[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"         "-nVNozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "dx" ""  
[1] "dx" " " 
[1] "dx" " " 
[1] "Time to Death"
[1] "AGE"
[1] "NEOPLASM.DISEASESTAGE"
[1] "PATHOLOGY.T.STAGE"
[1] "PATHOLOGY.N.STAGE"
[1] "PATHOLOGY.M.STAGE"
[1] "GENDER"
[1] "HISTOLOGICAL.TYPE"
[1] "RADIATIONS.RADIATION.REGIMENINDICATION"
[1] "RADIATIONEXPOSURE"
[1] "EXTRATHYROIDAL.EXTENSION"
[1] "COMPLETENESS.OF.RESECTION"
[1] "NUMBER.OF.LYMPH.NODES"
[1] "MULTIFOCALITY"
[1] "TUMOR.SIZE"
[1] 6
                                       Clinical feature                        
Time to Death                          "Time to Death"                         
AGE                                    "AGE"                                   
NEOPLASM.DISEASESTAGE                  "NEOPLASM DISEASESTAGE"                 
PATHOLOGY.T.STAGE                      "PATHOLOGY T STAGE"                     
PATHOLOGY.N.STAGE                      "PATHOLOGY N STAGE"                     
PATHOLOGY.M.STAGE                      "PATHOLOGY M STAGE"                     
GENDER                                 "GENDER"                                
HISTOLOGICAL.TYPE                      "HISTOLOGICAL TYPE"                     
RADIATIONS.RADIATION.REGIMENINDICATION "RADIATIONS RADIATION REGIMENINDICATION"
RADIATIONEXPOSURE                      "RADIATIONEXPOSURE"                     
EXTRATHYROIDAL.EXTENSION               "EXTRATHYROIDAL EXTENSION"              
COMPLETENESS.OF.RESECTION              "COMPLETENESS OF RESECTION"             
NUMBER.OF.LYMPH.NODES                  "NUMBER OF LYMPH NODES"                 
MULTIFOCALITY                          "MULTIFOCALITY"                         
TUMOR.SIZE                             "TUMOR SIZE"                            
                                       Statistical test           
Time to Death                          "Cox regression test"      
AGE                                    "Spearman correlation test"
NEOPLASM.DISEASESTAGE                  "ANOVA test"               
PATHOLOGY.T.STAGE                      "Spearman correlation test"
PATHOLOGY.N.STAGE                      "t test"                   
PATHOLOGY.M.STAGE                      "ANOVA test"               
GENDER                                 "t test"                   
HISTOLOGICAL.TYPE                      "ANOVA test"               
RADIATIONS.RADIATION.REGIMENINDICATION "t test"                   
RADIATIONEXPOSURE                      "t test"                   
EXTRATHYROIDAL.EXTENSION               "ANOVA test"               
COMPLETENESS.OF.RESECTION              "ANOVA test"               
NUMBER.OF.LYMPH.NODES                  "Spearman correlation test"
MULTIFOCALITY                          "t test"                   
TUMOR.SIZE                             "Spearman correlation test"
                                       Significant genes
Time to Death                          "N=0"            
AGE                                    "N=387"          
NEOPLASM.DISEASESTAGE                  "N=435"          
PATHOLOGY.T.STAGE                      "N=164"          
PATHOLOGY.N.STAGE                      "N=1348"         
PATHOLOGY.M.STAGE                      "N=23"           
GENDER                                 "N=27"           
HISTOLOGICAL.TYPE                      "N=2246"         
RADIATIONS.RADIATION.REGIMENINDICATION "N=49"           
RADIATIONEXPOSURE                      "N=56"           
EXTRATHYROIDAL.EXTENSION               "N=368"          
COMPLETENESS.OF.RESECTION              "N=13"           
NUMBER.OF.LYMPH.NODES                  "N=1081"         
MULTIFOCALITY                          "N=0"            
TUMOR.SIZE                             "N=0"            
                                       Associated with               
Time to Death                          " "                           
AGE                                    "older"                       
NEOPLASM.DISEASESTAGE                  " "                           
PATHOLOGY.T.STAGE                      "higher stage"                
PATHOLOGY.N.STAGE                      "class1"                      
PATHOLOGY.M.STAGE                      " "                           
GENDER                                 "male"                        
HISTOLOGICAL.TYPE                      " "                           
RADIATIONS.RADIATION.REGIMENINDICATION "yes"                         
RADIATIONEXPOSURE                      "yes"                         
EXTRATHYROIDAL.EXTENSION               " "                           
COMPLETENESS.OF.RESECTION              " "                           
NUMBER.OF.LYMPH.NODES                  "higher number.of.lymph.nodes"
MULTIFOCALITY                          " "                           
TUMOR.SIZE                             " "                           
                                       &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
Time to Death                          " "                                                                                       
AGE                                    "N=386"                                                                                   
NEOPLASM.DISEASESTAGE                  " "                                                                                       
PATHOLOGY.T.STAGE                      "N=75"                                                                                    
PATHOLOGY.N.STAGE                      "N=133"                                                                                   
PATHOLOGY.M.STAGE                      " "                                                                                       
GENDER                                 "N=16"                                                                                    
HISTOLOGICAL.TYPE                      " "                                                                                       
RADIATIONS.RADIATION.REGIMENINDICATION "N=25"                                                                                    
RADIATIONEXPOSURE                      "N=24"                                                                                    
EXTRATHYROIDAL.EXTENSION               " "                                                                                       
COMPLETENESS.OF.RESECTION              " "                                                                                       
NUMBER.OF.LYMPH.NODES                  "N=25"                                                                                    
MULTIFOCALITY                          " "                                                                                       
TUMOR.SIZE                             " "                                                                                       
                                       Associated with                       
Time to Death                          " "                           " "     
AGE                                    "younger"                     "N=1"   
NEOPLASM.DISEASESTAGE                  " "                           " "     
PATHOLOGY.T.STAGE                      "lower stage"                 "N=89"  
PATHOLOGY.N.STAGE                      "class0"                      "N=1215"
PATHOLOGY.M.STAGE                      " "                           " "     
GENDER                                 "female"                      "N=11"  
HISTOLOGICAL.TYPE                      " "                           " "     
RADIATIONS.RADIATION.REGIMENINDICATION "no"                          "N=24"  
RADIATIONEXPOSURE                      "no"                          "N=32"  
EXTRATHYROIDAL.EXTENSION               " "                           " "     
COMPLETENESS.OF.RESECTION              " "                           " "     
NUMBER.OF.LYMPH.NODES                  "lower number.of.lymph.nodes" "N=1056"
MULTIFOCALITY                          " "                           " "     
TUMOR.SIZE                             " "                           " "     
