Pipeline Input Name	Archive Result File REF	Comment [TCGA Archive Name]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table25.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table12.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table17.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table7.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table1.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table23.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table3.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table21.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table9.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table5.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table19.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table14.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	supp.table1.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V4ex.png	clinical_Correlation-Clinical_Expression	Level_4	png	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V2ex.png	clinical_Correlation-Clinical_Expression	Level_4	png	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V10ex.png	clinical_Correlation-Clinical_Expression	Level_4	png	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V9ex.png	clinical_Correlation-Clinical_Expression	Level_4	png	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V11ex.png	clinical_Correlation-Clinical_Expression	Level_4	png	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V1ex.png	clinical_Correlation-Clinical_Expression	Level_4	png	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V3ex.png	clinical_Correlation-Clinical_Expression	Level_4	png	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V12ex.png	clinical_Correlation-Clinical_Expression	Level_4	png	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V13ex.png	clinical_Correlation-Clinical_Expression	Level_4	png	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V6ex.png	clinical_Correlation-Clinical_Expression	Level_4	png	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V7ex.png	clinical_Correlation-Clinical_Expression	Level_4	png	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V4ex.pdf	clinical_Correlation-Clinical_Expression	Level_4	pdf	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V6ex.pdf	clinical_Correlation-Clinical_Expression	Level_4	pdf	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V1ex.pdf	clinical_Correlation-Clinical_Expression	Level_4	pdf	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V3ex.pdf	clinical_Correlation-Clinical_Expression	Level_4	pdf	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V12ex.pdf	clinical_Correlation-Clinical_Expression	Level_4	pdf	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V10ex.pdf	clinical_Correlation-Clinical_Expression	Level_4	pdf	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V2ex.pdf	clinical_Correlation-Clinical_Expression	Level_4	pdf	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V9ex.pdf	clinical_Correlation-Clinical_Expression	Level_4	pdf	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V11ex.pdf	clinical_Correlation-Clinical_Expression	Level_4	pdf	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V13ex.pdf	clinical_Correlation-Clinical_Expression	Level_4	pdf	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V7ex.pdf	clinical_Correlation-Clinical_Expression	Level_4	pdf	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:data.file	PRAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_PRAD-TP.mRNAseq_Preprocess.Level_3.0.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:clinical.file	PRAD-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table25.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:clinical.file	PRAD-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table12.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:clinical.file	PRAD-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table17.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:clinical.file	PRAD-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table7.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:clinical.file	PRAD-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table1.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:clinical.file	PRAD-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table23.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:clinical.file	PRAD-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table3.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:clinical.file	PRAD-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table21.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:clinical.file	PRAD-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table9.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:clinical.file	PRAD-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table5.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:clinical.file	PRAD-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table19.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:clinical.file	PRAD-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	table14.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:clinical.file	PRAD-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	supp.table1.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:clinical.file	PRAD-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V4ex.png	clinical_Correlation-Clinical_Expression	Level_4	png	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
ClinicalAnalysisAllGenes_new:clinical.file	PRAD-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:58	Correlate_Clinical_vs_mRNAseq_2014041600	V2ex.png	clinical_Correlation-Clinical_Expression	Level_4	png	gdac.broadinstitute.org_PRAD-TP.Correlate_Clinical_vs_mRNAseq.Level_4.2014041600.0.0	yes
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