     23     25
D1V6, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          39                            19
  CLUS_2                          21                            26
  CLUS_3                          26                            23
  CLUS_4                          15                            25
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1Q21.2) MUTATED       42    102     80     28
  AMP PEAK  1(1Q21.2) WILD-TYPE     68     43     73     50
D1V7, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          42                            68
  CLUS_2                         102                            43
  CLUS_3                          80                            73
  CLUS_4                          28                            50
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q21.2) MUTATED       80    117     55
  AMP PEAK  1(1Q21.2) WILD-TYPE    135     59     40
D1V8, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          80                           135
  CLUS_2                         117                            59
  CLUS_3                          55                            40
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1Q21.2) MUTATED       78     70     48     43
  AMP PEAK  1(1Q21.2) WILD-TYPE     67     60     77     21
D1V9, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          78                            67
  CLUS_2                          70                            60
  CLUS_3                          48                            77
  CLUS_4                          43                            21
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q21.2) MUTATED       52     71    116
  AMP PEAK  1(1Q21.2) WILD-TYPE     19     92    114
D1V10, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          52                            19
  CLUS_2                          71                            92
  CLUS_3                         116                           114
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q21.2) MUTATED       75     49     39
  AMP PEAK  1(1Q21.2) WILD-TYPE     50     63     52
D1V11, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          75                            50
  CLUS_2                          49                            63
  CLUS_3                          39                            52
D1V12, binary
                               cls
clus                              0   1
  AMP PEAK  1(1Q21.2) MUTATED    77  86
  AMP PEAK  1(1Q21.2) WILD-TYPE 101  64
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  1(1Q21.2) MUTATED     77   86
  AMP PEAK  1(1Q21.2) WILD-TYPE  101   64
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          77                           101
  CLUS_2                          86                            64

Clustering(2) Variable = AMP PEAK  2(2P16.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(2P16.1) MUTATED       19     40     13     13
  AMP PEAK  2(2P16.1) WILD-TYPE     23     12     19     15
D2V1, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          19                            23
  CLUS_2                          40                            12
  CLUS_3                          13                            19
  CLUS_4                          13                            15
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(2P16.1) MUTATED        7     42     15     21
  AMP PEAK  2(2P16.1) WILD-TYPE     15     14      8     32
D2V2, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                           7                            15
  CLUS_2                          42                            14
  CLUS_3                          15                             8
  CLUS_4                          21                            32
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P16.1) MUTATED       70    127     74
  AMP PEAK  2(2P16.1) WILD-TYPE    123     35     61
D2V3, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          70                           123
  CLUS_2                         127                            35
  CLUS_3                          74                            61
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P16.1) MUTATED       61     85     54
  AMP PEAK  2(2P16.1) WILD-TYPE     81     29     46
D2V4, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          61                            81
  CLUS_2                          85                            29
  CLUS_3                          54                            46
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P16.1) MUTATED       33     38     33
  AMP PEAK  2(2P16.1) WILD-TYPE     27     35     28
D2V5, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          33                            27
  CLUS_2                          38                            35
  CLUS_3                          33                            28
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(2P16.1) MUTATED       31     28     28     17
  AMP PEAK  2(2P16.1) WILD-TYPE     27     19     21     23
D2V6, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          31                            27
  CLUS_2                          28                            19
  CLUS_3                          28                            21
  CLUS_4                          17                            23
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(2P16.1) MUTATED       44    109     91     25
  AMP PEAK  2(2P16.1) WILD-TYPE     66     36     62     53
D2V7, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          44                            66
  CLUS_2                         109                            36
  CLUS_3                          91                            62
  CLUS_4                          25                            53
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P16.1) MUTATED       89    125     55
  AMP PEAK  2(2P16.1) WILD-TYPE    126     51     40
D2V8, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          89                           126
  CLUS_2                         125                            51
  CLUS_3                          55                            40
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(2P16.1) MUTATED       81     90     49     39
  AMP PEAK  2(2P16.1) WILD-TYPE     64     40     76     25
D2V9, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          81                            64
  CLUS_2                          90                            40
  CLUS_3                          49                            76
  CLUS_4                          39                            25
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P16.1) MUTATED       46    105    108
  AMP PEAK  2(2P16.1) WILD-TYPE     25     58    122
D2V10, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          46                            25
  CLUS_2                         105                            58
  CLUS_3                         108                           122
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P16.1) MUTATED       84     58     40
  AMP PEAK  2(2P16.1) WILD-TYPE     41     54     51
D2V11, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          84                            41
  CLUS_2                          58                            54
  CLUS_3                          40                            51
D2V12, binary
                               cls
clus                              0   1
  AMP PEAK  2(2P16.1) MUTATED    82 100
  AMP PEAK  2(2P16.1) WILD-TYPE  96  50
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  2(2P16.1) MUTATED     82  100
  AMP PEAK  2(2P16.1) WILD-TYPE   96   50
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          82                            96
  CLUS_2                         100                            50

Clustering(3) Variable = AMP PEAK  3(2Q31.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(2Q31.2) MUTATED       10     27      8     10
  AMP PEAK  3(2Q31.2) WILD-TYPE     32     25     24     18
D3V1, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          10                            32
  CLUS_2                          27                            25
  CLUS_3                           8                            24
  CLUS_4                          10                            18
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(2Q31.2) MUTATED        8     28      7     12
  AMP PEAK  3(2Q31.2) WILD-TYPE     14     28     16     41
D3V2, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                           8                            14
  CLUS_2                          28                            28
  CLUS_3                           7                            16
  CLUS_4                          12                            41
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q31.2) MUTATED       42     80     46
  AMP PEAK  3(2Q31.2) WILD-TYPE    151     82     89
D3V3, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          42                           151
  CLUS_2                          80                            82
  CLUS_3                          46                            89
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q31.2) MUTATED       36     62     29
  AMP PEAK  3(2Q31.2) WILD-TYPE    106     52     71
D3V4, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          36                           106
  CLUS_2                          62                            52
  CLUS_3                          29                            71
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q31.2) MUTATED       22     22     21
  AMP PEAK  3(2Q31.2) WILD-TYPE     38     51     40
D3V5, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          22                            38
  CLUS_2                          22                            51
  CLUS_3                          21                            40
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(2Q31.2) MUTATED       17     20     16     12
  AMP PEAK  3(2Q31.2) WILD-TYPE     41     27     33     28
D3V6, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          17                            41
  CLUS_2                          20                            27
  CLUS_3                          16                            33
  CLUS_4                          12                            28
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(2Q31.2) MUTATED       27     75     48     17
  AMP PEAK  3(2Q31.2) WILD-TYPE     83     70    105     61
D3V7, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          27                            83
  CLUS_2                          75                            70
  CLUS_3                          48                           105
  CLUS_4                          17                            61
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q31.2) MUTATED       53     82     32
  AMP PEAK  3(2Q31.2) WILD-TYPE    162     94     63
D3V8, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          53                           162
  CLUS_2                          82                            94
  CLUS_3                          32                            63
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(2Q31.2) MUTATED       54     53     29     24
  AMP PEAK  3(2Q31.2) WILD-TYPE     91     77     96     40
D3V9, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          54                            91
  CLUS_2                          53                            77
  CLUS_3                          29                            96
  CLUS_4                          24                            40
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q31.2) MUTATED       26     59     75
  AMP PEAK  3(2Q31.2) WILD-TYPE     45    104    155
D3V10, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          26                            45
  CLUS_2                          59                           104
  CLUS_3                          75                           155
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q31.2) MUTATED       59     28     22
  AMP PEAK  3(2Q31.2) WILD-TYPE     66     84     69
D3V11, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          59                            66
  CLUS_2                          28                            84
  CLUS_3                          22                            69
D3V12, binary
                               cls
clus                              0   1
  AMP PEAK  3(2Q31.2) MUTATED    44  65
  AMP PEAK  3(2Q31.2) WILD-TYPE 134  85
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  3(2Q31.2) MUTATED     44   65
  AMP PEAK  3(2Q31.2) WILD-TYPE  134   85
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          44                           134
  CLUS_2                          65                            85

Clustering(4) Variable = AMP PEAK  4(3P11.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3P11.1) MUTATED       14     11      3      6
  AMP PEAK  4(3P11.1) WILD-TYPE     28     41     29     22
D4V1, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                          14                            28
  CLUS_2                          11                            41
  CLUS_3                           3                            29
  CLUS_4                           6                            22
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3P11.1) MUTATED        4     12      4     14
  AMP PEAK  4(3P11.1) WILD-TYPE     18     44     19     39
D4V2, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                           4                            18
  CLUS_2                          12                            44
  CLUS_3                           4                            19
  CLUS_4                          14                            39
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3P11.1) MUTATED       34     32     30
  AMP PEAK  4(3P11.1) WILD-TYPE    159    130    105
D4V3, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                          34                           159
  CLUS_2                          32                           130
  CLUS_3                          30                           105
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3P11.1) MUTATED       26     23     17
  AMP PEAK  4(3P11.1) WILD-TYPE    116     91     83
D4V4, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                          26                           116
  CLUS_2                          23                            91
  CLUS_3                          17                            83
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3P11.1) MUTATED        9     18     10
  AMP PEAK  4(3P11.1) WILD-TYPE     51     55     51
D4V5, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                           9                            51
  CLUS_2                          18                            55
  CLUS_3                          10                            51
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3P11.1) MUTATED        4     12     17      4
  AMP PEAK  4(3P11.1) WILD-TYPE     54     35     32     36
D4V6, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                           4                            54
  CLUS_2                          12                            35
  CLUS_3                          17                            32
  CLUS_4                           4                            36
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3P11.1) MUTATED       25     29     33      9
  AMP PEAK  4(3P11.1) WILD-TYPE     85    116    120     69
D4V7, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                          25                            85
  CLUS_2                          29                           116
  CLUS_3                          33                           120
  CLUS_4                           9                            69
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3P11.1) MUTATED       41     35     20
  AMP PEAK  4(3P11.1) WILD-TYPE    174    141     75
D4V8, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                          41                           174
  CLUS_2                          35                           141
  CLUS_3                          20                            75
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3P11.1) MUTATED       33     30     17     10
  AMP PEAK  4(3P11.1) WILD-TYPE    112    100    108     54
D4V9, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                          33                           112
  CLUS_2                          30                           100
  CLUS_3                          17                           108
  CLUS_4                          10                            54
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3P11.1) MUTATED       13     35     42
  AMP PEAK  4(3P11.1) WILD-TYPE     58    128    188
D4V10, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                          13                            58
  CLUS_2                          35                           128
  CLUS_3                          42                           188
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3P11.1) MUTATED       22     23     15
  AMP PEAK  4(3P11.1) WILD-TYPE    103     89     76
D4V11, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                          22                           103
  CLUS_2                          23                            89
  CLUS_3                          15                            76
D4V12, binary
                               cls
clus                              0   1
  AMP PEAK  4(3P11.1) MUTATED    27  33
  AMP PEAK  4(3P11.1) WILD-TYPE 151 117
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  4(3P11.1) MUTATED     27   33
  AMP PEAK  4(3P11.1) WILD-TYPE  151  117
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                          27                           151
  CLUS_2                          33                           117

Clustering(5) Variable = AMP PEAK  5(3Q26.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(3Q26.33) MUTATED       40     52     25     23
  AMP PEAK  5(3Q26.33) WILD-TYPE      2      0      7      5
D5V1, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                           40                              2
  CLUS_2                           52                              0
  CLUS_3                           25                              7
  CLUS_4                           23                              5
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(3Q26.33) MUTATED       14     56     20     50
  AMP PEAK  5(3Q26.33) WILD-TYPE      8      0      3      3
D5V2, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                           14                              8
  CLUS_2                           56                              0
  CLUS_3                           20                              3
  CLUS_4                           50                              3
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3Q26.33) MUTATED      150    162    130
  AMP PEAK  5(3Q26.33) WILD-TYPE     43      0      5
D5V3, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                          150                             43
  CLUS_2                          162                              0
  CLUS_3                          130                              5
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3Q26.33) MUTATED      112    114     94
  AMP PEAK  5(3Q26.33) WILD-TYPE     30      0      6
D5V4, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                          112                             30
  CLUS_2                          114                              0
  CLUS_3                           94                              6
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3Q26.33) MUTATED       55     67     51
  AMP PEAK  5(3Q26.33) WILD-TYPE      5      6     10
D5V5, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                           55                              5
  CLUS_2                           67                              6
  CLUS_3                           51                             10
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(3Q26.33) MUTATED       51     44     47     31
  AMP PEAK  5(3Q26.33) WILD-TYPE      7      3      2      9
D5V6, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                           51                              7
  CLUS_2                           44                              3
  CLUS_3                           47                              2
  CLUS_4                           31                              9
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(3Q26.33) MUTATED      104    145    132     58
  AMP PEAK  5(3Q26.33) WILD-TYPE      6      0     21     20
D5V7, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                          104                              6
  CLUS_2                          145                              0
  CLUS_3                          132                             21
  CLUS_4                           58                             20
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3Q26.33) MUTATED      178    175     86
  AMP PEAK  5(3Q26.33) WILD-TYPE     37      1      9
D5V8, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                          178                             37
  CLUS_2                          175                              1
  CLUS_3                           86                              9
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(3Q26.33) MUTATED      131    128     97     63
  AMP PEAK  5(3Q26.33) WILD-TYPE     14      2     28      1
D5V9, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                          131                             14
  CLUS_2                          128                              2
  CLUS_3                           97                             28
  CLUS_4                           63                              1
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3Q26.33) MUTATED       71    155    193
  AMP PEAK  5(3Q26.33) WILD-TYPE      0      8     37
D5V10, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                           71                              0
  CLUS_2                          155                              8
  CLUS_3                          193                             37
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3Q26.33) MUTATED      120    100     75
  AMP PEAK  5(3Q26.33) WILD-TYPE      5     12     16
D5V11, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                          120                              5
  CLUS_2                          100                             12
  CLUS_3                           75                             16
D5V12, binary
                                cls
clus                               0   1
  AMP PEAK  5(3Q26.33) MUTATED   150 145
  AMP PEAK  5(3Q26.33) WILD-TYPE  28   5
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  5(3Q26.33) MUTATED    150  145
  AMP PEAK  5(3Q26.33) WILD-TYPE   28    5
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                          150                             28
  CLUS_2                          145                              5

Clustering(6) Variable = AMP PEAK  6(4Q12) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(4Q12) MUTATED       12     17      8      9
  AMP PEAK  6(4Q12) WILD-TYPE     30     35     24     19
D6V1, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        12                          30
  CLUS_2                        17                          35
  CLUS_3                         8                          24
  CLUS_4                         9                          19
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(4Q12) MUTATED        5     17     11     13
  AMP PEAK  6(4Q12) WILD-TYPE     17     39     12     40
D6V2, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                         5                          17
  CLUS_2                        17                          39
  CLUS_3                        11                          12
  CLUS_4                        13                          40
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(4Q12) MUTATED       28     41     45
  AMP PEAK  6(4Q12) WILD-TYPE    165    121     90
D6V3, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        28                         165
  CLUS_2                        41                         121
  CLUS_3                        45                          90
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(4Q12) MUTATED       21     29     24
  AMP PEAK  6(4Q12) WILD-TYPE    121     85     76
D6V4, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        21                         121
  CLUS_2                        29                          85
  CLUS_3                        24                          76
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(4Q12) MUTATED       13     19      9
  AMP PEAK  6(4Q12) WILD-TYPE     47     54     52
D6V5, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        13                          47
  CLUS_2                        19                          54
  CLUS_3                         9                          52
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(4Q12) MUTATED        9      9     17      6
  AMP PEAK  6(4Q12) WILD-TYPE     49     38     32     34
D6V6, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                         9                          49
  CLUS_2                         9                          38
  CLUS_3                        17                          32
  CLUS_4                         6                          34
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(4Q12) MUTATED       25     35     42     10
  AMP PEAK  6(4Q12) WILD-TYPE     85    110    111     68
D6V7, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        25                          85
  CLUS_2                        35                         110
  CLUS_3                        42                         111
  CLUS_4                        10                          68
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(4Q12) MUTATED       40     44     28
  AMP PEAK  6(4Q12) WILD-TYPE    175    132     67
D6V8, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        40                         175
  CLUS_2                        44                         132
  CLUS_3                        28                          67
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(4Q12) MUTATED       40     39     20      7
  AMP PEAK  6(4Q12) WILD-TYPE    105     91    105     57
D6V9, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        40                         105
  CLUS_2                        39                          91
  CLUS_3                        20                         105
  CLUS_4                         7                          57
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(4Q12) MUTATED       13     40     53
  AMP PEAK  6(4Q12) WILD-TYPE     58    123    177
D6V10, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        13                          58
  CLUS_2                        40                         123
  CLUS_3                        53                         177
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(4Q12) MUTATED       32     24     11
  AMP PEAK  6(4Q12) WILD-TYPE     93     88     80
D6V11, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        32                          93
  CLUS_2                        24                          88
  CLUS_3                        11                          80
D6V12, binary
                             cls
clus                            0   1
  AMP PEAK  6(4Q12) MUTATED    36  31
  AMP PEAK  6(4Q12) WILD-TYPE 142 119
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK  6(4Q12) MUTATED     36   31
  AMP PEAK  6(4Q12) WILD-TYPE  142  119
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        36                         142
  CLUS_2                        31                         119

Clustering(7) Variable = AMP PEAK  7(5P15.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P15.33) MUTATED       35     41     25     21
  AMP PEAK  7(5P15.33) WILD-TYPE      7     11      7      7
D7V1, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           35                              7
  CLUS_2                           41                             11
  CLUS_3                           25                              7
  CLUS_4                           21                              7
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P15.33) MUTATED       17     44     19     42
  AMP PEAK  7(5P15.33) WILD-TYPE      5     12      4     11
D7V2, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           17                              5
  CLUS_2                           44                             12
  CLUS_3                           19                              4
  CLUS_4                           42                             11
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P15.33) MUTATED      134    115    129
  AMP PEAK  7(5P15.33) WILD-TYPE     59     47      6
D7V3, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                          134                             59
  CLUS_2                          115                             47
  CLUS_3                          129                              6
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P15.33) MUTATED      105     83     86
  AMP PEAK  7(5P15.33) WILD-TYPE     37     31     14
D7V4, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                          105                             37
  CLUS_2                           83                             31
  CLUS_3                           86                             14
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P15.33) MUTATED       44     57     51
  AMP PEAK  7(5P15.33) WILD-TYPE     16     16     10
D7V5, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           44                             16
  CLUS_2                           57                             16
  CLUS_3                           51                             10
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P15.33) MUTATED       44     40     39     29
  AMP PEAK  7(5P15.33) WILD-TYPE     14      7     10     11
D7V6, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           44                             14
  CLUS_2                           40                              7
  CLUS_3                           39                             10
  CLUS_4                           29                             11
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P15.33) MUTATED       84    108    124     59
  AMP PEAK  7(5P15.33) WILD-TYPE     26     37     29     19
D7V7, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           84                             26
  CLUS_2                          108                             37
  CLUS_3                          124                             29
  CLUS_4                           59                             19
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P15.33) MUTATED      174    125     76
  AMP PEAK  7(5P15.33) WILD-TYPE     41     51     19
D7V8, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                          174                             41
  CLUS_2                          125                             51
  CLUS_3                           76                             19
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P15.33) MUTATED      115    102     95     46
  AMP PEAK  7(5P15.33) WILD-TYPE     30     28     30     18
D7V9, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                          115                             30
  CLUS_2                          102                             28
  CLUS_3                           95                             30
  CLUS_4                           46                             18
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P15.33) MUTATED       52    137    169
  AMP PEAK  7(5P15.33) WILD-TYPE     19     26     61
D7V10, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           52                             19
  CLUS_2                          137                             26
  CLUS_3                          169                             61
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P15.33) MUTATED       98     89     65
  AMP PEAK  7(5P15.33) WILD-TYPE     27     23     26
D7V11, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           98                             27
  CLUS_2                           89                             23
  CLUS_3                           65                             26
D7V12, binary
                                cls
clus                               0   1
  AMP PEAK  7(5P15.33) MUTATED   140 112
  AMP PEAK  7(5P15.33) WILD-TYPE  38  38
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  7(5P15.33) MUTATED    140  112
  AMP PEAK  7(5P15.33) WILD-TYPE   38   38
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                          140                             38
  CLUS_2                          112                             38

Clustering(8) Variable = AMP PEAK  8(5P12) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(5P12) MUTATED       32     39     23     20
  AMP PEAK  8(5P12) WILD-TYPE     10     13      9      8
D8V1, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                        32                          10
  CLUS_2                        39                          13
  CLUS_3                        23                           9
  CLUS_4                        20                           8
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(5P12) MUTATED       16     42     17     39
  AMP PEAK  8(5P12) WILD-TYPE      6     14      6     14
D8V2, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                        16                           6
  CLUS_2                        42                          14
  CLUS_3                        17                           6
  CLUS_4                        39                          14
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P12) MUTATED      114    111    121
  AMP PEAK  8(5P12) WILD-TYPE     79     51     14
D8V3, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                       114                          79
  CLUS_2                       111                          51
  CLUS_3                       121                          14
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P12) MUTATED       90     78     81
  AMP PEAK  8(5P12) WILD-TYPE     52     36     19
D8V4, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                        90                          52
  CLUS_2                        78                          36
  CLUS_3                        81                          19
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P12) MUTATED       40     51     49
  AMP PEAK  8(5P12) WILD-TYPE     20     22     12
D8V5, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                        40                          20
  CLUS_2                        51                          22
  CLUS_3                        49                          12
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(5P12) MUTATED       42     34     36     28
  AMP PEAK  8(5P12) WILD-TYPE     16     13     13     12
D8V6, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                        42                          16
  CLUS_2                        34                          13
  CLUS_3                        36                          13
  CLUS_4                        28                          12
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(5P12) MUTATED       72    104    115     52
  AMP PEAK  8(5P12) WILD-TYPE     38     41     38     26
D8V7, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                        72                          38
  CLUS_2                       104                          41
  CLUS_3                       115                          38
  CLUS_4                        52                          26
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P12) MUTATED      154    120     69
  AMP PEAK  8(5P12) WILD-TYPE     61     56     26
D8V8, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                       154                          61
  CLUS_2                       120                          56
  CLUS_3                        69                          26
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(5P12) MUTATED      105     90     89     45
  AMP PEAK  8(5P12) WILD-TYPE     40     40     36     19
D8V9, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                       105                          40
  CLUS_2                        90                          40
  CLUS_3                        89                          36
  CLUS_4                        45                          19
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P12) MUTATED       51    124    154
  AMP PEAK  8(5P12) WILD-TYPE     20     39     76
D8V10, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                        51                          20
  CLUS_2                       124                          39
  CLUS_3                       154                          76
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P12) MUTATED       90     76     61
  AMP PEAK  8(5P12) WILD-TYPE     35     36     30
D8V11, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                        90                          35
  CLUS_2                        76                          36
  CLUS_3                        61                          30
D8V12, binary
                             cls
clus                            0   1
  AMP PEAK  8(5P12) MUTATED   124 103
  AMP PEAK  8(5P12) WILD-TYPE  54  47
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK  8(5P12) MUTATED    124  103
  AMP PEAK  8(5P12) WILD-TYPE   54   47
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                       124                          54
  CLUS_2                       103                          47

Clustering(9) Variable = AMP PEAK  9(6P12.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6P12.1) MUTATED       12     18     12     12
  AMP PEAK  9(6P12.1) WILD-TYPE     30     34     20     16
D9V1, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          12                            30
  CLUS_2                          18                            34
  CLUS_3                          12                            20
  CLUS_4                          12                            16
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6P12.1) MUTATED       10     19      8     17
  AMP PEAK  9(6P12.1) WILD-TYPE     12     37     15     36
D9V2, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          10                            12
  CLUS_2                          19                            37
  CLUS_3                           8                            15
  CLUS_4                          17                            36
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P12.1) MUTATED       41     66     55
  AMP PEAK  9(6P12.1) WILD-TYPE    152     96     80
D9V3, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          41                           152
  CLUS_2                          66                            96
  CLUS_3                          55                            80
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P12.1) MUTATED       36     45     30
  AMP PEAK  9(6P12.1) WILD-TYPE    106     69     70
D9V4, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          36                           106
  CLUS_2                          45                            69
  CLUS_3                          30                            70
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P12.1) MUTATED       20     25     19
  AMP PEAK  9(6P12.1) WILD-TYPE     40     48     42
D9V5, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          20                            40
  CLUS_2                          25                            48
  CLUS_3                          19                            42
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6P12.1) MUTATED       17     18     20      9
  AMP PEAK  9(6P12.1) WILD-TYPE     41     29     29     31
D9V6, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          17                            41
  CLUS_2                          18                            29
  CLUS_3                          20                            29
  CLUS_4                           9                            31
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6P12.1) MUTATED       21     59     55     25
  AMP PEAK  9(6P12.1) WILD-TYPE     89     86     98     53
D9V7, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          21                            89
  CLUS_2                          59                            86
  CLUS_3                          55                            98
  CLUS_4                          25                            53
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P12.1) MUTATED       60     65     35
  AMP PEAK  9(6P12.1) WILD-TYPE    155    111     60
D9V8, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          60                           155
  CLUS_2                          65                           111
  CLUS_3                          35                            60
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6P12.1) MUTATED       49     46     35     23
  AMP PEAK  9(6P12.1) WILD-TYPE     96     84     90     41
D9V9, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          49                            96
  CLUS_2                          46                            84
  CLUS_3                          35                            90
  CLUS_4                          23                            41
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P12.1) MUTATED       28     57     68
  AMP PEAK  9(6P12.1) WILD-TYPE     43    106    162
D9V10, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          28                            43
  CLUS_2                          57                           106
  CLUS_3                          68                           162
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P12.1) MUTATED       51     27     30
  AMP PEAK  9(6P12.1) WILD-TYPE     74     85     61
D9V11, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          51                            74
  CLUS_2                          27                            85
  CLUS_3                          30                            61
D9V12, binary
                               cls
clus                              0   1
  AMP PEAK  9(6P12.1) MUTATED    46  62
  AMP PEAK  9(6P12.1) WILD-TYPE 132  88
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  9(6P12.1) MUTATED     46   62
  AMP PEAK  9(6P12.1) WILD-TYPE  132   88
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          46                           132
  CLUS_2                          62                            88

Clustering(10) Variable = AMP PEAK 10(6Q12) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6Q12) MUTATED       13     17      8     10
  AMP PEAK 10(6Q12) WILD-TYPE     29     35     24     18
D10V1, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        13                          29
  CLUS_2                        17                          35
  CLUS_3                         8                          24
  CLUS_4                        10                          18
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6Q12) MUTATED        9     18      7     14
  AMP PEAK 10(6Q12) WILD-TYPE     13     38     16     39
D10V2, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                         9                          13
  CLUS_2                        18                          38
  CLUS_3                         7                          16
  CLUS_4                        14                          39
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q12) MUTATED       38     59     50
  AMP PEAK 10(6Q12) WILD-TYPE    155    103     85
D10V3, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        38                         155
  CLUS_2                        59                         103
  CLUS_3                        50                          85
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q12) MUTATED       32     48     23
  AMP PEAK 10(6Q12) WILD-TYPE    110     66     77
D10V4, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        32                         110
  CLUS_2                        48                          66
  CLUS_3                        23                          77
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q12) MUTATED       22     20     18
  AMP PEAK 10(6Q12) WILD-TYPE     38     53     43
D10V5, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        22                          38
  CLUS_2                        20                          53
  CLUS_3                        18                          43
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6Q12) MUTATED       19     17     16      8
  AMP PEAK 10(6Q12) WILD-TYPE     39     30     33     32
D10V6, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        19                          39
  CLUS_2                        17                          30
  CLUS_3                        16                          33
  CLUS_4                         8                          32
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6Q12) MUTATED       19     56     50     20
  AMP PEAK 10(6Q12) WILD-TYPE     91     89    103     58
D10V7, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        19                          91
  CLUS_2                        56                          89
  CLUS_3                        50                         103
  CLUS_4                        20                          58
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q12) MUTATED       47     63     35
  AMP PEAK 10(6Q12) WILD-TYPE    168    113     60
D10V8, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        47                         168
  CLUS_2                        63                         113
  CLUS_3                        35                          60
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6Q12) MUTATED       51     36     32     22
  AMP PEAK 10(6Q12) WILD-TYPE     94     94     93     42
D10V9, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        51                          94
  CLUS_2                        36                          94
  CLUS_3                        32                          93
  CLUS_4                        22                          42
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q12) MUTATED       28     51     62
  AMP PEAK 10(6Q12) WILD-TYPE     43    112    168
D10V10, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        28                          43
  CLUS_2                        51                         112
  CLUS_3                        62                         168
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q12) MUTATED       42     27     29
  AMP PEAK 10(6Q12) WILD-TYPE     83     85     62
D10V11, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        42                          83
  CLUS_2                        27                          85
  CLUS_3                        29                          62
D10V12, binary
                             cls
clus                            0   1
  AMP PEAK 10(6Q12) MUTATED    42  56
  AMP PEAK 10(6Q12) WILD-TYPE 136  94
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK 10(6Q12) MUTATED     42   56
  AMP PEAK 10(6Q12) WILD-TYPE  136   94
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        42                         136
  CLUS_2                        56                          94

Clustering(11) Variable = AMP PEAK 11(7P11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED       21     34     15     11
  AMP PEAK 11(7P11.2) WILD-TYPE     21     18     17     17
D11V1, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          21                            21
  CLUS_2                          34                            18
  CLUS_3                          15                            17
  CLUS_4                          11                            17
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED       10     37     12     22
  AMP PEAK 11(7P11.2) WILD-TYPE     12     19     11     31
D11V2, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          10                            12
  CLUS_2                          37                            19
  CLUS_3                          12                            11
  CLUS_4                          22                            31
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       75    107     67
  AMP PEAK 11(7P11.2) WILD-TYPE    118     55     68
D11V3, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          75                           118
  CLUS_2                         107                            55
  CLUS_3                          67                            68
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       57     71     51
  AMP PEAK 11(7P11.2) WILD-TYPE     85     43     49
D11V4, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          57                            85
  CLUS_2                          71                            43
  CLUS_3                          51                            49
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       26     37     30
  AMP PEAK 11(7P11.2) WILD-TYPE     34     36     31
D11V5, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          26                            34
  CLUS_2                          37                            36
  CLUS_3                          30                            31
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED       26     24     25     18
  AMP PEAK 11(7P11.2) WILD-TYPE     32     23     24     22
D11V6, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          26                            32
  CLUS_2                          24                            23
  CLUS_3                          25                            24
  CLUS_4                          18                            22
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED       52     92     72     31
  AMP PEAK 11(7P11.2) WILD-TYPE     58     53     81     47
D11V7, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          52                            58
  CLUS_2                          92                            53
  CLUS_3                          72                            81
  CLUS_4                          31                            47
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED      100    110     37
  AMP PEAK 11(7P11.2) WILD-TYPE    115     66     58
D11V8, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                         100                           115
  CLUS_2                         110                            66
  CLUS_3                          37                            58
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED       73     78     53     36
  AMP PEAK 11(7P11.2) WILD-TYPE     72     52     72     28
D11V9, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          73                            72
  CLUS_2                          78                            52
  CLUS_3                          53                            72
  CLUS_4                          36                            28
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       45     85    110
  AMP PEAK 11(7P11.2) WILD-TYPE     26     78    120
D11V10, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          45                            26
  CLUS_2                          85                            78
  CLUS_3                         110                           120
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       75     55     36
  AMP PEAK 11(7P11.2) WILD-TYPE     50     57     55
D11V11, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          75                            50
  CLUS_2                          55                            57
  CLUS_3                          36                            55
D11V12, binary
                               cls
clus                             0  1
  AMP PEAK 11(7P11.2) MUTATED   81 85
  AMP PEAK 11(7P11.2) WILD-TYPE 97 65
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 11(7P11.2) MUTATED     81   85
  AMP PEAK 11(7P11.2) WILD-TYPE   97   65
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          81                            97
  CLUS_2                          85                            65

Clustering(12) Variable = AMP PEAK 12(7Q21.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q21.2) MUTATED       28     35     15     13
  AMP PEAK 12(7Q21.2) WILD-TYPE     14     17     17     15
D12V1, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          28                            14
  CLUS_2                          35                            17
  CLUS_3                          15                            17
  CLUS_4                          13                            15
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q21.2) MUTATED       10     39     15     27
  AMP PEAK 12(7Q21.2) WILD-TYPE     12     17      8     26
D12V2, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          10                            12
  CLUS_2                          39                            17
  CLUS_3                          15                             8
  CLUS_4                          27                            26
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       62    120     76
  AMP PEAK 12(7Q21.2) WILD-TYPE    131     42     59
D12V3, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          62                           131
  CLUS_2                         120                            42
  CLUS_3                          76                            59
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       49     76     55
  AMP PEAK 12(7Q21.2) WILD-TYPE     93     38     45
D12V4, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          49                            93
  CLUS_2                          76                            38
  CLUS_3                          55                            45
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       35     43     25
  AMP PEAK 12(7Q21.2) WILD-TYPE     25     30     36
D12V5, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          35                            25
  CLUS_2                          43                            30
  CLUS_3                          25                            36
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q21.2) MUTATED       31     23     31     18
  AMP PEAK 12(7Q21.2) WILD-TYPE     27     24     18     22
D12V6, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          31                            27
  CLUS_2                          23                            24
  CLUS_3                          31                            18
  CLUS_4                          18                            22
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q21.2) MUTATED       52    104     70     30
  AMP PEAK 12(7Q21.2) WILD-TYPE     58     41     83     48
D12V7, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          52                            58
  CLUS_2                         104                            41
  CLUS_3                          70                            83
  CLUS_4                          30                            48
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       90    119     47
  AMP PEAK 12(7Q21.2) WILD-TYPE    125     57     48
D12V8, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          90                           125
  CLUS_2                         119                            57
  CLUS_3                          47                            48
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q21.2) MUTATED       83     75     48     42
  AMP PEAK 12(7Q21.2) WILD-TYPE     62     55     77     22
D12V9, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          83                            62
  CLUS_2                          75                            55
  CLUS_3                          48                            77
  CLUS_4                          42                            22
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       50     78    120
  AMP PEAK 12(7Q21.2) WILD-TYPE     21     85    110
D12V10, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          50                            21
  CLUS_2                          78                            85
  CLUS_3                         120                           110
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       77     49     38
  AMP PEAK 12(7Q21.2) WILD-TYPE     48     63     53
D12V11, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          77                            48
  CLUS_2                          49                            63
  CLUS_3                          38                            53
D12V12, binary
                               cls
clus                              0   1
  AMP PEAK 12(7Q21.2) MUTATED    74  90
  AMP PEAK 12(7Q21.2) WILD-TYPE 104  60
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 12(7Q21.2) MUTATED     74   90
  AMP PEAK 12(7Q21.2) WILD-TYPE  104   60
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          74                           104
  CLUS_2                          90                            60

Clustering(13) Variable = AMP PEAK 13(8P11.23) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8P11.23) MUTATED       30     24     12     12
  AMP PEAK 13(8P11.23) WILD-TYPE     12     28     20     16
D13V1, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           30                             12
  CLUS_2                           24                             28
  CLUS_3                           12                             20
  CLUS_4                           12                             16
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8P11.23) MUTATED       10     26     15     27
  AMP PEAK 13(8P11.23) WILD-TYPE     12     30      8     26
D13V2, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           10                             12
  CLUS_2                           26                             30
  CLUS_3                           15                              8
  CLUS_4                           27                             26
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P11.23) MUTATED       76     74     82
  AMP PEAK 13(8P11.23) WILD-TYPE    117     88     53
D13V3, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           76                            117
  CLUS_2                           74                             88
  CLUS_3                           82                             53
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P11.23) MUTATED       55     51     57
  AMP PEAK 13(8P11.23) WILD-TYPE     87     63     43
D13V4, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           55                             87
  CLUS_2                           51                             63
  CLUS_3                           57                             43
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P11.23) MUTATED       25     42     31
  AMP PEAK 13(8P11.23) WILD-TYPE     35     31     30
D13V5, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           25                             35
  CLUS_2                           42                             31
  CLUS_3                           31                             30
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8P11.23) MUTATED       23     23     26     26
  AMP PEAK 13(8P11.23) WILD-TYPE     35     24     23     14
D13V6, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           23                             35
  CLUS_2                           23                             24
  CLUS_3                           26                             23
  CLUS_4                           26                             14
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8P11.23) MUTATED       64     68     67     30
  AMP PEAK 13(8P11.23) WILD-TYPE     46     77     86     48
D13V7, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           64                             46
  CLUS_2                           68                             77
  CLUS_3                           67                             86
  CLUS_4                           30                             48
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P11.23) MUTATED      103     82     44
  AMP PEAK 13(8P11.23) WILD-TYPE    112     94     51
D13V8, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                          103                            112
  CLUS_2                           82                             94
  CLUS_3                           44                             51
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8P11.23) MUTATED       73     61     54     29
  AMP PEAK 13(8P11.23) WILD-TYPE     72     69     71     35
D13V9, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           73                             72
  CLUS_2                           61                             69
  CLUS_3                           54                             71
  CLUS_4                           29                             35
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P11.23) MUTATED       31     86    100
  AMP PEAK 13(8P11.23) WILD-TYPE     40     77    130
D13V10, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           31                             40
  CLUS_2                           86                             77
  CLUS_3                          100                            130
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P11.23) MUTATED       58     51     38
  AMP PEAK 13(8P11.23) WILD-TYPE     67     61     53
D13V11, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           58                             67
  CLUS_2                           51                             61
  CLUS_3                           38                             53
D13V12, binary
                                cls
clus                               0   1
  AMP PEAK 13(8P11.23) MUTATED    74  73
  AMP PEAK 13(8P11.23) WILD-TYPE 104  77
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 13(8P11.23) MUTATED     74   73
  AMP PEAK 13(8P11.23) WILD-TYPE  104   77
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           74                            104
  CLUS_2                           73                             77

Clustering(14) Variable = AMP PEAK 14(8Q24.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(8Q24.21) MUTATED       30     34     22     20
  AMP PEAK 14(8Q24.21) WILD-TYPE     12     18     10      8
D14V1, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           30                             12
  CLUS_2                           34                             18
  CLUS_3                           22                             10
  CLUS_4                           20                              8
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(8Q24.21) MUTATED       17     37     15     37
  AMP PEAK 14(8Q24.21) WILD-TYPE      5     19      8     16
D14V2, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           17                              5
  CLUS_2                           37                             19
  CLUS_3                           15                              8
  CLUS_4                           37                             16
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8Q24.21) MUTATED      124    110    108
  AMP PEAK 14(8Q24.21) WILD-TYPE     69     52     27
D14V3, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                          124                             69
  CLUS_2                          110                             52
  CLUS_3                          108                             27
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8Q24.21) MUTATED       96     78     76
  AMP PEAK 14(8Q24.21) WILD-TYPE     46     36     24
D14V4, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           96                             46
  CLUS_2                           78                             36
  CLUS_3                           76                             24
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8Q24.21) MUTATED       44     55     43
  AMP PEAK 14(8Q24.21) WILD-TYPE     16     18     18
D14V5, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           44                             16
  CLUS_2                           55                             18
  CLUS_3                           43                             18
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(8Q24.21) MUTATED       42     35     38     27
  AMP PEAK 14(8Q24.21) WILD-TYPE     16     12     11     13
D14V6, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           42                             16
  CLUS_2                           35                             12
  CLUS_3                           38                             11
  CLUS_4                           27                             13
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(8Q24.21) MUTATED       76     99    111     53
  AMP PEAK 14(8Q24.21) WILD-TYPE     34     46     42     25
D14V7, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           76                             34
  CLUS_2                           99                             46
  CLUS_3                          111                             42
  CLUS_4                           53                             25
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8Q24.21) MUTATED      151    121     67
  AMP PEAK 14(8Q24.21) WILD-TYPE     64     55     28
D14V8, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                          151                             64
  CLUS_2                          121                             55
  CLUS_3                           67                             28
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(8Q24.21) MUTATED      102     95     87     40
  AMP PEAK 14(8Q24.21) WILD-TYPE     43     35     38     24
D14V9, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                          102                             43
  CLUS_2                           95                             35
  CLUS_3                           87                             38
  CLUS_4                           40                             24
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8Q24.21) MUTATED       49    118    157
  AMP PEAK 14(8Q24.21) WILD-TYPE     22     45     73
D14V10, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           49                             22
  CLUS_2                          118                             45
  CLUS_3                          157                             73
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8Q24.21) MUTATED       90     81     58
  AMP PEAK 14(8Q24.21) WILD-TYPE     35     31     33
D14V11, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           90                             35
  CLUS_2                           81                             31
  CLUS_3                           58                             33
D14V12, binary
                                cls
clus                               0   1
  AMP PEAK 14(8Q24.21) MUTATED   124 105
  AMP PEAK 14(8Q24.21) WILD-TYPE  54  45
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 14(8Q24.21) MUTATED    124  105
  AMP PEAK 14(8Q24.21) WILD-TYPE   54   45
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                          124                             54
  CLUS_2                          105                             45

Clustering(15) Variable = AMP PEAK 15(9P13.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(9P13.3) MUTATED       10     13      5     12
  AMP PEAK 15(9P13.3) WILD-TYPE     32     39     27     16
D15V1, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          10                            32
  CLUS_2                          13                            39
  CLUS_3                           5                            27
  CLUS_4                          12                            16
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(9P13.3) MUTATED        5     16      7     12
  AMP PEAK 15(9P13.3) WILD-TYPE     17     40     16     41
D15V2, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                           5                            17
  CLUS_2                          16                            40
  CLUS_3                           7                            16
  CLUS_4                          12                            41
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(9P13.3) MUTATED       40     60     34
  AMP PEAK 15(9P13.3) WILD-TYPE    153    102    101
D15V3, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          40                           153
  CLUS_2                          60                           102
  CLUS_3                          34                           101
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(9P13.3) MUTATED       31     47     25
  AMP PEAK 15(9P13.3) WILD-TYPE    111     67     75
D15V4, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          31                           111
  CLUS_2                          47                            67
  CLUS_3                          25                            75
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(9P13.3) MUTATED       21     13     14
  AMP PEAK 15(9P13.3) WILD-TYPE     39     60     47
D15V5, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          21                            39
  CLUS_2                          13                            60
  CLUS_3                          14                            47
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(9P13.3) MUTATED       22     13      9      4
  AMP PEAK 15(9P13.3) WILD-TYPE     36     34     40     36
D15V6, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          22                            36
  CLUS_2                          13                            34
  CLUS_3                           9                            40
  CLUS_4                           4                            36
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(9P13.3) MUTATED       21     57     42     14
  AMP PEAK 15(9P13.3) WILD-TYPE     89     88    111     64
D15V7, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          21                            89
  CLUS_2                          57                            88
  CLUS_3                          42                           111
  CLUS_4                          14                            64
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(9P13.3) MUTATED       41     67     26
  AMP PEAK 15(9P13.3) WILD-TYPE    174    109     69
D15V8, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          41                           174
  CLUS_2                          67                           109
  CLUS_3                          26                            69
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(9P13.3) MUTATED       44     39     23     23
  AMP PEAK 15(9P13.3) WILD-TYPE    101     91    102     41
D15V9, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          44                           101
  CLUS_2                          39                            91
  CLUS_3                          23                           102
  CLUS_4                          23                            41
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(9P13.3) MUTATED       25     43     61
  AMP PEAK 15(9P13.3) WILD-TYPE     46    120    169
D15V10, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          25                            46
  CLUS_2                          43                           120
  CLUS_3                          61                           169
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(9P13.3) MUTATED       42     24     23
  AMP PEAK 15(9P13.3) WILD-TYPE     83     88     68
D15V11, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          42                            83
  CLUS_2                          24                            88
  CLUS_3                          23                            68
D15V12, binary
                               cls
clus                              0   1
  AMP PEAK 15(9P13.3) MUTATED    41  48
  AMP PEAK 15(9P13.3) WILD-TYPE 137 102
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 15(9P13.3) MUTATED     41   48
  AMP PEAK 15(9P13.3) WILD-TYPE  137  102
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          41                           137
  CLUS_2                          48                           102

Clustering(16) Variable = AMP PEAK 16(11Q13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(11Q13.3) MUTATED       17     11     11     14
  AMP PEAK 16(11Q13.3) WILD-TYPE     25     41     21     14
D16V1, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           17                             25
  CLUS_2                           11                             41
  CLUS_3                           11                             21
  CLUS_4                           14                             14
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(11Q13.3) MUTATED       10     12     10     21
  AMP PEAK 16(11Q13.3) WILD-TYPE     12     44     13     32
D16V2, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           10                             12
  CLUS_2                           12                             44
  CLUS_3                           10                             13
  CLUS_4                           21                             32
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(11Q13.3) MUTATED       48     61     72
  AMP PEAK 16(11Q13.3) WILD-TYPE    145    101     63
D16V3, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           48                            145
  CLUS_2                           61                            101
  CLUS_3                           72                             63
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(11Q13.3) MUTATED       40     41     54
  AMP PEAK 16(11Q13.3) WILD-TYPE    102     73     46
D16V4, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           40                            102
  CLUS_2                           41                             73
  CLUS_3                           54                             46
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(11Q13.3) MUTATED       26     24     18
  AMP PEAK 16(11Q13.3) WILD-TYPE     34     49     43
D16V5, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           26                             34
  CLUS_2                           24                             49
  CLUS_3                           18                             43
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(11Q13.3) MUTATED       23     16     22      7
  AMP PEAK 16(11Q13.3) WILD-TYPE     35     31     27     33
D16V6, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           23                             35
  CLUS_2                           16                             31
  CLUS_3                           22                             27
  CLUS_4                            7                             33
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(11Q13.3) MUTATED       46     40     68     27
  AMP PEAK 16(11Q13.3) WILD-TYPE     64    105     85     51
D16V7, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           46                             64
  CLUS_2                           40                            105
  CLUS_3                           68                             85
  CLUS_4                           27                             51
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(11Q13.3) MUTATED       82     54     45
  AMP PEAK 16(11Q13.3) WILD-TYPE    133    122     50
D16V8, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           82                            133
  CLUS_2                           54                            122
  CLUS_3                           45                             50
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(11Q13.3) MUTATED       54     64     42     14
  AMP PEAK 16(11Q13.3) WILD-TYPE     91     66     83     50
D16V9, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           54                             91
  CLUS_2                           64                             66
  CLUS_3                           42                             83
  CLUS_4                           14                             50
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(11Q13.3) MUTATED       19     67     88
  AMP PEAK 16(11Q13.3) WILD-TYPE     52     96    142
D16V10, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           19                             52
  CLUS_2                           67                             96
  CLUS_3                           88                            142
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(11Q13.3) MUTATED       57     43     25
  AMP PEAK 16(11Q13.3) WILD-TYPE     68     69     66
D16V11, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           57                             68
  CLUS_2                           43                             69
  CLUS_3                           25                             66
D16V12, binary
                                cls
clus                               0   1
  AMP PEAK 16(11Q13.3) MUTATED    64  61
  AMP PEAK 16(11Q13.3) WILD-TYPE 114  89
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 16(11Q13.3) MUTATED     64   61
  AMP PEAK 16(11Q13.3) WILD-TYPE  114   89
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           64                            114
  CLUS_2                           61                             89

Clustering(17) Variable = AMP PEAK 17(12P13.33) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(12P13.33) MUTATED       12     33     13     13
  AMP PEAK 17(12P13.33) WILD-TYPE     30     19     19     15
D17V1, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            12                              30
  CLUS_2                            33                              19
  CLUS_3                            13                              19
  CLUS_4                            13                              15
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(12P13.33) MUTATED        7     34     10     20
  AMP PEAK 17(12P13.33) WILD-TYPE     15     22     13     33
D17V2, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                             7                              15
  CLUS_2                            34                              22
  CLUS_3                            10                              13
  CLUS_4                            20                              33
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(12P13.33) MUTATED       70    106     73
  AMP PEAK 17(12P13.33) WILD-TYPE    123     56     62
D17V3, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            70                             123
  CLUS_2                           106                              56
  CLUS_3                            73                              62
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(12P13.33) MUTATED       60     73     60
  AMP PEAK 17(12P13.33) WILD-TYPE     82     41     40
D17V4, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            60                              82
  CLUS_2                            73                              41
  CLUS_3                            60                              40
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(12P13.33) MUTATED       35     34     34
  AMP PEAK 17(12P13.33) WILD-TYPE     25     39     27
D17V5, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            35                              25
  CLUS_2                            34                              39
  CLUS_3                            34                              27
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(12P13.33) MUTATED       33     26     25     19
  AMP PEAK 17(12P13.33) WILD-TYPE     25     21     24     21
D17V6, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            33                              25
  CLUS_2                            26                              21
  CLUS_3                            25                              24
  CLUS_4                            19                              21
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(12P13.33) MUTATED       37     94     88     28
  AMP PEAK 17(12P13.33) WILD-TYPE     73     51     65     50
D17V7, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            37                              73
  CLUS_2                            94                              51
  CLUS_3                            88                              65
  CLUS_4                            28                              50
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(12P13.33) MUTATED       85    106     56
  AMP PEAK 17(12P13.33) WILD-TYPE    130     70     39
D17V8, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            85                             130
  CLUS_2                           106                              70
  CLUS_3                            56                              39
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(12P13.33) MUTATED       71     79     54     37
  AMP PEAK 17(12P13.33) WILD-TYPE     74     51     71     27
D17V9, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            71                              74
  CLUS_2                            79                              51
  CLUS_3                            54                              71
  CLUS_4                            37                              27
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(12P13.33) MUTATED       45     90    106
  AMP PEAK 17(12P13.33) WILD-TYPE     26     73    124
D17V10, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            45                              26
  CLUS_2                            90                              73
  CLUS_3                           106                             124
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(12P13.33) MUTATED       74     58     43
  AMP PEAK 17(12P13.33) WILD-TYPE     51     54     48
D17V11, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            74                              51
  CLUS_2                            58                              54
  CLUS_3                            43                              48
D17V12, binary
                                 cls
clus                               0  1
  AMP PEAK 17(12P13.33) MUTATED   86 89
  AMP PEAK 17(12P13.33) WILD-TYPE 92 61
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  AMP PEAK 17(12P13.33) MUTATED     86   89
  AMP PEAK 17(12P13.33) WILD-TYPE   92   61
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            86                              92
  CLUS_2                            89                              61

Clustering(18) Variable = AMP PEAK 18(12Q15) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(12Q15) MUTATED       10     21     11     14
  AMP PEAK 18(12Q15) WILD-TYPE     32     31     21     14
D18V1, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         10                           32
  CLUS_2                         21                           31
  CLUS_3                         11                           21
  CLUS_4                         14                           14
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(12Q15) MUTATED       11     23      8     14
  AMP PEAK 18(12Q15) WILD-TYPE     11     33     15     39
D18V2, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         11                           11
  CLUS_2                         23                           33
  CLUS_3                          8                           15
  CLUS_4                         14                           39
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(12Q15) MUTATED       51     79     48
  AMP PEAK 18(12Q15) WILD-TYPE    142     83     87
D18V3, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         51                          142
  CLUS_2                         79                           83
  CLUS_3                         48                           87
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(12Q15) MUTATED       40     52     38
  AMP PEAK 18(12Q15) WILD-TYPE    102     62     62
D18V4, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         40                          102
  CLUS_2                         52                           62
  CLUS_3                         38                           62
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(12Q15) MUTATED       25     26     23
  AMP PEAK 18(12Q15) WILD-TYPE     35     47     38
D18V5, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         25                           35
  CLUS_2                         26                           47
  CLUS_3                         23                           38
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(12Q15) MUTATED       24     21     16     13
  AMP PEAK 18(12Q15) WILD-TYPE     34     26     33     27
D18V6, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         24                           34
  CLUS_2                         21                           26
  CLUS_3                         16                           33
  CLUS_4                         13                           27
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(12Q15) MUTATED       29     67     54     26
  AMP PEAK 18(12Q15) WILD-TYPE     81     78     99     52
D18V7, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         29                           81
  CLUS_2                         67                           78
  CLUS_3                         54                           99
  CLUS_4                         26                           52
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(12Q15) MUTATED       61     75     40
  AMP PEAK 18(12Q15) WILD-TYPE    154    101     55
D18V8, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         61                          154
  CLUS_2                         75                          101
  CLUS_3                         40                           55
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(12Q15) MUTATED       53     49     40     26
  AMP PEAK 18(12Q15) WILD-TYPE     92     81     85     38
D18V9, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         53                           92
  CLUS_2                         49                           81
  CLUS_3                         40                           85
  CLUS_4                         26                           38
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(12Q15) MUTATED       31     57     80
  AMP PEAK 18(12Q15) WILD-TYPE     40    106    150
D18V10, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         31                           40
  CLUS_2                         57                          106
  CLUS_3                         80                          150
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(12Q15) MUTATED       54     33     31
  AMP PEAK 18(12Q15) WILD-TYPE     71     79     60
D18V11, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         54                           71
  CLUS_2                         33                           79
  CLUS_3                         31                           60
D18V12, binary
                              cls
clus                             0   1
  AMP PEAK 18(12Q15) MUTATED    58  60
  AMP PEAK 18(12Q15) WILD-TYPE 120  90
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  AMP PEAK 18(12Q15) MUTATED     58   60
  AMP PEAK 18(12Q15) WILD-TYPE  120   90
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         58                          120
  CLUS_2                         60                           90

Clustering(19) Variable = AMP PEAK 19(13Q34) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(13Q34) MUTATED        7     10      5      5
  AMP PEAK 19(13Q34) WILD-TYPE     35     42     27     23
D19V1, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                          7                           35
  CLUS_2                         10                           42
  CLUS_3                          5                           27
  CLUS_4                          5                           23
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(13Q34) MUTATED        9     10      2      6
  AMP PEAK 19(13Q34) WILD-TYPE     13     46     21     47
D19V2, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                          9                           13
  CLUS_2                         10                           46
  CLUS_3                          2                           21
  CLUS_4                          6                           47
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(13Q34) MUTATED       36     33     19
  AMP PEAK 19(13Q34) WILD-TYPE    157    129    116
D19V3, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                         36                          157
  CLUS_2                         33                          129
  CLUS_3                         19                          116
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(13Q34) MUTATED       24     22     21
  AMP PEAK 19(13Q34) WILD-TYPE    118     92     79
D19V4, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                         24                          118
  CLUS_2                         22                           92
  CLUS_3                         21                           79
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(13Q34) MUTATED       10     15     11
  AMP PEAK 19(13Q34) WILD-TYPE     50     58     50
D19V5, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                         10                           50
  CLUS_2                         15                           58
  CLUS_3                         11                           50
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(13Q34) MUTATED       11      8     14      3
  AMP PEAK 19(13Q34) WILD-TYPE     47     39     35     37
D19V6, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                         11                           47
  CLUS_2                          8                           39
  CLUS_3                         14                           35
  CLUS_4                          3                           37
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(13Q34) MUTATED       19     26     31     12
  AMP PEAK 19(13Q34) WILD-TYPE     91    119    122     66
D19V7, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                         19                           91
  CLUS_2                         26                          119
  CLUS_3                         31                          122
  CLUS_4                         12                           66
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(13Q34) MUTATED       37     31     20
  AMP PEAK 19(13Q34) WILD-TYPE    178    145     75
D19V8, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                         37                          178
  CLUS_2                         31                          145
  CLUS_3                         20                           75
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(13Q34) MUTATED       29     26     21      7
  AMP PEAK 19(13Q34) WILD-TYPE    116    104    104     57
D19V9, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                         29                          116
  CLUS_2                         26                          104
  CLUS_3                         21                          104
  CLUS_4                          7                           57
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(13Q34) MUTATED        7     32     44
  AMP PEAK 19(13Q34) WILD-TYPE     64    131    186
D19V10, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                          7                           64
  CLUS_2                         32                          131
  CLUS_3                         44                          186
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(13Q34) MUTATED       23     23     14
  AMP PEAK 19(13Q34) WILD-TYPE    102     89     77
D19V11, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                         23                          102
  CLUS_2                         23                           89
  CLUS_3                         14                           77
D19V12, binary
                              cls
clus                             0   1
  AMP PEAK 19(13Q34) MUTATED    35  25
  AMP PEAK 19(13Q34) WILD-TYPE 143 125
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  AMP PEAK 19(13Q34) MUTATED     35   25
  AMP PEAK 19(13Q34) WILD-TYPE  143  125
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                         35                          143
  CLUS_2                         25                          125

Clustering(20) Variable = AMP PEAK 20(14Q13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(14Q13.3) MUTATED       18     15      8     11
  AMP PEAK 20(14Q13.3) WILD-TYPE     24     37     24     17
D20V1, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           18                             24
  CLUS_2                           15                             37
  CLUS_3                            8                             24
  CLUS_4                           11                             17
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(14Q13.3) MUTATED        8     15     12     17
  AMP PEAK 20(14Q13.3) WILD-TYPE     14     41     11     36
D20V2, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                            8                             14
  CLUS_2                           15                             41
  CLUS_3                           12                             11
  CLUS_4                           17                             36
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(14Q13.3) MUTATED       51     55     48
  AMP PEAK 20(14Q13.3) WILD-TYPE    142    107     87
D20V3, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           51                            142
  CLUS_2                           55                            107
  CLUS_3                           48                             87
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(14Q13.3) MUTATED       36     42     32
  AMP PEAK 20(14Q13.3) WILD-TYPE    106     72     68
D20V4, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           36                            106
  CLUS_2                           42                             72
  CLUS_3                           32                             68
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(14Q13.3) MUTATED       18     26     18
  AMP PEAK 20(14Q13.3) WILD-TYPE     42     47     43
D20V5, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           18                             42
  CLUS_2                           26                             47
  CLUS_3                           18                             43
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(14Q13.3) MUTATED       18     17     22      5
  AMP PEAK 20(14Q13.3) WILD-TYPE     40     30     27     35
D20V6, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           18                             40
  CLUS_2                           17                             30
  CLUS_3                           22                             27
  CLUS_4                            5                             35
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(14Q13.3) MUTATED       42     46     39     27
  AMP PEAK 20(14Q13.3) WILD-TYPE     68     99    114     51
D20V7, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           42                             68
  CLUS_2                           46                             99
  CLUS_3                           39                            114
  CLUS_4                           27                             51
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(14Q13.3) MUTATED       77     57     20
  AMP PEAK 20(14Q13.3) WILD-TYPE    138    119     75
D20V8, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           77                            138
  CLUS_2                           57                            119
  CLUS_3                           20                             75
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(14Q13.3) MUTATED       53     48     38     10
  AMP PEAK 20(14Q13.3) WILD-TYPE     92     82     87     54
D20V9, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           53                             92
  CLUS_2                           48                             82
  CLUS_3                           38                             87
  CLUS_4                           10                             54
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(14Q13.3) MUTATED       16     55     78
  AMP PEAK 20(14Q13.3) WILD-TYPE     55    108    152
D20V10, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           16                             55
  CLUS_2                           55                            108
  CLUS_3                           78                            152
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(14Q13.3) MUTATED       40     38     22
  AMP PEAK 20(14Q13.3) WILD-TYPE     85     74     69
D20V11, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           40                             85
  CLUS_2                           38                             74
  CLUS_3                           22                             69
D20V12, binary
                                cls
clus                               0   1
  AMP PEAK 20(14Q13.3) MUTATED    56  44
  AMP PEAK 20(14Q13.3) WILD-TYPE 122 106
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 20(14Q13.3) MUTATED     56   44
  AMP PEAK 20(14Q13.3) WILD-TYPE  122  106
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           56                            122
  CLUS_2                           44                            106

Clustering(21) Variable = AMP PEAK 21(15Q26.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(15Q26.3) MUTATED       15     25     10      9
  AMP PEAK 21(15Q26.3) WILD-TYPE     27     27     22     19
D21V1, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           15                             27
  CLUS_2                           25                             27
  CLUS_3                           10                             22
  CLUS_4                            9                             19
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(15Q26.3) MUTATED        4     28      8     19
  AMP PEAK 21(15Q26.3) WILD-TYPE     18     28     15     34
D21V2, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                            4                             18
  CLUS_2                           28                             28
  CLUS_3                            8                             15
  CLUS_4                           19                             34
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       46     78     52
  AMP PEAK 21(15Q26.3) WILD-TYPE    147     84     83
D21V3, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           46                            147
  CLUS_2                           78                             84
  CLUS_3                           52                             83
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       34     54     37
  AMP PEAK 21(15Q26.3) WILD-TYPE    108     60     63
D21V4, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           34                            108
  CLUS_2                           54                             60
  CLUS_3                           37                             63
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       18     27     25
  AMP PEAK 21(15Q26.3) WILD-TYPE     42     46     36
D21V5, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           18                             42
  CLUS_2                           27                             46
  CLUS_3                           25                             36
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(15Q26.3) MUTATED       14     24     19     13
  AMP PEAK 21(15Q26.3) WILD-TYPE     44     23     30     27
D21V6, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           14                             44
  CLUS_2                           24                             23
  CLUS_3                           19                             30
  CLUS_4                           13                             27
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(15Q26.3) MUTATED       26     75     49     23
  AMP PEAK 21(15Q26.3) WILD-TYPE     84     70    104     55
D21V7, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           26                             84
  CLUS_2                           75                             70
  CLUS_3                           49                            104
  CLUS_4                           23                             55
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       63     82     28
  AMP PEAK 21(15Q26.3) WILD-TYPE    152     94     67
D21V8, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           63                            152
  CLUS_2                           82                             94
  CLUS_3                           28                             67
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(15Q26.3) MUTATED       51     50     35     34
  AMP PEAK 21(15Q26.3) WILD-TYPE     94     80     90     30
D21V9, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           51                             94
  CLUS_2                           50                             80
  CLUS_3                           35                             90
  CLUS_4                           34                             30
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       38     62     70
  AMP PEAK 21(15Q26.3) WILD-TYPE     33    101    160
D21V10, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           38                             33
  CLUS_2                           62                            101
  CLUS_3                           70                            160
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       54     27     33
  AMP PEAK 21(15Q26.3) WILD-TYPE     71     85     58
D21V11, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           54                             71
  CLUS_2                           27                             85
  CLUS_3                           33                             58
D21V12, binary
                                cls
clus                               0   1
  AMP PEAK 21(15Q26.3) MUTATED    51  63
  AMP PEAK 21(15Q26.3) WILD-TYPE 127  87
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 21(15Q26.3) MUTATED     51   63
  AMP PEAK 21(15Q26.3) WILD-TYPE  127   87
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           51                            127
  CLUS_2                           63                             87

Clustering(22) Variable = AMP PEAK 22(17Q25.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(17Q25.1) MUTATED       20     31      9     19
  AMP PEAK 22(17Q25.1) WILD-TYPE     22     21     23      9
D22V1, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           20                             22
  CLUS_2                           31                             21
  CLUS_3                            9                             23
  CLUS_4                           19                              9
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(17Q25.1) MUTATED       13     34     14     18
  AMP PEAK 22(17Q25.1) WILD-TYPE      9     22      9     35
D22V2, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           13                              9
  CLUS_2                           34                             22
  CLUS_3                           14                              9
  CLUS_4                           18                             35
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q25.1) MUTATED       54    111     68
  AMP PEAK 22(17Q25.1) WILD-TYPE    139     51     67
D22V3, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           54                            139
  CLUS_2                          111                             51
  CLUS_3                           68                             67
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q25.1) MUTATED       40     72     52
  AMP PEAK 22(17Q25.1) WILD-TYPE    102     42     48
D22V4, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           40                            102
  CLUS_2                           72                             42
  CLUS_3                           52                             48
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q25.1) MUTATED       31     32     24
  AMP PEAK 22(17Q25.1) WILD-TYPE     29     41     37
D22V5, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           31                             29
  CLUS_2                           32                             41
  CLUS_3                           24                             37
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(17Q25.1) MUTATED       26     24     24     13
  AMP PEAK 22(17Q25.1) WILD-TYPE     32     23     25     27
D22V6, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           26                             32
  CLUS_2                           24                             23
  CLUS_3                           24                             25
  CLUS_4                           13                             27
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(17Q25.1) MUTATED       42     94     68     27
  AMP PEAK 22(17Q25.1) WILD-TYPE     68     51     85     51
D22V7, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           42                             68
  CLUS_2                           94                             51
  CLUS_3                           68                             85
  CLUS_4                           27                             51
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q25.1) MUTATED       73    110     48
  AMP PEAK 22(17Q25.1) WILD-TYPE    142     66     47
D22V8, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           73                            142
  CLUS_2                          110                             66
  CLUS_3                           48                             47
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(17Q25.1) MUTATED       74     77     40     29
  AMP PEAK 22(17Q25.1) WILD-TYPE     71     53     85     35
D22V9, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           74                             71
  CLUS_2                           77                             53
  CLUS_3                           40                             85
  CLUS_4                           29                             35
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q25.1) MUTATED       43     80     97
  AMP PEAK 22(17Q25.1) WILD-TYPE     28     83    133
D22V10, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           43                             28
  CLUS_2                           80                             83
  CLUS_3                           97                            133
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q25.1) MUTATED       79     38     36
  AMP PEAK 22(17Q25.1) WILD-TYPE     46     74     55
D22V11, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           79                             46
  CLUS_2                           38                             74
  CLUS_3                           36                             55
D22V12, binary
                                cls
clus                               0   1
  AMP PEAK 22(17Q25.1) MUTATED    62  91
  AMP PEAK 22(17Q25.1) WILD-TYPE 116  59
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 22(17Q25.1) MUTATED     62   91
  AMP PEAK 22(17Q25.1) WILD-TYPE  116   59
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           62                            116
  CLUS_2                           91                             59

Clustering(23) Variable = AMP PEAK 23(18P11.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(18P11.32) MUTATED       13     27      8      8
  AMP PEAK 23(18P11.32) WILD-TYPE     29     25     24     20
D23V1, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            13                              29
  CLUS_2                            27                              25
  CLUS_3                             8                              24
  CLUS_4                             8                              20
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(18P11.32) MUTATED        6     30      7     13
  AMP PEAK 23(18P11.32) WILD-TYPE     16     26     16     40
D23V2, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                             6                              16
  CLUS_2                            30                              26
  CLUS_3                             7                              16
  CLUS_4                            13                              40
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       42     82     51
  AMP PEAK 23(18P11.32) WILD-TYPE    151     80     84
D23V3, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            42                             151
  CLUS_2                            82                              80
  CLUS_3                            51                              84
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       31     51     46
  AMP PEAK 23(18P11.32) WILD-TYPE    111     63     54
D23V4, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            31                             111
  CLUS_2                            51                              63
  CLUS_3                            46                              54
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       26     28     20
  AMP PEAK 23(18P11.32) WILD-TYPE     34     45     41
D23V5, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            26                              34
  CLUS_2                            28                              45
  CLUS_3                            20                              41
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(18P11.32) MUTATED       24     19     20     11
  AMP PEAK 23(18P11.32) WILD-TYPE     34     28     29     29
D23V6, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            24                              34
  CLUS_2                            19                              28
  CLUS_3                            20                              29
  CLUS_4                            11                              29
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(18P11.32) MUTATED       35     66     51     22
  AMP PEAK 23(18P11.32) WILD-TYPE     75     79    102     56
D23V7, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            35                              75
  CLUS_2                            66                              79
  CLUS_3                            51                             102
  CLUS_4                            22                              56
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       58     81     35
  AMP PEAK 23(18P11.32) WILD-TYPE    157     95     60
D23V8, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            58                             157
  CLUS_2                            81                              95
  CLUS_3                            35                              60
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(18P11.32) MUTATED       53     58     29     27
  AMP PEAK 23(18P11.32) WILD-TYPE     92     72     96     37
D23V9, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            53                              92
  CLUS_2                            58                              72
  CLUS_3                            29                              96
  CLUS_4                            27                              37
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       30     67     70
  AMP PEAK 23(18P11.32) WILD-TYPE     41     96    160
D23V10, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            30                              41
  CLUS_2                            67                              96
  CLUS_3                            70                             160
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       56     28     31
  AMP PEAK 23(18P11.32) WILD-TYPE     69     84     60
D23V11, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            56                              69
  CLUS_2                            28                              84
  CLUS_3                            31                              60
D23V12, binary
                                 cls
clus                                0   1
  AMP PEAK 23(18P11.32) MUTATED    52  63
  AMP PEAK 23(18P11.32) WILD-TYPE 126  87
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  AMP PEAK 23(18P11.32) MUTATED     52   63
  AMP PEAK 23(18P11.32) WILD-TYPE  126   87
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            52                             126
  CLUS_2                            63                              87

Clustering(24) Variable = AMP PEAK 24(18Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(18Q11.2) MUTATED        8     25      5     15
  AMP PEAK 24(18Q11.2) WILD-TYPE     34     27     27     13
D24V1, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                            8                             34
  CLUS_2                           25                             27
  CLUS_3                            5                             27
  CLUS_4                           15                             13
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(18Q11.2) MUTATED        8     27      4     14
  AMP PEAK 24(18Q11.2) WILD-TYPE     14     29     19     39
D24V2, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                            8                             14
  CLUS_2                           27                             29
  CLUS_3                            4                             19
  CLUS_4                           14                             39
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       33     76     39
  AMP PEAK 24(18Q11.2) WILD-TYPE    160     86     96
D24V3, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           33                            160
  CLUS_2                           76                             86
  CLUS_3                           39                             96
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       24     49     31
  AMP PEAK 24(18Q11.2) WILD-TYPE    118     65     69
D24V4, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           24                            118
  CLUS_2                           49                             65
  CLUS_3                           31                             69
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       24     22     16
  AMP PEAK 24(18Q11.2) WILD-TYPE     36     51     45
D24V5, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           24                             36
  CLUS_2                           22                             51
  CLUS_3                           16                             45
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(18Q11.2) MUTATED       23     15     15      9
  AMP PEAK 24(18Q11.2) WILD-TYPE     35     32     34     31
D24V6, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           23                             35
  CLUS_2                           15                             32
  CLUS_3                           15                             34
  CLUS_4                            9                             31
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(18Q11.2) MUTATED       25     63     50      9
  AMP PEAK 24(18Q11.2) WILD-TYPE     85     82    103     69
D24V7, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           25                             85
  CLUS_2                           63                             82
  CLUS_3                           50                            103
  CLUS_4                            9                             69
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       34     74     39
  AMP PEAK 24(18Q11.2) WILD-TYPE    181    102     56
D24V8, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           34                            181
  CLUS_2                           74                            102
  CLUS_3                           39                             56
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(18Q11.2) MUTATED       48     45     21     26
  AMP PEAK 24(18Q11.2) WILD-TYPE     97     85    104     38
D24V9, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           48                             97
  CLUS_2                           45                             85
  CLUS_3                           21                            104
  CLUS_4                           26                             38
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       32     51     57
  AMP PEAK 24(18Q11.2) WILD-TYPE     39    112    173
D24V10, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           32                             39
  CLUS_2                           51                            112
  CLUS_3                           57                            173
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       49     17     25
  AMP PEAK 24(18Q11.2) WILD-TYPE     76     95     66
D24V11, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           49                             76
  CLUS_2                           17                             95
  CLUS_3                           25                             66
D24V12, binary
                                cls
clus                               0   1
  AMP PEAK 24(18Q11.2) MUTATED    34  57
  AMP PEAK 24(18Q11.2) WILD-TYPE 144  93
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 24(18Q11.2) MUTATED     34   57
  AMP PEAK 24(18Q11.2) WILD-TYPE  144   93
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           34                            144
  CLUS_2                           57                             93

Clustering(25) Variable = AMP PEAK 25(19Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(19Q12) MUTATED       16     27     11     13
  AMP PEAK 25(19Q12) WILD-TYPE     26     25     21     15
D25V1, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         16                           26
  CLUS_2                         27                           25
  CLUS_3                         11                           21
  CLUS_4                         13                           15
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(19Q12) MUTATED       10     27     11     19
  AMP PEAK 25(19Q12) WILD-TYPE     12     29     12     34
D25V2, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         10                           12
  CLUS_2                         27                           29
  CLUS_3                         11                           12
  CLUS_4                         19                           34
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19Q12) MUTATED       57    107     54
  AMP PEAK 25(19Q12) WILD-TYPE    136     55     81
D25V3, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         57                          136
  CLUS_2                        107                           55
  CLUS_3                         54                           81
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19Q12) MUTATED       54     68     42
  AMP PEAK 25(19Q12) WILD-TYPE     88     46     58
D25V4, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         54                           88
  CLUS_2                         68                           46
  CLUS_3                         42                           58
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19Q12) MUTATED       32     28     28
  AMP PEAK 25(19Q12) WILD-TYPE     28     45     33
D25V5, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         32                           28
  CLUS_2                         28                           45
  CLUS_3                         28                           33
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(19Q12) MUTATED       32     23     22     11
  AMP PEAK 25(19Q12) WILD-TYPE     26     24     27     29
D25V6, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         32                           26
  CLUS_2                         23                           24
  CLUS_3                         22                           27
  CLUS_4                         11                           29
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(19Q12) MUTATED       36     80     71     29
  AMP PEAK 25(19Q12) WILD-TYPE     74     65     82     49
D25V7, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         36                           74
  CLUS_2                         80                           65
  CLUS_3                         71                           82
  CLUS_4                         29                           49
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19Q12) MUTATED       77     92     47
  AMP PEAK 25(19Q12) WILD-TYPE    138     84     48
D25V8, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         77                          138
  CLUS_2                         92                           84
  CLUS_3                         47                           48
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(19Q12) MUTATED       68     60     47     35
  AMP PEAK 25(19Q12) WILD-TYPE     77     70     78     29
D25V9, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         68                           77
  CLUS_2                         60                           70
  CLUS_3                         47                           78
  CLUS_4                         35                           29
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19Q12) MUTATED       37     73    100
  AMP PEAK 25(19Q12) WILD-TYPE     34     90    130
D25V10, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         37                           34
  CLUS_2                         73                           90
  CLUS_3                        100                          130
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19Q12) MUTATED       68     42     37
  AMP PEAK 25(19Q12) WILD-TYPE     57     70     54
D25V11, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         68                           57
  CLUS_2                         42                           70
  CLUS_3                         37                           54
D25V12, binary
                              cls
clus                             0   1
  AMP PEAK 25(19Q12) MUTATED    70  77
  AMP PEAK 25(19Q12) WILD-TYPE 108  73
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  AMP PEAK 25(19Q12) MUTATED     70   77
  AMP PEAK 25(19Q12) WILD-TYPE  108   73
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         70                          108
  CLUS_2                         77                           73

Clustering(26) Variable = AMP PEAK 26(19Q13.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(19Q13.2) MUTATED       21     28     11     12
  AMP PEAK 26(19Q13.2) WILD-TYPE     21     24     21     16
D26V1, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           21                             21
  CLUS_2                           28                             24
  CLUS_3                           11                             21
  CLUS_4                           12                             16
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(19Q13.2) MUTATED        9     29     13     21
  AMP PEAK 26(19Q13.2) WILD-TYPE     13     27     10     32
D26V2, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                            9                             13
  CLUS_2                           29                             27
  CLUS_3                           13                             10
  CLUS_4                           21                             32
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q13.2) MUTATED       64    107     58
  AMP PEAK 26(19Q13.2) WILD-TYPE    129     55     77
D26V3, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           64                            129
  CLUS_2                          107                             55
  CLUS_3                           58                             77
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q13.2) MUTATED       57     69     43
  AMP PEAK 26(19Q13.2) WILD-TYPE     85     45     57
D26V4, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           57                             85
  CLUS_2                           69                             45
  CLUS_3                           43                             57
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q13.2) MUTATED       32     30     28
  AMP PEAK 26(19Q13.2) WILD-TYPE     28     43     33
D26V5, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           32                             28
  CLUS_2                           30                             43
  CLUS_3                           28                             33
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(19Q13.2) MUTATED       30     25     21     14
  AMP PEAK 26(19Q13.2) WILD-TYPE     28     22     28     26
D26V6, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           30                             28
  CLUS_2                           25                             22
  CLUS_3                           21                             28
  CLUS_4                           14                             26
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(19Q13.2) MUTATED       38     83     73     32
  AMP PEAK 26(19Q13.2) WILD-TYPE     72     62     80     46
D26V7, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           38                             72
  CLUS_2                           83                             62
  CLUS_3                           73                             80
  CLUS_4                           32                             46
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q13.2) MUTATED       80     94     52
  AMP PEAK 26(19Q13.2) WILD-TYPE    135     82     43
D26V8, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           80                            135
  CLUS_2                           94                             82
  CLUS_3                           52                             43
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(19Q13.2) MUTATED       70     63     53     36
  AMP PEAK 26(19Q13.2) WILD-TYPE     75     67     72     28
D26V9, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           70                             75
  CLUS_2                           63                             67
  CLUS_3                           53                             72
  CLUS_4                           36                             28
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q13.2) MUTATED       38     79    105
  AMP PEAK 26(19Q13.2) WILD-TYPE     33     84    125
D26V10, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           38                             33
  CLUS_2                           79                             84
  CLUS_3                          105                            125
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q13.2) MUTATED       69     45     41
  AMP PEAK 26(19Q13.2) WILD-TYPE     56     67     50
D26V11, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           69                             56
  CLUS_2                           45                             67
  CLUS_3                           41                             50
D26V12, binary
                                cls
clus                               0   1
  AMP PEAK 26(19Q13.2) MUTATED    76  79
  AMP PEAK 26(19Q13.2) WILD-TYPE 102  71
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 26(19Q13.2) MUTATED     76   79
  AMP PEAK 26(19Q13.2) WILD-TYPE  102   71
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           76                            102
  CLUS_2                           79                             71

Clustering(27) Variable = AMP PEAK 27(20P12.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(20P12.2) MUTATED       23     37      9     12
  AMP PEAK 27(20P12.2) WILD-TYPE     19     15     23     16
D27V1, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           23                             19
  CLUS_2                           37                             15
  CLUS_3                            9                             23
  CLUS_4                           12                             16
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(20P12.2) MUTATED        8     37     15     21
  AMP PEAK 27(20P12.2) WILD-TYPE     14     19      8     32
D27V2, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                            8                             14
  CLUS_2                           37                             19
  CLUS_3                           15                              8
  CLUS_4                           21                             32
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       76    119     78
  AMP PEAK 27(20P12.2) WILD-TYPE    117     43     57
D27V3, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           76                            117
  CLUS_2                          119                             43
  CLUS_3                           78                             57
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       67     82     54
  AMP PEAK 27(20P12.2) WILD-TYPE     75     32     46
D27V4, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           67                             75
  CLUS_2                           82                             32
  CLUS_3                           54                             46
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       31     40     34
  AMP PEAK 27(20P12.2) WILD-TYPE     29     33     27
D27V5, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           31                             29
  CLUS_2                           40                             33
  CLUS_3                           34                             27
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(20P12.2) MUTATED       28     29     29     19
  AMP PEAK 27(20P12.2) WILD-TYPE     30     18     20     21
D27V6, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           28                             30
  CLUS_2                           29                             18
  CLUS_3                           29                             20
  CLUS_4                           19                             21
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(20P12.2) MUTATED       53     99     80     40
  AMP PEAK 27(20P12.2) WILD-TYPE     57     46     73     38
D27V7, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           53                             57
  CLUS_2                           99                             46
  CLUS_3                           80                             73
  CLUS_4                           40                             38
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       97    118     57
  AMP PEAK 27(20P12.2) WILD-TYPE    118     58     38
D27V8, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           97                            118
  CLUS_2                          118                             58
  CLUS_3                           57                             38
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(20P12.2) MUTATED       66     83     68     41
  AMP PEAK 27(20P12.2) WILD-TYPE     79     47     57     23
D27V9, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           66                             79
  CLUS_2                           83                             47
  CLUS_3                           68                             57
  CLUS_4                           41                             23
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       44     93    121
  AMP PEAK 27(20P12.2) WILD-TYPE     27     70    109
D27V10, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           44                             27
  CLUS_2                           93                             70
  CLUS_3                          121                            109
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       82     63     44
  AMP PEAK 27(20P12.2) WILD-TYPE     43     49     47
D27V11, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           82                             43
  CLUS_2                           63                             49
  CLUS_3                           44                             47
D27V12, binary
                                cls
clus                              0  1
  AMP PEAK 27(20P12.2) MUTATED   99 90
  AMP PEAK 27(20P12.2) WILD-TYPE 79 60
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 27(20P12.2) MUTATED     99   90
  AMP PEAK 27(20P12.2) WILD-TYPE   79   60
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           99                             79
  CLUS_2                           90                             60

Clustering(28) Variable = AMP PEAK 28(20Q11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(20Q11.21) MUTATED       26     30     17     18
  AMP PEAK 28(20Q11.21) WILD-TYPE     16     22     15     10
D28V1, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            26                              16
  CLUS_2                            30                              22
  CLUS_3                            17                              15
  CLUS_4                            18                              10
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(20Q11.21) MUTATED       13     31     15     32
  AMP PEAK 28(20Q11.21) WILD-TYPE      9     25      8     21
D28V2, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            13                               9
  CLUS_2                            31                              25
  CLUS_3                            15                               8
  CLUS_4                            32                              21
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.21) MUTATED       89    110     99
  AMP PEAK 28(20Q11.21) WILD-TYPE    104     52     36
D28V3, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            89                             104
  CLUS_2                           110                              52
  CLUS_3                            99                              36
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.21) MUTATED       73     81     63
  AMP PEAK 28(20Q11.21) WILD-TYPE     69     33     37
D28V4, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            73                              69
  CLUS_2                            81                              33
  CLUS_3                            63                              37
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.21) MUTATED       35     45     34
  AMP PEAK 28(20Q11.21) WILD-TYPE     25     28     27
D28V5, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            35                              25
  CLUS_2                            45                              28
  CLUS_3                            34                              27
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(20Q11.21) MUTATED       33     30     30     21
  AMP PEAK 28(20Q11.21) WILD-TYPE     25     17     19     19
D28V6, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            33                              25
  CLUS_2                            30                              17
  CLUS_3                            30                              19
  CLUS_4                            21                              19
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(20Q11.21) MUTATED       62     90     98     45
  AMP PEAK 28(20Q11.21) WILD-TYPE     48     55     55     33
D28V7, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            62                              48
  CLUS_2                            90                              55
  CLUS_3                            98                              55
  CLUS_4                            45                              33
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.21) MUTATED      123    110     62
  AMP PEAK 28(20Q11.21) WILD-TYPE     92     66     33
D28V8, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                           123                              92
  CLUS_2                           110                              66
  CLUS_3                            62                              33
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(20Q11.21) MUTATED       81     90     75     37
  AMP PEAK 28(20Q11.21) WILD-TYPE     64     40     50     27
D28V9, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            81                              64
  CLUS_2                            90                              40
  CLUS_3                            75                              50
  CLUS_4                            37                              27
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.21) MUTATED       39    111    133
  AMP PEAK 28(20Q11.21) WILD-TYPE     32     52     97
D28V10, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            39                              32
  CLUS_2                           111                              52
  CLUS_3                           133                              97
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.21) MUTATED       85     70     47
  AMP PEAK 28(20Q11.21) WILD-TYPE     40     42     44
D28V11, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            85                              40
  CLUS_2                            70                              42
  CLUS_3                            47                              44
D28V12, binary
                                 cls
clus                                0   1
  AMP PEAK 28(20Q11.21) MUTATED   108  94
  AMP PEAK 28(20Q11.21) WILD-TYPE  70  56
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  AMP PEAK 28(20Q11.21) MUTATED    108   94
  AMP PEAK 28(20Q11.21) WILD-TYPE   70   56
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                           108                              70
  CLUS_2                            94                              56

Clustering(29) Variable = AMP PEAK 29(22Q11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(22Q11.21) MUTATED       23     31     11     12
  AMP PEAK 29(22Q11.21) WILD-TYPE     19     21     21     16
D29V1, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            23                              19
  CLUS_2                            31                              21
  CLUS_3                            11                              21
  CLUS_4                            12                              16
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(22Q11.21) MUTATED        8     32     13     24
  AMP PEAK 29(22Q11.21) WILD-TYPE     14     24     10     29
D29V2, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                             8                              14
  CLUS_2                            32                              24
  CLUS_3                            13                              10
  CLUS_4                            24                              29
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(22Q11.21) MUTATED       77     98     78
  AMP PEAK 29(22Q11.21) WILD-TYPE    116     64     57
D29V3, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            77                             116
  CLUS_2                            98                              64
  CLUS_3                            78                              57
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(22Q11.21) MUTATED       59     73     57
  AMP PEAK 29(22Q11.21) WILD-TYPE     83     41     43
D29V4, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            59                              83
  CLUS_2                            73                              41
  CLUS_3                            57                              43
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(22Q11.21) MUTATED       30     40     31
  AMP PEAK 29(22Q11.21) WILD-TYPE     30     33     30
D29V5, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            30                              30
  CLUS_2                            40                              33
  CLUS_3                            31                              30
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(22Q11.21) MUTATED       26     26     28     21
  AMP PEAK 29(22Q11.21) WILD-TYPE     32     21     21     19
D29V6, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            26                              32
  CLUS_2                            26                              21
  CLUS_3                            28                              21
  CLUS_4                            21                              19
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(22Q11.21) MUTATED       53     97     71     30
  AMP PEAK 29(22Q11.21) WILD-TYPE     57     48     82     48
D29V7, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            53                              57
  CLUS_2                            97                              48
  CLUS_3                            71                              82
  CLUS_4                            30                              48
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(22Q11.21) MUTATED      101    105     45
  AMP PEAK 29(22Q11.21) WILD-TYPE    114     71     50
D29V8, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                           101                             114
  CLUS_2                           105                              71
  CLUS_3                            45                              50
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(22Q11.21) MUTATED       68     81     59     33
  AMP PEAK 29(22Q11.21) WILD-TYPE     77     49     66     31
D29V9, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            68                              77
  CLUS_2                            81                              49
  CLUS_3                            59                              66
  CLUS_4                            33                              31
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(22Q11.21) MUTATED       35     93    113
  AMP PEAK 29(22Q11.21) WILD-TYPE     36     70    117
D29V10, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            35                              36
  CLUS_2                            93                              70
  CLUS_3                           113                             117
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(22Q11.21) MUTATED       73     63     34
  AMP PEAK 29(22Q11.21) WILD-TYPE     52     49     57
D29V11, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            73                              52
  CLUS_2                            63                              49
  CLUS_3                            34                              57
D29V12, binary
                                 cls
clus                               0  1
  AMP PEAK 29(22Q11.21) MUTATED   88 82
  AMP PEAK 29(22Q11.21) WILD-TYPE 90 68
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  AMP PEAK 29(22Q11.21) MUTATED     88   82
  AMP PEAK 29(22Q11.21) WILD-TYPE   90   68
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            88                              90
  CLUS_2                            82                              68

Clustering(30) Variable = AMP PEAK 30(XQ28) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(XQ28) MUTATED       10     15      7      8
  AMP PEAK 30(XQ28) WILD-TYPE     32     37     25     20
D30V1, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        10                          32
  CLUS_2                        15                          37
  CLUS_3                         7                          25
  CLUS_4                         8                          20
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(XQ28) MUTATED        4     16      5     15
  AMP PEAK 30(XQ28) WILD-TYPE     18     40     18     38
D30V2, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                         4                          18
  CLUS_2                        16                          40
  CLUS_3                         5                          18
  CLUS_4                        15                          38
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(XQ28) MUTATED       37     52     33
  AMP PEAK 30(XQ28) WILD-TYPE    156    110    102
D30V3, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        37                         156
  CLUS_2                        52                         110
  CLUS_3                        33                         102
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(XQ28) MUTATED       27     37     24
  AMP PEAK 30(XQ28) WILD-TYPE    115     77     76
D30V4, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        27                         115
  CLUS_2                        37                          77
  CLUS_3                        24                          76
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(XQ28) MUTATED       14     26     10
  AMP PEAK 30(XQ28) WILD-TYPE     46     47     51
D30V5, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        14                          46
  CLUS_2                        26                          47
  CLUS_3                        10                          51
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(XQ28) MUTATED       11      9     19     11
  AMP PEAK 30(XQ28) WILD-TYPE     47     38     30     29
D30V6, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        11                          47
  CLUS_2                         9                          38
  CLUS_3                        19                          30
  CLUS_4                        11                          29
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(XQ28) MUTATED       20     46     35     18
  AMP PEAK 30(XQ28) WILD-TYPE     90     99    118     60
D30V7, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        20                          90
  CLUS_2                        46                          99
  CLUS_3                        35                         118
  CLUS_4                        18                          60
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(XQ28) MUTATED       46     51     22
  AMP PEAK 30(XQ28) WILD-TYPE    169    125     73
D30V8, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        46                         169
  CLUS_2                        51                         125
  CLUS_3                        22                          73
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(XQ28) MUTATED       36     44     19     18
  AMP PEAK 30(XQ28) WILD-TYPE    109     86    106     46
D30V9, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        36                         109
  CLUS_2                        44                          86
  CLUS_3                        19                         106
  CLUS_4                        18                          46
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(XQ28) MUTATED       23     48     46
  AMP PEAK 30(XQ28) WILD-TYPE     48    115    184
D30V10, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        23                          48
  CLUS_2                        48                         115
  CLUS_3                        46                         184
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(XQ28) MUTATED       39     21     21
  AMP PEAK 30(XQ28) WILD-TYPE     86     91     70
D30V11, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        39                          86
  CLUS_2                        21                          91
  CLUS_3                        21                          70
D30V12, binary
                             cls
clus                            0   1
  AMP PEAK 30(XQ28) MUTATED    34  47
  AMP PEAK 30(XQ28) WILD-TYPE 144 103
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK 30(XQ28) MUTATED     34   47
  AMP PEAK 30(XQ28) WILD-TYPE  144  103
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        34                         144
  CLUS_2                        47                         103

Clustering(31) Variable = DEL PEAK  1(1P36.32) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.32) MUTATED        9     39     14      8
  DEL PEAK  1(1P36.32) WILD-TYPE     33     13     18     20
D31V1, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                            9                             33
  CLUS_2                           39                             13
  CLUS_3                           14                             18
  CLUS_4                            8                             20
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.32) MUTATED        8     43      7     12
  DEL PEAK  1(1P36.32) WILD-TYPE     14     13     16     41
D31V2, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                            8                             14
  CLUS_2                           43                             13
  CLUS_3                            7                             16
  CLUS_4                           12                             41
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       51    134     28
  DEL PEAK  1(1P36.32) WILD-TYPE    142     28    107
D31V3, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           51                            142
  CLUS_2                          134                             28
  CLUS_3                           28                            107
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       26     85     38
  DEL PEAK  1(1P36.32) WILD-TYPE    116     29     62
D31V4, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           26                            116
  CLUS_2                           85                             29
  CLUS_3                           38                             62
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       29     27     28
  DEL PEAK  1(1P36.32) WILD-TYPE     31     46     33
D31V5, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           29                             31
  CLUS_2                           27                             46
  CLUS_3                           28                             33
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.32) MUTATED       23     30     17     14
  DEL PEAK  1(1P36.32) WILD-TYPE     35     17     32     26
D31V6, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           23                             35
  CLUS_2                           30                             17
  CLUS_3                           17                             32
  CLUS_4                           14                             26
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.32) MUTATED       31    112     45     24
  DEL PEAK  1(1P36.32) WILD-TYPE     79     33    108     54
D31V7, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           31                             79
  CLUS_2                          112                             33
  CLUS_3                           45                            108
  CLUS_4                           24                             54
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       51    132     29
  DEL PEAK  1(1P36.32) WILD-TYPE    164     44     66
D31V8, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           51                            164
  CLUS_2                          132                             44
  CLUS_3                           29                             66
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.32) MUTATED       60     62     35     44
  DEL PEAK  1(1P36.32) WILD-TYPE     85     68     90     20
D31V9, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           60                             85
  CLUS_2                           62                             68
  CLUS_3                           35                             90
  CLUS_4                           44                             20
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       50     66     85
  DEL PEAK  1(1P36.32) WILD-TYPE     21     97    145
D31V10, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           50                             21
  CLUS_2                           66                             97
  CLUS_3                           85                            145
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       67     35     36
  DEL PEAK  1(1P36.32) WILD-TYPE     58     77     55
D31V11, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           67                             58
  CLUS_2                           35                             77
  CLUS_3                           36                             55
D31V12, binary
                                cls
clus                               0   1
  DEL PEAK  1(1P36.32) MUTATED    52  86
  DEL PEAK  1(1P36.32) WILD-TYPE 126  64
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK  1(1P36.32) MUTATED     52   86
  DEL PEAK  1(1P36.32) WILD-TYPE  126   64
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           52                            126
  CLUS_2                           86                             64

Clustering(32) Variable = DEL PEAK  2(1P13.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.1) MUTATED       17     37      9      9
  DEL PEAK  2(1P13.1) WILD-TYPE     25     15     23     19
D32V1, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          17                            25
  CLUS_2                          37                            15
  CLUS_3                           9                            23
  CLUS_4                           9                            19
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.1) MUTATED        9     39     12     12
  DEL PEAK  2(1P13.1) WILD-TYPE     13     17     11     41
D32V2, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                           9                            13
  CLUS_2                          39                            17
  CLUS_3                          12                            11
  CLUS_4                          12                            41
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       52    119     41
  DEL PEAK  2(1P13.1) WILD-TYPE    141     43     94
D32V3, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          52                           141
  CLUS_2                         119                            43
  CLUS_3                          41                            94
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       36     78     34
  DEL PEAK  2(1P13.1) WILD-TYPE    106     36     66
D32V4, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          36                           106
  CLUS_2                          78                            36
  CLUS_3                          34                            66
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       34     26     24
  DEL PEAK  2(1P13.1) WILD-TYPE     26     47     37
D32V5, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          34                            26
  CLUS_2                          26                            47
  CLUS_3                          24                            37
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.1) MUTATED       26     27     19     12
  DEL PEAK  2(1P13.1) WILD-TYPE     32     20     30     28
D32V6, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          26                            32
  CLUS_2                          27                            20
  CLUS_3                          19                            30
  CLUS_4                          12                            28
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.1) MUTATED       34    100     53     24
  DEL PEAK  2(1P13.1) WILD-TYPE     76     45    100     54
D32V7, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          34                            76
  CLUS_2                         100                            45
  CLUS_3                          53                           100
  CLUS_4                          24                            54
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       56    115     40
  DEL PEAK  2(1P13.1) WILD-TYPE    159     61     55
D32V8, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          56                           159
  CLUS_2                         115                            61
  CLUS_3                          40                            55
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.1) MUTATED       66     61     30     44
  DEL PEAK  2(1P13.1) WILD-TYPE     79     69     95     20
D32V9, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          66                            79
  CLUS_2                          61                            69
  CLUS_3                          30                            95
  CLUS_4                          44                            20
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       51     63     87
  DEL PEAK  2(1P13.1) WILD-TYPE     20    100    143
D32V10, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          51                            20
  CLUS_2                          63                           100
  CLUS_3                          87                           143
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       65     38     33
  DEL PEAK  2(1P13.1) WILD-TYPE     60     74     58
D32V11, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          65                            60
  CLUS_2                          38                            74
  CLUS_3                          33                            58
D32V12, binary
                               cls
clus                              0   1
  DEL PEAK  2(1P13.1) MUTATED    54  82
  DEL PEAK  2(1P13.1) WILD-TYPE 124  68
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  2(1P13.1) MUTATED     54   82
  DEL PEAK  2(1P13.1) WILD-TYPE  124   68
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          54                           124
  CLUS_2                          82                            68

Clustering(33) Variable = DEL PEAK  3(2P25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2P25.3) MUTATED        7      5      1      6
  DEL PEAK  3(2P25.3) WILD-TYPE     35     47     31     22
D33V1, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           7                            35
  CLUS_2                           5                            47
  CLUS_3                           1                            31
  CLUS_4                           6                            22
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2P25.3) MUTATED        6      5      5      3
  DEL PEAK  3(2P25.3) WILD-TYPE     16     51     18     50
D33V2, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           6                            16
  CLUS_2                           5                            51
  CLUS_3                           5                            18
  CLUS_4                           3                            50
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2P25.3) MUTATED       14     17     19
  DEL PEAK  3(2P25.3) WILD-TYPE    179    145    116
D33V3, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          14                           179
  CLUS_2                          17                           145
  CLUS_3                          19                           116
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2P25.3) MUTATED       11     11     13
  DEL PEAK  3(2P25.3) WILD-TYPE    131    103     87
D33V4, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          11                           131
  CLUS_2                          11                           103
  CLUS_3                          13                            87
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2P25.3) MUTATED        8      7      3
  DEL PEAK  3(2P25.3) WILD-TYPE     52     66     58
D33V5, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           8                            52
  CLUS_2                           7                            66
  CLUS_3                           3                            58
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2P25.3) MUTATED        6      5      5      2
  DEL PEAK  3(2P25.3) WILD-TYPE     52     42     44     38
D33V6, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           6                            52
  CLUS_2                           5                            42
  CLUS_3                           5                            44
  CLUS_4                           2                            38
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2P25.3) MUTATED       10     13     21      6
  DEL PEAK  3(2P25.3) WILD-TYPE    100    132    132     72
D33V7, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          10                           100
  CLUS_2                          13                           132
  CLUS_3                          21                           132
  CLUS_4                           6                            72
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2P25.3) MUTATED       18     16     16
  DEL PEAK  3(2P25.3) WILD-TYPE    197    160     79
D33V8, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          18                           197
  CLUS_2                          16                           160
  CLUS_3                          16                            79
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2P25.3) MUTATED       21     16      5      6
  DEL PEAK  3(2P25.3) WILD-TYPE    124    114    120     58
D33V9, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          21                           124
  CLUS_2                          16                           114
  CLUS_3                           5                           120
  CLUS_4                           6                            58
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2P25.3) MUTATED        5     15     28
  DEL PEAK  3(2P25.3) WILD-TYPE     66    148    202
D33V10, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           5                            66
  CLUS_2                          15                           148
  CLUS_3                          28                           202
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2P25.3) MUTATED       17      6      6
  DEL PEAK  3(2P25.3) WILD-TYPE    108    106     85
D33V11, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          17                           108
  CLUS_2                           6                           106
  CLUS_3                           6                            85
D33V12, binary
                               cls
clus                              0   1
  DEL PEAK  3(2P25.3) MUTATED    12  17
  DEL PEAK  3(2P25.3) WILD-TYPE 166 133
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  3(2P25.3) MUTATED     12   17
  DEL PEAK  3(2P25.3) WILD-TYPE  166  133
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          12                           166
  CLUS_2                          17                           133

Clustering(34) Variable = DEL PEAK  4(2Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED       10     18      6     10
  DEL PEAK  4(2Q22.1) WILD-TYPE     32     34     26     18
D34V1, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          10                            32
  CLUS_2                          18                            34
  CLUS_3                           6                            26
  CLUS_4                          10                            18
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED        7     20      6     11
  DEL PEAK  4(2Q22.1) WILD-TYPE     15     36     17     42
D34V2, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                           7                            15
  CLUS_2                          20                            36
  CLUS_3                           6                            17
  CLUS_4                          11                            42
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       25     61     38
  DEL PEAK  4(2Q22.1) WILD-TYPE    168    101     97
D34V3, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          25                           168
  CLUS_2                          61                           101
  CLUS_3                          38                            97
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       19     39     27
  DEL PEAK  4(2Q22.1) WILD-TYPE    123     75     73
D34V4, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          19                           123
  CLUS_2                          39                            75
  CLUS_3                          27                            73
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       14     19     10
  DEL PEAK  4(2Q22.1) WILD-TYPE     46     54     51
D34V5, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          14                            46
  CLUS_2                          19                            54
  CLUS_3                          10                            51
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED       13     10     16      4
  DEL PEAK  4(2Q22.1) WILD-TYPE     45     37     33     36
D34V6, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          13                            45
  CLUS_2                          10                            37
  CLUS_3                          16                            33
  CLUS_4                           4                            36
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED       23     46     46      9
  DEL PEAK  4(2Q22.1) WILD-TYPE     87     99    107     69
D34V7, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          23                            87
  CLUS_2                          46                            99
  CLUS_3                          46                           107
  CLUS_4                           9                            69
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       38     54     32
  DEL PEAK  4(2Q22.1) WILD-TYPE    177    122     63
D34V8, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          38                           177
  CLUS_2                          54                           122
  CLUS_3                          32                            63
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED       48     35     15     22
  DEL PEAK  4(2Q22.1) WILD-TYPE     97     95    110     42
D34V9, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          48                            97
  CLUS_2                          35                            95
  CLUS_3                          15                           110
  CLUS_4                          22                            42
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       26     33     61
  DEL PEAK  4(2Q22.1) WILD-TYPE     45    130    169
D34V10, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          26                            45
  CLUS_2                          33                           130
  CLUS_3                          61                           169
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       46     21     13
  DEL PEAK  4(2Q22.1) WILD-TYPE     79     91     78
D34V11, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          46                            79
  CLUS_2                          21                            91
  CLUS_3                          13                            78
D34V12, binary
                               cls
clus                              0   1
  DEL PEAK  4(2Q22.1) MUTATED    34  46
  DEL PEAK  4(2Q22.1) WILD-TYPE 144 104
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  4(2Q22.1) MUTATED     34   46
  DEL PEAK  4(2Q22.1) WILD-TYPE  144  104
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          34                           144
  CLUS_2                          46                           104

Clustering(35) Variable = DEL PEAK  5(2Q37.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q37.1) MUTATED        7     26      7     10
  DEL PEAK  5(2Q37.1) WILD-TYPE     35     26     25     18
D35V1, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                           7                            35
  CLUS_2                          26                            26
  CLUS_3                           7                            25
  CLUS_4                          10                            18
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q37.1) MUTATED        4     29      6     11
  DEL PEAK  5(2Q37.1) WILD-TYPE     18     27     17     42
D35V2, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                           4                            18
  CLUS_2                          29                            27
  CLUS_3                           6                            17
  CLUS_4                          11                            42
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       36     82     37
  DEL PEAK  5(2Q37.1) WILD-TYPE    157     80     98
D35V3, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          36                           157
  CLUS_2                          82                            80
  CLUS_3                          37                            98
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       25     55     36
  DEL PEAK  5(2Q37.1) WILD-TYPE    117     59     64
D35V4, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          25                           117
  CLUS_2                          55                            59
  CLUS_3                          36                            64
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       22     19     17
  DEL PEAK  5(2Q37.1) WILD-TYPE     38     54     44
D35V5, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          22                            38
  CLUS_2                          19                            54
  CLUS_3                          17                            44
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q37.1) MUTATED       16     18     11     13
  DEL PEAK  5(2Q37.1) WILD-TYPE     42     29     38     27
D35V6, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          16                            42
  CLUS_2                          18                            29
  CLUS_3                          11                            38
  CLUS_4                          13                            27
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q37.1) MUTATED       33     68     43     10
  DEL PEAK  5(2Q37.1) WILD-TYPE     77     77    110     68
D35V7, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          33                            77
  CLUS_2                          68                            77
  CLUS_3                          43                           110
  CLUS_4                          10                            68
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       48     78     28
  DEL PEAK  5(2Q37.1) WILD-TYPE    167     98     67
D35V8, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          48                           167
  CLUS_2                          78                            98
  CLUS_3                          28                            67
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q37.1) MUTATED       53     54     19     23
  DEL PEAK  5(2Q37.1) WILD-TYPE     92     76    106     41
D35V9, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          53                            92
  CLUS_2                          54                            76
  CLUS_3                          19                           106
  CLUS_4                          23                            41
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       26     50     73
  DEL PEAK  5(2Q37.1) WILD-TYPE     45    113    157
D35V10, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          26                            45
  CLUS_2                          50                           113
  CLUS_3                          73                           157
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       59     25     19
  DEL PEAK  5(2Q37.1) WILD-TYPE     66     87     72
D35V11, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          59                            66
  CLUS_2                          25                            87
  CLUS_3                          19                            72
D35V12, binary
                               cls
clus                              0   1
  DEL PEAK  5(2Q37.1) MUTATED    41  62
  DEL PEAK  5(2Q37.1) WILD-TYPE 137  88
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  5(2Q37.1) MUTATED     41   62
  DEL PEAK  5(2Q37.1) WILD-TYPE  137   88
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          41                           137
  CLUS_2                          62                            88

Clustering(36) Variable = DEL PEAK  6(3P25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P25.3) MUTATED       31     45     24     23
  DEL PEAK  6(3P25.3) WILD-TYPE     11      7      8      5
D36V1, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          31                            11
  CLUS_2                          45                             7
  CLUS_3                          24                             8
  CLUS_4                          23                             5
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P25.3) MUTATED       17     49     16     41
  DEL PEAK  6(3P25.3) WILD-TYPE      5      7      7     12
D36V2, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          17                             5
  CLUS_2                          49                             7
  CLUS_3                          16                             7
  CLUS_4                          41                            12
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED      144    141    104
  DEL PEAK  6(3P25.3) WILD-TYPE     49     21     31
D36V3, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                         144                            49
  CLUS_2                         141                            21
  CLUS_3                         104                            31
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED       99    100     84
  DEL PEAK  6(3P25.3) WILD-TYPE     43     14     16
D36V4, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          99                            43
  CLUS_2                         100                            14
  CLUS_3                          84                            16
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED       46     57     49
  DEL PEAK  6(3P25.3) WILD-TYPE     14     16     12
D36V5, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          46                            14
  CLUS_2                          57                            16
  CLUS_3                          49                            12
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P25.3) MUTATED       44     40     41     27
  DEL PEAK  6(3P25.3) WILD-TYPE     14      7      8     13
D36V6, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          44                            14
  CLUS_2                          40                             7
  CLUS_3                          41                             8
  CLUS_4                          27                            13
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P25.3) MUTATED       85    126    123     53
  DEL PEAK  6(3P25.3) WILD-TYPE     25     19     30     25
D36V7, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          85                            25
  CLUS_2                         126                            19
  CLUS_3                         123                            30
  CLUS_4                          53                            25
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED      154    152     81
  DEL PEAK  6(3P25.3) WILD-TYPE     61     24     14
D36V8, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                         154                            61
  CLUS_2                         152                            24
  CLUS_3                          81                            14
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P25.3) MUTATED      113    113     85     56
  DEL PEAK  6(3P25.3) WILD-TYPE     32     17     40      8
D36V9, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                         113                            32
  CLUS_2                         113                            17
  CLUS_3                          85                            40
  CLUS_4                          56                             8
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED       60    138    169
  DEL PEAK  6(3P25.3) WILD-TYPE     11     25     61
D36V10, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          60                            11
  CLUS_2                         138                            25
  CLUS_3                         169                            61
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED      106     86     67
  DEL PEAK  6(3P25.3) WILD-TYPE     19     26     24
D36V11, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                         106                            19
  CLUS_2                          86                            26
  CLUS_3                          67                            24
D36V12, binary
                               cls
clus                              0   1
  DEL PEAK  6(3P25.3) MUTATED   132 127
  DEL PEAK  6(3P25.3) WILD-TYPE  46  23
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  6(3P25.3) MUTATED    132  127
  DEL PEAK  6(3P25.3) WILD-TYPE   46   23
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                         132                            46
  CLUS_2                         127                            23

Clustering(37) Variable = DEL PEAK  7(3P13) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P13) MUTATED       38     46     24     25
  DEL PEAK  7(3P13) WILD-TYPE      4      6      8      3
D37V1, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        38                           4
  CLUS_2                        46                           6
  CLUS_3                        24                           8
  CLUS_4                        25                           3
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P13) MUTATED       19     50     19     45
  DEL PEAK  7(3P13) WILD-TYPE      3      6      4      8
D37V2, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        19                           3
  CLUS_2                        50                           6
  CLUS_3                        19                           4
  CLUS_4                        45                           8
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED      146    153    125
  DEL PEAK  7(3P13) WILD-TYPE     47      9     10
D37V3, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                       146                          47
  CLUS_2                       153                           9
  CLUS_3                       125                          10
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED      110    107     91
  DEL PEAK  7(3P13) WILD-TYPE     32      7      9
D37V4, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                       110                          32
  CLUS_2                       107                           7
  CLUS_3                        91                           9
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED       53     63     51
  DEL PEAK  7(3P13) WILD-TYPE      7     10     10
D37V5, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        53                           7
  CLUS_2                        63                          10
  CLUS_3                        51                          10
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P13) MUTATED       51     43     45     28
  DEL PEAK  7(3P13) WILD-TYPE      7      4      4     12
D37V6, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        51                           7
  CLUS_2                        43                           4
  CLUS_3                        45                           4
  CLUS_4                        28                          12
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P13) MUTATED       98    133    133     57
  DEL PEAK  7(3P13) WILD-TYPE     12     12     20     21
D37V7, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        98                          12
  CLUS_2                       133                          12
  CLUS_3                       133                          20
  CLUS_4                        57                          21
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED      170    163     88
  DEL PEAK  7(3P13) WILD-TYPE     45     13      7
D37V8, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                       170                          45
  CLUS_2                       163                          13
  CLUS_3                        88                           7
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P13) MUTATED      129    120     92     60
  DEL PEAK  7(3P13) WILD-TYPE     16     10     33      4
D37V9, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                       129                          16
  CLUS_2                       120                          10
  CLUS_3                        92                          33
  CLUS_4                        60                           4
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED       62    150    189
  DEL PEAK  7(3P13) WILD-TYPE      9     13     41
D37V10, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        62                           9
  CLUS_2                       150                          13
  CLUS_3                       189                          41
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED      118     95     71
  DEL PEAK  7(3P13) WILD-TYPE      7     17     20
D37V11, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                       118                           7
  CLUS_2                        95                          17
  CLUS_3                        71                          20
D37V12, binary
                             cls
clus                            0   1
  DEL PEAK  7(3P13) MUTATED   143 141
  DEL PEAK  7(3P13) WILD-TYPE  35   9
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK  7(3P13) MUTATED    143  141
  DEL PEAK  7(3P13) WILD-TYPE   35    9
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                       143                          35
  CLUS_2                       141                           9

Clustering(38) Variable = DEL PEAK  8(3P12.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P12.3) MUTATED       38     45     23     25
  DEL PEAK  8(3P12.3) WILD-TYPE      4      7      9      3
D38V1, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          38                             4
  CLUS_2                          45                             7
  CLUS_3                          23                             9
  CLUS_4                          25                             3
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P12.3) MUTATED       19     49     19     44
  DEL PEAK  8(3P12.3) WILD-TYPE      3      7      4      9
D38V2, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          19                             3
  CLUS_2                          49                             7
  CLUS_3                          19                             4
  CLUS_4                          44                             9
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.3) MUTATED      142    150    121
  DEL PEAK  8(3P12.3) WILD-TYPE     51     12     14
D38V3, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                         142                            51
  CLUS_2                         150                            12
  CLUS_3                         121                            14
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.3) MUTATED      106    106     87
  DEL PEAK  8(3P12.3) WILD-TYPE     36      8     13
D38V4, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                         106                            36
  CLUS_2                         106                             8
  CLUS_3                          87                            13
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.3) MUTATED       51     61     51
  DEL PEAK  8(3P12.3) WILD-TYPE      9     12     10
D38V5, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          51                             9
  CLUS_2                          61                            12
  CLUS_3                          51                            10
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P12.3) MUTATED       48     42     45     28
  DEL PEAK  8(3P12.3) WILD-TYPE     10      5      4     12
D38V6, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          48                            10
  CLUS_2                          42                             5
  CLUS_3                          45                             4
  CLUS_4                          28                            12
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P12.3) MUTATED       96    129    130     55
  DEL PEAK  8(3P12.3) WILD-TYPE     14     16     23     23
D38V7, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          96                            14
  CLUS_2                         129                            16
  CLUS_3                         130                            23
  CLUS_4                          55                            23
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.3) MUTATED      165    157     88
  DEL PEAK  8(3P12.3) WILD-TYPE     50     19      7
D38V8, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                         165                            50
  CLUS_2                         157                            19
  CLUS_3                          88                             7
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P12.3) MUTATED      125    115     90     60
  DEL PEAK  8(3P12.3) WILD-TYPE     20     15     35      4
D38V9, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                         125                            20
  CLUS_2                         115                            15
  CLUS_3                          90                            35
  CLUS_4                          60                             4
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.3) MUTATED       62    144    184
  DEL PEAK  8(3P12.3) WILD-TYPE      9     19     46
D38V10, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          62                             9
  CLUS_2                         144                            19
  CLUS_3                         184                            46
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.3) MUTATED      114     92     70
  DEL PEAK  8(3P12.3) WILD-TYPE     11     20     21
D38V11, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                         114                            11
  CLUS_2                          92                            20
  CLUS_3                          70                            21
D38V12, binary
                               cls
clus                              0   1
  DEL PEAK  8(3P12.3) MUTATED   141 135
  DEL PEAK  8(3P12.3) WILD-TYPE  37  15
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  8(3P12.3) MUTATED    141  135
  DEL PEAK  8(3P12.3) WILD-TYPE   37   15
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                         141                            37
  CLUS_2                         135                            15

Clustering(39) Variable = DEL PEAK  9(3Q11.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3Q11.1) MUTATED        6      6      6      5
  DEL PEAK  9(3Q11.1) WILD-TYPE     36     46     26     23
D39V1, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           6                            36
  CLUS_2                           6                            46
  CLUS_3                           6                            26
  CLUS_4                           5                            23
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3Q11.1) MUTATED        5      7      4      7
  DEL PEAK  9(3Q11.1) WILD-TYPE     17     49     19     46
D39V2, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           5                            17
  CLUS_2                           7                            49
  CLUS_3                           4                            19
  CLUS_4                           7                            46
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED       33     29     15
  DEL PEAK  9(3Q11.1) WILD-TYPE    160    133    120
D39V3, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          33                           160
  CLUS_2                          29                           133
  CLUS_3                          15                           120
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED       22     19     15
  DEL PEAK  9(3Q11.1) WILD-TYPE    120     95     85
D39V4, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          22                           120
  CLUS_2                          19                            95
  CLUS_3                          15                            85
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED        9      8      7
  DEL PEAK  9(3Q11.1) WILD-TYPE     51     65     54
D39V5, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           9                            51
  CLUS_2                           8                            65
  CLUS_3                           7                            54
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3Q11.1) MUTATED        9      8      5      2
  DEL PEAK  9(3Q11.1) WILD-TYPE     49     39     44     38
D39V6, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           9                            49
  CLUS_2                           8                            39
  CLUS_3                           5                            44
  CLUS_4                           2                            38
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3Q11.1) MUTATED       20     25     22     10
  DEL PEAK  9(3Q11.1) WILD-TYPE     90    120    131     68
D39V7, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          20                            90
  CLUS_2                          25                           120
  CLUS_3                          22                           131
  CLUS_4                          10                            68
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED       25     36     16
  DEL PEAK  9(3Q11.1) WILD-TYPE    190    140     79
D39V8, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          25                           190
  CLUS_2                          36                           140
  CLUS_3                          16                            79
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3Q11.1) MUTATED       19     23     19     10
  DEL PEAK  9(3Q11.1) WILD-TYPE    126    107    106     54
D39V9, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          19                           126
  CLUS_2                          23                           107
  CLUS_3                          19                           106
  CLUS_4                          10                            54
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED       11     29     31
  DEL PEAK  9(3Q11.1) WILD-TYPE     60    134    199
D39V10, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          11                            60
  CLUS_2                          29                           134
  CLUS_3                          31                           199
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED       24     16     12
  DEL PEAK  9(3Q11.1) WILD-TYPE    101     96     79
D39V11, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          24                           101
  CLUS_2                          16                            96
  CLUS_3                          12                            79
D39V12, binary
                               cls
clus                              0   1
  DEL PEAK  9(3Q11.1) MUTATED    24  28
  DEL PEAK  9(3Q11.1) WILD-TYPE 154 122
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  9(3Q11.1) MUTATED     24   28
  DEL PEAK  9(3Q11.1) WILD-TYPE  154  122
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          24                           154
  CLUS_2                          28                           122

Clustering(40) Variable = DEL PEAK 10(4P15.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(4P15.2) MUTATED       31     41     12     13
  DEL PEAK 10(4P15.2) WILD-TYPE     11     11     20     15
D40V1, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          31                            11
  CLUS_2                          41                            11
  CLUS_3                          12                            20
  CLUS_4                          13                            15
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(4P15.2) MUTATED        9     44     16     28
  DEL PEAK 10(4P15.2) WILD-TYPE     13     12      7     25
D40V2, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                           9                            13
  CLUS_2                          44                            12
  CLUS_3                          16                             7
  CLUS_4                          28                            25
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4P15.2) MUTATED       93    131     83
  DEL PEAK 10(4P15.2) WILD-TYPE    100     31     52
D40V3, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          93                           100
  CLUS_2                         131                            31
  CLUS_3                          83                            52
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4P15.2) MUTATED       66     87     69
  DEL PEAK 10(4P15.2) WILD-TYPE     76     27     31
D40V4, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          66                            76
  CLUS_2                          87                            27
  CLUS_3                          69                            31
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4P15.2) MUTATED       43     50     40
  DEL PEAK 10(4P15.2) WILD-TYPE     17     23     21
D40V5, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          43                            17
  CLUS_2                          50                            23
  CLUS_3                          40                            21
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(4P15.2) MUTATED       36     35     40     22
  DEL PEAK 10(4P15.2) WILD-TYPE     22     12      9     18
D40V6, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          36                            22
  CLUS_2                          35                            12
  CLUS_3                          40                             9
  CLUS_4                          22                            18
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(4P15.2) MUTATED       72    110     82     42
  DEL PEAK 10(4P15.2) WILD-TYPE     38     35     71     36
D40V7, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          72                            38
  CLUS_2                         110                            35
  CLUS_3                          82                            71
  CLUS_4                          42                            36
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4P15.2) MUTATED      113    137     56
  DEL PEAK 10(4P15.2) WILD-TYPE    102     39     39
D40V8, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                         113                           102
  CLUS_2                         137                            39
  CLUS_3                          56                            39
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(4P15.2) MUTATED       99     91     61     43
  DEL PEAK 10(4P15.2) WILD-TYPE     46     39     64     21
D40V9, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          99                            46
  CLUS_2                          91                            39
  CLUS_3                          61                            64
  CLUS_4                          43                            21
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4P15.2) MUTATED       46    106    142
  DEL PEAK 10(4P15.2) WILD-TYPE     25     57     88
D40V10, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          46                            25
  CLUS_2                         106                            57
  CLUS_3                         142                            88
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4P15.2) MUTATED       94     63     49
  DEL PEAK 10(4P15.2) WILD-TYPE     31     49     42
D40V11, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          94                            31
  CLUS_2                          63                            49
  CLUS_3                          49                            42
D40V12, binary
                               cls
clus                              0   1
  DEL PEAK 10(4P15.2) MUTATED    97 109
  DEL PEAK 10(4P15.2) WILD-TYPE  81  41
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 10(4P15.2) MUTATED     97  109
  DEL PEAK 10(4P15.2) WILD-TYPE   81   41
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          97                            81
  CLUS_2                         109                            41

Clustering(41) Variable = DEL PEAK 11(4Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4Q22.1) MUTATED       29     38     11     16
  DEL PEAK 11(4Q22.1) WILD-TYPE     13     14     21     12
D41V1, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          29                            13
  CLUS_2                          38                            14
  CLUS_3                          11                            21
  CLUS_4                          16                            12
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4Q22.1) MUTATED       13     41     15     25
  DEL PEAK 11(4Q22.1) WILD-TYPE      9     15      8     28
D41V2, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          13                             9
  CLUS_2                          41                            15
  CLUS_3                          15                             8
  CLUS_4                          25                            28
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q22.1) MUTATED       86    119     73
  DEL PEAK 11(4Q22.1) WILD-TYPE    107     43     62
D41V3, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          86                           107
  CLUS_2                         119                            43
  CLUS_3                          73                            62
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q22.1) MUTATED       64     77     54
  DEL PEAK 11(4Q22.1) WILD-TYPE     78     37     46
D41V4, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          64                            78
  CLUS_2                          77                            37
  CLUS_3                          54                            46
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q22.1) MUTATED       42     38     37
  DEL PEAK 11(4Q22.1) WILD-TYPE     18     35     24
D41V5, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          42                            18
  CLUS_2                          38                            35
  CLUS_3                          37                            24
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4Q22.1) MUTATED       40     28     27     22
  DEL PEAK 11(4Q22.1) WILD-TYPE     18     19     22     18
D41V6, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          40                            18
  CLUS_2                          28                            19
  CLUS_3                          27                            22
  CLUS_4                          22                            18
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4Q22.1) MUTATED       60    102     82     32
  DEL PEAK 11(4Q22.1) WILD-TYPE     50     43     71     46
D41V7, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          60                            50
  CLUS_2                         102                            43
  CLUS_3                          82                            71
  CLUS_4                          32                            46
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q22.1) MUTATED      105    115     56
  DEL PEAK 11(4Q22.1) WILD-TYPE    110     61     39
D41V8, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                         105                           110
  CLUS_2                         115                            61
  CLUS_3                          56                            39
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4Q22.1) MUTATED       90     75     58     42
  DEL PEAK 11(4Q22.1) WILD-TYPE     55     55     67     22
D41V9, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          90                            55
  CLUS_2                          75                            55
  CLUS_3                          58                            67
  CLUS_4                          42                            22
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q22.1) MUTATED       48     97    120
  DEL PEAK 11(4Q22.1) WILD-TYPE     23     66    110
D41V10, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          48                            23
  CLUS_2                          97                            66
  CLUS_3                         120                           110
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q22.1) MUTATED       76     61     42
  DEL PEAK 11(4Q22.1) WILD-TYPE     49     51     49
D41V11, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          76                            49
  CLUS_2                          61                            51
  CLUS_3                          42                            49
D41V12, binary
                               cls
clus                             0  1
  DEL PEAK 11(4Q22.1) MUTATED   90 89
  DEL PEAK 11(4Q22.1) WILD-TYPE 88 61
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 11(4Q22.1) MUTATED     90   89
  DEL PEAK 11(4Q22.1) WILD-TYPE   88   61
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          90                            88
  CLUS_2                          89                            61

Clustering(42) Variable = DEL PEAK 12(4Q32.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q32.3) MUTATED       29     42     14     20
  DEL PEAK 12(4Q32.3) WILD-TYPE     13     10     18      8
D42V1, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          29                            13
  CLUS_2                          42                            10
  CLUS_3                          14                            18
  CLUS_4                          20                             8
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q32.3) MUTATED       16     45     16     28
  DEL PEAK 12(4Q32.3) WILD-TYPE      6     11      7     25
D42V2, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          16                             6
  CLUS_2                          45                            11
  CLUS_3                          16                             7
  CLUS_4                          28                            25
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q32.3) MUTATED      101    138     83
  DEL PEAK 12(4Q32.3) WILD-TYPE     92     24     52
D42V3, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                         101                            92
  CLUS_2                         138                            24
  CLUS_3                          83                            52
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q32.3) MUTATED       74     88     70
  DEL PEAK 12(4Q32.3) WILD-TYPE     68     26     30
D42V4, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          74                            68
  CLUS_2                          88                            26
  CLUS_3                          70                            30
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q32.3) MUTATED       45     41     37
  DEL PEAK 12(4Q32.3) WILD-TYPE     15     32     24
D42V5, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          45                            15
  CLUS_2                          41                            32
  CLUS_3                          37                            24
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q32.3) MUTATED       40     30     31     22
  DEL PEAK 12(4Q32.3) WILD-TYPE     18     17     18     18
D42V6, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          40                            18
  CLUS_2                          30                            17
  CLUS_3                          31                            18
  CLUS_4                          22                            18
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q32.3) MUTATED       71    117     94     38
  DEL PEAK 12(4Q32.3) WILD-TYPE     39     28     59     40
D42V7, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          71                            39
  CLUS_2                         117                            28
  CLUS_3                          94                            59
  CLUS_4                          38                            40
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q32.3) MUTATED      123    135     62
  DEL PEAK 12(4Q32.3) WILD-TYPE     92     41     33
D42V8, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                         123                            92
  CLUS_2                         135                            41
  CLUS_3                          62                            33
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q32.3) MUTATED       98     94     65     50
  DEL PEAK 12(4Q32.3) WILD-TYPE     47     36     60     14
D42V9, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          98                            47
  CLUS_2                          94                            36
  CLUS_3                          65                            60
  CLUS_4                          50                            14
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q32.3) MUTATED       49    121    137
  DEL PEAK 12(4Q32.3) WILD-TYPE     22     42     93
D42V10, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          49                            22
  CLUS_2                         121                            42
  CLUS_3                         137                            93
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q32.3) MUTATED       96     66     51
  DEL PEAK 12(4Q32.3) WILD-TYPE     29     46     40
D42V11, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          96                            29
  CLUS_2                          66                            46
  CLUS_3                          51                            40
D42V12, binary
                               cls
clus                              0   1
  DEL PEAK 12(4Q32.3) MUTATED    99 114
  DEL PEAK 12(4Q32.3) WILD-TYPE  79  36
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 12(4Q32.3) MUTATED     99  114
  DEL PEAK 12(4Q32.3) WILD-TYPE   79   36
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          99                            79
  CLUS_2                         114                            36

Clustering(43) Variable = DEL PEAK 13(4Q35.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q35.2) MUTATED       30     40     16     21
  DEL PEAK 13(4Q35.2) WILD-TYPE     12     12     16      7
D43V1, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          30                            12
  CLUS_2                          40                            12
  CLUS_3                          16                            16
  CLUS_4                          21                             7
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q35.2) MUTATED       16     43     15     33
  DEL PEAK 13(4Q35.2) WILD-TYPE      6     13      8     20
D43V2, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          16                             6
  CLUS_2                          43                            13
  CLUS_3                          15                             8
  CLUS_4                          33                            20
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q35.2) MUTATED      105    137     81
  DEL PEAK 13(4Q35.2) WILD-TYPE     88     25     54
D43V3, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                         105                            88
  CLUS_2                         137                            25
  CLUS_3                          81                            54
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q35.2) MUTATED       74     90     67
  DEL PEAK 13(4Q35.2) WILD-TYPE     68     24     33
D43V4, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          74                            68
  CLUS_2                          90                            24
  CLUS_3                          67                            33
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q35.2) MUTATED       43     44     38
  DEL PEAK 13(4Q35.2) WILD-TYPE     17     29     23
D43V5, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          43                            17
  CLUS_2                          44                            29
  CLUS_3                          38                            23
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q35.2) MUTATED       39     31     33     22
  DEL PEAK 13(4Q35.2) WILD-TYPE     19     16     16     18
D43V6, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          39                            19
  CLUS_2                          31                            16
  CLUS_3                          33                            16
  CLUS_4                          22                            18
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q35.2) MUTATED       69    117     97     38
  DEL PEAK 13(4Q35.2) WILD-TYPE     41     28     56     40
D43V7, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          69                            41
  CLUS_2                         117                            28
  CLUS_3                          97                            56
  CLUS_4                          38                            40
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q35.2) MUTATED      128    132     61
  DEL PEAK 13(4Q35.2) WILD-TYPE     87     44     34
D43V8, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                         128                            87
  CLUS_2                         132                            44
  CLUS_3                          61                            34
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q35.2) MUTATED       97     92     67     50
  DEL PEAK 13(4Q35.2) WILD-TYPE     48     38     58     14
D43V9, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          97                            48
  CLUS_2                          92                            38
  CLUS_3                          67                            58
  CLUS_4                          50                            14
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q35.2) MUTATED       52    117    137
  DEL PEAK 13(4Q35.2) WILD-TYPE     19     46     93
D43V10, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          52                            19
  CLUS_2                         117                            46
  CLUS_3                         137                            93
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q35.2) MUTATED       91     69     52
  DEL PEAK 13(4Q35.2) WILD-TYPE     34     43     39
D43V11, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          91                            34
  CLUS_2                          69                            43
  CLUS_3                          52                            39
D43V12, binary
                               cls
clus                              0   1
  DEL PEAK 13(4Q35.2) MUTATED   100 112
  DEL PEAK 13(4Q35.2) WILD-TYPE  78  38
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 13(4Q35.2) MUTATED    100  112
  DEL PEAK 13(4Q35.2) WILD-TYPE   78   38
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                         100                            78
  CLUS_2                         112                            38

Clustering(44) Variable = DEL PEAK 14(5Q11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q11.2) MUTATED       31     42     21     21
  DEL PEAK 14(5Q11.2) WILD-TYPE     11     10     11      7
D44V1, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          31                            11
  CLUS_2                          42                            10
  CLUS_3                          21                            11
  CLUS_4                          21                             7
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q11.2) MUTATED       14     45     16     40
  DEL PEAK 14(5Q11.2) WILD-TYPE      8     11      7     13
D44V2, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          14                             8
  CLUS_2                          45                            11
  CLUS_3                          16                             7
  CLUS_4                          40                            13
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q11.2) MUTATED      106    134    120
  DEL PEAK 14(5Q11.2) WILD-TYPE     87     28     15
D44V3, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                         106                            87
  CLUS_2                         134                            28
  CLUS_3                         120                            15
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q11.2) MUTATED       84     92     83
  DEL PEAK 14(5Q11.2) WILD-TYPE     58     22     17
D44V4, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          84                            58
  CLUS_2                          92                            22
  CLUS_3                          83                            17
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q11.2) MUTATED       44     53     45
  DEL PEAK 14(5Q11.2) WILD-TYPE     16     20     16
D44V5, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          44                            16
  CLUS_2                          53                            20
  CLUS_3                          45                            16
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q11.2) MUTATED       37     37     38     30
  DEL PEAK 14(5Q11.2) WILD-TYPE     21     10     11     10
D44V6, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          37                            21
  CLUS_2                          37                            10
  CLUS_3                          38                            11
  CLUS_4                          30                            10
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q11.2) MUTATED       75    120    115     47
  DEL PEAK 14(5Q11.2) WILD-TYPE     35     25     38     31
D44V7, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          75                            35
  CLUS_2                         120                            25
  CLUS_3                         115                            38
  CLUS_4                          47                            31
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q11.2) MUTATED      145    142     70
  DEL PEAK 14(5Q11.2) WILD-TYPE     70     34     25
D44V8, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                         145                            70
  CLUS_2                         142                            34
  CLUS_3                          70                            25
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q11.2) MUTATED      109    103     80     52
  DEL PEAK 14(5Q11.2) WILD-TYPE     36     27     45     12
D44V9, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                         109                            36
  CLUS_2                         103                            27
  CLUS_3                          80                            45
  CLUS_4                          52                            12
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q11.2) MUTATED       55    139    150
  DEL PEAK 14(5Q11.2) WILD-TYPE     16     24     80
D44V10, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          55                            16
  CLUS_2                         139                            24
  CLUS_3                         150                            80
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q11.2) MUTATED      104     79     56
  DEL PEAK 14(5Q11.2) WILD-TYPE     21     33     35
D44V11, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                         104                            21
  CLUS_2                          79                            33
  CLUS_3                          56                            35
D44V12, binary
                               cls
clus                              0   1
  DEL PEAK 14(5Q11.2) MUTATED   117 122
  DEL PEAK 14(5Q11.2) WILD-TYPE  61  28
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 14(5Q11.2) MUTATED    117  122
  DEL PEAK 14(5Q11.2) WILD-TYPE   61   28
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                         117                            61
  CLUS_2                         122                            28

Clustering(45) Variable = DEL PEAK 15(6P25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED        8     17      6      5
  DEL PEAK 15(6P25.3) WILD-TYPE     34     35     26     23
D45V1, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                           8                            34
  CLUS_2                          17                            35
  CLUS_3                           6                            26
  CLUS_4                           5                            23
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED        2     18      2     14
  DEL PEAK 15(6P25.3) WILD-TYPE     20     38     21     39
D45V2, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                           2                            20
  CLUS_2                          18                            38
  CLUS_3                           2                            21
  CLUS_4                          14                            39
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       41     64     23
  DEL PEAK 15(6P25.3) WILD-TYPE    152     98    112
D45V3, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          41                           152
  CLUS_2                          64                            98
  CLUS_3                          23                           112
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       25     49     24
  DEL PEAK 15(6P25.3) WILD-TYPE    117     65     76
D45V4, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          25                           117
  CLUS_2                          49                            65
  CLUS_3                          24                            76
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       14     22     12
  DEL PEAK 15(6P25.3) WILD-TYPE     46     51     49
D45V5, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          14                            46
  CLUS_2                          22                            51
  CLUS_3                          12                            49
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED       15      4     16     13
  DEL PEAK 15(6P25.3) WILD-TYPE     43     43     33     27
D45V6, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          15                            43
  CLUS_2                           4                            43
  CLUS_3                          16                            33
  CLUS_4                          13                            27
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED       28     62     22     15
  DEL PEAK 15(6P25.3) WILD-TYPE     82     83    131     63
D45V7, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          28                            82
  CLUS_2                          62                            83
  CLUS_3                          22                           131
  CLUS_4                          15                            63
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       41     74     12
  DEL PEAK 15(6P25.3) WILD-TYPE    174    102     83
D45V8, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          41                           174
  CLUS_2                          74                           102
  CLUS_3                          12                            83
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED       36     35     26     25
  DEL PEAK 15(6P25.3) WILD-TYPE    109     95     99     39
D45V9, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          36                           109
  CLUS_2                          35                            95
  CLUS_3                          26                            99
  CLUS_4                          25                            39
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       30     37     55
  DEL PEAK 15(6P25.3) WILD-TYPE     41    126    175
D45V10, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          30                            41
  CLUS_2                          37                           126
  CLUS_3                          55                           175
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       42     28     18
  DEL PEAK 15(6P25.3) WILD-TYPE     83     84     73
D45V11, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          42                            83
  CLUS_2                          28                            84
  CLUS_3                          18                            73
D45V12, binary
                               cls
clus                              0   1
  DEL PEAK 15(6P25.3) MUTATED    37  51
  DEL PEAK 15(6P25.3) WILD-TYPE 141  99
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 15(6P25.3) MUTATED     37   51
  DEL PEAK 15(6P25.3) WILD-TYPE  141   99
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          37                           141
  CLUS_2                          51                            99

Clustering(46) Variable = DEL PEAK 16(6Q22.31) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q22.31) MUTATED        8     20      4      6
  DEL PEAK 16(6Q22.31) WILD-TYPE     34     32     28     22
D46V1, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                            8                             34
  CLUS_2                           20                             32
  CLUS_3                            4                             28
  CLUS_4                            6                             22
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q22.31) MUTATED        4     22      4      8
  DEL PEAK 16(6Q22.31) WILD-TYPE     18     34     19     45
D46V2, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                            4                             18
  CLUS_2                           22                             34
  CLUS_3                            4                             19
  CLUS_4                            8                             45
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q22.31) MUTATED       33     59     26
  DEL PEAK 16(6Q22.31) WILD-TYPE    160    103    109
D46V3, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           33                            160
  CLUS_2                           59                            103
  CLUS_3                           26                            109
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q22.31) MUTATED       26     42     20
  DEL PEAK 16(6Q22.31) WILD-TYPE    116     72     80
D46V4, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           26                            116
  CLUS_2                           42                             72
  CLUS_3                           20                             80
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q22.31) MUTATED       17     20     12
  DEL PEAK 16(6Q22.31) WILD-TYPE     43     53     49
D46V5, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           17                             43
  CLUS_2                           20                             53
  CLUS_3                           12                             49
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q22.31) MUTATED       17      8     16      8
  DEL PEAK 16(6Q22.31) WILD-TYPE     41     39     33     32
D46V6, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           17                             41
  CLUS_2                            8                             39
  CLUS_3                           16                             33
  CLUS_4                            8                             32
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q22.31) MUTATED       21     53     26     17
  DEL PEAK 16(6Q22.31) WILD-TYPE     89     92    127     61
D46V7, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           21                             89
  CLUS_2                           53                             92
  CLUS_3                           26                            127
  CLUS_4                           17                             61
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q22.31) MUTATED       45     58     14
  DEL PEAK 16(6Q22.31) WILD-TYPE    170    118     81
D46V8, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           45                            170
  CLUS_2                           58                            118
  CLUS_3                           14                             81
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q22.31) MUTATED       42     35     21     13
  DEL PEAK 16(6Q22.31) WILD-TYPE    103     95    104     51
D46V9, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           42                            103
  CLUS_2                           35                             95
  CLUS_3                           21                            104
  CLUS_4                           13                             51
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q22.31) MUTATED       25     33     53
  DEL PEAK 16(6Q22.31) WILD-TYPE     46    130    177
D46V10, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           25                             46
  CLUS_2                           33                            130
  CLUS_3                           53                            177
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q22.31) MUTATED       38     22     17
  DEL PEAK 16(6Q22.31) WILD-TYPE     87     90     74
D46V11, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           38                             87
  CLUS_2                           22                             90
  CLUS_3                           17                             74
D46V12, binary
                                cls
clus                               0   1
  DEL PEAK 16(6Q22.31) MUTATED    34  43
  DEL PEAK 16(6Q22.31) WILD-TYPE 144 107
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 16(6Q22.31) MUTATED     34   43
  DEL PEAK 16(6Q22.31) WILD-TYPE  144  107
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           34                            144
  CLUS_2                           43                            107

Clustering(47) Variable = DEL PEAK 17(6Q26) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6Q26) MUTATED        8     21      5      6
  DEL PEAK 17(6Q26) WILD-TYPE     34     31     27     22
D47V1, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                         8                          34
  CLUS_2                        21                          31
  CLUS_3                         5                          27
  CLUS_4                         6                          22
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6Q26) MUTATED        4     23      5      8
  DEL PEAK 17(6Q26) WILD-TYPE     18     33     18     45
D47V2, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                         4                          18
  CLUS_2                        23                          33
  CLUS_3                         5                          18
  CLUS_4                         8                          45
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       34     64     32
  DEL PEAK 17(6Q26) WILD-TYPE    159     98    103
D47V3, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        34                         159
  CLUS_2                        64                          98
  CLUS_3                        32                         103
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       27     48     23
  DEL PEAK 17(6Q26) WILD-TYPE    115     66     77
D47V4, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        27                         115
  CLUS_2                        48                          66
  CLUS_3                        23                          77
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       19     21     17
  DEL PEAK 17(6Q26) WILD-TYPE     41     52     44
D47V5, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        19                          41
  CLUS_2                        21                          52
  CLUS_3                        17                          44
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6Q26) MUTATED       17     11     17     12
  DEL PEAK 17(6Q26) WILD-TYPE     41     36     32     28
D47V6, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        17                          41
  CLUS_2                        11                          36
  CLUS_3                        17                          32
  CLUS_4                        12                          28
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6Q26) MUTATED       24     58     31     16
  DEL PEAK 17(6Q26) WILD-TYPE     86     87    122     62
D47V7, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        24                          86
  CLUS_2                        58                          87
  CLUS_3                        31                         122
  CLUS_4                        16                          62
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       45     65     19
  DEL PEAK 17(6Q26) WILD-TYPE    170    111     76
D47V8, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        45                         170
  CLUS_2                        65                         111
  CLUS_3                        19                          76
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6Q26) MUTATED       43     40     21     19
  DEL PEAK 17(6Q26) WILD-TYPE    102     90    104     45
D47V9, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        43                         102
  CLUS_2                        40                          90
  CLUS_3                        21                         104
  CLUS_4                        19                          45
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       28     38     57
  DEL PEAK 17(6Q26) WILD-TYPE     43    125    173
D47V10, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        28                          43
  CLUS_2                        38                         125
  CLUS_3                        57                         173
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       43     22     21
  DEL PEAK 17(6Q26) WILD-TYPE     82     90     70
D47V11, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        43                          82
  CLUS_2                        22                          90
  CLUS_3                        21                          70
D47V12, binary
                             cls
clus                            0   1
  DEL PEAK 17(6Q26) MUTATED    37  49
  DEL PEAK 17(6Q26) WILD-TYPE 141 101
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK 17(6Q26) MUTATED     37   49
  DEL PEAK 17(6Q26) WILD-TYPE  141  101
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        37                         141
  CLUS_2                        49                         101

Clustering(48) Variable = DEL PEAK 18(7Q11.22) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(7Q11.22) MUTATED        4      3      2      3
  DEL PEAK 18(7Q11.22) WILD-TYPE     38     49     30     25
D48V1, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                            4                             38
  CLUS_2                            3                             49
  CLUS_3                            2                             30
  CLUS_4                            3                             25
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(7Q11.22) MUTATED        4      3      3      2
  DEL PEAK 18(7Q11.22) WILD-TYPE     18     53     20     51
D48V2, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                            4                             18
  CLUS_2                            3                             53
  CLUS_3                            3                             20
  CLUS_4                            2                             51
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q11.22) MUTATED       13      9     25
  DEL PEAK 18(7Q11.22) WILD-TYPE    180    153    110
D48V3, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                           13                            180
  CLUS_2                            9                            153
  CLUS_3                           25                            110
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q11.22) MUTATED       16     10      9
  DEL PEAK 18(7Q11.22) WILD-TYPE    126    104     91
D48V4, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                           16                            126
  CLUS_2                           10                            104
  CLUS_3                            9                             91
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q11.22) MUTATED        8      8      6
  DEL PEAK 18(7Q11.22) WILD-TYPE     52     65     55
D48V5, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                            8                             52
  CLUS_2                            8                             65
  CLUS_3                            6                             55
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(7Q11.22) MUTATED        9      4      6      3
  DEL PEAK 18(7Q11.22) WILD-TYPE     49     43     43     37
D48V6, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                            9                             49
  CLUS_2                            4                             43
  CLUS_3                            6                             43
  CLUS_4                            3                             37
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(7Q11.22) MUTATED        6      8     27      6
  DEL PEAK 18(7Q11.22) WILD-TYPE    104    137    126     72
D48V7, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                            6                            104
  CLUS_2                            8                            137
  CLUS_3                           27                            126
  CLUS_4                            6                             72
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q11.22) MUTATED       18     13     16
  DEL PEAK 18(7Q11.22) WILD-TYPE    197    163     79
D48V8, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                           18                            197
  CLUS_2                           13                            163
  CLUS_3                           16                             79
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(7Q11.22) MUTATED       15     15      9      5
  DEL PEAK 18(7Q11.22) WILD-TYPE    130    115    116     59
D48V9, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                           15                            130
  CLUS_2                           15                            115
  CLUS_3                            9                            116
  CLUS_4                            5                             59
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q11.22) MUTATED        6     18     20
  DEL PEAK 18(7Q11.22) WILD-TYPE     65    145    210
D48V10, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                            6                             65
  CLUS_2                           18                            145
  CLUS_3                           20                            210
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q11.22) MUTATED       15     10     10
  DEL PEAK 18(7Q11.22) WILD-TYPE    110    102     81
D48V11, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                           15                            110
  CLUS_2                           10                            102
  CLUS_3                           10                             81
D48V12, binary
                                cls
clus                               0   1
  DEL PEAK 18(7Q11.22) MUTATED    18  17
  DEL PEAK 18(7Q11.22) WILD-TYPE 160 133
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 18(7Q11.22) MUTATED     18   17
  DEL PEAK 18(7Q11.22) WILD-TYPE  160  133
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                           18                            160
  CLUS_2                           17                            133

Clustering(49) Variable = DEL PEAK 19(7Q36.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(7Q36.3) MUTATED       12      6      8      5
  DEL PEAK 19(7Q36.3) WILD-TYPE     30     46     24     23
D49V1, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          12                            30
  CLUS_2                           6                            46
  CLUS_3                           8                            24
  CLUS_4                           5                            23
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(7Q36.3) MUTATED        6      6      5     14
  DEL PEAK 19(7Q36.3) WILD-TYPE     16     50     18     39
D49V2, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                           6                            16
  CLUS_2                           6                            50
  CLUS_3                           5                            18
  CLUS_4                          14                            39
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       41     21     41
  DEL PEAK 19(7Q36.3) WILD-TYPE    152    141     94
D49V3, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          41                           152
  CLUS_2                          21                           141
  CLUS_3                          41                            94
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       34     19     24
  DEL PEAK 19(7Q36.3) WILD-TYPE    108     95     76
D49V4, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          34                           108
  CLUS_2                          19                            95
  CLUS_3                          24                            76
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       13     15     12
  DEL PEAK 19(7Q36.3) WILD-TYPE     47     58     49
D49V5, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          13                            47
  CLUS_2                          15                            58
  CLUS_3                          12                            49
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(7Q36.3) MUTATED       17      8     10      5
  DEL PEAK 19(7Q36.3) WILD-TYPE     41     39     39     35
D49V6, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          17                            41
  CLUS_2                           8                            39
  CLUS_3                          10                            39
  CLUS_4                           5                            35
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(7Q36.3) MUTATED       26     18     48     11
  DEL PEAK 19(7Q36.3) WILD-TYPE     84    127    105     67
D49V7, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          26                            84
  CLUS_2                          18                           127
  CLUS_3                          48                           105
  CLUS_4                          11                            67
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       47     25     31
  DEL PEAK 19(7Q36.3) WILD-TYPE    168    151     64
D49V8, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          47                           168
  CLUS_2                          25                           151
  CLUS_3                          31                            64
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(7Q36.3) MUTATED       35     29     23      9
  DEL PEAK 19(7Q36.3) WILD-TYPE    110    101    102     55
D49V9, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          35                           110
  CLUS_2                          29                           101
  CLUS_3                          23                           102
  CLUS_4                           9                            55
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       11     36     49
  DEL PEAK 19(7Q36.3) WILD-TYPE     60    127    181
D49V10, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          11                            60
  CLUS_2                          36                           127
  CLUS_3                          49                           181
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       29     29     12
  DEL PEAK 19(7Q36.3) WILD-TYPE     96     83     79
D49V11, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          29                            96
  CLUS_2                          29                            83
  CLUS_3                          12                            79
D49V12, binary
                               cls
clus                              0   1
  DEL PEAK 19(7Q36.3) MUTATED    39  31
  DEL PEAK 19(7Q36.3) WILD-TYPE 139 119
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 19(7Q36.3) MUTATED     39   31
  DEL PEAK 19(7Q36.3) WILD-TYPE  139  119
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          39                           139
  CLUS_2                          31                           119

Clustering(50) Variable = DEL PEAK 20(8P23.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(8P23.2) MUTATED       28     39     22     17
  DEL PEAK 20(8P23.2) WILD-TYPE     14     13     10     11
D50V1, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          28                            14
  CLUS_2                          39                            13
  CLUS_3                          22                            10
  CLUS_4                          17                            11
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(8P23.2) MUTATED       16     40     14     36
  DEL PEAK 20(8P23.2) WILD-TYPE      6     16      9     17
D50V2, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          16                             6
  CLUS_2                          40                            16
  CLUS_3                          14                             9
  CLUS_4                          36                            17
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED      110    118    107
  DEL PEAK 20(8P23.2) WILD-TYPE     83     44     28
D50V3, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                         110                            83
  CLUS_2                         118                            44
  CLUS_3                         107                            28
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED       84     86     72
  DEL PEAK 20(8P23.2) WILD-TYPE     58     28     28
D50V4, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          84                            58
  CLUS_2                          86                            28
  CLUS_3                          72                            28
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED       45     54     38
  DEL PEAK 20(8P23.2) WILD-TYPE     15     19     23
D50V5, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          45                            15
  CLUS_2                          54                            19
  CLUS_3                          38                            23
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(8P23.2) MUTATED       42     34     39     22
  DEL PEAK 20(8P23.2) WILD-TYPE     16     13     10     18
D50V6, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          42                            16
  CLUS_2                          34                            13
  CLUS_3                          39                            10
  CLUS_4                          22                            18
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(8P23.2) MUTATED       72    109    104     47
  DEL PEAK 20(8P23.2) WILD-TYPE     38     36     49     31
D50V7, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          72                            38
  CLUS_2                         109                            36
  CLUS_3                         104                            49
  CLUS_4                          47                            31
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED      138    132     62
  DEL PEAK 20(8P23.2) WILD-TYPE     77     44     33
D50V8, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                         138                            77
  CLUS_2                         132                            44
  CLUS_3                          62                            33
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(8P23.2) MUTATED      100     96     76     46
  DEL PEAK 20(8P23.2) WILD-TYPE     45     34     49     18
D50V9, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                         100                            45
  CLUS_2                          96                            34
  CLUS_3                          76                            49
  CLUS_4                          46                            18
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED       49    120    149
  DEL PEAK 20(8P23.2) WILD-TYPE     22     43     81
D50V10, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          49                            22
  CLUS_2                         120                            43
  CLUS_3                         149                            81
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED       90     73     59
  DEL PEAK 20(8P23.2) WILD-TYPE     35     39     32
D50V11, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          90                            35
  CLUS_2                          73                            39
  CLUS_3                          59                            32
D50V12, binary
                               cls
clus                              0   1
  DEL PEAK 20(8P23.2) MUTATED   112 110
  DEL PEAK 20(8P23.2) WILD-TYPE  66  40
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 20(8P23.2) MUTATED    112  110
  DEL PEAK 20(8P23.2) WILD-TYPE   66   40
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                         112                            66
  CLUS_2                         110                            40

Clustering(51) Variable = DEL PEAK 21(9P23) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(9P23) MUTATED       36     30     19     16
  DEL PEAK 21(9P23) WILD-TYPE      6     22     13     12
D51V1, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        36                           6
  CLUS_2                        30                          22
  CLUS_3                        19                          13
  CLUS_4                        16                          12
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(9P23) MUTATED       11     30     19     41
  DEL PEAK 21(9P23) WILD-TYPE     11     26      4     12
D51V2, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        11                          11
  CLUS_2                        30                          26
  CLUS_3                        19                           4
  CLUS_4                        41                          12
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9P23) MUTATED      109     99    115
  DEL PEAK 21(9P23) WILD-TYPE     84     63     20
D51V3, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                       109                          84
  CLUS_2                        99                          63
  CLUS_3                       115                          20
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9P23) MUTATED       87     71     77
  DEL PEAK 21(9P23) WILD-TYPE     55     43     23
D51V4, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        87                          55
  CLUS_2                        71                          43
  CLUS_3                        77                          23
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9P23) MUTATED       33     48     43
  DEL PEAK 21(9P23) WILD-TYPE     27     25     18
D51V5, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        33                          27
  CLUS_2                        48                          25
  CLUS_3                        43                          18
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(9P23) MUTATED       31     33     34     26
  DEL PEAK 21(9P23) WILD-TYPE     27     14     15     14
D51V6, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        31                          27
  CLUS_2                        33                          14
  CLUS_3                        34                          15
  CLUS_4                        26                          14
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(9P23) MUTATED       86     81    111     42
  DEL PEAK 21(9P23) WILD-TYPE     24     64     42     36
D51V7, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        86                          24
  CLUS_2                        81                          64
  CLUS_3                       111                          42
  CLUS_4                        42                          36
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9P23) MUTATED      149    102     69
  DEL PEAK 21(9P23) WILD-TYPE     66     74     26
D51V8, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                       149                          66
  CLUS_2                       102                          74
  CLUS_3                        69                          26
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(9P23) MUTATED       94    103     71     40
  DEL PEAK 21(9P23) WILD-TYPE     51     27     54     24
D51V9, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        94                          51
  CLUS_2                       103                          27
  CLUS_3                        71                          54
  CLUS_4                        40                          24
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9P23) MUTATED       38    122    148
  DEL PEAK 21(9P23) WILD-TYPE     33     41     82
D51V10, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        38                          33
  CLUS_2                       122                          41
  CLUS_3                       148                          82
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9P23) MUTATED       87     82     49
  DEL PEAK 21(9P23) WILD-TYPE     38     30     42
D51V11, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        87                          38
  CLUS_2                        82                          30
  CLUS_3                        49                          42
D51V12, binary
                             cls
clus                            0   1
  DEL PEAK 21(9P23) MUTATED   118 100
  DEL PEAK 21(9P23) WILD-TYPE  60  50
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK 21(9P23) MUTATED    118  100
  DEL PEAK 21(9P23) WILD-TYPE   60   50
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                       118                          60
  CLUS_2                       100                          50

Clustering(52) Variable = DEL PEAK 22(9P21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(9P21.3) MUTATED       36     40     23     18
  DEL PEAK 22(9P21.3) WILD-TYPE      6     12      9     10
D52V1, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          36                             6
  CLUS_2                          40                            12
  CLUS_3                          23                             9
  CLUS_4                          18                            10
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(9P21.3) MUTATED       13     43     19     42
  DEL PEAK 22(9P21.3) WILD-TYPE      9     13      4     11
D52V2, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          13                             9
  CLUS_2                          43                            13
  CLUS_3                          19                             4
  CLUS_4                          42                            11
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P21.3) MUTATED      129    127    122
  DEL PEAK 22(9P21.3) WILD-TYPE     64     35     13
D52V3, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                         129                            64
  CLUS_2                         127                            35
  CLUS_3                         122                            13
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P21.3) MUTATED      106     88     83
  DEL PEAK 22(9P21.3) WILD-TYPE     36     26     17
D52V4, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                         106                            36
  CLUS_2                          88                            26
  CLUS_3                          83                            17
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P21.3) MUTATED       46     54     48
  DEL PEAK 22(9P21.3) WILD-TYPE     14     19     13
D52V5, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          46                            14
  CLUS_2                          54                            19
  CLUS_3                          48                            13
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(9P21.3) MUTATED       41     39     39     29
  DEL PEAK 22(9P21.3) WILD-TYPE     17      8     10     11
D52V6, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          41                            17
  CLUS_2                          39                             8
  CLUS_3                          39                            10
  CLUS_4                          29                            11
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(9P21.3) MUTATED       97    106    122     50
  DEL PEAK 22(9P21.3) WILD-TYPE     13     39     31     28
D52V7, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          97                            13
  CLUS_2                         106                            39
  CLUS_3                         122                            31
  CLUS_4                          50                            28
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P21.3) MUTATED      168    130     77
  DEL PEAK 22(9P21.3) WILD-TYPE     47     46     18
D52V8, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                         168                            47
  CLUS_2                         130                            46
  CLUS_3                          77                            18
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(9P21.3) MUTATED      109    109     92     52
  DEL PEAK 22(9P21.3) WILD-TYPE     36     21     33     12
D52V9, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                         109                            36
  CLUS_2                         109                            21
  CLUS_3                          92                            33
  CLUS_4                          52                            12
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P21.3) MUTATED       53    134    175
  DEL PEAK 22(9P21.3) WILD-TYPE     18     29     55
D52V10, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          53                            18
  CLUS_2                         134                            29
  CLUS_3                         175                            55
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P21.3) MUTATED       99     94     63
  DEL PEAK 22(9P21.3) WILD-TYPE     26     18     28
D52V11, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          99                            26
  CLUS_2                          94                            18
  CLUS_3                          63                            28
D52V12, binary
                               cls
clus                              0   1
  DEL PEAK 22(9P21.3) MUTATED   139 117
  DEL PEAK 22(9P21.3) WILD-TYPE  39  33
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 22(9P21.3) MUTATED    139  117
  DEL PEAK 22(9P21.3) WILD-TYPE   39   33
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                         139                            39
  CLUS_2                         117                            33

Clustering(53) Variable = DEL PEAK 23(9Q21.11) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9Q21.11) MUTATED       28     13     19     15
  DEL PEAK 23(9Q21.11) WILD-TYPE     14     39     13     13
D53V1, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           28                             14
  CLUS_2                           13                             39
  CLUS_3                           19                             13
  CLUS_4                           15                             13
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9Q21.11) MUTATED       14     14     17     30
  DEL PEAK 23(9Q21.11) WILD-TYPE      8     42      6     23
D53V2, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           14                              8
  CLUS_2                           14                             42
  CLUS_3                           17                              6
  CLUS_4                           30                             23
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9Q21.11) MUTATED      101     51     96
  DEL PEAK 23(9Q21.11) WILD-TYPE     92    111     39
D53V3, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                          101                             92
  CLUS_2                           51                            111
  CLUS_3                           96                             39
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9Q21.11) MUTATED       84     31     66
  DEL PEAK 23(9Q21.11) WILD-TYPE     58     83     34
D53V4, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           84                             58
  CLUS_2                           31                             83
  CLUS_3                           66                             34
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9Q21.11) MUTATED       29     38     26
  DEL PEAK 23(9Q21.11) WILD-TYPE     31     35     35
D53V5, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           29                             31
  CLUS_2                           38                             35
  CLUS_3                           26                             35
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9Q21.11) MUTATED       23     21     30     19
  DEL PEAK 23(9Q21.11) WILD-TYPE     35     26     19     21
D53V6, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           23                             35
  CLUS_2                           21                             26
  CLUS_3                           30                             19
  CLUS_4                           19                             21
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9Q21.11) MUTATED       71     34    101     40
  DEL PEAK 23(9Q21.11) WILD-TYPE     39    111     52     38
D53V7, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           71                             39
  CLUS_2                           34                            111
  CLUS_3                          101                             52
  CLUS_4                           40                             38
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9Q21.11) MUTATED      139     43     64
  DEL PEAK 23(9Q21.11) WILD-TYPE     76    133     31
D53V8, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                          139                             76
  CLUS_2                           43                            133
  CLUS_3                           64                             31
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9Q21.11) MUTATED       63     80     72     19
  DEL PEAK 23(9Q21.11) WILD-TYPE     82     50     53     45
D53V9, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           63                             82
  CLUS_2                           80                             50
  CLUS_3                           72                             53
  CLUS_4                           19                             45
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9Q21.11) MUTATED       18    106    110
  DEL PEAK 23(9Q21.11) WILD-TYPE     53     57    120
D53V10, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           18                             53
  CLUS_2                          106                             57
  CLUS_3                          110                            120
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9Q21.11) MUTATED       60     73     38
  DEL PEAK 23(9Q21.11) WILD-TYPE     65     39     53
D53V11, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           60                             65
  CLUS_2                           73                             39
  CLUS_3                           38                             53
D53V12, binary
                                cls
clus                               0   1
  DEL PEAK 23(9Q21.11) MUTATED   102  69
  DEL PEAK 23(9Q21.11) WILD-TYPE  76  81
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 23(9Q21.11) MUTATED    102   69
  DEL PEAK 23(9Q21.11) WILD-TYPE   76   81
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                          102                             76
  CLUS_2                           69                             81

Clustering(54) Variable = DEL PEAK 24(10P15.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P15.3) MUTATED       16     27     11     14
  DEL PEAK 24(10P15.3) WILD-TYPE     26     25     21     14
D54V1, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           16                             26
  CLUS_2                           27                             25
  CLUS_3                           11                             21
  CLUS_4                           14                             14
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P15.3) MUTATED       10     28     11     19
  DEL PEAK 24(10P15.3) WILD-TYPE     12     28     12     34
D54V2, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           10                             12
  CLUS_2                           28                             28
  CLUS_3                           11                             12
  CLUS_4                           19                             34
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       61    100     61
  DEL PEAK 24(10P15.3) WILD-TYPE    132     62     74
D54V3, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           61                            132
  CLUS_2                          100                             62
  CLUS_3                           61                             74
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       45     82     39
  DEL PEAK 24(10P15.3) WILD-TYPE     97     32     61
D54V4, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           45                             97
  CLUS_2                           82                             32
  CLUS_3                           39                             61
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       25     28     33
  DEL PEAK 24(10P15.3) WILD-TYPE     35     45     28
D54V5, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           25                             35
  CLUS_2                           28                             45
  CLUS_3                           33                             28
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P15.3) MUTATED       23     26     21     16
  DEL PEAK 24(10P15.3) WILD-TYPE     35     21     28     24
D54V6, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           23                             35
  CLUS_2                           26                             21
  CLUS_3                           21                             28
  CLUS_4                           16                             24
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P15.3) MUTATED       38     91     66     26
  DEL PEAK 24(10P15.3) WILD-TYPE     72     54     87     52
D54V7, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           38                             72
  CLUS_2                           91                             54
  CLUS_3                           66                             87
  CLUS_4                           26                             52
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       78    105     38
  DEL PEAK 24(10P15.3) WILD-TYPE    137     71     57
D54V8, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           78                            137
  CLUS_2                          105                             71
  CLUS_3                           38                             57
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P15.3) MUTATED       68     69     35     43
  DEL PEAK 24(10P15.3) WILD-TYPE     77     61     90     21
D54V9, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           68                             77
  CLUS_2                           69                             61
  CLUS_3                           35                             90
  CLUS_4                           43                             21
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       51     75     89
  DEL PEAK 24(10P15.3) WILD-TYPE     20     88    141
D54V10, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           51                             20
  CLUS_2                           75                             88
  CLUS_3                           89                            141
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       71     45     33
  DEL PEAK 24(10P15.3) WILD-TYPE     54     67     58
D54V11, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           71                             54
  CLUS_2                           45                             67
  CLUS_3                           33                             58
D54V12, binary
                                cls
clus                               0   1
  DEL PEAK 24(10P15.3) MUTATED    68  81
  DEL PEAK 24(10P15.3) WILD-TYPE 110  69
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 24(10P15.3) MUTATED     68   81
  DEL PEAK 24(10P15.3) WILD-TYPE  110   69
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           68                            110
  CLUS_2                           81                             69

Clustering(55) Variable = DEL PEAK 25(10P15.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10P15.1) MUTATED       15     27     10     15
  DEL PEAK 25(10P15.1) WILD-TYPE     27     25     22     13
D55V1, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           15                             27
  CLUS_2                           27                             25
  CLUS_3                           10                             22
  CLUS_4                           15                             13
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10P15.1) MUTATED       10     28     10     19
  DEL PEAK 25(10P15.1) WILD-TYPE     12     28     13     34
D55V2, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           10                             12
  CLUS_2                           28                             28
  CLUS_3                           10                             13
  CLUS_4                           19                             34
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P15.1) MUTATED       60     93     57
  DEL PEAK 25(10P15.1) WILD-TYPE    133     69     78
D55V3, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           60                            133
  CLUS_2                           93                             69
  CLUS_3                           57                             78
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P15.1) MUTATED       44     80     32
  DEL PEAK 25(10P15.1) WILD-TYPE     98     34     68
D55V4, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           44                             98
  CLUS_2                           80                             34
  CLUS_3                           32                             68
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P15.1) MUTATED       26     26     31
  DEL PEAK 25(10P15.1) WILD-TYPE     34     47     30
D55V5, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           26                             34
  CLUS_2                           26                             47
  CLUS_3                           31                             30
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10P15.1) MUTATED       24     25     19     15
  DEL PEAK 25(10P15.1) WILD-TYPE     34     22     30     25
D55V6, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           24                             34
  CLUS_2                           25                             22
  CLUS_3                           19                             30
  CLUS_4                           15                             25
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10P15.1) MUTATED       36     90     61     22
  DEL PEAK 25(10P15.1) WILD-TYPE     74     55     92     56
D55V7, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           36                             74
  CLUS_2                           90                             55
  CLUS_3                           61                             92
  CLUS_4                           22                             56
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P15.1) MUTATED       73    100     36
  DEL PEAK 25(10P15.1) WILD-TYPE    142     76     59
D55V8, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           73                            142
  CLUS_2                          100                             76
  CLUS_3                           36                             59
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10P15.1) MUTATED       66     63     31     43
  DEL PEAK 25(10P15.1) WILD-TYPE     79     67     94     21
D55V9, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           66                             79
  CLUS_2                           63                             67
  CLUS_3                           31                             94
  CLUS_4                           43                             21
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P15.1) MUTATED       50     72     81
  DEL PEAK 25(10P15.1) WILD-TYPE     21     91    149
D55V10, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           50                             21
  CLUS_2                           72                             91
  CLUS_3                           81                            149
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P15.1) MUTATED       63     42     32
  DEL PEAK 25(10P15.1) WILD-TYPE     62     70     59
D55V11, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           63                             62
  CLUS_2                           42                             70
  CLUS_3                           32                             59
D55V12, binary
                                cls
clus                               0   1
  DEL PEAK 25(10P15.1) MUTATED    61  76
  DEL PEAK 25(10P15.1) WILD-TYPE 117  74
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 25(10P15.1) MUTATED     61   76
  DEL PEAK 25(10P15.1) WILD-TYPE  117   74
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           61                            117
  CLUS_2                           76                             74

Clustering(56) Variable = DEL PEAK 26(10Q23.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(10Q23.31) MUTATED       17     38     13     13
  DEL PEAK 26(10Q23.31) WILD-TYPE     25     14     19     15
D56V1, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            17                              25
  CLUS_2                            38                              14
  CLUS_3                            13                              19
  CLUS_4                            13                              15
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(10Q23.31) MUTATED       11     40     10     20
  DEL PEAK 26(10Q23.31) WILD-TYPE     11     16     13     33
D56V2, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            11                              11
  CLUS_2                            40                              16
  CLUS_3                            10                              13
  CLUS_4                            20                              33
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q23.31) MUTATED       77    115     67
  DEL PEAK 26(10Q23.31) WILD-TYPE    116     47     68
D56V3, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            77                             116
  CLUS_2                           115                              47
  CLUS_3                            67                              68
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q23.31) MUTATED       52     84     53
  DEL PEAK 26(10Q23.31) WILD-TYPE     90     30     47
D56V4, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            52                              90
  CLUS_2                            84                              30
  CLUS_3                            53                              47
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q23.31) MUTATED       32     31     36
  DEL PEAK 26(10Q23.31) WILD-TYPE     28     42     25
D56V5, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            32                              28
  CLUS_2                            31                              42
  CLUS_3                            36                              25
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(10Q23.31) MUTATED       26     30     23     20
  DEL PEAK 26(10Q23.31) WILD-TYPE     32     17     26     20
D56V6, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            26                              32
  CLUS_2                            30                              17
  CLUS_3                            23                              26
  CLUS_4                            20                              20
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(10Q23.31) MUTATED       46    109     69     34
  DEL PEAK 26(10Q23.31) WILD-TYPE     64     36     84     44
D56V7, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            46                              64
  CLUS_2                           109                              36
  CLUS_3                            69                              84
  CLUS_4                            34                              44
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q23.31) MUTATED       82    126     50
  DEL PEAK 26(10Q23.31) WILD-TYPE    133     50     45
D56V8, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            82                             133
  CLUS_2                           126                              50
  CLUS_3                            50                              45
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(10Q23.31) MUTATED       68     79     53     45
  DEL PEAK 26(10Q23.31) WILD-TYPE     77     51     72     19
D56V9, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            68                              77
  CLUS_2                            79                              51
  CLUS_3                            53                              72
  CLUS_4                            45                              19
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q23.31) MUTATED       52     91    102
  DEL PEAK 26(10Q23.31) WILD-TYPE     19     72    128
D56V10, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            52                              19
  CLUS_2                            91                              72
  CLUS_3                           102                             128
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q23.31) MUTATED       88     46     39
  DEL PEAK 26(10Q23.31) WILD-TYPE     37     66     52
D56V11, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            88                              37
  CLUS_2                            46                              66
  CLUS_3                            39                              52
D56V12, binary
                                 cls
clus                               0  1
  DEL PEAK 26(10Q23.31) MUTATED   80 93
  DEL PEAK 26(10Q23.31) WILD-TYPE 98 57
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 26(10Q23.31) MUTATED     80   93
  DEL PEAK 26(10Q23.31) WILD-TYPE   98   57
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            80                              98
  CLUS_2                            93                              57

Clustering(57) Variable = DEL PEAK 27(11P15.5) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(11P15.5) MUTATED       30     21      9     18
  DEL PEAK 27(11P15.5) WILD-TYPE     12     31     23     10
D57V1, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           30                             12
  CLUS_2                           21                             31
  CLUS_3                            9                             23
  CLUS_4                           18                             10
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(11P15.5) MUTATED       14     22     16     26
  DEL PEAK 27(11P15.5) WILD-TYPE      8     34      7     27
D57V2, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           14                              8
  CLUS_2                           22                             34
  CLUS_3                           16                              7
  CLUS_4                           26                             27
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11P15.5) MUTATED       67     82     90
  DEL PEAK 27(11P15.5) WILD-TYPE    126     80     45
D57V3, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           67                            126
  CLUS_2                           82                             80
  CLUS_3                           90                             45
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11P15.5) MUTATED       55     55     60
  DEL PEAK 27(11P15.5) WILD-TYPE     87     59     40
D57V4, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           55                             87
  CLUS_2                           55                             59
  CLUS_3                           60                             40
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11P15.5) MUTATED       33     46     18
  DEL PEAK 27(11P15.5) WILD-TYPE     27     27     43
D57V5, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           33                             27
  CLUS_2                           46                             27
  CLUS_3                           18                             43
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(11P15.5) MUTATED       30     17     39     11
  DEL PEAK 27(11P15.5) WILD-TYPE     28     30     10     29
D57V6, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           30                             28
  CLUS_2                           17                             30
  CLUS_3                           39                             10
  CLUS_4                           11                             29
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(11P15.5) MUTATED       62     64     84     28
  DEL PEAK 27(11P15.5) WILD-TYPE     48     81     69     50
D57V7, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           62                             48
  CLUS_2                           64                             81
  CLUS_3                           84                             69
  CLUS_4                           28                             50
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11P15.5) MUTATED      108     78     52
  DEL PEAK 27(11P15.5) WILD-TYPE    107     98     43
D57V8, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                          108                            107
  CLUS_2                           78                             98
  CLUS_3                           52                             43
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(11P15.5) MUTATED       82     69     54     25
  DEL PEAK 27(11P15.5) WILD-TYPE     63     61     71     39
D57V9, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           82                             63
  CLUS_2                           69                             61
  CLUS_3                           54                             71
  CLUS_4                           25                             39
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11P15.5) MUTATED       30     82    118
  DEL PEAK 27(11P15.5) WILD-TYPE     41     81    112
D57V10, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           30                             41
  CLUS_2                           82                             81
  CLUS_3                          118                            112
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11P15.5) MUTATED       73     57     31
  DEL PEAK 27(11P15.5) WILD-TYPE     52     55     60
D57V11, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           73                             52
  CLUS_2                           57                             55
  CLUS_3                           31                             60
D57V12, binary
                                cls
clus                               0   1
  DEL PEAK 27(11P15.5) MUTATED    78  83
  DEL PEAK 27(11P15.5) WILD-TYPE 100  67
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 27(11P15.5) MUTATED     78   83
  DEL PEAK 27(11P15.5) WILD-TYPE  100   67
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           78                            100
  CLUS_2                           83                             67

Clustering(58) Variable = DEL PEAK 28(11Q22.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11Q22.1) MUTATED       10     18      8      6
  DEL PEAK 28(11Q22.1) WILD-TYPE     32     34     24     22
D58V1, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           10                             32
  CLUS_2                           18                             34
  CLUS_3                            8                             24
  CLUS_4                            6                             22
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11Q22.1) MUTATED        3     19      7     13
  DEL PEAK 28(11Q22.1) WILD-TYPE     19     37     16     40
D58V2, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                            3                             19
  CLUS_2                           19                             37
  CLUS_3                            7                             16
  CLUS_4                           13                             40
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11Q22.1) MUTATED       42     66     50
  DEL PEAK 28(11Q22.1) WILD-TYPE    151     96     85
D58V3, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           42                            151
  CLUS_2                           66                             96
  CLUS_3                           50                             85
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11Q22.1) MUTATED       32     48     43
  DEL PEAK 28(11Q22.1) WILD-TYPE    110     66     57
D58V4, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           32                            110
  CLUS_2                           48                             66
  CLUS_3                           43                             57
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11Q22.1) MUTATED       20     20     11
  DEL PEAK 28(11Q22.1) WILD-TYPE     40     53     50
D58V5, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           20                             40
  CLUS_2                           20                             53
  CLUS_3                           11                             50
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11Q22.1) MUTATED       16     11     14     10
  DEL PEAK 28(11Q22.1) WILD-TYPE     42     36     35     30
D58V6, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           16                             42
  CLUS_2                           11                             36
  CLUS_3                           14                             35
  CLUS_4                           10                             30
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11Q22.1) MUTATED       31     59     50     17
  DEL PEAK 28(11Q22.1) WILD-TYPE     79     86    103     61
D58V7, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           31                             79
  CLUS_2                           59                             86
  CLUS_3                           50                            103
  CLUS_4                           17                             61
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11Q22.1) MUTATED       51     69     37
  DEL PEAK 28(11Q22.1) WILD-TYPE    164    107     58
D58V8, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           51                            164
  CLUS_2                           69                            107
  CLUS_3                           37                             58
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11Q22.1) MUTATED       39     57     30     26
  DEL PEAK 28(11Q22.1) WILD-TYPE    106     73     95     38
D58V9, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           39                            106
  CLUS_2                           57                             73
  CLUS_3                           30                             95
  CLUS_4                           26                             38
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11Q22.1) MUTATED       27     51     74
  DEL PEAK 28(11Q22.1) WILD-TYPE     44    112    156
D58V10, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           27                             44
  CLUS_2                           51                            112
  CLUS_3                           74                            156
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11Q22.1) MUTATED       55     31     27
  DEL PEAK 28(11Q22.1) WILD-TYPE     70     81     64
D58V11, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           55                             70
  CLUS_2                           31                             81
  CLUS_3                           27                             64
D58V12, binary
                                cls
clus                               0   1
  DEL PEAK 28(11Q22.1) MUTATED    49  64
  DEL PEAK 28(11Q22.1) WILD-TYPE 129  86
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 28(11Q22.1) MUTATED     49   64
  DEL PEAK 28(11Q22.1) WILD-TYPE  129   86
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           49                            129
  CLUS_2                           64                             86

Clustering(59) Variable = DEL PEAK 29(11Q25) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11Q25) MUTATED       13     21     11      9
  DEL PEAK 29(11Q25) WILD-TYPE     29     31     21     19
D59V1, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         13                           29
  CLUS_2                         21                           31
  CLUS_3                         11                           21
  CLUS_4                          9                           19
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11Q25) MUTATED        5     22      8     19
  DEL PEAK 29(11Q25) WILD-TYPE     17     34     15     34
D59V2, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                          5                           17
  CLUS_2                         22                           34
  CLUS_3                          8                           15
  CLUS_4                         19                           34
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       54     75     53
  DEL PEAK 29(11Q25) WILD-TYPE    139     87     82
D59V3, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         54                          139
  CLUS_2                         75                           87
  CLUS_3                         53                           82
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       43     50     42
  DEL PEAK 29(11Q25) WILD-TYPE     99     64     58
D59V4, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         43                           99
  CLUS_2                         50                           64
  CLUS_3                         42                           58
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       25     22     16
  DEL PEAK 29(11Q25) WILD-TYPE     35     51     45
D59V5, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         25                           35
  CLUS_2                         22                           51
  CLUS_3                         16                           45
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11Q25) MUTATED       21     15     16     11
  DEL PEAK 29(11Q25) WILD-TYPE     37     32     33     29
D59V6, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         21                           37
  CLUS_2                         15                           32
  CLUS_3                         16                           33
  CLUS_4                         11                           29
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11Q25) MUTATED       34     64     63     20
  DEL PEAK 29(11Q25) WILD-TYPE     76     81     90     58
D59V7, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         34                           76
  CLUS_2                         64                           81
  CLUS_3                         63                           90
  CLUS_4                         20                           58
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       61     76     44
  DEL PEAK 29(11Q25) WILD-TYPE    154    100     51
D59V8, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         61                          154
  CLUS_2                         76                          100
  CLUS_3                         44                           51
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11Q25) MUTATED       43     61     39     27
  DEL PEAK 29(11Q25) WILD-TYPE    102     69     86     37
D59V9, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         43                          102
  CLUS_2                         61                           69
  CLUS_3                         39                           86
  CLUS_4                         27                           37
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       30     56     84
  DEL PEAK 29(11Q25) WILD-TYPE     41    107    146
D59V10, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         30                           41
  CLUS_2                         56                          107
  CLUS_3                         84                          146
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       58     38     29
  DEL PEAK 29(11Q25) WILD-TYPE     67     74     62
D59V11, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         58                           67
  CLUS_2                         38                           74
  CLUS_3                         29                           62
D59V12, binary
                              cls
clus                             0   1
  DEL PEAK 29(11Q25) MUTATED    57  68
  DEL PEAK 29(11Q25) WILD-TYPE 121  82
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 29(11Q25) MUTATED     57   68
  DEL PEAK 29(11Q25) WILD-TYPE  121   82
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         57                          121
  CLUS_2                         68                           82

Clustering(60) Variable = DEL PEAK 30(12Q24.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q24.31) MUTATED        5      9      4      4
  DEL PEAK 30(12Q24.31) WILD-TYPE     37     43     28     24
D60V1, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                             5                              37
  CLUS_2                             9                              43
  CLUS_3                             4                              28
  CLUS_4                             4                              24
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q24.31) MUTATED        3     10      4      5
  DEL PEAK 30(12Q24.31) WILD-TYPE     19     46     19     48
D60V2, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                             3                              19
  CLUS_2                            10                              46
  CLUS_3                             4                              19
  CLUS_4                             5                              48
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q24.31) MUTATED       33     33     19
  DEL PEAK 30(12Q24.31) WILD-TYPE    160    129    116
D60V3, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                            33                             160
  CLUS_2                            33                             129
  CLUS_3                            19                             116
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q24.31) MUTATED       21     20     23
  DEL PEAK 30(12Q24.31) WILD-TYPE    121     94     77
D60V4, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                            21                             121
  CLUS_2                            20                              94
  CLUS_3                            23                              77
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q24.31) MUTATED        5     10     12
  DEL PEAK 30(12Q24.31) WILD-TYPE     55     63     49
D60V5, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                             5                              55
  CLUS_2                            10                              63
  CLUS_3                            12                              49
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q24.31) MUTATED        4      8      9      6
  DEL PEAK 30(12Q24.31) WILD-TYPE     54     39     40     34
D60V6, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                             4                              54
  CLUS_2                             8                              39
  CLUS_3                             9                              40
  CLUS_4                             6                              34
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q24.31) MUTATED       22     27     25     11
  DEL PEAK 30(12Q24.31) WILD-TYPE     88    118    128     67
D60V7, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                            22                              88
  CLUS_2                            27                             118
  CLUS_3                            25                             128
  CLUS_4                            11                              67
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q24.31) MUTATED       36     35     14
  DEL PEAK 30(12Q24.31) WILD-TYPE    179    141     81
D60V8, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                            36                             179
  CLUS_2                            35                             141
  CLUS_3                            14                              81
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q24.31) MUTATED       20     25     21     14
  DEL PEAK 30(12Q24.31) WILD-TYPE    125    105    104     50
D60V9, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                            20                             125
  CLUS_2                            25                             105
  CLUS_3                            21                             104
  CLUS_4                            14                              50
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q24.31) MUTATED       10     38     32
  DEL PEAK 30(12Q24.31) WILD-TYPE     61    125    198
D60V10, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                            10                              61
  CLUS_2                            38                             125
  CLUS_3                            32                             198
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q24.31) MUTATED       28     21     14
  DEL PEAK 30(12Q24.31) WILD-TYPE     97     91     77
D60V11, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                            28                              97
  CLUS_2                            21                              91
  CLUS_3                            14                              77
D60V12, binary
                                 cls
clus                                0   1
  DEL PEAK 30(12Q24.31) MUTATED    34  29
  DEL PEAK 30(12Q24.31) WILD-TYPE 144 121
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 30(12Q24.31) MUTATED     34   29
  DEL PEAK 30(12Q24.31) WILD-TYPE  144  121
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                            34                             144
  CLUS_2                            29                             121

Clustering(61) Variable = DEL PEAK 31(13Q12.11) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(13Q12.11) MUTATED       25     36     25     14
  DEL PEAK 31(13Q12.11) WILD-TYPE     17     16      7     14
D61V1, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            25                              17
  CLUS_2                            36                              16
  CLUS_3                            25                               7
  CLUS_4                            14                              14
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(13Q12.11) MUTATED       12     39     13     36
  DEL PEAK 31(13Q12.11) WILD-TYPE     10     17     10     17
D61V2, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            12                              10
  CLUS_2                            39                              17
  CLUS_3                            13                              10
  CLUS_4                            36                              17
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED      115    106    105
  DEL PEAK 31(13Q12.11) WILD-TYPE     78     56     30
D61V3, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                           115                              78
  CLUS_2                           106                              56
  CLUS_3                           105                              30
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       85     78     72
  DEL PEAK 31(13Q12.11) WILD-TYPE     57     36     28
D61V4, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            85                              57
  CLUS_2                            78                              36
  CLUS_3                            72                              28
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       40     49     43
  DEL PEAK 31(13Q12.11) WILD-TYPE     20     24     18
D61V5, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            40                              20
  CLUS_2                            49                              24
  CLUS_3                            43                              18
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(13Q12.11) MUTATED       36     37     35     24
  DEL PEAK 31(13Q12.11) WILD-TYPE     22     10     14     16
D61V6, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            36                              22
  CLUS_2                            37                              10
  CLUS_3                            35                              14
  CLUS_4                            24                              16
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(13Q12.11) MUTATED       72    100     98     54
  DEL PEAK 31(13Q12.11) WILD-TYPE     38     45     55     24
D61V7, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            72                              38
  CLUS_2                           100                              45
  CLUS_3                            98                              55
  CLUS_4                            54                              24
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED      141    122     61
  DEL PEAK 31(13Q12.11) WILD-TYPE     74     54     34
D61V8, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                           141                              74
  CLUS_2                           122                              54
  CLUS_3                            61                              34
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(13Q12.11) MUTATED       95     91     80     43
  DEL PEAK 31(13Q12.11) WILD-TYPE     50     39     45     21
D61V9, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            95                              50
  CLUS_2                            91                              39
  CLUS_3                            80                              45
  CLUS_4                            43                              21
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       52    111    146
  DEL PEAK 31(13Q12.11) WILD-TYPE     19     52     84
D61V10, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            52                              19
  CLUS_2                           111                              52
  CLUS_3                           146                              84
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       94     71     55
  DEL PEAK 31(13Q12.11) WILD-TYPE     31     41     36
D61V11, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            94                              31
  CLUS_2                            71                              41
  CLUS_3                            55                              36
D61V12, binary
                                 cls
clus                                0   1
  DEL PEAK 31(13Q12.11) MUTATED   112 108
  DEL PEAK 31(13Q12.11) WILD-TYPE  66  42
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 31(13Q12.11) MUTATED    112  108
  DEL PEAK 31(13Q12.11) WILD-TYPE   66   42
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                           112                              66
  CLUS_2                           108                              42

Clustering(62) Variable = DEL PEAK 32(13Q14.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       28     31     27     19
  DEL PEAK 32(13Q14.2) WILD-TYPE     14     21      5      9
D62V1, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           28                             14
  CLUS_2                           31                             21
  CLUS_3                           27                              5
  CLUS_4                           19                              9
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       16     33     17     39
  DEL PEAK 32(13Q14.2) WILD-TYPE      6     23      6     14
D62V2, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           16                              6
  CLUS_2                           33                             23
  CLUS_3                           17                              6
  CLUS_4                           39                             14
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED      119    109    109
  DEL PEAK 32(13Q14.2) WILD-TYPE     74     53     26
D62V3, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                          119                             74
  CLUS_2                          109                             53
  CLUS_3                          109                             26
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       84     83     74
  DEL PEAK 32(13Q14.2) WILD-TYPE     58     31     26
D62V4, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           84                             58
  CLUS_2                           83                             31
  CLUS_3                           74                             26
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       43     49     45
  DEL PEAK 32(13Q14.2) WILD-TYPE     17     24     16
D62V5, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           43                             17
  CLUS_2                           49                             24
  CLUS_3                           45                             16
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       40     36     35     26
  DEL PEAK 32(13Q14.2) WILD-TYPE     18     11     14     14
D62V6, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           40                             18
  CLUS_2                           36                             11
  CLUS_3                           35                             14
  CLUS_4                           26                             14
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       70     99    108     57
  DEL PEAK 32(13Q14.2) WILD-TYPE     40     46     45     21
D62V7, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           70                             40
  CLUS_2                           99                             46
  CLUS_3                          108                             45
  CLUS_4                           57                             21
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED      140    122     72
  DEL PEAK 32(13Q14.2) WILD-TYPE     75     54     23
D62V8, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                          140                             75
  CLUS_2                          122                             54
  CLUS_3                           72                             23
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       96     98     79     45
  DEL PEAK 32(13Q14.2) WILD-TYPE     49     32     46     19
D62V9, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           96                             49
  CLUS_2                           98                             32
  CLUS_3                           79                             46
  CLUS_4                           45                             19
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       51    118    149
  DEL PEAK 32(13Q14.2) WILD-TYPE     20     45     81
D62V10, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           51                             20
  CLUS_2                          118                             45
  CLUS_3                          149                             81
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       99     72     55
  DEL PEAK 32(13Q14.2) WILD-TYPE     26     40     36
D62V11, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           99                             26
  CLUS_2                           72                             40
  CLUS_3                           55                             36
D62V12, binary
                                cls
clus                               0   1
  DEL PEAK 32(13Q14.2) MUTATED   112 114
  DEL PEAK 32(13Q14.2) WILD-TYPE  66  36
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 32(13Q14.2) MUTATED    112  114
  DEL PEAK 32(13Q14.2) WILD-TYPE   66   36
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                          112                             66
  CLUS_2                          114                             36

Clustering(63) Variable = DEL PEAK 33(14Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(14Q11.2) MUTATED        7     21     14     10
  DEL PEAK 33(14Q11.2) WILD-TYPE     35     31     18     18
D63V1, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                            7                             35
  CLUS_2                           21                             31
  CLUS_3                           14                             18
  CLUS_4                           10                             18
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(14Q11.2) MUTATED       10     22      4     16
  DEL PEAK 33(14Q11.2) WILD-TYPE     12     34     19     37
D63V2, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           10                             12
  CLUS_2                           22                             34
  CLUS_3                            4                             19
  CLUS_4                           16                             37
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(14Q11.2) MUTATED       62     60     49
  DEL PEAK 33(14Q11.2) WILD-TYPE    131    102     86
D63V3, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           62                            131
  CLUS_2                           60                            102
  CLUS_3                           49                             86
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(14Q11.2) MUTATED       50     41     35
  DEL PEAK 33(14Q11.2) WILD-TYPE     92     73     65
D63V4, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           50                             92
  CLUS_2                           41                             73
  CLUS_3                           35                             65
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(14Q11.2) MUTATED       27     23     25
  DEL PEAK 33(14Q11.2) WILD-TYPE     33     50     36
D63V5, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           27                             33
  CLUS_2                           23                             50
  CLUS_3                           25                             36
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(14Q11.2) MUTATED       27     17     14     17
  DEL PEAK 33(14Q11.2) WILD-TYPE     31     30     35     23
D63V6, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           27                             31
  CLUS_2                           17                             30
  CLUS_3                           14                             35
  CLUS_4                           17                             23
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(14Q11.2) MUTATED       23     54     73     19
  DEL PEAK 33(14Q11.2) WILD-TYPE     87     91     80     59
D63V7, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           23                             87
  CLUS_2                           54                             91
  CLUS_3                           73                             80
  CLUS_4                           19                             59
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(14Q11.2) MUTATED       53     62     54
  DEL PEAK 33(14Q11.2) WILD-TYPE    162    114     41
D63V8, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           53                            162
  CLUS_2                           62                            114
  CLUS_3                           54                             41
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(14Q11.2) MUTATED       52     41     35     34
  DEL PEAK 33(14Q11.2) WILD-TYPE     93     89     90     30
D63V9, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           52                             93
  CLUS_2                           41                             89
  CLUS_3                           35                             90
  CLUS_4                           34                             30
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(14Q11.2) MUTATED       33     57     72
  DEL PEAK 33(14Q11.2) WILD-TYPE     38    106    158
D63V10, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           33                             38
  CLUS_2                           57                            106
  CLUS_3                           72                            158
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(14Q11.2) MUTATED       44     36     37
  DEL PEAK 33(14Q11.2) WILD-TYPE     81     76     54
D63V11, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           44                             81
  CLUS_2                           36                             76
  CLUS_3                           37                             54
D63V12, binary
                                cls
clus                               0   1
  DEL PEAK 33(14Q11.2) MUTATED    59  58
  DEL PEAK 33(14Q11.2) WILD-TYPE 119  92
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 33(14Q11.2) MUTATED     59   58
  DEL PEAK 33(14Q11.2) WILD-TYPE  119   92
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           59                            119
  CLUS_2                           58                             92

Clustering(64) Variable = DEL PEAK 34(15Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(15Q12) MUTATED       15     21     13     14
  DEL PEAK 34(15Q12) WILD-TYPE     27     31     19     14
D64V1, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         15                           27
  CLUS_2                         21                           31
  CLUS_3                         13                           19
  CLUS_4                         14                           14
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(15Q12) MUTATED       11     24      8     20
  DEL PEAK 34(15Q12) WILD-TYPE     11     32     15     33
D64V2, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         11                           11
  CLUS_2                         24                           32
  CLUS_3                          8                           15
  CLUS_4                         20                           33
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(15Q12) MUTATED       56     64     49
  DEL PEAK 34(15Q12) WILD-TYPE    137     98     86
D64V3, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         56                          137
  CLUS_2                         64                           98
  CLUS_3                         49                           86
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(15Q12) MUTATED       44     32     40
  DEL PEAK 34(15Q12) WILD-TYPE     98     82     60
D64V4, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         44                           98
  CLUS_2                         32                           82
  CLUS_3                         40                           60
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(15Q12) MUTATED       29     25     16
  DEL PEAK 34(15Q12) WILD-TYPE     31     48     45
D64V5, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         29                           31
  CLUS_2                         25                           48
  CLUS_3                         16                           45
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(15Q12) MUTATED       26     19     19      6
  DEL PEAK 34(15Q12) WILD-TYPE     32     28     30     34
D64V6, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         26                           32
  CLUS_2                         19                           28
  CLUS_3                         19                           30
  CLUS_4                          6                           34
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(15Q12) MUTATED       35     45     64     24
  DEL PEAK 34(15Q12) WILD-TYPE     75    100     89     54
D64V7, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         35                           75
  CLUS_2                         45                          100
  CLUS_3                         64                           89
  CLUS_4                         24                           54
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(15Q12) MUTATED       69     52     47
  DEL PEAK 34(15Q12) WILD-TYPE    146    124     48
D64V8, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         69                          146
  CLUS_2                         52                          124
  CLUS_3                         47                           48
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(15Q12) MUTATED       61     51     31     18
  DEL PEAK 34(15Q12) WILD-TYPE     84     79     94     46
D64V9, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         61                           84
  CLUS_2                         51                           79
  CLUS_3                         31                           94
  CLUS_4                         18                           46
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(15Q12) MUTATED       24     55     82
  DEL PEAK 34(15Q12) WILD-TYPE     47    108    148
D64V10, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         24                           47
  CLUS_2                         55                          108
  CLUS_3                         82                          148
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(15Q12) MUTATED       44     37     23
  DEL PEAK 34(15Q12) WILD-TYPE     81     75     68
D64V11, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         44                           81
  CLUS_2                         37                           75
  CLUS_3                         23                           68
D64V12, binary
                              cls
clus                             0   1
  DEL PEAK 34(15Q12) MUTATED    54  50
  DEL PEAK 34(15Q12) WILD-TYPE 124 100
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 34(15Q12) MUTATED     54   50
  DEL PEAK 34(15Q12) WILD-TYPE  124  100
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         54                          124
  CLUS_2                         50                          100

Clustering(65) Variable = DEL PEAK 35(15Q21.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(15Q21.1) MUTATED       14     17     12     14
  DEL PEAK 35(15Q21.1) WILD-TYPE     28     35     20     14
D65V1, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           14                             28
  CLUS_2                           17                             35
  CLUS_3                           12                             20
  CLUS_4                           14                             14
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(15Q21.1) MUTATED       11     20      9     17
  DEL PEAK 35(15Q21.1) WILD-TYPE     11     36     14     36
D65V2, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           11                             11
  CLUS_2                           20                             36
  CLUS_3                            9                             14
  CLUS_4                           17                             36
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q21.1) MUTATED       50     60     52
  DEL PEAK 35(15Q21.1) WILD-TYPE    143    102     83
D65V3, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           50                            143
  CLUS_2                           60                            102
  CLUS_3                           52                             83
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q21.1) MUTATED       40     36     39
  DEL PEAK 35(15Q21.1) WILD-TYPE    102     78     61
D65V4, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           40                            102
  CLUS_2                           36                             78
  CLUS_3                           39                             61
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q21.1) MUTATED       26     24     15
  DEL PEAK 35(15Q21.1) WILD-TYPE     34     49     46
D65V5, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           26                             34
  CLUS_2                           24                             49
  CLUS_3                           15                             46
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(15Q21.1) MUTATED       25     17     18      5
  DEL PEAK 35(15Q21.1) WILD-TYPE     33     30     31     35
D65V6, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           25                             33
  CLUS_2                           17                             30
  CLUS_3                           18                             31
  CLUS_4                            5                             35
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(15Q21.1) MUTATED       34     44     61     22
  DEL PEAK 35(15Q21.1) WILD-TYPE     76    101     92     56
D65V7, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           34                             76
  CLUS_2                           44                            101
  CLUS_3                           61                             92
  CLUS_4                           22                             56
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q21.1) MUTATED       63     51     47
  DEL PEAK 35(15Q21.1) WILD-TYPE    152    125     48
D65V8, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           63                            152
  CLUS_2                           51                            125
  CLUS_3                           47                             48
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(15Q21.1) MUTATED       54     54     27     18
  DEL PEAK 35(15Q21.1) WILD-TYPE     91     76     98     46
D65V9, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           54                             91
  CLUS_2                           54                             76
  CLUS_3                           27                             98
  CLUS_4                           18                             46
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q21.1) MUTATED       21     58     74
  DEL PEAK 35(15Q21.1) WILD-TYPE     50    105    156
D65V10, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           21                             50
  CLUS_2                           58                            105
  CLUS_3                           74                            156
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q21.1) MUTATED       45     37     21
  DEL PEAK 35(15Q21.1) WILD-TYPE     80     75     70
D65V11, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           45                             80
  CLUS_2                           37                             75
  CLUS_3                           21                             70
D65V12, binary
                                cls
clus                               0   1
  DEL PEAK 35(15Q21.1) MUTATED    52  51
  DEL PEAK 35(15Q21.1) WILD-TYPE 126  99
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 35(15Q21.1) MUTATED     52   51
  DEL PEAK 35(15Q21.1) WILD-TYPE  126   99
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           52                            126
  CLUS_2                           51                             99

Clustering(66) Variable = DEL PEAK 36(16P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(16P13.3) MUTATED       17     22      7     10
  DEL PEAK 36(16P13.3) WILD-TYPE     25     30     25     18
D66V1, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           17                             25
  CLUS_2                           22                             30
  CLUS_3                            7                             25
  CLUS_4                           10                             18
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(16P13.3) MUTATED        5     22     11     18
  DEL PEAK 36(16P13.3) WILD-TYPE     17     34     12     35
D66V2, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                            5                             17
  CLUS_2                           22                             34
  CLUS_3                           11                             12
  CLUS_4                           18                             35
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       53     66     62
  DEL PEAK 36(16P13.3) WILD-TYPE    140     96     73
D66V3, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           53                            140
  CLUS_2                           66                             96
  CLUS_3                           62                             73
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       43     48     44
  DEL PEAK 36(16P13.3) WILD-TYPE     99     66     56
D66V4, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           43                             99
  CLUS_2                           48                             66
  CLUS_3                           44                             56
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       26     26     17
  DEL PEAK 36(16P13.3) WILD-TYPE     34     47     44
D66V5, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           26                             34
  CLUS_2                           26                             47
  CLUS_3                           17                             44
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(16P13.3) MUTATED       24     13     19     13
  DEL PEAK 36(16P13.3) WILD-TYPE     34     34     30     27
D66V6, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           24                             34
  CLUS_2                           13                             34
  CLUS_3                           19                             30
  CLUS_4                           13                             27
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(16P13.3) MUTATED       38     58     59     25
  DEL PEAK 36(16P13.3) WILD-TYPE     72     87     94     53
D66V7, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           38                             72
  CLUS_2                           58                             87
  CLUS_3                           59                             94
  CLUS_4                           25                             53
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       70     67     43
  DEL PEAK 36(16P13.3) WILD-TYPE    145    109     52
D66V8, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           70                            145
  CLUS_2                           67                            109
  CLUS_3                           43                             52
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(16P13.3) MUTATED       45     59     38     29
  DEL PEAK 36(16P13.3) WILD-TYPE    100     71     87     35
D66V9, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           45                            100
  CLUS_2                           59                             71
  CLUS_3                           38                             87
  CLUS_4                           29                             35
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       26     62     83
  DEL PEAK 36(16P13.3) WILD-TYPE     45    101    147
D66V10, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           26                             45
  CLUS_2                           62                            101
  CLUS_3                           83                            147
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       55     35     31
  DEL PEAK 36(16P13.3) WILD-TYPE     70     77     60
D66V11, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           55                             70
  CLUS_2                           35                             77
  CLUS_3                           31                             60
D66V12, binary
                                cls
clus                               0   1
  DEL PEAK 36(16P13.3) MUTATED    60  61
  DEL PEAK 36(16P13.3) WILD-TYPE 118  89
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 36(16P13.3) MUTATED     60   61
  DEL PEAK 36(16P13.3) WILD-TYPE  118   89
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           60                            118
  CLUS_2                           61                             89

Clustering(67) Variable = DEL PEAK 37(16Q23.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(16Q23.1) MUTATED       16     23     12     11
  DEL PEAK 37(16Q23.1) WILD-TYPE     26     29     20     17
D67V1, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           16                             26
  CLUS_2                           23                             29
  CLUS_3                           12                             20
  CLUS_4                           11                             17
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(16Q23.1) MUTATED        7     26      6     23
  DEL PEAK 37(16Q23.1) WILD-TYPE     15     30     17     30
D67V2, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                            7                             15
  CLUS_2                           26                             30
  CLUS_3                            6                             17
  CLUS_4                           23                             30
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       63     77     64
  DEL PEAK 37(16Q23.1) WILD-TYPE    130     85     71
D67V3, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           63                            130
  CLUS_2                           77                             85
  CLUS_3                           64                             71
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       52     47     48
  DEL PEAK 37(16Q23.1) WILD-TYPE     90     67     52
D67V4, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           52                             90
  CLUS_2                           47                             67
  CLUS_3                           48                             52
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       29     27     23
  DEL PEAK 37(16Q23.1) WILD-TYPE     31     46     38
D67V5, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           29                             31
  CLUS_2                           27                             46
  CLUS_3                           23                             38
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(16Q23.1) MUTATED       26     20     17     16
  DEL PEAK 37(16Q23.1) WILD-TYPE     32     27     32     24
D67V6, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           26                             32
  CLUS_2                           20                             27
  CLUS_3                           17                             32
  CLUS_4                           16                             24
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(16Q23.1) MUTATED       39     67     71     25
  DEL PEAK 37(16Q23.1) WILD-TYPE     71     78     82     53
D67V7, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           39                             71
  CLUS_2                           67                             78
  CLUS_3                           71                             82
  CLUS_4                           25                             53
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       78     79     45
  DEL PEAK 37(16Q23.1) WILD-TYPE    137     97     50
D67V8, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           78                            137
  CLUS_2                           79                             97
  CLUS_3                           45                             50
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(16Q23.1) MUTATED       60     62     40     33
  DEL PEAK 37(16Q23.1) WILD-TYPE     85     68     85     31
D67V9, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           60                             85
  CLUS_2                           62                             68
  CLUS_3                           40                             85
  CLUS_4                           33                             31
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       32     75     88
  DEL PEAK 37(16Q23.1) WILD-TYPE     39     88    142
D67V10, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           32                             39
  CLUS_2                           75                             88
  CLUS_3                           88                            142
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       67     32     39
  DEL PEAK 37(16Q23.1) WILD-TYPE     58     80     52
D67V11, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           67                             58
  CLUS_2                           32                             80
  CLUS_3                           39                             52
D67V12, binary
                                cls
clus                               0   1
  DEL PEAK 37(16Q23.1) MUTATED    61  77
  DEL PEAK 37(16Q23.1) WILD-TYPE 117  73
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 37(16Q23.1) MUTATED     61   77
  DEL PEAK 37(16Q23.1) WILD-TYPE  117   73
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           61                            117
  CLUS_2                           77                             73

Clustering(68) Variable = DEL PEAK 38(17Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(17Q11.2) MUTATED       21      5     11      6
  DEL PEAK 38(17Q11.2) WILD-TYPE     21     47     21     22
D68V1, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           21                             21
  CLUS_2                            5                             47
  CLUS_3                           11                             21
  CLUS_4                            6                             22
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(17Q11.2) MUTATED        8      5      9     21
  DEL PEAK 38(17Q11.2) WILD-TYPE     14     51     14     32
D68V2, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                            8                             14
  CLUS_2                            5                             51
  CLUS_3                            9                             14
  CLUS_4                           21                             32
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17Q11.2) MUTATED       58     20     50
  DEL PEAK 38(17Q11.2) WILD-TYPE    135    142     85
D68V3, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           58                            135
  CLUS_2                           20                            142
  CLUS_3                           50                             85
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17Q11.2) MUTATED       47     11     30
  DEL PEAK 38(17Q11.2) WILD-TYPE     95    103     70
D68V4, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           47                             95
  CLUS_2                           11                            103
  CLUS_3                           30                             70
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17Q11.2) MUTATED       11     21     15
  DEL PEAK 38(17Q11.2) WILD-TYPE     49     52     46
D68V5, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           11                             49
  CLUS_2                           21                             52
  CLUS_3                           15                             46
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(17Q11.2) MUTATED       14      7     15     11
  DEL PEAK 38(17Q11.2) WILD-TYPE     44     40     34     29
D68V6, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           14                             44
  CLUS_2                            7                             40
  CLUS_3                           15                             34
  CLUS_4                           11                             29
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(17Q11.2) MUTATED       41     12     49     25
  DEL PEAK 38(17Q11.2) WILD-TYPE     69    133    104     53
D68V7, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           41                             69
  CLUS_2                           12                            133
  CLUS_3                           49                            104
  CLUS_4                           25                             53
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17Q11.2) MUTATED       84     16     27
  DEL PEAK 38(17Q11.2) WILD-TYPE    131    160     68
D68V8, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           84                            131
  CLUS_2                           16                            160
  CLUS_3                           27                             68
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(17Q11.2) MUTATED       40     33     40     11
  DEL PEAK 38(17Q11.2) WILD-TYPE    105     97     85     53
D68V9, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           40                            105
  CLUS_2                           33                             97
  CLUS_3                           40                             85
  CLUS_4                           11                             53
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17Q11.2) MUTATED        8     51     65
  DEL PEAK 38(17Q11.2) WILD-TYPE     63    112    165
D68V10, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                            8                             63
  CLUS_2                           51                            112
  CLUS_3                           65                            165
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17Q11.2) MUTATED       22     38     24
  DEL PEAK 38(17Q11.2) WILD-TYPE    103     74     67
D68V11, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           22                            103
  CLUS_2                           38                             74
  CLUS_3                           24                             67
D68V12, binary
                                cls
clus                               0   1
  DEL PEAK 38(17Q11.2) MUTATED    59  25
  DEL PEAK 38(17Q11.2) WILD-TYPE 119 125
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 38(17Q11.2) MUTATED     59   25
  DEL PEAK 38(17Q11.2) WILD-TYPE  119  125
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           59                            119
  CLUS_2                           25                            125

Clustering(69) Variable = DEL PEAK 39(17Q25.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(17Q25.3) MUTATED       16      5      7      3
  DEL PEAK 39(17Q25.3) WILD-TYPE     26     47     25     25
D69V1, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           16                             26
  CLUS_2                            5                             47
  CLUS_3                            7                             25
  CLUS_4                            3                             25
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(17Q25.3) MUTATED        3      5      6     17
  DEL PEAK 39(17Q25.3) WILD-TYPE     19     51     17     36
D69V2, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                            3                             19
  CLUS_2                            5                             51
  CLUS_3                            6                             17
  CLUS_4                           17                             36
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED       45     19     36
  DEL PEAK 39(17Q25.3) WILD-TYPE    148    143     99
D69V3, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           45                            148
  CLUS_2                           19                            143
  CLUS_3                           36                             99
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED       33     14     25
  DEL PEAK 39(17Q25.3) WILD-TYPE    109    100     75
D69V4, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           33                            109
  CLUS_2                           14                            100
  CLUS_3                           25                             75
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED       12     17     10
  DEL PEAK 39(17Q25.3) WILD-TYPE     48     56     51
D69V5, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           12                             48
  CLUS_2                           17                             56
  CLUS_3                           10                             51
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(17Q25.3) MUTATED       11     10     10      8
  DEL PEAK 39(17Q25.3) WILD-TYPE     47     37     39     32
D69V6, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           11                             47
  CLUS_2                           10                             37
  CLUS_3                           10                             39
  CLUS_4                            8                             32
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(17Q25.3) MUTATED       33     18     35     14
  DEL PEAK 39(17Q25.3) WILD-TYPE     77    127    118     64
D69V7, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           33                             77
  CLUS_2                           18                            127
  CLUS_3                           35                            118
  CLUS_4                           14                             64
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED       61     21     18
  DEL PEAK 39(17Q25.3) WILD-TYPE    154    155     77
D69V8, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           61                            154
  CLUS_2                           21                            155
  CLUS_3                           18                             77
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(17Q25.3) MUTATED       29     27     29     12
  DEL PEAK 39(17Q25.3) WILD-TYPE    116    103     96     52
D69V9, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           29                            116
  CLUS_2                           27                            103
  CLUS_3                           29                             96
  CLUS_4                           12                             52
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED        7     36     54
  DEL PEAK 39(17Q25.3) WILD-TYPE     64    127    176
D69V10, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                            7                             64
  CLUS_2                           36                            127
  CLUS_3                           54                            176
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED       24     28     16
  DEL PEAK 39(17Q25.3) WILD-TYPE    101     84     75
D69V11, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           24                            101
  CLUS_2                           28                             84
  CLUS_3                           16                             75
D69V12, binary
                                cls
clus                               0   1
  DEL PEAK 39(17Q25.3) MUTATED    46  22
  DEL PEAK 39(17Q25.3) WILD-TYPE 132 128
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 39(17Q25.3) MUTATED     46   22
  DEL PEAK 39(17Q25.3) WILD-TYPE  132  128
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           46                            132
  CLUS_2                           22                            128

Clustering(70) Variable = DEL PEAK 40(18Q23) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(18Q23) MUTATED       23     23     14     11
  DEL PEAK 40(18Q23) WILD-TYPE     19     29     18     17
D70V1, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         23                           19
  CLUS_2                         23                           29
  CLUS_3                         14                           18
  CLUS_4                         11                           17
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(18Q23) MUTATED        7     24     13     27
  DEL PEAK 40(18Q23) WILD-TYPE     15     32     10     26
D70V2, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                          7                           15
  CLUS_2                         24                           32
  CLUS_3                         13                           10
  CLUS_4                         27                           26
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18Q23) MUTATED       74     82     71
  DEL PEAK 40(18Q23) WILD-TYPE    119     80     64
D70V3, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         74                          119
  CLUS_2                         82                           80
  CLUS_3                         71                           64
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18Q23) MUTATED       63     62     44
  DEL PEAK 40(18Q23) WILD-TYPE     79     52     56
D70V4, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         63                           79
  CLUS_2                         62                           52
  CLUS_3                         44                           56
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18Q23) MUTATED       26     34     29
  DEL PEAK 40(18Q23) WILD-TYPE     34     39     32
D70V5, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         26                           34
  CLUS_2                         34                           39
  CLUS_3                         29                           32
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(18Q23) MUTATED       23     25     26     15
  DEL PEAK 40(18Q23) WILD-TYPE     35     22     23     25
D70V6, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         23                           35
  CLUS_2                         25                           22
  CLUS_3                         26                           23
  CLUS_4                         15                           25
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(18Q23) MUTATED       52     70     69     34
  DEL PEAK 40(18Q23) WILD-TYPE     58     75     84     44
D70V7, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         52                           58
  CLUS_2                         70                           75
  CLUS_3                         69                           84
  CLUS_4                         34                           44
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18Q23) MUTATED      105     83     37
  DEL PEAK 40(18Q23) WILD-TYPE    110     93     58
D70V8, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                        105                          110
  CLUS_2                         83                           93
  CLUS_3                         37                           58
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(18Q23) MUTATED       68     70     52     26
  DEL PEAK 40(18Q23) WILD-TYPE     77     60     73     38
D70V9, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         68                           77
  CLUS_2                         70                           60
  CLUS_3                         52                           73
  CLUS_4                         26                           38
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18Q23) MUTATED       34     80    102
  DEL PEAK 40(18Q23) WILD-TYPE     37     83    128
D70V10, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         34                           37
  CLUS_2                         80                           83
  CLUS_3                        102                          128
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18Q23) MUTATED       62     58     33
  DEL PEAK 40(18Q23) WILD-TYPE     63     54     58
D70V11, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         62                           63
  CLUS_2                         58                           54
  CLUS_3                         33                           58
D70V12, binary
                              cls
clus                             0   1
  DEL PEAK 40(18Q23) MUTATED    78  75
  DEL PEAK 40(18Q23) WILD-TYPE 100  75
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 40(18Q23) MUTATED     78   75
  DEL PEAK 40(18Q23) WILD-TYPE  100   75
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         78                          100
  CLUS_2                         75                           75

Clustering(71) Variable = DEL PEAK 41(19P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(19P13.3) MUTATED       20     24     17     18
  DEL PEAK 41(19P13.3) WILD-TYPE     22     28     15     10
D71V1, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           20                             22
  CLUS_2                           24                             28
  CLUS_3                           17                             15
  CLUS_4                           18                             10
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(19P13.3) MUTATED       17     25      7     30
  DEL PEAK 41(19P13.3) WILD-TYPE      5     31     16     23
D71V2, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           17                              5
  CLUS_2                           25                             31
  CLUS_3                            7                             16
  CLUS_4                           30                             23
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(19P13.3) MUTATED       71     76     82
  DEL PEAK 41(19P13.3) WILD-TYPE    122     86     53
D71V3, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           71                            122
  CLUS_2                           76                             86
  CLUS_3                           82                             53
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(19P13.3) MUTATED       61     53     47
  DEL PEAK 41(19P13.3) WILD-TYPE     81     61     53
D71V4, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           61                             81
  CLUS_2                           53                             61
  CLUS_3                           47                             53
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(19P13.3) MUTATED       31     41     23
  DEL PEAK 41(19P13.3) WILD-TYPE     29     32     38
D71V5, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           31                             29
  CLUS_2                           41                             32
  CLUS_3                           23                             38
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(19P13.3) MUTATED       26     22     31     16
  DEL PEAK 41(19P13.3) WILD-TYPE     32     25     18     24
D71V6, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           26                             32
  CLUS_2                           22                             25
  CLUS_3                           31                             18
  CLUS_4                           16                             24
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(19P13.3) MUTATED       54     57     80     37
  DEL PEAK 41(19P13.3) WILD-TYPE     56     88     73     41
D71V7, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           54                             56
  CLUS_2                           57                             88
  CLUS_3                           80                             73
  CLUS_4                           37                             41
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(19P13.3) MUTATED      109     66     53
  DEL PEAK 41(19P13.3) WILD-TYPE    106    110     42
D71V8, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                          109                            106
  CLUS_2                           66                            110
  CLUS_3                           53                             42
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(19P13.3) MUTATED       74     69     51     23
  DEL PEAK 41(19P13.3) WILD-TYPE     71     61     74     41
D71V9, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           74                             71
  CLUS_2                           69                             61
  CLUS_3                           51                             74
  CLUS_4                           23                             41
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(19P13.3) MUTATED       22     90    105
  DEL PEAK 41(19P13.3) WILD-TYPE     49     73    125
D71V10, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           22                             49
  CLUS_2                           90                             73
  CLUS_3                          105                            125
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(19P13.3) MUTATED       60     53     35
  DEL PEAK 41(19P13.3) WILD-TYPE     65     59     56
D71V11, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           60                             65
  CLUS_2                           53                             59
  CLUS_3                           35                             56
D71V12, binary
                                cls
clus                              0  1
  DEL PEAK 41(19P13.3) MUTATED   79 69
  DEL PEAK 41(19P13.3) WILD-TYPE 99 81
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 41(19P13.3) MUTATED     79   69
  DEL PEAK 41(19P13.3) WILD-TYPE   99   81
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           79                             99
  CLUS_2                           69                             81

Clustering(72) Variable = DEL PEAK 42(19Q13.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(19Q13.32) MUTATED       11     18      9      9
  DEL PEAK 42(19Q13.32) WILD-TYPE     31     34     23     19
D72V1, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            11                              31
  CLUS_2                            18                              34
  CLUS_3                             9                              23
  CLUS_4                             9                              19
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(19Q13.32) MUTATED        9     20      7     11
  DEL PEAK 42(19Q13.32) WILD-TYPE     13     36     16     42
D72V2, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                             9                              13
  CLUS_2                            20                              36
  CLUS_3                             7                              16
  CLUS_4                            11                              42
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(19Q13.32) MUTATED       32     72     39
  DEL PEAK 42(19Q13.32) WILD-TYPE    161     90     96
D72V3, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            32                             161
  CLUS_2                            72                              90
  CLUS_3                            39                              96
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(19Q13.32) MUTATED       21     43     37
  DEL PEAK 42(19Q13.32) WILD-TYPE    121     71     63
D72V4, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            21                             121
  CLUS_2                            43                              71
  CLUS_3                            37                              63
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(19Q13.32) MUTATED       21     15     18
  DEL PEAK 42(19Q13.32) WILD-TYPE     39     58     43
D72V5, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            21                              39
  CLUS_2                            15                              58
  CLUS_3                            18                              43
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(19Q13.32) MUTATED       14     16     13     11
  DEL PEAK 42(19Q13.32) WILD-TYPE     44     31     36     29
D72V6, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            14                              44
  CLUS_2                            16                              31
  CLUS_3                            13                              36
  CLUS_4                            11                              29
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(19Q13.32) MUTATED       28     59     36     20
  DEL PEAK 42(19Q13.32) WILD-TYPE     82     86    117     58
D72V7, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            28                              82
  CLUS_2                            59                              86
  CLUS_3                            36                             117
  CLUS_4                            20                              58
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(19Q13.32) MUTATED       49     69     25
  DEL PEAK 42(19Q13.32) WILD-TYPE    166    107     70
D72V8, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            49                             166
  CLUS_2                            69                             107
  CLUS_3                            25                              70
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(19Q13.32) MUTATED       41     46     23     25
  DEL PEAK 42(19Q13.32) WILD-TYPE    104     84    102     39
D72V9, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            41                             104
  CLUS_2                            46                              84
  CLUS_3                            23                             102
  CLUS_4                            25                              39
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(19Q13.32) MUTATED       19     50     66
  DEL PEAK 42(19Q13.32) WILD-TYPE     52    113    164
D72V10, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            19                              52
  CLUS_2                            50                             113
  CLUS_3                            66                             164
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(19Q13.32) MUTATED       42     26     26
  DEL PEAK 42(19Q13.32) WILD-TYPE     83     86     65
D72V11, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            42                              83
  CLUS_2                            26                              86
  CLUS_3                            26                              65
D72V12, binary
                                 cls
clus                                0   1
  DEL PEAK 42(19Q13.32) MUTATED    41  53
  DEL PEAK 42(19Q13.32) WILD-TYPE 137  97
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 42(19Q13.32) MUTATED     41   53
  DEL PEAK 42(19Q13.32) WILD-TYPE  137   97
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            41                             137
  CLUS_2                            53                              97

Clustering(73) Variable = DEL PEAK 43(21Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(21Q11.2) MUTATED       21     27     15     10
  DEL PEAK 43(21Q11.2) WILD-TYPE     21     25     17     18
D73V1, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           21                             21
  CLUS_2                           27                             25
  CLUS_3                           15                             17
  CLUS_4                           10                             18
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(21Q11.2) MUTATED        7     28     12     26
  DEL PEAK 43(21Q11.2) WILD-TYPE     15     28     11     27
D73V2, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                            7                             15
  CLUS_2                           28                             28
  CLUS_3                           12                             11
  CLUS_4                           26                             27
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(21Q11.2) MUTATED       71     91     79
  DEL PEAK 43(21Q11.2) WILD-TYPE    122     71     56
D73V3, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           71                            122
  CLUS_2                           91                             71
  CLUS_3                           79                             56
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(21Q11.2) MUTATED       62     59     56
  DEL PEAK 43(21Q11.2) WILD-TYPE     80     55     44
D73V4, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           62                             80
  CLUS_2                           59                             55
  CLUS_3                           56                             44
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(21Q11.2) MUTATED       26     33     27
  DEL PEAK 43(21Q11.2) WILD-TYPE     34     40     34
D73V5, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           26                             34
  CLUS_2                           33                             40
  CLUS_3                           27                             34
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(21Q11.2) MUTATED       25     21     23     17
  DEL PEAK 43(21Q11.2) WILD-TYPE     33     26     26     23
D73V6, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           25                             33
  CLUS_2                           21                             26
  CLUS_3                           23                             26
  CLUS_4                           17                             23
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(21Q11.2) MUTATED       49     77     83     31
  DEL PEAK 43(21Q11.2) WILD-TYPE     61     68     70     47
D73V7, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           49                             61
  CLUS_2                           77                             68
  CLUS_3                           83                             70
  CLUS_4                           31                             47
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(21Q11.2) MUTATED       93     90     57
  DEL PEAK 43(21Q11.2) WILD-TYPE    122     86     38
D73V8, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           93                            122
  CLUS_2                           90                             86
  CLUS_3                           57                             38
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(21Q11.2) MUTATED       77     82     46     25
  DEL PEAK 43(21Q11.2) WILD-TYPE     68     48     79     39
D73V9, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           77                             68
  CLUS_2                           82                             48
  CLUS_3                           46                             79
  CLUS_4                           25                             39
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(21Q11.2) MUTATED       31     93    106
  DEL PEAK 43(21Q11.2) WILD-TYPE     40     70    124
D73V10, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           31                             40
  CLUS_2                           93                             70
  CLUS_3                          106                            124
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(21Q11.2) MUTATED       73     55     35
  DEL PEAK 43(21Q11.2) WILD-TYPE     52     57     56
D73V11, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           73                             52
  CLUS_2                           55                             57
  CLUS_3                           35                             56
D73V12, binary
                                cls
clus                              0  1
  DEL PEAK 43(21Q11.2) MUTATED   82 81
  DEL PEAK 43(21Q11.2) WILD-TYPE 96 69
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 43(21Q11.2) MUTATED     82   81
  DEL PEAK 43(21Q11.2) WILD-TYPE   96   69
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           82                             96
  CLUS_2                           81                             69

Clustering(74) Variable = DEL PEAK 44(21Q22.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(21Q22.3) MUTATED       25     35     19     16
  DEL PEAK 44(21Q22.3) WILD-TYPE     17     17     13     12
D74V1, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           25                             17
  CLUS_2                           35                             17
  CLUS_3                           19                             13
  CLUS_4                           16                             12
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(21Q22.3) MUTATED        9     39     14     33
  DEL PEAK 44(21Q22.3) WILD-TYPE     13     17      9     20
D74V2, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                            9                             13
  CLUS_2                           39                             17
  CLUS_3                           14                              9
  CLUS_4                           33                             20
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(21Q22.3) MUTATED       79    110     87
  DEL PEAK 44(21Q22.3) WILD-TYPE    114     52     48
D74V3, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           79                            114
  CLUS_2                          110                             52
  CLUS_3                           87                             48
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(21Q22.3) MUTATED       66     70     58
  DEL PEAK 44(21Q22.3) WILD-TYPE     76     44     42
D74V4, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           66                             76
  CLUS_2                           70                             44
  CLUS_3                           58                             42
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(21Q22.3) MUTATED       34     43     30
  DEL PEAK 44(21Q22.3) WILD-TYPE     26     30     31
D74V5, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           34                             26
  CLUS_2                           43                             30
  CLUS_3                           30                             31
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(21Q22.3) MUTATED       28     31     30     18
  DEL PEAK 44(21Q22.3) WILD-TYPE     30     16     19     22
D74V6, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           28                             30
  CLUS_2                           31                             16
  CLUS_3                           30                             19
  CLUS_4                           18                             22
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(21Q22.3) MUTATED       57     91     88     38
  DEL PEAK 44(21Q22.3) WILD-TYPE     53     54     65     40
D74V7, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           57                             53
  CLUS_2                           91                             54
  CLUS_3                           88                             65
  CLUS_4                           38                             40
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(21Q22.3) MUTATED      103    109     62
  DEL PEAK 44(21Q22.3) WILD-TYPE    112     67     33
D74V8, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                          103                            112
  CLUS_2                          109                             67
  CLUS_3                           62                             33
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(21Q22.3) MUTATED       95     84     52     33
  DEL PEAK 44(21Q22.3) WILD-TYPE     50     46     73     31
D74V9, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           95                             50
  CLUS_2                           84                             46
  CLUS_3                           52                             73
  CLUS_4                           33                             31
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(21Q22.3) MUTATED       43    102    119
  DEL PEAK 44(21Q22.3) WILD-TYPE     28     61    111
D74V10, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           43                             28
  CLUS_2                          102                             61
  CLUS_3                          119                            111
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(21Q22.3) MUTATED       74     59     43
  DEL PEAK 44(21Q22.3) WILD-TYPE     51     53     48
D74V11, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           74                             51
  CLUS_2                           59                             53
  CLUS_3                           43                             48
D74V12, binary
                                cls
clus                              0  1
  DEL PEAK 44(21Q22.3) MUTATED   86 90
  DEL PEAK 44(21Q22.3) WILD-TYPE 92 60
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 44(21Q22.3) MUTATED     86   90
  DEL PEAK 44(21Q22.3) WILD-TYPE   92   60
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           86                             92
  CLUS_2                           90                             60

Clustering(75) Variable = DEL PEAK 45(22Q11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(22Q11.21) MUTATED        4     11      8     11
  DEL PEAK 45(22Q11.21) WILD-TYPE     38     41     24     17
D75V1, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                             4                              38
  CLUS_2                            11                              41
  CLUS_3                             8                              24
  CLUS_4                            11                              17
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(22Q11.21) MUTATED        9     12      4      9
  DEL PEAK 45(22Q11.21) WILD-TYPE     13     44     19     44
D75V2, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                             9                              13
  CLUS_2                            12                              44
  CLUS_3                             4                              19
  CLUS_4                             9                              44
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(22Q11.21) MUTATED       42     25     25
  DEL PEAK 45(22Q11.21) WILD-TYPE    151    137    110
D75V3, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                            42                             151
  CLUS_2                            25                             137
  CLUS_3                            25                             110
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(22Q11.21) MUTATED       33     14     16
  DEL PEAK 45(22Q11.21) WILD-TYPE    109    100     84
D75V4, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                            33                             109
  CLUS_2                            14                             100
  CLUS_3                            16                              84
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(22Q11.21) MUTATED       14     13      6
  DEL PEAK 45(22Q11.21) WILD-TYPE     46     60     55
D75V5, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                            14                              46
  CLUS_2                            13                              60
  CLUS_3                             6                              55
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(22Q11.21) MUTATED       15      5      9      4
  DEL PEAK 45(22Q11.21) WILD-TYPE     43     42     40     36
D75V6, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                            15                              43
  CLUS_2                             5                              42
  CLUS_3                             9                              40
  CLUS_4                             4                              36
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(22Q11.21) MUTATED       20     20     37     15
  DEL PEAK 45(22Q11.21) WILD-TYPE     90    125    116     63
D75V7, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                            20                              90
  CLUS_2                            20                             125
  CLUS_3                            37                             116
  CLUS_4                            15                              63
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(22Q11.21) MUTATED       44     24     24
  DEL PEAK 45(22Q11.21) WILD-TYPE    171    152     71
D75V8, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                            44                             171
  CLUS_2                            24                             152
  CLUS_3                            24                              71
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(22Q11.21) MUTATED       32     22     22      8
  DEL PEAK 45(22Q11.21) WILD-TYPE    113    108    103     56
D75V9, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                            32                             113
  CLUS_2                            22                             108
  CLUS_3                            22                             103
  CLUS_4                             8                              56
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(22Q11.21) MUTATED       12     32     40
  DEL PEAK 45(22Q11.21) WILD-TYPE     59    131    190
D75V10, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                            12                              59
  CLUS_2                            32                             131
  CLUS_3                            40                             190
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(22Q11.21) MUTATED       21     17     19
  DEL PEAK 45(22Q11.21) WILD-TYPE    104     95     72
D75V11, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                            21                             104
  CLUS_2                            17                              95
  CLUS_3                            19                              72
D75V12, binary
                                 cls
clus                                0   1
  DEL PEAK 45(22Q11.21) MUTATED    30  27
  DEL PEAK 45(22Q11.21) WILD-TYPE 148 123
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 45(22Q11.21) MUTATED     30   27
  DEL PEAK 45(22Q11.21) WILD-TYPE  148  123
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                            30                             148
  CLUS_2                            27                             123

Clustering(76) Variable = DEL PEAK 46(22Q13.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(22Q13.32) MUTATED        8      8      8     17
  DEL PEAK 46(22Q13.32) WILD-TYPE     34     44     24     11
D76V1, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                             8                              34
  CLUS_2                             8                              44
  CLUS_3                             8                              24
  CLUS_4                            17                              11
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(22Q13.32) MUTATED       13      9      7     12
  DEL PEAK 46(22Q13.32) WILD-TYPE      9     47     16     41
D76V2, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                            13                               9
  CLUS_2                             9                              47
  CLUS_3                             7                              16
  CLUS_4                            12                              41
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(22Q13.32) MUTATED       55     32     38
  DEL PEAK 46(22Q13.32) WILD-TYPE    138    130     97
D76V3, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                            55                             138
  CLUS_2                            32                             130
  CLUS_3                            38                              97
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(22Q13.32) MUTATED       46     19     26
  DEL PEAK 46(22Q13.32) WILD-TYPE     96     95     74
D76V4, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                            46                              96
  CLUS_2                            19                              95
  CLUS_3                            26                              74
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(22Q13.32) MUTATED       17     18     11
  DEL PEAK 46(22Q13.32) WILD-TYPE     43     55     50
D76V5, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                            17                              43
  CLUS_2                            18                              55
  CLUS_3                            11                              50
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(22Q13.32) MUTATED       19      7     14      6
  DEL PEAK 46(22Q13.32) WILD-TYPE     39     40     35     34
D76V6, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                            19                              39
  CLUS_2                             7                              40
  CLUS_3                            14                              35
  CLUS_4                             6                              34
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(22Q13.32) MUTATED       29     22     57     17
  DEL PEAK 46(22Q13.32) WILD-TYPE     81    123     96     61
D76V7, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                            29                              81
  CLUS_2                            22                             123
  CLUS_3                            57                              96
  CLUS_4                            17                              61
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(22Q13.32) MUTATED       63     26     36
  DEL PEAK 46(22Q13.32) WILD-TYPE    152    150     59
D76V8, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                            63                             152
  CLUS_2                            26                             150
  CLUS_3                            36                              59
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(22Q13.32) MUTATED       41     37     29      8
  DEL PEAK 46(22Q13.32) WILD-TYPE    104     93     96     56
D76V9, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                            41                             104
  CLUS_2                            37                              93
  CLUS_3                            29                              96
  CLUS_4                             8                              56
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(22Q13.32) MUTATED        7     53     55
  DEL PEAK 46(22Q13.32) WILD-TYPE     64    110    175
D76V10, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                             7                              64
  CLUS_2                            53                             110
  CLUS_3                            55                             175
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(22Q13.32) MUTATED       33     27     23
  DEL PEAK 46(22Q13.32) WILD-TYPE     92     85     68
D76V11, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                            33                              92
  CLUS_2                            27                              85
  CLUS_3                            23                              68
D76V12, binary
                                 cls
clus                                0   1
  DEL PEAK 46(22Q13.32) MUTATED    43  40
  DEL PEAK 46(22Q13.32) WILD-TYPE 135 110
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 46(22Q13.32) MUTATED     43   40
  DEL PEAK 46(22Q13.32) WILD-TYPE  135  110
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                            43                             135
  CLUS_2                            40                             110

Clustering(77) Variable = DEL PEAK 47(XP22.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(XP22.2) MUTATED       10     18      9      8
  DEL PEAK 47(XP22.2) WILD-TYPE     32     34     23     20
D77V1, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          10                            32
  CLUS_2                          18                            34
  CLUS_3                           9                            23
  CLUS_4                           8                            20
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(XP22.2) MUTATED        5     19      6     15
  DEL PEAK 47(XP22.2) WILD-TYPE     17     37     17     38
D77V2, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                           5                            17
  CLUS_2                          19                            37
  CLUS_3                           6                            17
  CLUS_4                          15                            38
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XP22.2) MUTATED       38     64     49
  DEL PEAK 47(XP22.2) WILD-TYPE    155     98     86
D77V3, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          38                           155
  CLUS_2                          64                            98
  CLUS_3                          49                            86
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XP22.2) MUTATED       26     44     39
  DEL PEAK 47(XP22.2) WILD-TYPE    116     70     61
D77V4, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          26                           116
  CLUS_2                          44                            70
  CLUS_3                          39                            61
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XP22.2) MUTATED       22     25     16
  DEL PEAK 47(XP22.2) WILD-TYPE     38     48     45
D77V5, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          22                            38
  CLUS_2                          25                            48
  CLUS_3                          16                            45
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(XP22.2) MUTATED       18     18     14     13
  DEL PEAK 47(XP22.2) WILD-TYPE     40     29     35     27
D77V6, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          18                            40
  CLUS_2                          18                            29
  CLUS_3                          14                            35
  CLUS_4                          13                            27
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(XP22.2) MUTATED       35     56     43     15
  DEL PEAK 47(XP22.2) WILD-TYPE     75     89    110     63
D77V7, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          35                            75
  CLUS_2                          56                            89
  CLUS_3                          43                           110
  CLUS_4                          15                            63
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XP22.2) MUTATED       57     65     27
  DEL PEAK 47(XP22.2) WILD-TYPE    158    111     68
D77V8, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          57                           158
  CLUS_2                          65                           111
  CLUS_3                          27                            68
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(XP22.2) MUTATED       40     50     26     28
  DEL PEAK 47(XP22.2) WILD-TYPE    105     80     99     36
D77V9, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          40                           105
  CLUS_2                          50                            80
  CLUS_3                          26                            99
  CLUS_4                          28                            36
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XP22.2) MUTATED       27     58     59
  DEL PEAK 47(XP22.2) WILD-TYPE     44    105    171
D77V10, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          27                            44
  CLUS_2                          58                           105
  CLUS_3                          59                           171
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XP22.2) MUTATED       55     26     23
  DEL PEAK 47(XP22.2) WILD-TYPE     70     86     68
D77V11, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          55                            70
  CLUS_2                          26                            86
  CLUS_3                          23                            68
D77V12, binary
                               cls
clus                              0   1
  DEL PEAK 47(XP22.2) MUTATED    35  69
  DEL PEAK 47(XP22.2) WILD-TYPE 143  81
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 47(XP22.2) MUTATED     35   69
  DEL PEAK 47(XP22.2) WILD-TYPE  143   81
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          35                           143
  CLUS_2                          69                            81

Clustering(78) Variable = DEL PEAK 48(XP21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(XP21.1) MUTATED       11     20      8      7
  DEL PEAK 48(XP21.1) WILD-TYPE     31     32     24     21
D78V1, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          11                            31
  CLUS_2                          20                            32
  CLUS_3                           8                            24
  CLUS_4                           7                            21
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(XP21.1) MUTATED        5     20      7     14
  DEL PEAK 48(XP21.1) WILD-TYPE     17     36     16     39
D78V2, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                           5                            17
  CLUS_2                          20                            36
  CLUS_3                           7                            16
  CLUS_4                          14                            39
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(XP21.1) MUTATED       34     68     47
  DEL PEAK 48(XP21.1) WILD-TYPE    159     94     88
D78V3, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          34                           159
  CLUS_2                          68                            94
  CLUS_3                          47                            88
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(XP21.1) MUTATED       21     47     39
  DEL PEAK 48(XP21.1) WILD-TYPE    121     67     61
D78V4, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          21                           121
  CLUS_2                          47                            67
  CLUS_3                          39                            61
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(XP21.1) MUTATED       24     23     16
  DEL PEAK 48(XP21.1) WILD-TYPE     36     50     45
D78V5, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          24                            36
  CLUS_2                          23                            50
  CLUS_3                          16                            45
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(XP21.1) MUTATED       20     17     13     13
  DEL PEAK 48(XP21.1) WILD-TYPE     38     30     36     27
D78V6, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          20                            38
  CLUS_2                          17                            30
  CLUS_3                          13                            36
  CLUS_4                          13                            27
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(XP21.1) MUTATED       34     62     36     15
  DEL PEAK 48(XP21.1) WILD-TYPE     76     83    117     63
D78V7, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          34                            76
  CLUS_2                          62                            83
  CLUS_3                          36                           117
  CLUS_4                          15                            63
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(XP21.1) MUTATED       51     70     26
  DEL PEAK 48(XP21.1) WILD-TYPE    164    106     69
D78V8, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          51                           164
  CLUS_2                          70                           106
  CLUS_3                          26                            69
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(XP21.1) MUTATED       44     52     20     28
  DEL PEAK 48(XP21.1) WILD-TYPE    101     78    105     36
D78V9, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          44                           101
  CLUS_2                          52                            78
  CLUS_3                          20                           105
  CLUS_4                          28                            36
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(XP21.1) MUTATED       30     55     59
  DEL PEAK 48(XP21.1) WILD-TYPE     41    108    171
D78V10, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          30                            41
  CLUS_2                          55                           108
  CLUS_3                          59                           171
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(XP21.1) MUTATED       55     24     22
  DEL PEAK 48(XP21.1) WILD-TYPE     70     88     69
D78V11, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          55                            70
  CLUS_2                          24                            88
  CLUS_3                          22                            69
D78V12, binary
                               cls
clus                              0   1
  DEL PEAK 48(XP21.1) MUTATED    29  72
  DEL PEAK 48(XP21.1) WILD-TYPE 149  78
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 48(XP21.1) MUTATED     29   72
  DEL PEAK 48(XP21.1) WILD-TYPE  149   78
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          29                           149
  CLUS_2                          72                            78

Clustering(79) Variable = DEL PEAK 49(XP11.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(XP11.3) MUTATED        8     20      7     11
  DEL PEAK 49(XP11.3) WILD-TYPE     34     32     25     17
D79V1, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                           8                            34
  CLUS_2                          20                            32
  CLUS_3                           7                            25
  CLUS_4                          11                            17
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(XP11.3) MUTATED        5     20      7     14
  DEL PEAK 49(XP11.3) WILD-TYPE     17     36     16     39
D79V2, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                           5                            17
  CLUS_2                          20                            36
  CLUS_3                           7                            16
  CLUS_4                          14                            39
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(XP11.3) MUTATED       33     70     42
  DEL PEAK 49(XP11.3) WILD-TYPE    160     92     93
D79V3, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          33                           160
  CLUS_2                          70                            92
  CLUS_3                          42                            93
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(XP11.3) MUTATED       20     48     36
  DEL PEAK 49(XP11.3) WILD-TYPE    122     66     64
D79V4, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          20                           122
  CLUS_2                          48                            66
  CLUS_3                          36                            64
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(XP11.3) MUTATED       24     17     17
  DEL PEAK 49(XP11.3) WILD-TYPE     36     56     44
D79V5, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          24                            36
  CLUS_2                          17                            56
  CLUS_3                          17                            44
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(XP11.3) MUTATED       21     17      8     12
  DEL PEAK 49(XP11.3) WILD-TYPE     37     30     41     28
D79V6, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          21                            37
  CLUS_2                          17                            30
  CLUS_3                           8                            41
  CLUS_4                          12                            28
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(XP11.3) MUTATED       31     60     40     13
  DEL PEAK 49(XP11.3) WILD-TYPE     79     85    113     65
D79V7, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          31                            79
  CLUS_2                          60                            85
  CLUS_3                          40                           113
  CLUS_4                          13                            65
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(XP11.3) MUTATED       47     68     29
  DEL PEAK 49(XP11.3) WILD-TYPE    168    108     66
D79V8, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          47                           168
  CLUS_2                          68                           108
  CLUS_3                          29                            66
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(XP11.3) MUTATED       40     50     19     30
  DEL PEAK 49(XP11.3) WILD-TYPE    105     80    106     34
D79V9, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          40                           105
  CLUS_2                          50                            80
  CLUS_3                          19                           106
  CLUS_4                          30                            34
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(XP11.3) MUTATED       29     54     56
  DEL PEAK 49(XP11.3) WILD-TYPE     42    109    174
D79V10, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          29                            42
  CLUS_2                          54                           109
  CLUS_3                          56                           174
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(XP11.3) MUTATED       55     23     19
  DEL PEAK 49(XP11.3) WILD-TYPE     70     89     72
D79V11, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          55                            70
  CLUS_2                          23                            89
  CLUS_3                          19                            72
D79V12, binary
                               cls
clus                              0   1
  DEL PEAK 49(XP11.3) MUTATED    28  69
  DEL PEAK 49(XP11.3) WILD-TYPE 150  81
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 49(XP11.3) MUTATED     28   69
  DEL PEAK 49(XP11.3) WILD-TYPE  150   81
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          28                           150
  CLUS_2                          69                            81

Clustering(80) Variable = DEL PEAK 50(XQ22.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(XQ22.3) MUTATED       15      7      5     10
  DEL PEAK 50(XQ22.3) WILD-TYPE     27     45     27     18
D80V1, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          15                            27
  CLUS_2                           7                            45
  CLUS_3                           5                            27
  CLUS_4                          10                            18
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(XQ22.3) MUTATED        5      7     12     13
  DEL PEAK 50(XQ22.3) WILD-TYPE     17     49     11     40
D80V2, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                           5                            17
  CLUS_2                           7                            49
  CLUS_3                          12                            11
  CLUS_4                          13                            40
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XQ22.3) MUTATED       26     36     48
  DEL PEAK 50(XQ22.3) WILD-TYPE    167    126     87
D80V3, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          26                           167
  CLUS_2                          36                           126
  CLUS_3                          48                            87
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XQ22.3) MUTATED       13     25     37
  DEL PEAK 50(XQ22.3) WILD-TYPE    129     89     63
D80V4, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          13                           129
  CLUS_2                          25                            89
  CLUS_3                          37                            63
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XQ22.3) MUTATED       15     17     13
  DEL PEAK 50(XQ22.3) WILD-TYPE     45     56     48
D80V5, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          15                            45
  CLUS_2                          17                            56
  CLUS_3                          13                            48
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(XQ22.3) MUTATED       14     12     10      9
  DEL PEAK 50(XQ22.3) WILD-TYPE     44     35     39     31
D80V6, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          14                            44
  CLUS_2                          12                            35
  CLUS_3                          10                            39
  CLUS_4                           9                            31
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(XQ22.3) MUTATED       34     28     40      7
  DEL PEAK 50(XQ22.3) WILD-TYPE     76    117    113     71
D80V7, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          34                            76
  CLUS_2                          28                           117
  CLUS_3                          40                           113
  CLUS_4                           7                            71
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XQ22.3) MUTATED       45     34     30
  DEL PEAK 50(XQ22.3) WILD-TYPE    170    142     65
D80V8, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          45                           170
  CLUS_2                          34                           142
  CLUS_3                          30                            65
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(XQ22.3) MUTATED       37     43     12     14
  DEL PEAK 50(XQ22.3) WILD-TYPE    108     87    113     50
D80V9, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          37                           108
  CLUS_2                          43                            87
  CLUS_3                          12                           113
  CLUS_4                          14                            50
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XQ22.3) MUTATED       14     45     47
  DEL PEAK 50(XQ22.3) WILD-TYPE     57    118    183
D80V10, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          14                            57
  CLUS_2                          45                           118
  CLUS_3                          47                           183
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XQ22.3) MUTATED       40     23      9
  DEL PEAK 50(XQ22.3) WILD-TYPE     85     89     82
D80V11, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          40                            85
  CLUS_2                          23                            89
  CLUS_3                           9                            82
D80V12, binary
                               cls
clus                              0   1
  DEL PEAK 50(XQ22.3) MUTATED    29  43
  DEL PEAK 50(XQ22.3) WILD-TYPE 149 107
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 50(XQ22.3) MUTATED     29   43
  DEL PEAK 50(XQ22.3) WILD-TYPE  149  107
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          29                           149
  CLUS_2                          43                           107
> q(save="no")
