Clinical Features	CN_CNMF		METHLYATION_CNMF		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL		MIRSEQ_MATURE_CNMF		MIRSEQ_MATURE_CHIERARCHICAL	
	nCNV (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
amp_12p11.21	10 (27%)	27	0.0094843	1	0.45974	1	1	1	0.22773	1	0.66522	1	1	1
amp_17q24.3	12 (32%)	25	0.076805	1	1	1	1	1	0.45167	1	0.66522	1	0.40652	1
amp_19q13.43	4 (11%)	33	0.29624	1	1	1	1	1	0.39769	1	1	1	1	1
amp_20p12.1	4 (11%)	33	0.61844	1	1	1	1	1	NA	NA	1	1	1	1
del_1p36.23	17 (46%)	20	0.0029797	0.39	1	1	0.68817	1	0.11153	1	0.6951	1	0.42831	1
del_1p22.1	17 (46%)	20	0.10381	1	0.09937	1	1	1	0.035713	1	1	1	0.69217	1
del_2q35	8 (22%)	29	0.055384	1	0.42826	1	1	1	0.80134	1	0.59826	1	0.11338	1
del_3p21.1	21 (57%)	16	0.51948	1	0.74631	1	0.00072274	0.0976	0.0082351	1	0.001723	0.229	0.0052211	0.674
del_4q26	18 (49%)	19	0.0081381	1	0.10314	1	1	1	0.11357	1	1	1	0.68906	1
del_5q23.2	7 (19%)	30	0.20217	1	0.41646	1	1	1	0.50764	1	1	1	1	1
del_6q22.31	20 (54%)	17	0.50847	1	0.51738	1	1	1	0.87945	1	1	1	0.69217	1
del_9p21.3	23 (62%)	14	2.0985e-05	0.00285	1	1	1	1	0.35068	1	1	1	0.68284	1
del_10p15.1	13 (35%)	24	0.035736	1	0.51189	1	1	1	0.52282	1	0.69217	1	0.42586	1
del_10q22.3	7 (19%)	30	0.43728	1	0.68	1	1	1	0.6044	1	0.36522	1	0.34783	1
del_10q24.1	13 (35%)	24	0.48911	1	0.7307	1	0.22797	1	0.14627	1	0.044737	1	0.014938	1
del_13q13.3	21 (57%)	16	0.017812	1	0.50847	1	1	1	0.51206	1	1	1	0.68906	1
del_14q11.2	16 (43%)	21	0.0089618	1	0.74631	1	0.10537	1	0.23508	1	0.43124	1	0.23286	1
del_14q32.31	19 (51%)	18	0.0025498	0.337	1	1	0.10537	1	0.23508	1	0.43124	1	0.23286	1
del_15q15.1	14 (38%)	23	0.001568	0.21	1	1	1	1	1	1	1	1	0.68906	1
del_16p13.3	3 (8%)	34	1	1	0.087516	1	1	1	NA	NA	1	1	1	1
del_16q21	9 (24%)	28	0.023939	1	1	1	0.66449	1	1	1	0.40092	1	0.21831	1
del_16q24.1	11 (30%)	26	0.0034242	0.445	0.49505	1	1	1	0.63457	1	1	1	0.68284	1
del_22q12.2	29 (78%)	8	0.10357	1	0.10901	1	0.053208	1	0.15124	1	0.017057	1	0.023746	1