Clinical Features	METHLYATION_CNMF		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL		MIRSEQ_MATURE_CNMF		MIRSEQ_MATURE_CHIERARCHICAL	
	nCNV (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
1q gain	4 (14%)	24	1	1	1	1	0.60147	1	0.32593	1	0.35944	1	0.28	1	1	1
3p gain	5 (18%)	23	0.82271	1	1	1	1	1	1	1	0.52924	1	1	1	0.32615	1
3q gain	6 (21%)	22	0.69167	1	1	1	0.6345	1	1	1	0.67316	1	1	1	0.63819	1
6p gain	3 (11%)	25	1	1	1	1	1	1	0.59556	1	0.3262	1	0.75077	1	1	1
7p gain	8 (29%)	20	0.28675	1	1	1	0.40043	1	1	1	0.49912	1	1	1	0.41467	1
7q gain	7 (25%)	21	0.61576	1	0.67029	1	0.20746	1	0.67762	1	0.36546	1	1	1	1	1
10p gain	3 (11%)	25	1	1	0.58333	1	1	1	0.59556	1	0.5657	1	1	1	1	1
11p gain	4 (14%)	24	0.4778	1	0.6	1	0.2652	1	0.097778	1	0.7094	1	1	1	0.61254	1
11q gain	8 (29%)	20	0.54743	1	0.68599	1	0.19368	1	0.38454	1	0.22216	1	0.63223	1	1	1
12p gain	3 (11%)	25	1	1	0.58333	1	0.53297	1	1	1	0.90605	1	1	1	1	1
12q gain	4 (14%)	24	0.4778	1	1	1	0.2652	1	0.59556	1	0.7094	1	1	1	0.61254	1
16p gain	4 (14%)	24	0.4778	1	0.6	1	1	1	0.59556	1	0.43457	1	0.28	1	0.12821	1
16q gain	4 (14%)	24	0.09177	1	0.6	1	1	1	1	1	0.27571	1	1	1	0.61254	1
18p gain	5 (18%)	23	0.82271	1	1	1	1	1	1	1	0.83762	1	1	1	1	1
18q gain	5 (18%)	23	0.82271	1	1	1	1	1	1	1	0.83762	1	1	1	1	1
21q gain	6 (21%)	22	1	1	1	1	1	1	0.16473	1	0.014835	1	0.31371	1	0.12399	1
xq gain	3 (11%)	25	0.17949	1	1	1	0.53297	1	1	1	0.39288	1	0.75077	1	0.53504	1
1p loss	3 (11%)	25	1	1	1	1	1	1	0.59556	1	0.60711	1	1	1	1	1
6q loss	3 (11%)	25	1	1	1	1	0.53297	1	0.22222	1	0.60711	1	1	1	1	1
8p loss	4 (14%)	24	1	1	0.31111	1	0.11575	1	0.32593	1	0.55122	1	1	1	1	1
15q loss	5 (18%)	23	0.31233	1	0.63889	1	0.31502	1	0.64831	1	0.4331	1	1	1	0.62096	1
16q loss	4 (14%)	24	1	1	1	1	0.60147	1	1	1	0.57502	1	1	1	1	1
17p loss	3 (11%)	25	1	1	1	1	1	1	1	1	0.60711	1	0.75077	1	0.53504	1
xq loss	3 (11%)	25	0.17949	1	0.58333	1	0.28388	1	0.59556	1	0.1497	1	0.086154	1	0.2735	1