Unique Name	Descriptor	Wide Peak Limits	Peak Limits	Region Limits	q values	Residual q values after removing segments shared with higher peaks	Broad or Focal	Amplitude Threshold	TCGA-B7-5816-01A-21D-1598-02	TCGA-B7-5818-01A-11D-1598-02	TCGA-BR-4183-01A-02D-1128-02	TCGA-BR-4184-01A-01D-1128-02	TCGA-BR-4187-01A-01D-1128-02	TCGA-BR-4188-01A-01D-1128-02	TCGA-BR-4191-01A-02D-1128-02	TCGA-BR-4201-01A-01D-1128-02	TCGA-BR-4253-01A-01D-1128-02	TCGA-BR-4255-01A-01D-1128-02	TCGA-BR-4256-01A-01D-1128-02	TCGA-BR-4257-01A-01D-1128-02	TCGA-BR-4267-01A-01D-1128-02	TCGA-BR-4279-01A-01D-1128-02	TCGA-BR-4280-01A-01D-1128-02	TCGA-BR-4292-01A-01D-1128-02	TCGA-BR-4294-01A-01D-1128-02	TCGA-BR-4357-01A-01D-1154-02	TCGA-BR-4363-01A-01D-1154-02	TCGA-BR-4366-01A-01D-1154-02	TCGA-BR-4367-01A-01D-1154-02	TCGA-BR-4368-01A-01D-1154-02	TCGA-BR-4369-01A-01D-1154-02	TCGA-BR-4370-01A-01D-1154-02	TCGA-BR-6452-01A-12D-1798-02	TCGA-BR-6453-01A-11D-1798-02	TCGA-BR-6454-01A-11D-1798-02	TCGA-BR-6455-01A-11D-1798-02	TCGA-BR-6456-01A-11D-1798-02	TCGA-BR-6457-01A-21D-1798-02	TCGA-BR-6458-01A-11D-1798-02	TCGA-BR-6564-01A-12D-1880-02	TCGA-BR-6565-01A-11D-1798-02	TCGA-BR-6566-01A-11D-1798-02	TCGA-BR-6705-01A-12D-1880-02	TCGA-BR-6706-01A-11D-1880-02	TCGA-BR-6707-01A-11D-1880-02	TCGA-BR-6710-01A-11D-1880-02	TCGA-BR-6801-01A-11D-1880-02	TCGA-BR-6802-01A-11D-1880-02	TCGA-BR-6803-01A-11D-1880-02	TCGA-BR-6852-01A-11D-1880-02	TCGA-CD-5798-01A-11D-1598-02	TCGA-CD-5799-01A-11D-1598-02	TCGA-CD-5800-01A-11D-1598-02	TCGA-CD-5801-01A-11D-1598-02	TCGA-CD-5802-01A-11D-1598-02	TCGA-CD-5803-01A-11D-1598-02	TCGA-CD-5813-01A-11D-1598-02	TCGA-CG-4300-01A-01D-1154-02	TCGA-CG-4301-01A-01D-A326-26	TCGA-CG-4304-01A-01D-A326-26	TCGA-CG-4305-01A-01D-1154-02	TCGA-CG-4306-01A-01D-1154-02	TCGA-CG-4436-01A-01D-1154-02	TCGA-CG-4437-01A-01D-1798-02	TCGA-CG-4440-01A-01D-A326-26	TCGA-CG-4441-01A-01D-1798-02	TCGA-CG-4442-01A-01D-1154-02	TCGA-CG-4443-01A-01D-1154-02	TCGA-CG-4444-01A-01D-A326-26	TCGA-CG-4449-01A-01D-A326-26	TCGA-CG-4455-01A-01D-1154-02	TCGA-CG-4462-01A-01D-1154-02	TCGA-CG-4465-01A-01D-1154-02	TCGA-CG-4466-01A-01D-1154-02	TCGA-CG-4469-01A-01D-1154-02	TCGA-CG-4472-01A-01D-1154-02	TCGA-CG-4474-01A-02D-1154-02	TCGA-CG-4475-01A-01D-1154-02	TCGA-CG-4476-01A-01D-1154-02	TCGA-CG-4477-01A-01D-1154-02	TCGA-CG-5717-01A-11D-1598-02	TCGA-CG-5718-01A-11D-1598-02	TCGA-CG-5719-01A-11D-1598-02	TCGA-CG-5720-01A-11D-1598-02	TCGA-CG-5721-01A-11D-1598-02	TCGA-CG-5722-01A-21D-1598-02	TCGA-CG-5723-01A-11D-1598-02	TCGA-CG-5724-01A-11D-1598-02	TCGA-CG-5726-01A-11D-1598-02	TCGA-CG-5727-01A-11D-1598-02	TCGA-CG-5728-01A-11D-1598-02	TCGA-CG-5730-01A-11D-1598-02	TCGA-CG-5732-01A-11D-1598-02	TCGA-CG-5733-01A-11D-1598-02	TCGA-CG-5734-01A-11D-1598-02	TCGA-D7-5577-01A-01D-1598-02	TCGA-D7-5578-01A-01D-1598-02	TCGA-D7-5579-01A-01D-1598-02	TCGA-D7-6518-01A-11D-1798-02	TCGA-D7-6519-01A-11D-1798-02	TCGA-D7-6520-01A-11D-1798-02	TCGA-D7-6521-01A-11D-1798-02	TCGA-D7-6522-01A-11D-1798-02	TCGA-D7-6524-01A-11D-1798-02	TCGA-D7-6525-01A-11D-1798-02	TCGA-D7-6526-01A-11D-1798-02	TCGA-D7-6527-01A-11D-1798-02	TCGA-D7-6528-01A-11D-1798-02	TCGA-D7-6815-01A-11D-1880-02	TCGA-D7-6817-01A-11D-1880-02	TCGA-D7-6818-01A-11D-1880-02	TCGA-D7-6820-01A-11D-1880-02	TCGA-D7-6822-01A-11D-1880-02	TCGA-EQ-5647-01A-01D-1598-02	TCGA-F1-6874-01A-11D-1880-02	
Amplification Peak  1	1q42.3  	chr1:234797952-235344760(probes 1576:1594)    	chr1:234911616-235096972(probes 1583:1584)    	chr1:234826557-235347965(probes 1577:1595)    	0.033422	   0.033422		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	2	0	0	0	0	0	0	1	0	1	2	0	0	0	2	2	0	2	0	0	1	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	1	1	0	0	0	1	2	0	0	0	2	0	2	2	0	
Amplification Peak  2	6p21.1  	chr6:43508397-44379101(probes 6701:6724)        	chr6:43599396-43656923(probes 6704:6707)        	chr6:43532603-44391914(probes 6702:6726)        	0.013588	   0.013588		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	2	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	2	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	1	0	1	0	1	0	0	
Amplification Peak  3	7p11.2  	chr7:54995267-55593325(probes 7850:7869)        	chr7:55079144-55487227(probes 7853:7864)        	chr7:55036384-55777577(probes 7851:7873)        	0.0036851	  0.0036851		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	1	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	0	0	1	0	1	0	2	0	1	1	0	2	0	0	2	0	0	0	0	0	0	1	0	0	1	0	0	1	1	0	1	0	1	0	0	0	0	0	0	0	0	1	1	1	1	1	1	0	0	1	0	0	0	0	0	1	1	1	0	0	0	1	0	0	0	0	1	0	2	1	0	0	0	1	0	1	0	0	0	0	1	0	1	
Amplification Peak  4	7q21.2  	chr7:90901353-97945867(probes 8128:8235)        	chr7:91788888-92079923(probes 8145:8146)        	chr7:90865403-99219242(probes 8121:8251)        	0.00067742	 0.00067742		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	2	0	1	0	2	2	1	1	0	0	0	0	2	0	0	0	0	2	0	1	0	0	1	0	2	1	1	0	2	0	2	0	0	0	0	0	2	0	0	0	1	2	1	2	0	0	0	1	0	0	0	0	0	1	1	2	0	0	0	1	0	0	1	0	1	0	0	2	0	0	1	2	0	1	1	1	0	0	0	0	1	
Amplification Peak  5	8p23.1  	chr8:10975654-12724285(probes 8830:8842)        	chr8:11552479-12724284(probes 8839:8841)        	chr8:8661010-14022484(probes 8811:8846)          	0.0002302	  0.0002302		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	1	0	2	0	0	0	0	1	0	2	0	1	0	0	0	2	0	0	0	1	0	1	0	1	2	1	0	1	0	2	2	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	1	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	2	0	1	0	0	1	0	0	2	1	0	0	0	0	0	0	0	0	1	0	0	0	0	2	2	0	0	
Amplification Peak  6	8q24.21 	chr8:128070146-128865434(probes 9772:9795)    	chr8:128633156-128755114(probes 9791:9792)    	chr8:123884469-130939736(probes 9703:9841)    	4.5013e-06	 4.5013e-06		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	1	0	0	0	0	0	1	1	0	1	0	1	1	0	0	2	0	2	2	2	2	1	1	1	2	1	0	1	1	0	1	0	2	0	2	0	2	0	2	0	0	1	0	0	1	0	1	0	2	1	1	0	1	0	1	2	2	1	1	1	2	2	1	0	0	1	1	2	0	2	0	0	0	2	0	0	0	0	0	2	2	2	1	1	0	1	0	0	2	1	2	0	1	0	0	1	1	2	0	2	2	1	1	1	2	2	0	
Amplification Peak  7	10q26.13	chr10:122709888-123893564(probes 11664:11687)	chr10:123173306-123462606(probes 11673:11677)	chr10:122526102-123909587(probes 11649:11689)	0.0066236	  0.0066236		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	2	0	0	0	0	0	0	1	0	0	0	0	0	1	0	
Amplification Peak  8	11q13.3 	chr11:67821083-70533128(probes 12296:12357)    	chr11:68596356-69788580(probes 12321:12338)    	chr11:68596356-70099588(probes 12321:12343)    	0.11367	    0.11367		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	2	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak  9	12p12.1 	chr12:24832434-25872659(probes 12933:12944)    	chr12:25336355-25853175(probes 12934:12943)    	chr12:24633077-26574659(probes 12924:12960)    	0.00022798	 0.00022798		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	2	0	1	0	2	0	
Amplification Peak 10	12q15   	chr12:68032120-70574042(probes 13411:13482)    	chr12:68896851-69584420(probes 13444:13457)    	chr12:65268137-72885145(probes 13374:13516)    	3.6411e-06	 3.6411e-06		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	1	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	1	0	2	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	1	0	0	2	0	0	0	2	0	
Amplification Peak 11	13q22.1 	chr13:73543082-74325003(probes 14325:14374)    	chr13:73777505-73795944(probes 14352:14353)    	chr13:73629651-74022532(probes 14334:14364)    	0.06214	    0.06214		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	1	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	2	0	0	0	0	1	1	0	1	0	0	1	0	0	1	2	2	0	2	0	0	2	0	1	0	0	0	0	1	2	0	0	1	0	0	1	0	0	1	0	1	0	0	0	0	1	1	0	0	1	2	2	1	0	0	0	0	0	0	0	1	0	1	0	0	1	2	1	0	
Amplification Peak 12	15q26.1 	chr15:87285740-102531392(probes 15643:15754)  	chr15:90319949-90702283(probes 15670:15681)    	chr15:89997837-92287049(probes 15664:15696)    	0.096189	   0.096189		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	2	0	2	0	0	1	0	0	1	0	0	0	0	0	0	1	1	0	1	0	2	0	0	
Amplification Peak 13	17q12   	chr17:31682027-36884102(probes 16500:16552)    	chr17:33599987-33878109(probes 16518:16521)    	chr17:33599987-33974593(probes 16518:16524)    	0.17647	    0.23511		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	1	0	1	0	
Amplification Peak 14	17q12   	chr17:35621565-39490730(probes 16552:16567)    	chr17:37156334-39490729(probes 16565:16566)    	chr17:34931425-40351039(probes 16536:16598)    	0.0050612	  0.0071589		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	2	1	1	1	0	1	0	
Amplification Peak 15	18q11.2 	chr18:19444890-20134873(probes 17166:17207)    	chr18:19563371-19756416(probes 17173:17184)    	chr18:19226566-20698116(probes 17157:17215)    	0.0036851	  0.0036851		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	1	0	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	2	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	2	0	0	0	0	1	2	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	2	1	0	1	0	0	0	2	0	
Amplification Peak 16	19q12   	chr19:29845736-30461073(probes 18046:18069)    	chr19:30189868-30401284(probes 18056:18062)    	chr19:28641462-31646067(probes 18011:18101)    	6.1855e-10	 6.1855e-10		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	2	0	0	2	0	0	0	2	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	2	0	2	1	0	1	1	0	0	0	2	2	2	0	0	2	0	2	2	0	
Amplification Peak 17	20q13.2 	chr20:51006785-53180923(probes 18996:19037)    	chr20:51900885-52669972(probes 19010:19021)    	chr20:49919724-53869679(probes 18975:19049)    	0.00024738	 0.00024738		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	1	1	0	0	2	1	0	1	0	0	0	0	1	0	2	2	0	2	0	0	2	0	0	0	2	1	1	0	1	0	1	0	0	1	1	0	2	0	0	1	0	1	1	1	0	0	2	1	1	1	1	0	2	0	2	1	0	2	1	2	1	0	0	2	1	1	0	1	1	0	0	2	0	0	0	0	0	1	1	2	0	1	2	0	0	1	2	0	1	0	1	0	0	0	1	2	2	2	1	1	0	2	2	2	1	
Deletion Peak 1	5q12.1 	chr5:59050959-59380706(probes 5787:5806)    	chr5:59260455-59314804(probes 5800:5803)    	chr5:59082311-59477395(probes 5788:5814)    	0.034943	 0.034943		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	0	1	1	0	0	0	1	0	0	0	1	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	1	0	0	0	1	1	1	1	1	1	0	1	2	1	0	
Deletion Peak 2	6p25.3 	chr6:1867395-2191114(probes 6431:6444)        	chr6:2066280-2115883(probes 6436:6437)        	chr6:2066280-2171877(probes 6436:6440)        	0.16428	  0.16428		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	1	0	0	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	1	1	1	0	0	0	1	0	0	1	1	0	0	0	2	0	0	
Deletion Peak 3	9p23   	chr9:9455034-9627050(probes 10023:10030)      	chr9:9504994-9520129(probes 10028:10029)      	chr9:9216404-9667289(probes 10019:10038)      	0.034943	 0.034943		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	1	1	0	0	1	1	1	0	0	1	1	0	1	0	0	0	0	0	1	1	0	0	0	1	1	1	0	0	1	1	0	0	1	1	0	0	2	1	1	0	0	1	1	0	0	0	1	0	1	0	0	0	
Deletion Peak 4	9p21.3 	chr9:21813062-22034981(probes 10153:10166)  	chr9:21864827-21973073(probes 10156:10161)  	chr9:21852134-22077505(probes 10154:10168)  	0.039807	 0.039807		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	1	1	1	0	0	0	0	0	1	1	0	0	0	0	1	1	0	1	1	1	0	0	0	1	0	1	0	0	0	1	0	1	1	1	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	1	2	1	0	0	1	1	0	0	2	1	0	0	0	0	0	
Deletion Peak 5	16q23.1	chr16:78583111-78667556(probes 16170:16188)	chr16:78620779-78636643(probes 16179:16182)	chr16:78583110-78680134(probes 16169:16191)	0.034943	 0.034943		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	1	0	0	0	0	0	0	1	0	0	0	0	1	1	0	1	0	0	1	0	0	1	0	0	0	0	0	1	0	1	0	1	0	1	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	1	1	0	0	0	0	1	1	1	0	0	0	1	1	0	1	0	1	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	1	0	0	0	1	1	0	0	0	0	
Amplification Peak  1 - CN values	1q42.3  	chr1:234797952-235344760(probes 1576:1594)    	chr1:234911616-235096972(probes 1583:1584)    	chr1:234826557-235347965(probes 1577:1595)    	0.033422	   0.033422		Actual Copy Change Given	0.017414	-0.051408	1.68	-0.0086424	0	0.022192	0.059372	0.0028804	0.0021646	0.34516	0.0076102	0.69153	1.3866	0.007076	0.0032464	0.015887	0.95749	3.5838	-0.0021914	1.4087	0.051661	-0.0083783	0.35584	0.0017201	0	0.0010297	0.60455	0.0068442	-0.34763	0.025753	0.34696	-0.21608	0.31739	0.049659	0.21192	-0.018497	0.017156	0.011764	0.0070436	0.012691	0.0021586	0.0083692	0.011479	-0.057441	0.84547	-0.0065912	0.036566	0.064554	0.35645	0.0063919	0.0063228	0.00047537	0.0036283	0.02116	0.21757	0.22309	0.049166	-0.044325	0.011907	0.017118	-0.11536	4.3854	0.025371	0.0087713	-0.015502	0.84116	0.18494	0.4621	0	-0.1114	0.25444	-0.01769	0.0097202	0.0032088	0.11612	-0.0032244	0.0019521	0	6.0677e-05	-0.33346	0.012832	-0.017868	-0.42484	0.46622	0.056005	0.012184	0.0066091	-0.024616	0.28734	0.49985	-0.013141	-0.32882	0.69461	0.52696	0.00081914	0.003847	-0.036228	0.55532	2.3691	-0.10714	0.0035047	0.29792	2.0406	0.045013	1.3655	1.235	0.0058472	
Amplification Peak  2 - CN values	6p21.1  	chr6:43508397-44379101(probes 6701:6724)        	chr6:43599396-43656923(probes 6704:6707)        	chr6:43532603-44391914(probes 6702:6726)        	0.013588	   0.013588		Actual Copy Change Given	0.01902	0.015426	0.15219	0.28103	-0.0038721	-0.0026702	0.52087	0.0054323	0.01564	0.1245	0.0021885	0.18837	0.64751	0.0093517	0.0079881	0.013245	-0.90884	0.0055353	-0.63372	0.40635	0.10673	0.4024	0.10358	-0.0032155	0.0056623	0.0058525	0.24586	0.00092935	0.91143	0.4221	0.21039	-0.016374	0.72988	0.00052995	0.03192	-0.025802	0.00059611	0.013116	0.012499	0.0067266	0.019958	-0.020037	-0.054577	0.16216	-0.048219	0.0019488	0.036895	0.066511	0.091058	0	0.0090599	-0.0046967	-0.0065979	0.005032	0.15821	0.31416	0.086717	0.017624	0.0091963	0.11339	0	3.2082	0.07727	0.0024331	-0.0013147	0.13074	-0.01751	-0.00728	-0.0089537	-0.048106	0.011024	0.19387	0.044022	2.7413	-0.20169	0.0038199	-3.9013e-05	-0.039233	0	-0.13761	0.0027651	5.8847	0	2.9627	0.51217	0.01137	-0.049492	0.0080485	-0.20344	0.039038	0.14194	-0.73312	-0.34847	-0.22245	-0.0024918	0.00411	-0.14126	0.72645	0.86138	3.5398	0.83992	0	0.44806	0.24842	0.69444	-0.04969	-0.005858	
Amplification Peak  3 - CN values	7p11.2  	chr7:54995267-55593325(probes 7850:7869)        	chr7:55079144-55487227(probes 7853:7864)        	chr7:55036384-55777577(probes 7851:7873)        	0.0036851	  0.0036851		Actual Copy Change Given	0	0.66432	6	0.18986	0.14715	0.0045403	0.51548	-0.004014	-0.013536	-0.15443	-0.013199	0.20422	-0.003058	-0.0036097	0.015949	4.5241e-05	0.030182	-0.091374	0.0045061	0.010887	0.073802	0.40542	6	0.49176	0.014143	-0.0052788	0.56378	-0.0058046	0.66465	0.015299	6	-0.0046443	0.40801	0.34105	0.1385	6	0.059543	0.0046484	1.1532	-0.0025679	0.016407	-0.0042941	0.0028102	0.26165	0.24497	0.65136	0.021921	-0.113	0.38236	0.22334	0.0030374	0.61429	0.40382	-0.0013227	0.75393	0.0057318	0.89588	0.10383	-0.0052976	0.0049082	-0.2303	-0.010917	0.0051179	-0.011899	0.0035833	0.87938	0.78408	0.46941	0.32538	0.36208	0.67229	-0.028536	-0.014958	0.52421	0	-0.00049996	0.005776	0.030458	0.0057595	0.86766	0.81271	0.73774	0.01124	-0.018138	-0.028764	0.51476	0.096164	0.039558	0.26093	0.25075	0.37575	0.15273	0.90368	0.5965	0.0023634	0.019997	0.0060861	0.44771	-0.05078	0.61016	0.047188	-0.098528	-0.56225	0.2736	0.66629	0.011266	0.61787	
Amplification Peak  4 - CN values	7q21.2  	chr7:90901353-97945867(probes 8128:8235)        	chr7:91788888-92079923(probes 8145:8146)        	chr7:90865403-99219242(probes 8121:8251)        	0.00067742	 0.00067742		Actual Copy Change Given	0	0.69056	0.016389	0.1538	0.14715	0.0045403	0.51548	-0.004014	-0.023067	0.042964	-0.013199	0.20422	-0.0584	-0.0036097	0.015949	0.0052989	0.035535	0.32718	0.0045061	0.077474	0.073802	0.40542	0.14969	0.29101	0.014143	-0.0052788	5.9278	-0.0058046	0.65545	0.015299	6	2.2674	0.40801	0.34105	0.26778	0.11195	0.059543	0.0046484	1.1778	-0.0025679	0.016407	0.00898	0.0028102	3.4576	0.044736	0.65136	0.021921	-0.113	0.39257	0.22334	1.2661	0.61429	0.40382	-0.0013227	1.6098	0.0057318	0.91321	0.19872	-0.0052976	-0.84585	-0.001672	-0.010917	1.564	0.011664	0.0035833	0.03278	0.78408	3.9146	0.33916	6	0.21519	-0.00016136	-0.014958	0.61478	0	-0.00049996	0.005776	0.030458	-0.025709	0.86766	0.81271	1.1163	0.01124	-0.018138	-0.028764	0.49853	0.096164	-0.038826	0.33006	-0.22911	0.37575	0.12666	0.28153	2.2225	0.0023634	0.019997	0.67627	1.6472	0.19574	0.56578	0.47578	0.47294	-0.037414	-0.37154	-0.030573	0.011266	0.61787	
Amplification Peak  5 - CN values	8p23.1  	chr8:10975654-12724285(probes 8830:8842)        	chr8:11552479-12724284(probes 8839:8841)        	chr8:8661010-14022484(probes 8811:8846)          	0.0002302	  0.0002302		Actual Copy Change Given	0.42325	-0.041092	4.2131	0.19455	0.13226	0.0011646	-0.52456	0.4261	-0.028909	6	0.27389	0.78258	-0.009926	0.0071625	-0.006305	1.3035	-0.93045	-0.12999	-0.0032009	0.30619	-0.049448	0.40222	-0.27674	0.41497	0.96835	0.43225	-0.096274	0.68173	-0.36039	2.4172	6	-0.2292	-0.4616	0.084004	-0.087415	0.0048124	1.0226	-0.00158	-0.012637	0.24832	0.17862	0.34655	-0.073856	0.23954	-0.51808	-0.030156	-0.46531	0.06539	-0.3338	-0.042658	-0.40139	-0.010533	0.78756	-0.14132	-0.74443	0.20516	-0.3001	0.39402	0.63657	-0.85979	-0.44314	-0.61965	0.30537	0.21705	-0.036155	0.1053	0.77669	0.88549	-0.016325	-0.68535	0.5654	0.15892	0.041535	-0.61133	-0.010024	0.049144	-0.0099229	0.1981	-0.0027538	-0.28644	1.5876	-0.024844	0.40198	-0.67461	-0.35527	0.59795	-0.05254	-0.024029	6	0.33683	-0.22748	0.13401	-0.0088089	-0.21862	-0.0031929	0.25909	0	-0.96108	0.72183	-0.64535	-0.17129	0.2385	0.28367	4.8797	1.3466	-0.46757	-0.0089595	
Amplification Peak  6 - CN values	8q24.21 	chr8:128070146-128865434(probes 9772:9795)    	chr8:128633156-128755114(probes 9791:9792)    	chr8:123884469-130939736(probes 9703:9841)    	4.5013e-06	 4.5013e-06		Actual Copy Change Given	0.42325	-0.017188	-0.0016393	0.21464	0.13226	-0.0056914	0.7665	0.4261	-0.016114	0.35493	0.27389	0.78022	0.79967	0.0071625	0.015033	1.3035	-0.92875	1.3272	1.2368	1.3733	1.0175	0.40222	0.62006	0.35809	0.95878	0.43225	-0.02115	0.68173	0.58724	0.27659	0.36925	-0.00026486	1.1498	0.084004	2.7245	0.0048124	1.0226	-0.00158	1.1383	0.24832	0.17078	0.40836	0.025781	0.063376	0.88495	-0.050018	0.87254	0.13184	1.709	0.71114	0.40629	0	0.80617	0	0.80608	1.1479	6	0.47466	0.69516	0.82774	5.943	6	0.30537	0.21705	0.007831	0.63115	0.80843	0.96523	-0.016325	4.5009	0.031399	-0.019431	0.1879	1.6916	-0.010024	0.049144	-0.0099229	0.1981	0.014922	6	1.6244	1.4701	0.40198	0.69222	0.1839	0.57117	0.093956	-0.024029	1.861	0.58427	1.3976	0.17034	0.73455	-0.21862	-0.0031929	0.43141	0.44384	1.8337	-0.26306	0.92919	1.0901	0.34364	0.41851	0.39623	1.458	1.352	-0.0089595	
Amplification Peak  7 - CN values	10q26.13	chr10:122709888-123893564(probes 11664:11687)	chr10:123173306-123462606(probes 11673:11677)	chr10:122526102-123909587(probes 11649:11689)	0.0066236	  0.0066236		Actual Copy Change Given	-0.0089105	-0.036795	6	-0.097063	2.0449	0	0.21024	-0.0015445	-0.011629	0.16977	-0.0024706	-0.26929	-0.00036294	-0.35236	-0.0040208	-0.02034	0	-0.03604	0	0.81482	-0.17146	0.40591	-0.16374	0.0003706	-0.00096398	0.0036904	-0.047614	-0.0085313	0.62241	0.53042	-0.17873	0.21158	0.17052	-0.010082	0.01556	-0.03716	-0.03739	-0.015502	-0.0090419	-0.01149	1.375	-0.012858	-0.026139	-0.2747	0	0.34442	-0.45228	0.073998	0.13337	0.098638	-0.015749	0.58261	0.0022562	-0.0096834	-0.24699	-0.17582	-0.025913	-0.018761	-0.027337	0.87766	-0.27135	1.5159	-0.31177	-0.019796	-0.015241	-0.81746	0.14532	0.94048	-0.0135	-0.34708	0.20303	0.13068	-0.0043282	6	-0.037714	0.00056393	-0.00074595	-0.039182	0.0079788	0.069309	-0.014071	-0.031927	-0.025266	0.14732	0.39097	0	-0.069391	-0.0010812	0	0.026531	-0.12692	0.48463	2.0573	-0.22649	0.043399	-0.013143	0.028347	0.0095721	-0.31165	0.3436	-0.37296	-0.32568	0.0053967	-0.008359	-0.058435	0.46028	-0.0029504	
Amplification Peak  8 - CN values	11q13.3 	chr11:67821083-70533128(probes 12296:12357)    	chr11:68596356-69788580(probes 12321:12338)    	chr11:68596356-70099588(probes 12321:12343)    	0.11367	    0.11367		Actual Copy Change Given	0.013296	-0.0034523	-0.01245	-0.11847	0.017547	-0.0029576	-0.0084027	-0.0032228	-0.0032036	-0.0036713	-0.0005017	0.2035	-0.010912	-0.33759	0.011123	-0.0023487	-0.96861	0.27627	-0.0092653	0.78291	0.1669	0.40287	0.30823	-0.0057992	-0.0032583	0.0042166	1.2527	0.66104	0.088727	0.9997	0.029967	-0.01355	0.0039471	-0.0027471	-0.024692	0.012125	-0.0064492	-0.0013537	-0.0045933	-0.00077428	-0.0012705	0.009366	-0.019782	3.6045	0.039441	-0.010814	-0.41858	0.042779	-0.17141	0.32378	-0.27047	0.00094167	0	0.0099878	0	0.022948	-0.013138	0.047719	-0.017233	-0.12468	0.23937	1.1458	6	0.015828	0.013515	-0.0042857	-0.014035	0.48139	-0.01127	0	0.7159	-0.088064	0.034657	-0.048573	0.01353	0.04745	-0.0069043	0.19271	-0.0040334	1.7728	-0.003551	0.23721	0.026125	0.0034019	-0.024702	-0.0072716	0.078284	-0.040372	-0.14848	-0.061919	-0.12308	0.17291	-0.0047504	-0.19799	0.0073068	0	0.032154	-0.12061	-0.24687	-0.20524	-0.43231	-0.00062042	0	-0.04032	-0.095154	0.058644	-0.0055118	
Amplification Peak  9 - CN values	12p12.1 	chr12:24832434-25872659(probes 12933:12944)    	chr12:25336355-25853175(probes 12934:12943)    	chr12:24633077-26574659(probes 12924:12960)    	0.00022798	 0.00022798		Actual Copy Change Given	0.0080448	0.0056469	-0.13728	-0.013993	-0.0056788	0.0030105	0.0028327	0.0021605	0.0088619	6	0.0041888	-0.26589	-0.15088	0.0075178	0.01467	0	0.040858	-0.068968	0.0026757	0.049758	-0.013129	0.41495	0.015306	0	0.0060457	-0.0020378	0.61975	0.012641	-0.089335	0.03939	0.024931	0.0045089	-0.042945	0.1635	0.10395	0.0025611	-0.011572	0	1.1678	0.012661	-0.0072005	-0.010922	0.1108	0.31232	-0.3201	-0.00047023	6	0.22367	0.40225	0.069354	0.015614	0.0057602	-0.0015468	0.0067069	-0.1866	-0.00044514	0.052429	0.0018442	0	0.013427	0.19514	0.06055	-0.011883	-0.0022722	0.0058773	0.1209	0	6	0.27504	0.039529	-0.20261	-0.32701	-0.01528	0.0065071	-0.0099493	0.00094882	0.0049238	0.20821	0.0069626	0.8045	0.0060607	0.36707	0.015028	-0.080922	-0.52851	0.018612	0.0034891	0	0.30691	-0.18916	0.15139	6	0.018597	0.086969	0.03564	0.00037099	0.036497	0.21922	0.03103	-0.20475	0.091883	4.0993	-0.038738	0.66002	-0.73898	6	0.00667	
Amplification Peak 10 - CN values	12q15   	chr12:68032120-70574042(probes 13411:13482)    	chr12:68896851-69584420(probes 13444:13457)    	chr12:65268137-72885145(probes 13374:13516)    	3.6411e-06	 3.6411e-06		Actual Copy Change Given	0.0080448	0.050305	0.31619	0	-0.0056788	0.0030105	0.51231	0.0021605	0.0039007	0.0025789	0.0041888	-0.26589	0.56588	0.0075178	-0.0022611	0	0.07836	-0.066617	0.0026757	0.044834	-0.021799	0.41495	2.1872	0	0.0060457	-0.0020378	0.6218	0.012641	-0.089335	0.03939	0.024931	0.0045089	-0.042945	0.1635	-0.056204	0.0025611	-0.011572	0	0	0.012661	-0.0072005	0.018757	0.12006	0.31232	0.024795	-0.00047023	6	0.027306	0.3862	-0.19289	5.4677	0.0057602	-0.0015468	0.0067069	-0.4011	-0.00044514	0.052429	0.01569	0	-0.87328	1.086	0.012494	6	-0.0022722	0.0058773	0.1209	0	0.50015	0.27132	6	-0.21324	0.13365	-0.01528	0.035246	-0.0099493	0.00094882	0.0049238	0.20821	0.00633	0.11094	0.0060607	0.36696	0.012567	-0.080922	0.0044365	0.018612	0.0034891	0	0.24988	0.064895	0.10705	6	0.018597	0.086969	0.03564	0.00037099	0.0086941	0.6218	0.62999	-0.20475	0.091883	4.8616	-0.038738	0.008404	0.050879	6	0.00667	
Amplification Peak 11 - CN values	13q22.1 	chr13:73543082-74325003(probes 14325:14374)    	chr13:73777505-73795944(probes 14352:14353)    	chr13:73629651-74022532(probes 14334:14364)    	0.06214	    0.06214		Actual Copy Change Given	0.0095863	0.72034	0.093584	-0.12012	0.13384	0.32669	-0.010771	-0.013074	-0.014915	-0.15197	-0.0056329	0.17417	0.0089204	-0.017598	0.91674	-0.0040554	-0.61926	2.1254	-0.025416	-0.091557	0.11026	-0.023361	0.25424	-0.0049608	-0.0069871	0.22204	-0.11298	-0.015916	-0.065002	0.064311	-0.016884	-0.2132	0.29892	0.32148	-0.10618	-0.0059622	0.5234	0.0075252	2.2392	-0.0067879	-0.0081158	-0.0025725	0	0.36896	0.83649	-0.007679	0.42394	0.016593	-0.13087	0.3813	-0.38331	0.0092565	0.3801	1.0087	1.5412	-0.31797	1.2292	0.0069192	0.0070797	2.801	-0.5933	0.8416	-0.035115	0.0097128	-0.0093833	-0.23848	0.79333	0.97731	0.26707	-0.29992	0.63118	-0.010436	-0.073052	0.56141	0.23653	-0.060425	0.52327	-0.042515	0.33562	0.031116	-0.039555	0.045685	-0.019728	0.64451	0.30826	-0.024554	0.20435	0.45638	0.98805	3.4525	0.50468	0	-0.29221	0.0024345	-0.0064768	0.163	-0.58335	0.20546	0.4995	0.014155	0.73324	-0.025016	0.079887	0.3235	2.4294	0.43705	-0.0069645	
Amplification Peak 12 - CN values	15q26.1 	chr15:87285740-102531392(probes 15643:15754)  	chr15:90319949-90702283(probes 15670:15681)    	chr15:89997837-92287049(probes 15664:15696)    	0.096189	   0.096189		Actual Copy Change Given	-0.017311	-0.023467	0.18771	-0.0068225	-0.010441	0.0014399	0.18504	0.0052835	-0.015401	-0.0030833	0.0069705	-0.26696	0.81147	0.0028019	-0.0053017	-0.054734	-0.67282	1.4136	0.0024473	-0.056351	0.026944	-0.0048812	0.20798	0.0033833	0.0015328	0	1.6813	-0.0074167	-0.10258	-0.087147	0.33754	0	-0.060881	0	0	-0.027765	-0.033893	-0.016934	-0.0065164	-0.0030227	-4.7526e-05	-0.020569	0.0405	0.22547	0.68339	-0.26606	-0.0018038	0.050767	-0.26575	-0.17188	-0.0064892	-0.065533	-0.0064888	-0.010505	-0.42905	0.27857	-0.27257	-0.013034	-0.016989	0.048032	3.9655	1.6881	-0.037065	-0.024137	-0.024926	-0.37264	0.020133	-0.025499	0.10666	-0.0013056	0.20717	0.12763	-0.00064098	-0.016469	0.65587	0.0017161	0.0039076	-0.035625	0.0086437	0.12559	-0.0042981	0.39	-0.012886	0.51682	1.27	0.011739	1.1641	0.014771	-0.23072	0.4434	-0.15357	0.14753	0.66176	-0.1153	-0.02267	-0.011986	0.21899	-0.31665	-0.47165	0.38678	0.30282	-0.35626	0.36501	0.0093197	1.3547	0.28167	0.00089236	
Amplification Peak 13 - CN values	17q12   	chr17:31682027-36884102(probes 16500:16552)    	chr17:33599987-33878109(probes 16518:16521)    	chr17:33599987-33974593(probes 16518:16524)    	0.17647	    0.23511		Actual Copy Change Given	-0.016429	0.7063	0.048756	-0.0071687	-0.029879	0.022707	0.017248	-0.0031185	-0.010246	0.0034293	0.016992	-0.2565	0.8018	-0.00031003	-0.011122	-0.06041	-0.34164	-0.11548	0.0031301	-0.066745	-0.15554	0	0.16397	0.0079738	0.0047209	0.0035575	0.54598	0.001958	-0.086495	0.028312	-0.35581	0.0052968	0.23104	0.0042679	0.024499	-0.044935	-0.041999	-0.017495	0.0041651	0.011509	0.022746	-0.03343	0.027506	6	0.58368	0.043716	-0.0067616	0.0326	0.079208	0.18826	0.18219	0.0055344	0.003494	-0.0088321	0.18214	0.09307	0.01062	-0.032199	-0.019786	0.010608	-0.17994	-0.64497	0.27114	-0.036911	-0.02835	0.071239	0.05323	-0.024918	-0.0050498	0.39209	0	0.16512	0.030798	0.033205	0.3841	-0.0069125	-0.014539	0.1966	0.0016659	1.0802	0.0089463	0.0049238	-0.014657	6	0.051093	0.041693	-0.079024	0.045555	-0.059387	-0.26028	-0.035773	-0.3171	-0.036165	0.043194	-0.024768	0.0085533	0.16542	0.35601	0.2949	-0.26367	0.014151	0.31892	0.32779	0.476	-0.060603	0.50863	0.012556	
Amplification Peak 14 - CN values	17q12   	chr17:35621565-39490730(probes 16552:16567)    	chr17:37156334-39490729(probes 16565:16566)    	chr17:34931425-40351039(probes 16536:16598)    	0.0050612	  0.0071589		Actual Copy Change Given	-0.016429	0.69953	0.048756	-0.0071687	-0.029879	0.022707	0.017248	-0.0031185	-0.010246	0.0034293	0.016992	-0.2565	0.041968	-0.00031003	-0.011122	-0.06041	-0.34164	0.68302	0.0031301	-0.066745	-0.15554	0	3.1757	0.0079738	0.0047209	0.0035575	0.54598	0.001958	-0.086495	0.028312	-0.35581	0.0052968	2.8687	0.0042679	0.024499	-0.044935	-0.041999	-0.017495	0.0041651	0.011509	0.022746	-0.03343	0.027506	-0.35107	1.1311	0.043716	-0.0067616	0.0326	0.079208	2.3627	0.18219	0.0055344	0.003494	-0.0088321	0.18214	0.09307	0.44577	-0.032199	-0.019786	0.010608	1.2044	0.075413	0.27114	-0.036911	-0.02835	0.063111	0.05323	-0.024918	-0.0050498	0.30835	0	0.16512	0.030798	0.52284	0.3841	-0.0069125	-0.014539	0.1966	0.0016659	1.6425	0.0089463	-0.38146	-0.014657	-0.021827	0.69544	0.041693	-0.079024	0.045555	-0.059387	-0.26028	-0.035773	-0.3171	-0.036165	0.043194	-0.024768	0.0085533	0.16542	3.8531	0.2949	-0.26367	6	0.31892	0.32779	0.476	-0.060603	0.50863	0.012556	
Amplification Peak 15 - CN values	18q11.2 	chr18:19444890-20134873(probes 17166:17207)    	chr18:19563371-19756416(probes 17173:17184)    	chr18:19226566-20698116(probes 17157:17215)    	0.0036851	  0.0036851		Actual Copy Change Given	-0.015144	-0.025421	0.00096952	0.5374	-0.011166	0.8336	0.49901	-0.02307	0.0012222	-0.1756	-0.0017474	0.70057	-0.00373	-0.33495	-0.0032852	-0.016568	-0.90194	0.23239	-0.019872	0.15419	2.3484	0.094466	1.155	-0.0051343	-0.012094	-0.0014602	0.62537	-0.016482	-0.35051	0.045752	0.00097974	0.81266	0.4229	-0.024015	-0.063413	-0.057749	-0.016394	-0.0066507	-0.0057381	-0.0061167	-0.10622	-0.019257	0.18504	0.86183	0.91131	-0.27916	0.012055	-0.2046	-0.1981	0.29674	0.33117	0.00090433	-0.0145	-0.013842	-0.24802	-0.25092	0.46934	-0.010663	-0.011001	-0.015225	-0.22863	2.8598	-0.033807	-3.5123e-05	-0.010609	-0.32499	0.83429	2.0036	0.30074	-0.33155	0.72082	-0.35098	-0.14888	-0.010244	-0.033103	-0.0092568	-0.01697	-0.043446	0.010435	0.38161	-0.017955	0.097239	-0.010731	-0.028074	0.016853	-0.036112	-0.077783	0.030981	0.14633	0.058749	0.24501	-0.76176	0.0032119	0.10178	-0.0071281	-0.058845	1.1409	0.52466	4.8562	0.51055	-0.16894	0.32573	-0.09664	-0.024715	-0.0053266	6	-0.011648	
Amplification Peak 16 - CN values	19q12   	chr19:29845736-30461073(probes 18046:18069)    	chr19:30189868-30401284(probes 18056:18062)    	chr19:28641462-31646067(probes 18011:18101)    	6.1855e-10	 6.1855e-10		Actual Copy Change Given	-0.018769	-0.026457	-0.097104	0.05529	-0.049144	0.029352	0.029141	-0.026345	0.37291	0.023745	0.01126	-0.24076	-0.017745	0	-0.021783	-0.057526	-0.02702	3.5981	0.013036	6	0.19516	0.074172	0.99713	0.025593	0.0055482	-0.0030276	1.2875	-0.021886	0.73179	-0.0098059	0.3097	-0.0024382	-0.4566	0.052149	0.016741	0.015249	-0.042883	-0.024855	-0.031943	-0.0083817	0.28572	-0.045696	0.051287	-0.061426	6	0.043413	6	-0.074161	1.2457	-0.11044	-0.024214	0.0028997	0.00464	-0.043747	0.14645	0.0060302	-0.30929	-0.057852	-0.044193	0.065215	3.0885	6	-0.061071	-0.057957	-0.041167	-0.43733	0.049209	-0.047795	0.34446	0.96677	-0.28518	0.11232	0	-0.074351	-0.031376	-0.0016911	-0.0060497	0.43589	0.010662	-0.11116	-0.0072605	-0.0038487	-0.041808	0.42951	-0.5258	0.073341	0.055422	1.3115	0.1617	6	0.62878	0.06199	0.67195	0.38022	-0.023098	0.010727	-0.11534	5.9309	3.9615	6	-0.042871	-0.3652	6	-0.4005	1.3192	1.5327	0	
Amplification Peak 17 - CN values	20q13.2 	chr20:51006785-53180923(probes 18996:19037)    	chr20:51900885-52669972(probes 19010:19021)    	chr20:49919724-53869679(probes 18975:19049)    	0.00024738	 0.00024738		Actual Copy Change Given	-0.02338	-0.048854	0.43614	0.81128	0.12495	0.0043178	2.0757	0.34339	-0.05014	0.33212	0.0003072	0.16589	-0.011861	-0.16935	0.73283	-0.077924	1.7422	1.2103	-0.018079	6	0.29043	-0.023492	1.9086	0.0016898	0.0024459	0.14178	2.6689	0.6615	0.72353	0.28268	0.8464	0.20868	0.82849	-0.002427	-0.0027959	0.33157	0.47608	-0.029745	1.1674	-0.0097933	0.01854	0.31428	-0.02428	0.31333	0.43784	0.48881	-0.042651	0.049814	1.0651	0.83491	0.76841	0.6096	0.42191	-0.022224	0.95269	0.28432	2.0117	0.58657	-0.035208	4.6379	0.63353	1.5476	0.58381	-0.032378	-0.028844	1.644	0.80008	0.65199	0.0036559	0.70085	0.70603	0.14613	0.041302	1.4454	0.19755	-0.095038	-0.062763	0.21982	-0.35519	0.63036	0.80261	1.8946	-0.048611	0.49461	2.9997	-0.0091721	0.060549	0.5236	1.0913	0.24968	0.45704	0.16618	0.65753	0.27049	-0.025528	-0.014251	0.46562	0.96346	6	1.3955	0.50015	0.39522	-0.037086	6	1.3242	6	0.58554	
Deletion Peak 1 - CN values	5q12.1 	chr5:59050959-59380706(probes 5787:5806)    	chr5:59260455-59314804(probes 5800:5803)    	chr5:59082311-59477395(probes 5788:5814)    	0.034943	 0.034943		Actual Copy Change Given	0.0092605	0.015868	-0.25522	0.023161	-0.00077686	-0.0026963	0.51588	0	0.0099835	0	-0.0034487	-0.29031	0.010382	0.0069719	0	-0.64362	0.033137	-0.016872	2.1147e-05	-0.79617	-0.45356	-0.010467	-0.024987	-0.0078491	-0.003159	-0.0029607	-0.10323	-0.0047033	0.13141	0	-0.33908	0.0001112	-1.0384	-0.0082273	-0.031985	0	0.030222	0.0086996	0.0069387	0.0082719	0.0089101	0.041086	-0.017482	-0.0024614	-0.28367	-0.28928	-0.39461	0.038926	-0.018195	-0.037943	0.0088581	-0.59101	-0.0012546	0.0070186	-0.57991	0.024809	-0.57986	-1.2409	0.0084034	0.0080791	-0.19052	-0.61372	-0.28339	0.011992	0.026437	-0.82262	0.0092432	-0.013102	-0.02366	-0.31452	-0.035324	-0.33183	-0.080999	-0.52333	0.014395	-0.001683	0.0056188	-0.040304	-0.00313	0	-0.0046384	-0.020245	0.010761	0.34031	-0.34875	-0.0051641	-0.09785	-0.026087	-1.0769	-0.66426	0.011025	0.13883	-0.32083	-0.14124	0.0048659	-0.0039974	-0.5635	-1.1611	-0.55264	-0.55825	-0.74556	-0.3369	0.050309	-0.41794	-1.4189	-0.48343	-0.0020864	
Deletion Peak 2 - CN values	6p25.3 	chr6:1867395-2191114(probes 6431:6444)        	chr6:2066280-2115883(probes 6436:6437)        	chr6:2066280-2171877(probes 6436:6440)        	0.16428	  0.16428		Actual Copy Change Given	-0.46211	0.015426	0.20723	0.28103	-0.0038721	-0.0026702	0.0024259	0.0054323	0.01564	0.1245	0.0021885	0.18837	0.6264	0.0093517	0.0079881	0.013245	-0.90884	-0.65064	-0.6236	-1.182	0.10673	0.40343	-0.54394	-0.0032155	0.0056623	0.0058525	0.24586	0.00092935	-0.34948	-0.11025	-0.31917	-0.016374	0.42231	0.00052995	-0.037673	-0.025802	0.00059611	0.013116	-0.016003	0.0067266	0.019958	-0.020037	-0.054577	0.15705	-0.372	0.0019488	-0.44807	0.066511	0.29713	0	0.0090599	-0.0046967	-0.0065979	0.005032	0.15821	-0.32199	0.086717	-0.61402	0.0091963	0.022229	-0.17875	-0.052166	-0.47412	0.0024331	-0.0013147	0.13074	-0.0077982	-0.00728	-0.0089537	0.19328	0.011024	-0.10473	0.044022	0.027532	-0.20169	0.0038199	-3.9013e-05	-0.039233	0	-0.13761	0.0027651	-0.37665	0	-0.03704	-0.51482	0.01137	-0.049492	0.0080485	-0.20344	-0.27887	-0.32163	-0.77155	-0.41202	-0.22245	-0.0024918	0.00411	-0.67931	0.15152	0.21205	-0.65898	-0.81075	0	0.38879	0.24842	-1.3808	0.46826	0.015364	
Deletion Peak 3 - CN values	9p23   	chr9:9455034-9627050(probes 10023:10030)      	chr9:9504994-9520129(probes 10028:10029)      	chr9:9216404-9667289(probes 10019:10038)      	0.034943	 0.034943		Actual Copy Change Given	-0.0084945	-0.012652	-0.62153	-0.022306	-0.0075383	-0.40516	-1.0115	0.0030609	-0.56191	-0.18393	0.0013004	-0.27448	1.6991	-0.014791	-0.0018128	0.64842	0.027415	0.77268	0.00058802	-0.041097	-0.35677	-0.010181	-0.65432	-0.0020632	-0.0021211	-0.37296	-0.83109	0.0014627	-0.15451	-0.16544	-0.69375	-0.22936	0.051502	-0.45832	-0.062544	-0.039161	0.029163	-0.009691	-0.02489	-0.0066635	0.0050533	0	0.093805	-0.47861	-0.30889	0.22985	-0.00025318	-0.21402	0	-0.025983	-0.3934	0.58773	-0.0058026	-0.012196	0.32768	-0.82448	-0.59326	-0.029261	-0.038087	-0.87014	-0.9273	-0.60939	-0.23884	-0.014633	-0.67515	-0.8427	-0.05455	-0.51561	-0.013427	-0.032765	-0.27346	0.17277	-0.018287	-0.57094	-0.39009	-0.013357	-0.010971	-0.030092	-0.94061	-0.87469	-0.81883	-0.02387	0.0073997	-0.58993	-0.42777	-0.00023419	-0.27644	-0.49532	-0.40443	0.068936	-0.034157	-1.5	-0.7013	-0.4871	-0.011259	-0.0072407	-0.58428	-0.84213	-0.27424	0.54587	-0.17813	-0.33784	0.51362	-0.71866	1.4613	0.41697	-0.0027104	
Deletion Peak 4 - CN values	9p21.3 	chr9:21813062-22034981(probes 10153:10166)  	chr9:21864827-21973073(probes 10156:10161)  	chr9:21852134-22077505(probes 10154:10168)  	0.039807	 0.039807		Actual Copy Change Given	-0.0084945	-0.012652	-0.2818	-0.022306	-0.0075383	0.002078	-0.51642	0.0030609	-0.013353	-0.18393	0.0013004	-0.27448	0.0024023	-0.014791	-0.0018128	0.64842	0.027415	-0.085775	0.00054331	-0.16347	-0.35677	-0.010181	-0.65432	-0.0020632	-0.0021211	-0.0045499	-0.42133	0.0014627	-0.15451	-0.16544	-0.34443	-0.22936	0.051502	-0.029225	-0.062544	-0.039161	0.46541	-0.009691	-0.02489	-0.0066635	-0.412	0	-0.33984	-0.46624	-0.30889	0.22985	0.054588	-0.21402	0	-0.025983	-0.40717	-1.187	-0.0058026	-0.012196	0.32768	-0.027331	-1.2726	-1.2491	-0.012149	-0.86966	-0.57905	-0.60939	-0.23884	-0.014633	-0.0080697	-0.8427	-0.0028512	-1.0006	-0.013427	-0.032765	-0.27346	-0.8677	-0.018287	-0.57094	-0.39009	-1.2809	-0.010971	-0.030092	-0.048285	-0.1088	0	-0.02387	0.0073997	-0.58993	-0.42777	-0.00023419	-0.27644	-0.0038674	-0.40443	-0.17708	0.051324	-0.9371	-1.3536	-0.4871	-0.011259	-0.0072407	-0.58428	-0.84213	-0.27424	0.54587	-1.5	-0.33784	0.49233	-0.28013	1.4613	0.41697	-0.0027222	
Deletion Peak 5 - CN values	16q23.1	chr16:78583111-78667556(probes 16170:16188)	chr16:78620779-78636643(probes 16179:16182)	chr16:78583110-78680134(probes 16169:16191)	0.034943	 0.034943		Actual Copy Change Given	-0.07121	-0.75575	-0.26106	0.037881	-0.026871	0.010231	-0.00036065	-0.0093531	-0.61433	-0.17254	-0.003087	0.18333	-0.0068306	-0.34246	-1.1275	-0.055884	-0.94637	-0.14171	-0.00028849	-0.77712	-0.18686	0.42721	-0.5694	0.0075165	-0.0070314	0.0019846	0.22202	-0.014985	-0.36489	-0.041358	-0.99999	-0.23439	-0.39272	-0.013941	-0.30498	-0.33833	-0.055997	-0.046596	-0.023522	-0.029677	0.0025024	-0.03016	-0.056829	-0.033317	-1.1656	0.20424	-0.48009	-0.26405	0.018509	0.05021	-0.01194	-0.0037439	-0.45585	-0.053904	-0.31482	-0.73176	0.0053248	-0.18588	-0.29778	0.051776	-0.3241	-0.63208	-0.32428	0.17077	-0.037715	0.041643	-0.75809	-0.48899	-0.011252	-0.35523	-0.27431	-0.40517	0.0040067	-0.11909	0.28417	0.0012512	0.0015313	0.18848	-0.48626	-1.2099	-0.02138	-0.79314	-0.031868	0.12124	-0.13518	-0.012578	-0.1587	-1.271	0.029944	-0.27689	-0.096869	-0.79267	-0.073946	0.24338	-0.032374	-0.018388	-0.80614	-0.33269	-0.21998	0.0048812	-0.028084	-0.3558	-0.83386	-0.087575	-0.10003	0	-0.0096103	
