		Clinical Features	CN_CNMF		METHLYATION_CNMF		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL	
	nCNV (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
amp_1p33	7 (4%)	184	0.00067067	0.0693	0.0051592	0.445	0.12442	1	0.6648	1	0.0098865	0.741	0.23022	1
amp_1q43	7 (4%)	184	0.0046975	0.413	0.0051592	0.445	0.37343	1	0.42513	1	0.13739	1	0.12057	1
amp_11q23.3	17 (9%)	174	8.5747e-21	1.05e-18	8.507e-05	0.00944	0.3581	1	0.78378	1	0.74626	1	0.91472	1
amp_13q31.3	7 (4%)	184	0.084911	1	0.0051592	0.445	0.066765	1	0.096536	1	0.73534	1	0.14258	1
amp_19p13.2	6 (3%)	185	0.00013679	0.0149	0.58068	1	0.85745	1	0.66376	1	0.89468	1	0.86286	1
amp_20q11.21	3 (2%)	188	0.0076728	0.621	0.18478	1	NA	NA	0.5502	1	NA	NA	NA	NA
amp_21q22.2	14 (7%)	177	5.1452e-13	6.17e-11	0.0015608	0.153	0.0033604	0.299	0.337	1	0.0017725	0.167	0.017331	1
del_3p13	9 (5%)	182	0.00015049	0.0163	0.13708	1	0.034901	1	0.71843	1	0.012027	0.878	0.0016557	0.161
del_3q26.31	3 (2%)	188	0.0076728	0.621	0.18478	1	0.78607	1	1	1	0.061789	1	0.04811	1
del_5q31.2	18 (9%)	173	1.7702e-13	2.14e-11	6.1088e-05	0.0069	0.0051197	0.445	0.092271	1	0.00086477	0.0882	0.0004784	0.0502
del_7p12.1	16 (8%)	175	0.00040016	0.0424	0.00066655	0.0693	0.0017154	0.163	0.0027164	0.247	0.0059765	0.496	0.0016713	0.161
del_7q32.3	23 (12%)	168	2.3843e-07	2.84e-05	0.00018948	0.0203	0.037428	1	0.021985	1	0.0029475	0.265	9.2361e-05	0.0102
del_7q34	24 (13%)	167	6.2596e-07	7.39e-05	7.4042e-05	0.00829	0.021171	1	0.021247	1	0.001047	0.106	2.3115e-05	0.00264
del_9q21.32	5 (3%)	186	0.25569	1	0.41572	1	0.17604	1	0.66376	1	0.18263	1	0.10759	1
del_12p13.2	10 (5%)	181	2.1152e-05	0.00243	0.007759	0.621	0.19716	1	0.16676	1	0.068249	1	0.021665	1
del_12q21.33	3 (2%)	188	0.0019726	0.181	0.38025	1	0.18603	1	0.55157	1	0.0082666	0.645	0.0069633	0.571
del_16q23.1	9 (5%)	182	0.0018211	0.169	0.064782	1	0.33199	1	1	1	0.044236	1	0.049262	1
del_17p13.2	15 (8%)	176	1.3982e-14	1.71e-12	0.0010543	0.106	0.010573	0.782	0.021068	1	0.08704	1	0.0014111	0.14
del_17q11.2	13 (7%)	178	1.3288e-06	0.000155	0.028967	1	0.15118	1	0.22244	1	0.13635	1	0.0092386	0.702
del_18p11.21	9 (5%)	182	3.4596e-06	0.000401	0.0083162	0.645	0.38067	1	0.71843	1	0.21278	1	0.091424	1
del_20q13.13	4 (2%)	187	0.025917	1	0.080833	1	0.78607	1	1	1	0.12454	1	0.22204	1
