Clinical Features	MRNA_CNMF		MRNA_CHIERARCHICAL		CN_CNMF		METHLYATION_CNMF		RPPA_CNMF		RPPA_CHIERARCHICAL		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL		MIRSEQ_MATURE_CNMF		MIRSEQ_MATURE_CHIERARCHICAL	
	nMutated (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q
BAP1	42 (10%)	375	0.031783	1	0.028123	1	0.086835	1	0.00013259	0.0115	0.0012083	0.103	0.13374	1	1.2944e-05	0.00115	2.7144e-08	2.55e-06	8.7852e-06	0.000799	4.0005e-06	0.000368	0.16266	1	0.071935	1
VHL	218 (52%)	199	0.016285	1	0.018804	1	0.057415	1	0.80583	1	0.3418	1	0.64246	1	0.0022983	0.191	0.010268	0.811	0.04393	1	0.27382	1	0.11694	1	0.33718	1
SETD2	48 (12%)	369	0.76407	1	0.78654	1	0.6403	1	3.4275e-07	3.19e-05	0.32904	1	0.3494	1	0.71736	1	0.79804	1	0.68293	1	0.45883	1	1	1	0.54965	1
PBRM1	137 (33%)	280	0.13478	1	0.21236	1	0.011144	0.858	9.3407e-06	0.000841	0.00076164	0.0655	0.74951	1	0.0046534	0.372	0.022146	1	0.003107	0.252	0.0026516	0.217	2.38e-05	0.00209	0.032296	1
KDM5C	27 (6%)	390	NA	NA	NA	NA	0.44712	1	0.17165	1	0.47686	1	0.58138	1	0.14973	1	0.78315	1	0.01137	0.864	0.72432	1	0.33158	1	0.4663	1
PTEN	18 (4%)	399	0.1063	1	0.090327	1	0.12485	1	0.15412	1	0.21435	1	0.055158	1	0.0012591	0.106	0.04539	1	0.042493	1	0.12884	1	0.012776	0.958	0.45885	1
TSPAN19	5 (1%)	412	NA	NA	NA	NA	0.45076	1	NA	NA	0.080734	1	0.20279	1	0.72358	1	0.52392	1	0.45152	1	0.28919	1	NA	NA	NA	NA
TCEB1	3 (1%)	414	NA	NA	NA	NA	0.010973	0.856	NA	NA	0.34233	1	0.79696	1	0.041925	1	0.099033	1	0.16367	1	0.63167	1	NA	NA	NA	NA
NEFH	6 (1%)	411	NA	NA	NA	NA	0.67241	1	0.37119	1	0.96301	1	0.20016	1	0.10766	1	0.21863	1	0.4324	1	0.2597	1	0.54377	1	0.94996	1