Clinical Features Time to Death AGE NEOPLASM.DISEASESTAGE PATHOLOGY.T.STAGE PATHOLOGY.N.STAGE PATHOLOGY.M.STAGE GENDER HISTOLOGICAL.TYPE RADIATIONS.RADIATION.REGIMENINDICATION NUMBER.OF.LYMPH.NODES nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q 1p gain 181 (19%) 790 0.41084 1 0.052898 1 0.76706 1 0.13136 1 0.41834 1 1 1 1 1 0.019212 1 0.029148 1 0.55145 1 1q gain 627 (65%) 344 0.50247 1 0.44686 1 0.030224 1 0.00084318 0.65 0.50756 1 0.81501 1 0.74919 1 0.019925 1 0.94111 1 0.92287 1 2p gain 110 (11%) 861 0.25527 1 0.79428 1 0.60669 1 0.62143 1 0.97723 1 0.83078 1 0.61434 1 3.7569e-05 0.0296 0.37339 1 0.17591 1 2q gain 69 (7%) 902 0.80653 1 0.93666 1 0.74587 1 0.26325 1 0.94026 1 1 1 1 1 0.03572 1 0.78429 1 0.28694 1 3p gain 129 (13%) 842 0.27467 1 0.20744 1 0.13207 1 0.043356 1 0.34919 1 0.00059522 0.461 1 1 0.010647 1 0.60342 1 0.92356 1 3q gain 191 (20%) 780 0.49077 1 0.51261 1 0.79369 1 0.18442 1 0.65574 1 0.042697 1 0.69653 1 1.2454e-05 0.00984 0.18326 1 0.1444 1 4p gain 74 (8%) 897 0.093498 1 0.55633 1 0.24827 1 0.089911 1 0.68415 1 0.32238 1 0.54912 1 0.037645 1 0.59451 1 0.68484 1 4q gain 70 (7%) 901 0.048722 1 0.75463 1 0.30891 1 0.21133 1 0.49426 1 0.33637 1 0.5285 1 0.004811 1 1 1 0.72835 1 5p gain 286 (29%) 685 0.10257 1 0.3153 1 0.50648 1 0.65986 1 0.0021308 1 0.01631 1 0.49201 1 0.45606 1 0.35354 1 0.5252 1 5q gain 189 (19%) 782 0.481 1 0.024163 1 0.56201 1 0.29539 1 0.2877 1 0.18343 1 1 1 0.80476 1 0.47566 1 0.6869 1 6p gain 184 (19%) 787 0.33573 1 0.74752 1 0.66692 1 0.11862 1 0.58628 1 0.78651 1 0.69746 1 0.00018422 0.144 0.087248 1 0.85054 1 6q gain 132 (14%) 839 0.32012 1 0.85238 1 0.61484 1 0.11154 1 0.083668 1 0.97512 1 1 1 0.00017305 0.135 0.25696 1 0.96442 1 7p gain 276 (28%) 695 0.59223 1 0.11087 1 0.85675 1 0.78181 1 0.8282 1 0.67737 1 0.035965 1 0.17969 1 0.2398 1 0.61882 1 7q gain 231 (24%) 740 0.85604 1 0.65674 1 0.48775 1 0.50187 1 0.51254 1 0.6856 1 0.26071 1 0.26804 1 1 1 0.90932 1 8p gain 259 (27%) 712 0.82115 1 0.72767 1 0.70334 1 0.83785 1 0.86845 1 0.39247 1 0.73157 1 0.60097 1 0.81057 1 0.81132 1 8q gain 478 (49%) 493 0.6587 1 0.78387 1 0.33495 1 0.8303 1 0.28804 1 0.066664 1 0.54095 1 1.1308e-06 0.000901 0.016255 1 0.76346 1 9p gain 127 (13%) 844 0.80898 1 0.70211 1 0.28291 1 0.56335 1 0.12299 1 0.73512 1 0.37605 1 0.64163 1 1 1 0.38972 1 9q gain 107 (11%) 864 0.17829 1 0.87439 1 0.68838 1 0.53163 1 0.20653 1 0.90764 1 0.61287 1 0.30499 1 0.65312 1 0.6431 1 10p gain 193 (20%) 778 0.86875 1 0.52147 1 0.24592 1 0.30005 1 0.26455 1 0.26788 1 0.69645 1 0.00028043 0.218 0.04138 1 0.84789 1 10q gain 112 (12%) 859 0.80953 1 0.35327 1 0.38596 1 0.29374 1 0.77952 1 0.68139 1 0.6155 1 0.046685 1 0.076056 1 0.63355 1 11p gain 127 (13%) 844 0.64504 1 0.95335 1 0.96698 1 0.71329 1 0.21045 1 0.94944 1 1 1 0.030967 1 1 1 0.20247 1 11q gain 88 (9%) 883 0.1907 1 0.9168 1 0.24981 1 0.7385 1 0.41435 1 0.60947 1 0.61242 1 0.003673 1 0.6225 1 0.54154 1 12p gain 209 (22%) 762 0.20357 1 0.76423 1 0.64004 1 0.14159 1 0.082726 1 0.60711 1 0.043091 1 0.041235 1 0.30207 1 0.088917 1 12q gain 176 (18%) 795 0.12685 1 0.35249 1 0.1401 1 0.053098 1 0.0065937 1 0.27257 1 0.021335 1 0.13793 1 0.23277 1 0.058377 1 13q gain 84 (9%) 887 0.77237 1 0.27039 1 0.64441 1 0.41124 1 0.63278 1 0.12646 1 1 1 0.016915 1 0.3796 1 0.32184 1 14q gain 132 (14%) 839 0.5009 1 0.13452 1 0.30739 1 0.15447 1 0.093496 1 0.81978 1 0.374 1 0.23631 1 0.60641 1 0.13122 1 15q gain 83 (9%) 888 0.37809 1 0.71825 1 0.55825 1 0.81913 1 0.90474 1 0.59022 1 0.59258 1 0.017368 1 0.25471 1 0.4299 1 16p gain 431 (44%) 540 0.97978 1 0.019915 1 0.61931 1 0.88361 1 0.35927 1 0.88735 1 0.75772 1 0.075193 1 0.47739 1 0.81738 1 16q gain 121 (12%) 850 0.097472 1 0.54591 1 0.14917 1 0.33533 1 0.25568 1 0.25811 1 0.11765 1 0.090504 1 0.91479 1 0.45984 1 17p gain 98 (10%) 873 0.10852 1 0.81194 1 0.13417 1 0.018632 1 0.097741 1 0.34469 1 0.0015847 1 0.28405 1 0.059748 1 0.36047 1 17q gain 202 (21%) 769 0.032799 1 0.55704 1 0.81101 1 0.24568 1 0.68887 1 0.19886 1 0.0010394 0.8 0.17523 1 0.055249 1 0.6276 1 18p gain 156 (16%) 815 0.3412 1 0.20446 1 0.10364 1 0.39846 1 0.02747 1 0.14551 1 0.66712 1 0.015205 1 0.3866 1 0.5309 1 18q gain 134 (14%) 837 0.9179 1 0.63734 1 0.13639 1 0.23663 1 0.20519 1 0.015354 1 0.63618 1 0.082316 1 0.41309 1 0.87726 1 19p gain 162 (17%) 809 0.93928 1 0.95765 1 0.32697 1 0.16493 1 0.22623 1 0.075125 1 0.06894 1 0.16229 1 0.15469 1 0.14797 1 19q gain 195 (20%) 776 0.45544 1 0.041598 1 0.37246 1 0.70679 1 0.13333 1 0.0071639 1 0.12123 1 0.52145 1 0.37758 1 0.048544 1 20p gain 371 (38%) 600 0.15842 1 0.34049 1 0.26248 1 0.64753 1 0.020244 1 0.0046982 1 0.049669 1 1.2235e-06 0.000974 0.008819 1 0.6742 1 20q gain 404 (42%) 567 0.2112 1 0.893 1 0.38588 1 0.1171 1 0.074166 1 0.015782 1 0.33462 1 1.5315e-07 0.000122 0.073228 1 0.66144 1 21q gain 180 (19%) 791 0.0028732 1 0.10362 1 0.66432 1 0.69006 1 0.61955 1 0.30156 1 1 1 0.00067489 0.521 0.036481 1 0.24093 1 22q gain 89 (9%) 882 0.19878 1 0.90773 1 0.19607 1 0.12428 1 0.40349 1 0.38252 1 0.61201 1 0.01018 1 0.27077 1 0.36153 1 xq gain 127 (13%) 844 0.29953 1 0.23892 1 0.44167 1 0.46221 1 0.77396 1 0.059686 1 1 1 0.00037246 0.289 0.059601 1 0.73369 1 1p loss 222 (23%) 749 0.035796 1 0.0018077 1 1.3338e-05 0.0105 3.8326e-05 0.0302 0.0022203 1 0.35216 1 1 1 0.42328 1 0.61367 1 0.0096256 1 1q loss 51 (5%) 920 0.37755 1 0.37518 1 0.816 1 0.37722 1 0.049283 1 0.38047 1 1 1 0.23028 1 1 1 0.94361 1 2p loss 164 (17%) 807 0.74908 1 0.35894 1 0.37048 1 0.42872 1 0.035955 1 0.13932 1 1 1 0.41332 1 0.037712 1 0.48371 1 2q loss 184 (19%) 787 0.30708 1 0.44463 1 0.14878 1 0.42632 1 0.035924 1 0.10765 1 0.69746 1 0.31751 1 0.12595 1 0.2332 1 3p loss 169 (17%) 802 0.35838 1 0.045516 1 0.8335 1 0.0015389 1 0.89808 1 0.60083 1 0.22499 1 0.017482 1 0.019575 1 0.69131 1 3q loss 93 (10%) 878 0.14235 1 0.21511 1 0.31645 1 0.00059225 0.459 0.71876 1 0.69761 1 0.61089 1 0.080235 1 0.040483 1 0.13569 1 4p loss 314 (32%) 657 0.28993 1 0.35874 1 0.53338 1 0.029317 1 0.62087 1 0.36872 1 1 1 3.427e-06 0.00272 0.70565 1 0.9681 1 4q loss 279 (29%) 692 0.83027 1 0.95667 1 0.69356 1 0.067624 1 0.73978 1 0.298 1 0.29689 1 6.4951e-05 0.051 0.43592 1 0.85475 1 5p loss 126 (13%) 845 0.30643 1 0.019464 1 0.81983 1 0.076922 1 0.86013 1 0.85376 1 1 1 4.5412e-06 0.00361 0.20652 1 0.75774 1 5q loss 206 (21%) 765 0.29597 1 0.0012737 0.977 0.20608 1 0.0068411 1 0.36067 1 0.44847 1 0.13166 1 1.1846e-10 9.47e-08 0.48949 1 0.21634 1 6p loss 166 (17%) 805 0.57168 1 0.069187 1 0.84886 1 0.48486 1 0.8176 1 0.016043 1 1 1 0.67049 1 0.15893 1 0.086171 1 6q loss 245 (25%) 726 0.86241 1 0.00063389 0.49 0.68997 1 0.29228 1 0.49489 1 0.29456 1 0.46606 1 0.73652 1 0.0182 1 0.2883 1 7p loss 102 (11%) 869 0.60409 1 0.88105 1 0.44536 1 0.43471 1 0.039431 1 0.1666 1 0.6112 1 0.025447 1 0.35619 1 0.067839 1 7q loss 111 (11%) 860 0.17096 1 0.19748 1 0.53126 1 0.55122 1 0.22647 1 0.081391 1 0.6149 1 0.24663 1 0.43685 1 0.052418 1 8p loss 357 (37%) 614 0.026192 1 0.254 1 0.91167 1 0.19326 1 0.75241 1 0.41169 1 0.75343 1 6.4267e-05 0.0505 0.55768 1 0.39251 1 8q loss 81 (8%) 890 0.017245 1 0.13037 1 0.88508 1 0.50523 1 0.39118 1 0.55531 1 1 1 0.76251 1 0.098326 1 0.6723 1 9p loss 289 (30%) 682 0.022144 1 0.56374 1 0.0013563 1 0.00015999 0.125 0.023962 1 0.053202 1 0.17372 1 8.743e-06 0.00692 0.12269 1 0.73164 1 9q loss 261 (27%) 710 0.29633 1 0.60458 1 0.14526 1 0.002085 1 0.073757 1 0.5842 1 0.14384 1 0.00034946 0.272 0.055811 1 0.87064 1 10p loss 157 (16%) 814 0.021788 1 0.89307 1 0.070325 1 0.019541 1 0.14134 1 0.0049083 1 0.38011 1 0.10678 1 0.84777 1 0.37576 1 10q loss 208 (21%) 763 0.022047 1 0.92736 1 0.18568 1 0.016222 1 0.16256 1 0.018629 1 0.69838 1 0.038048 1 1 1 0.26611 1 11p loss 247 (25%) 724 0.18143 1 0.74548 1 0.10762 1 0.085816 1 0.026872 1 0.89318 1 1 1 0.13217 1 0.51629 1 0.14329 1 11q loss 330 (34%) 641 0.73172 1 0.73007 1 0.2349 1 0.31068 1 0.013981 1 0.44863 1 0.097697 1 0.39888 1 0.5509 1 0.50438 1 12p loss 137 (14%) 834 0.46451 1 0.61621 1 0.1442 1 0.028076 1 0.54036 1 0.082718 1 1 1 0.015622 1 0.31011 1 0.15293 1 12q loss 114 (12%) 857 0.6935 1 0.045618 1 0.19084 1 0.010404 1 0.66841 1 0.22604 1 0.6168 1 0.0045731 1 0.38229 1 0.47218 1 13q loss 400 (41%) 571 0.033289 1 0.51235 1 0.7762 1 0.097321 1 0.85159 1 0.96162 1 0.74864 1 0.00057218 0.444 0.51818 1 0.18884 1 14q loss 236 (24%) 735 0.025636 1 0.8562 1 0.84286 1 0.060206 1 0.064325 1 0.88706 1 0.46576 1 0.00013614 0.107 0.28542 1 0.5115 1 15q loss 288 (30%) 683 0.081803 1 0.5447 1 0.4367 1 0.0079108 1 0.071111 1 0.29968 1 1 1 0.0012224 0.939 0.088575 1 0.70227 1 16p loss 149 (15%) 822 0.67466 1 0.577 1 0.14858 1 0.98193 1 0.056481 1 0.58078 1 0.65648 1 0.25085 1 0.4337 1 0.51201 1 16q loss 534 (55%) 437 0.064524 1 0.0011489 0.884 0.69121 1 0.58444 1 0.18397 1 0.19404 1 0.35895 1 8.7383e-12 6.99e-09 0.088615 1 0.44244 1 17p loss 523 (54%) 448 0.25646 1 0.025988 1 0.096276 1 0.0043216 1 0.79187 1 0.86221 1 0.52663 1 0.012913 1 1 1 0.77516 1 17q loss 251 (26%) 720 0.97625 1 0.09048 1 0.86817 1 0.43407 1 0.22621 1 0.41702 1 0.07208 1 0.0030751 1 0.9357 1 0.87929 1 18p loss 290 (30%) 681 6.7786e-06 0.00538 0.0047083 1 0.040087 1 0.014278 1 0.38989 1 0.82487 1 0.7318 1 0.038759 1 1 1 0.14209 1 18q loss 289 (30%) 682 0.0019818 1 0.0097099 1 0.052052 1 0.064095 1 0.11683 1 0.6234 1 0.73182 1 0.02408 1 0.44021 1 0.38758 1 19p loss 173 (18%) 798 0.092213 1 0.090891 1 0.90498 1 0.61386 1 0.48622 1 0.30319 1 1 1 1.1103e-05 0.00878 0.51801 1 0.59133 1 19q loss 146 (15%) 825 0.23655 1 0.98126 1 0.68533 1 0.51943 1 0.18618 1 0.35187 1 1 1 0.00013764 0.108 0.093292 1 0.56929 1 20p loss 84 (9%) 887 0.18074 1 0.15593 1 0.46372 1 0.090971 1 0.64119 1 0.3362 1 0.59717 1 0.0506 1 0.3796 1 0.44657 1 20q loss 48 (5%) 923 0.4162 1 0.062508 1 0.15143 1 0.024638 1 0.99446 1 0.32871 1 1 1 0.022231 1 0.51579 1 0.78891 1 21q loss 163 (17%) 808 0.66939 1 0.43416 1 0.040039 1 0.44688 1 0.027516 1 0.33658 1 0.38512 1 0.069237 1 0.50833 1 0.76166 1 22q loss 432 (44%) 539 0.1399 1 0.51663 1 0.82267 1 0.46356 1 0.3907 1 0.71246 1 0.35389 1 0.003978 1 0.0017238 1 0.24292 1 xq loss 162 (17%) 809 0.58404 1 0.10358 1 0.36314 1 0.039229 1 0.70992 1 0.11274 1 0.22453 1 0.093575 1 0.85009 1 0.082022 1