Clinical Features Time to Death AGE GENDER KARNOFSKY.PERFORMANCE.SCORE HISTOLOGICAL.TYPE RADIATIONS.RADIATION.REGIMENINDICATION nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q 1p gain 81 (14%) 479 0.23159 1 0.58795 1 0.62356 1 0.30705 1 0.14409 1 0.36833 1 1q gain 87 (16%) 473 0.56887 1 0.86429 1 0.4034 1 0.332 1 0.20118 1 0.38338 1 2p gain 36 (6%) 524 0.68787 1 0.89123 1 0.11144 1 0.49603 1 1 1 0.85415 1 2q gain 35 (6%) 525 0.57215 1 0.65089 1 0.28434 1 0.36316 1 1 1 1 1 3p gain 56 (10%) 504 0.96962 1 0.01922 1 0.39067 1 0.69901 1 0.49479 1 1 1 3q gain 61 (11%) 499 0.94078 1 0.048304 1 0.58101 1 0.6256 1 0.4166 1 0.77154 1 4p gain 36 (6%) 524 0.91486 1 0.27572 1 0.86024 1 0.093037 1 1 1 0.71241 1 4q gain 33 (6%) 527 0.95306 1 0.38466 1 0.46717 1 0.077041 1 1 1 0.4414 1 5p gain 49 (9%) 511 0.84317 1 0.55552 1 0.16847 1 0.20243 1 0.038916 1 0.63342 1 5q gain 41 (7%) 519 0.67534 1 0.52651 1 0.13411 1 0.69556 1 0.052882 1 0.49011 1 6p gain 23 (4%) 537 0.43186 1 0.56017 1 0.51386 1 0.50086 1 1 1 0.17071 1 6q gain 22 (4%) 538 0.37721 1 0.29349 1 0.82772 1 0.45155 1 1 1 0.48455 1 7p gain 454 (81%) 106 0.00010219 0.0482 2.7697e-06 0.00132 1 1 0.68019 1 0.015275 1 0.13286 1 7q gain 459 (82%) 101 0.00017455 0.0822 6.6773e-06 0.00318 0.36824 1 0.88005 1 0.02567 1 0.099549 1 8p gain 52 (9%) 508 0.70891 1 0.51245 1 0.65673 1 0.74935 1 0.89381 1 0.64165 1 8q gain 59 (11%) 501 0.56041 1 0.15438 1 0.48146 1 0.86174 1 0.9118 1 1 1 9p gain 47 (8%) 513 0.64336 1 0.83016 1 0.16332 1 0.9323 1 0.3171 1 0.74472 1 9q gain 71 (13%) 489 0.75081 1 0.94066 1 0.19509 1 0.61539 1 0.60245 1 1 1 10p gain 12 (2%) 548 0.0040552 1 0.0025608 1 0.070619 1 0.00058969 0.277 0.54271 1 1 1 10q gain 3 (1%) 557 0.47823 1 0.90554 1 0.5645 1 NA NA 1 1 0.23845 1 11p gain 17 (3%) 543 0.43399 1 0.75248 1 0.80589 1 0.5052 1 1 1 0.60054 1 11q gain 14 (2%) 546 0.14516 1 0.13635 1 0.267 1 0.13373 1 0.59931 1 0.24419 1 12p gain 58 (10%) 502 0.51783 1 0.18797 1 0.571 1 0.49589 1 0.91058 1 0.55213 1 12q gain 47 (8%) 513 0.86925 1 0.56131 1 0.27839 1 0.77082 1 0.54814 1 0.62437 1 13q gain 10 (2%) 550 0.54148 1 0.0098558 1 0.2018 1 0.091428 1 0.29641 1 0.081101 1 14q gain 22 (4%) 538 0.26368 1 0.14541 1 0.51283 1 0.44007 1 0.05321 1 0.64467 1 15q gain 24 (4%) 536 0.50393 1 0.98471 1 0.5266 1 0.090807 1 0.45088 1 0.17683 1 16p gain 38 (7%) 522 0.030925 1 0.65049 1 0.30564 1 0.74557 1 1 1 0.072572 1 16q gain 37 (7%) 523 0.11727 1 0.58956 1 0.60615 1 0.97205 1 1 1 0.099933 1 17p gain 47 (8%) 513 0.31114 1 0.089877 1 0.21158 1 0.59423 1 0.27509 1 0.32864 1 17q gain 58 (10%) 502 0.056995 1 0.032307 1 0.47938 1 0.64827 1 0.49882 1 0.29933 1 18p gain 57 (10%) 503 0.77858 1 0.79667 1 0.66924 1 0.25969 1 0.17395 1 0.88079 1 18q gain 57 (10%) 503 0.93032 1 0.50885 1 0.19968 1 0.24181 1 0.17395 1 0.6527 1 19p gain 218 (39%) 342 0.30302 1 0.6676 1 0.85921 1 0.83523 1 0.33604 1 0.71006 1 19q gain 193 (34%) 367 0.31923 1 0.21503 1 0.7162 1 0.91479 1 0.92209 1 0.63369 1 20p gain 216 (39%) 344 0.56672 1 4.2975e-05 0.0204 0.28705 1 0.48122 1 0.49579 1 0.51516 1 20q gain 214 (38%) 346 0.83589 1 0.00020107 0.0945 0.24708 1 0.61603 1 0.47591 1 0.51338 1 21q gain 62 (11%) 498 0.48837 1 0.04588 1 1 1 0.11003 1 0.050288 1 1 1 22q gain 34 (6%) 526 0.43295 1 0.70153 1 1 1 0.41319 1 0.60149 1 1 1 xq gain 16 (3%) 544 0.92317 1 0.31563 1 1 1 0.50001 1 0.26374 1 0.16979 1 1p loss 15 (3%) 545 0.27688 1 0.029932 1 0.42448 1 0.86253 1 0.62499 1 0.57511 1 1q loss 14 (2%) 546 0.52545 1 0.0034919 1 1 1 0.19454 1 1 1 0.3901 1 2p loss 32 (6%) 528 0.74476 1 0.18574 1 0.13466 1 0.85582 1 1 1 0.16993 1 2q loss 32 (6%) 528 0.92019 1 0.3663 1 0.26297 1 0.59082 1 0.31233 1 0.07707 1 3p loss 40 (7%) 520 0.28399 1 0.036748 1 1 1 0.85972 1 0.28678 1 0.11347 1 3q loss 34 (6%) 526 0.7549 1 0.41054 1 0.58903 1 0.81999 1 0.41655 1 0.57194 1 4p loss 53 (9%) 507 0.62392 1 0.59637 1 0.1838 1 0.40807 1 0.52678 1 0.64339 1 4q loss 53 (9%) 507 0.16681 1 0.12248 1 0.65871 1 0.37386 1 1 1 0.64339 1 5p loss 42 (8%) 518 0.053768 1 0.3325 1 1 1 0.75706 1 0.77229 1 0.037289 1 5q loss 43 (8%) 517 0.10371 1 0.30318 1 1 1 0.97366 1 0.32502 1 0.12669 1 6p loss 86 (15%) 474 0.0082628 1 0.42951 1 0.81069 1 0.51121 1 0.57087 1 0.52988 1 6q loss 123 (22%) 437 0.30418 1 0.7303 1 0.34779 1 0.48911 1 0.76359 1 1 1 7p loss 8 (1%) 552 0.35144 1 0.15145 1 1 1 0.6465 1 1 1 0.44603 1 7q loss 6 (1%) 554 0.52336 1 0.098796 1 1 1 0.22725 1 1 1 0.67006 1 8p loss 58 (10%) 502 0.7397 1 0.19961 1 0.15616 1 0.74422 1 0.91058 1 0.55213 1 8q loss 42 (8%) 518 0.28974 1 0.079425 1 0.41622 1 0.45173 1 1 1 1 1 9p loss 195 (35%) 365 0.53489 1 0.5579 1 0.7165 1 0.89457 1 0.54602 1 0.77515 1 9q loss 90 (16%) 470 0.41505 1 0.40246 1 0.29027 1 0.46136 1 0.094929 1 1 1 10p loss 466 (83%) 94 2.1435e-05 0.0102 8.5845e-08 4.11e-05 0.2488 1 0.096931 1 0.0027457 1 0.71623 1 10q loss 478 (85%) 82 6.5966e-05 0.0312 5.0978e-07 0.000244 0.54105 1 0.0022488 1 0.011822 1 0.61011 1 11p loss 97 (17%) 463 0.18347 1 0.65141 1 0.086052 1 0.37584 1 0.37844 1 0.63207 1 11q loss 92 (16%) 468 0.90559 1 0.45461 1 0.41391 1 0.74548 1 1 1 0.27057 1 12p loss 59 (11%) 501 0.96027 1 0.64571 1 0.40069 1 0.90728 1 1 1 0.65963 1 12q loss 58 (10%) 502 0.99982 1 0.61792 1 0.47938 1 0.7527 1 0.65461 1 0.88213 1 13q loss 181 (32%) 379 0.90281 1 0.68053 1 0.92632 1 0.75006 1 0.55247 1 0.62912 1 14q loss 145 (26%) 415 0.91927 1 0.75444 1 0.43112 1 0.66602 1 0.71606 1 0.83678 1 15q loss 101 (18%) 459 0.6108 1 0.10282 1 0.49986 1 0.49022 1 0.68706 1 0.076257 1 16p loss 63 (11%) 497 0.065365 1 0.40013 1 0.68269 1 0.94499 1 0.32396 1 0.060975 1 16q loss 82 (15%) 478 0.023905 1 0.83664 1 1 1 0.58574 1 0.643 1 0.028602 1 17p loss 61 (11%) 499 0.76151 1 0.49241 1 0.26955 1 0.82486 1 0.74909 1 0.19124 1 17q loss 40 (7%) 520 0.99432 1 0.46294 1 0.50237 1 0.46761 1 1 1 0.033924 1 18p loss 68 (12%) 492 0.18508 1 0.73081 1 0.50984 1 0.46513 1 0.77074 1 1 1 18q loss 60 (11%) 500 0.41096 1 0.78318 1 0.77986 1 0.18402 1 0.74608 1 0.2449 1 19p loss 25 (4%) 535 0.43963 1 0.511 1 0.67725 1 0.84061 1 0.63556 1 1 1 19q loss 33 (6%) 527 0.52273 1 0.48481 1 0.71627 1 0.55757 1 0.18799 1 0.84855 1 20p loss 18 (3%) 542 0.84559 1 0.26778 1 0.21869 1 0.74713 1 1 1 1 1 20q loss 16 (3%) 544 0.75464 1 0.64497 1 0.19564 1 0.87334 1 1 1 0.596 1 21q loss 40 (7%) 520 0.98935 1 0.62673 1 0.50237 1 0.19396 1 0.8616 1 0.48112 1 22q loss 178 (32%) 382 0.4429 1 0.20223 1 1 1 0.49286 1 0.34373 1 0.69676 1 xq loss 104 (19%) 456 0.26208 1 0.39146 1 0.5055 1 0.30635 1 0.83518 1 0.72641 1