Clinical Features Time to Death AGE NEOPLASM.DISEASESTAGE PATHOLOGY.T.STAGE PATHOLOGY.N.STAGE PATHOLOGY.M.STAGE GENDER KARNOFSKY.PERFORMANCE.SCORE NUMBERPACKYEARSSMOKED YEAROFTOBACCOSMOKINGONSET nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q t-test_P t-test_Q t-test_P t-test_Q 1p gain 4 (2%) 159 7.9828e-06 0.0042 0.44431 1 0.021193 1 0.012916 1 0.080296 1 0.17962 1 0.081581 1 NA NA NA NA NA NA 1q gain 13 (8%) 150 3.5245e-05 0.018 0.66578 1 1.2851e-05 0.00671 3.2649e-05 0.0168 0.40795 1 0.13281 1 0.062925 1 0.47841 1 NA NA NA NA 2p gain 31 (19%) 132 0.259 1 0.34029 1 0.098707 1 0.7595 1 0.66927 1 0.0032759 1 0.51573 1 0.53353 1 0.33069 1 0.47667 1 2q gain 33 (20%) 130 0.39153 1 0.69482 1 0.02418 1 0.79885 1 0.22345 1 0.004794 1 0.39964 1 0.5308 1 0.33069 1 0.47667 1 3p gain 46 (28%) 117 0.41519 1 0.76278 1 0.050785 1 0.032566 1 1 1 0.38075 1 0.85035 1 0.041562 1 0.36769 1 NA NA 3q gain 55 (34%) 108 0.16976 1 0.46359 1 0.16092 1 0.088532 1 1 1 0.16859 1 0.71814 1 0.11321 1 0.35739 1 NA NA 4p gain 6 (4%) 157 0.020172 1 0.0048426 1 0.043299 1 0.54228 1 0.50147 1 0.1803 1 0.66936 1 NA NA NA NA NA NA 4q gain 5 (3%) 158 0.33283 1 0.015477 1 0.25868 1 0.61232 1 0.16688 1 0.69003 1 1 1 NA NA NA NA NA NA 5p gain 24 (15%) 139 0.67854 1 0.89256 1 0.20153 1 0.13742 1 0.55837 1 0.38546 1 0.63682 1 0.40065 1 NA NA NA NA 5q gain 24 (15%) 139 0.67854 1 0.42182 1 0.20153 1 0.32703 1 1 1 0.38546 1 0.63682 1 0.40065 1 NA NA NA NA 6p gain 7 (4%) 156 0.0014301 0.691 0.57698 1 0.0077515 1 0.004499 1 0.27713 1 0.025732 1 1 1 0.54814 1 NA NA NA NA 6q gain 5 (3%) 158 1.5328e-09 8.19e-07 0.16599 1 0.028456 1 0.044066 1 0.080296 1 0.012708 1 0.63722 1 0.54814 1 NA NA NA NA 7p gain 95 (58%) 68 0.060734 1 0.46611 1 0.0004671 0.23 0.0068 1 0.66171 1 0.22305 1 0.1227 1 0.15863 1 0.35398 1 0.83651 1 7q gain 96 (59%) 67 0.054635 1 0.4023 1 0.00027567 0.137 0.0055439 1 0.53999 1 0.31389 1 0.11808 1 0.15863 1 0.35398 1 0.83651 1 8p gain 11 (7%) 152 0.0035339 1 0.96922 1 0.16476 1 0.084515 1 0.29566 1 0.84778 1 0.30848 1 NA NA NA NA NA NA 8q gain 15 (9%) 148 1.5596e-06 0.000828 0.78903 1 0.0056795 1 0.0018457 0.888 0.044377 1 0.34852 1 0.071485 1 0.56572 1 NA NA NA NA 9p gain 3 (2%) 160 0.10677 1 0.93081 1 0.055676 1 0.070371 1 NA NA 0.62652 1 1 1 NA NA NA NA NA NA 10p gain 5 (3%) 158 0.46512 1 0.92666 1 0.16198 1 0.37741 1 NA NA 0.32132 1 1 1 NA NA NA NA NA NA 10q gain 5 (3%) 158 0.46512 1 0.92666 1 0.16198 1 0.37741 1 NA NA 0.32132 1 1 1 NA NA NA NA NA NA 11p gain 8 (5%) 155 0.052391 1 0.63771 1 0.036309 1 0.040389 1 0.58812 1 0.019143 1 0.69786 1 NA NA NA NA NA NA 11q gain 7 (4%) 156 0.46635 1 0.44935 1 0.18614 1 0.062542 1 0.73762 1 0.1635 1 0.19924 1 NA NA NA NA NA NA 12p gain 66 (40%) 97 0.80363 1 0.68075 1 0.31875 1 0.60067 1 0.81832 1 0.12623 1 0.023268 1 0.84708 1 0.29002 1 NA NA 12q gain 66 (40%) 97 0.80363 1 0.68075 1 0.31875 1 0.60067 1 0.81832 1 0.12623 1 0.023268 1 0.84708 1 0.29002 1 NA NA 13q gain 18 (11%) 145 0.90634 1 0.76166 1 0.60141 1 0.80413 1 0.73762 1 1 1 0.78758 1 0.15251 1 NA NA NA NA 14q gain 3 (2%) 160 NA NA NA NA 0.068952 1 0.028096 1 NA NA 0.62652 1 0.21521 1 NA NA NA NA NA NA 15q gain 4 (2%) 159 0.47815 1 0.58817 1 0.48612 1 0.41158 1 NA NA 0.69003 1 0.58427 1 NA NA NA NA NA NA 16p gain 86 (53%) 77 0.78471 1 0.15785 1 0.79244 1 0.94342 1 1 1 0.32316 1 0.010008 1 0.67413 1 0.36914 1 NA NA 16q gain 83 (51%) 80 0.22746 1 0.3528 1 0.54524 1 0.51303 1 0.74156 1 0.081023 1 0.059652 1 0.20702 1 0.36914 1 NA NA 17p gain 99 (61%) 64 0.056894 1 0.05605 1 1.5943e-05 0.00826 0.0005889 0.289 0.21501 1 1.0734e-05 0.00561 0.054607 1 0.25449 1 0.36914 1 NA NA 17q gain 112 (69%) 51 0.48095 1 0.12357 1 0.043082 1 0.14416 1 0.44337 1 0.00050376 0.247 0.19944 1 0.66693 1 NA NA NA NA 18p gain 8 (5%) 155 0.88802 1 0.90284 1 0.29397 1 0.54494 1 NA NA 0.14899 1 1 1 0.54814 1 NA NA NA NA 18q gain 5 (3%) 158 0.3552 1 0.96244 1 0.59037 1 0.61232 1 NA NA 0.41902 1 1 1 NA NA NA NA NA NA 19p gain 3 (2%) 160 0.62648 1 0.34361 1 0.48124 1 0.43781 1 1 1 0.62652 1 1 1 NA NA NA NA NA NA 19q gain 3 (2%) 160 0.62648 1 0.34361 1 0.48124 1 0.43781 1 1 1 0.62652 1 1 1 NA NA NA NA NA NA 20p gain 55 (34%) 108 0.6354 1 0.14767 1 0.50984 1 0.47558 1 0.78659 1 0.86654 1 0.59355 1 0.64091 1 NA NA NA NA 20q gain 57 (35%) 106 0.37954 1 0.11621 1 0.22444 1 0.27146 1 0.51245 1 1 1 0.59145 1 0.64091 1 NA NA NA NA 21q gain 9 (6%) 154 0.010982 1 0.064721 1 1 1 1 1 NA NA 0.19239 1 1 1 0.90479 1 NA NA NA NA xq gain 51 (31%) 112 0.57705 1 0.73797 1 0.0028511 1 0.0067645 1 0.60799 1 0.3366 1 0.065031 1 0.2675 1 0.37266 1 NA NA 1p loss 20 (12%) 143 0.037897 1 0.81477 1 0.062574 1 0.12389 1 0.29566 1 0.91461 1 0.30756 1 0.13038 1 NA NA NA NA 1q loss 11 (7%) 152 0.50604 1 0.33332 1 0.26765 1 0.57686 1 0.65365 1 0.46714 1 0.73521 1 0.31364 1 NA NA NA NA 3p loss 14 (9%) 149 0.010262 1 0.17748 1 1.7983e-05 0.0093 0.0001856 0.0926 0.66927 1 0.11015 1 0.76111 1 0.79159 1 0.45338 1 NA NA 3q loss 4 (2%) 159 3.9589e-11 2.12e-08 0.21036 1 0.0051139 1 0.012916 1 0.19236 1 0.17962 1 0.58427 1 NA NA NA NA NA NA 4p loss 15 (9%) 148 0.00035798 0.177 0.0086692 1 5.5848e-05 0.0283 1.576e-05 0.00818 0.0089774 1 0.53577 1 3.9953e-05 0.0204 0.79159 1 NA NA NA NA 4q loss 16 (10%) 147 0.011202 1 0.053537 1 0.00043187 0.213 0.0001459 0.073 0.069817 1 0.16541 1 0.00089438 0.435 0.75395 1 NA NA NA NA 5p loss 7 (4%) 156 1.9124e-10 1.02e-07 0.091121 1 0.016071 1 0.004499 1 0.039576 1 0.1635 1 0.026229 1 NA NA NA NA NA NA 5q loss 7 (4%) 156 8.6109e-08 4.58e-05 0.03506 1 0.0272 1 0.004499 1 0.01521 1 0.1635 1 0.026229 1 NA NA NA NA NA NA 6p loss 11 (7%) 152 0.012143 1 0.42777 1 0.02745 1 0.029508 1 0.058248 1 0.83298 1 0.088586 1 0.1574 1 NA NA NA NA 6q loss 15 (9%) 148 0.20575 1 0.9201 1 0.036132 1 0.0024999 1 0.16883 1 0.34651 1 0.01499 1 0.75395 1 NA NA NA NA 8p loss 6 (4%) 157 0.0019872 0.95 0.53384 1 0.050545 1 0.54228 1 0.080296 1 0.025732 1 0.36628 1 NA NA NA NA NA NA 8q loss 4 (2%) 159 0.031661 1 0.29986 1 0.079063 1 0.41158 1 NA NA 0.17962 1 0.58427 1 NA NA NA NA NA NA 9p loss 21 (13%) 142 0.0095246 1 0.56096 1 1.4278e-05 0.00744 8.1278e-05 0.0409 0.11854 1 0.034002 1 0.0088575 1 0.31383 1 NA NA NA NA 9q loss 23 (14%) 140 0.001789 0.862 0.58675 1 5.931e-05 0.03 1.4944e-05 0.00777 0.060697 1 0.23977 1 0.024811 1 0.32479 1 NA NA NA NA 10p loss 11 (7%) 152 0.208 1 0.87035 1 0.0063249 1 0.010869 1 0.055616 1 0.08718 1 0.30848 1 0.43995 1 NA NA NA NA 10q loss 11 (7%) 152 0.15027 1 0.44175 1 0.0023098 1 0.0053515 1 0.02478 1 0.16819 1 0.30848 1 0.35454 1 NA NA NA NA 11p loss 10 (6%) 153 0.00077453 0.378 0.10535 1 0.025558 1 0.054127 1 0.19236 1 0.46714 1 0.16894 1 NA NA NA NA NA NA 11q loss 14 (9%) 149 2.4803e-05 0.0128 0.33105 1 0.00012854 0.0644 5.2152e-05 0.0266 0.064091 1 0.082392 1 0.35996 1 0.79159 1 NA NA NA NA 13q loss 16 (10%) 147 1.0469e-05 0.00549 0.040371 1 0.0028481 1 0.00069595 0.34 0.044377 1 0.48911 1 0.0001232 0.0618 0.46721 1 NA NA NA NA 14q loss 31 (19%) 132 0.012843 1 0.99132 1 0.0019842 0.95 0.0051384 1 0.077639 1 0.10846 1 0.051072 1 0.44785 1 NA NA NA NA 15q loss 18 (11%) 145 2.6514e-08 1.41e-05 0.11946 1 0.0073229 1 0.0047754 1 0.11214 1 0.12523 1 0.17796 1 0.66606 1 NA NA NA NA 16p loss 4 (2%) 159 3.3538e-05 0.0172 0.64752 1 0.13027 1 0.11478 1 NA NA 1 1 0.081581 1 NA NA NA NA NA NA 16q loss 5 (3%) 158 3.3538e-05 0.0172 0.31572 1 0.074819 1 0.20535 1 0.27345 1 1 1 0.16058 1 NA NA NA NA NA NA 17p loss 8 (5%) 155 4.0301e-14 2.16e-11 0.7527 1 0.00030637 0.152 0.0069059 1 0.0080714 1 0.049864 1 0.053838 1 0.47841 1 NA NA NA NA 18p loss 26 (16%) 137 5.2112e-05 0.0266 0.17951 1 7.2018e-05 0.0363 5.1114e-06 0.0027 0.060697 1 0.077413 1 0.062955 1 0.724 1 NA NA NA NA 18q loss 28 (17%) 135 5.2112e-05 0.0266 0.2803 1 8.4549e-06 0.00444 5.8781e-06 0.0031 0.029048 1 0.093755 1 0.04416 1 0.724 1 NA NA NA NA 19p loss 12 (7%) 151 0.7443 1 0.17134 1 0.038079 1 0.036707 1 0.19236 1 0.26305 1 0.34838 1 0.75395 1 0.31496 1 NA NA 19q loss 11 (7%) 152 0.00088905 0.433 0.94758 1 0.0013501 0.655 0.0019682 0.945 0.19236 1 0.13351 1 0.088586 1 0.75395 1 NA NA NA NA 21q loss 31 (19%) 132 0.57744 1 0.66133 1 0.013922 1 0.0074693 1 0.87195 1 0.1434 1 0.12908 1 0.71098 1 0.33237 1 NA NA 22q loss 39 (24%) 124 0.039287 1 0.39519 1 2.0189e-06 0.00107 3.322e-06 0.00176 0.061929 1 0.18505 1 0.0013831 0.669 0.44685 1 NA NA NA NA xq loss 20 (12%) 143 6.6657e-05 0.0337 0.17415 1 0.00049463 0.243 0.00019381 0.0965 0.052628 1 0.21276 1 0.016902 1 0.46893 1 NA NA NA NA