Clinical Features Time to Death AGE PATHOLOGY.T.STAGE PATHOLOGY.N.STAGE COMPLETENESS.OF.RESECTION NUMBER.OF.LYMPH.NODES GLEASON_SCORE_COMBINED GLEASON_SCORE_PRIMARY GLEASON_SCORE_SECONDARY GLEASON_SCORE PSA_RESULT_PREOP DAYS_TO_PREOP_PSA PSA_VALUE DAYS_TO_PSA nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q t-test_P t-test_Q t-test_P t-test_Q t-test_P t-test_Q t-test_P t-test_Q t-test_P t-test_Q t-test_P t-test_Q t-test_P t-test_Q t-test_P t-test_Q amp_1q21.3 13 (6%) 192 100 1 0.51061 1 0.15794 1 0.33676 1 0.61203 1 0.53089 1 0.023483 1 0.022608 1 0.30771 1 0.034693 1 0.18576 1 0.55424 1 0.59062 1 0.92076 1 amp_3q22.1 25 (12%) 180 100 1 0.03144 1 0.0033031 1 0.70491 1 0.099973 1 0.46605 1 0.10073 1 0.008344 1 0.71017 1 0.006306 1 0.05728 1 0.21904 1 0.016786 1 0.17964 1 amp_3q26.2 33 (16%) 172 100 1 0.068202 1 0.024098 1 0.50272 1 1 1 0.31463 1 0.16811 1 0.02365 1 0.68301 1 0.02635 1 0.044087 1 0.65831 1 0.61707 1 0.99125 1 amp_4p16.3 10 (5%) 195 100 1 0.39631 1 0.027941 1 1 1 0.12593 1 0.48659 1 0.024805 1 0.031896 1 0.17646 1 0.023541 1 0.62151 1 0.3058 1 0.05907 1 0.67614 1 amp_4q13.3 4 (2%) 201 100 1 0.078775 1 0.095625 1 0.34306 1 0.26076 1 0.78592 1 0.13901 1 0.27282 1 0.080509 1 0.1499 1 0.29199 1 0.49902 1 0.79038 1 0.69616 1 amp_5q35.3 7 (3%) 198 100 1 0.0011144 0.811 0.014504 1 0.52396 1 0.69124 1 0.82418 1 0.28941 1 0.21396 1 0.80254 1 0.053135 1 0.67324 1 0.49534 1 0.00032689 0.245 0.62049 1 amp_7p15.3 39 (19%) 166 100 1 0.31509 1 0.015029 1 0.31997 1 0.026393 1 0.25985 1 0.02777 1 0.049947 1 0.22951 1 0.023902 1 0.024385 1 0.36532 1 0.45938 1 0.16499 1 amp_8p11.23 18 (9%) 187 100 1 0.13242 1 0.28778 1 0.17211 1 0.70472 1 0.3475 1 0.012534 1 0.010448 1 0.23011 1 0.010439 1 0.046883 1 0.45392 1 0.13683 1 0.19043 1 amp_8q24.21 51 (25%) 154 100 1 0.13558 1 0.019368 1 0.081781 1 0.93524 1 0.25129 1 1.9801e-05 0.0151 6.9748e-06 0.00534 0.12199 1 6.6726e-05 0.0509 0.03863 1 0.41646 1 0.35663 1 0.65081 1 amp_9q34.3 20 (10%) 185 100 1 0.32086 1 0.0084621 1 0.00042921 0.32 0.72864 1 0.055655 1 0.00043312 0.323 0.00015803 0.12 0.091456 1 0.00043929 0.327 0.06493 1 0.24067 1 0.18055 1 0.86103 1 amp_11q13.3 11 (5%) 194 100 1 0.29571 1 0.015438 1 0.062496 1 1 1 0.29328 1 0.047576 1 0.0018328 1 0.85457 1 0.032524 1 0.37163 1 0.10113 1 0.073678 1 0.76782 1 amp_12q24.32 7 (3%) 198 100 1 0.94303 1 0.15753 1 0.14376 1 0.28863 1 0.37573 1 0.086782 1 0.024446 1 0.74601 1 0.032411 1 0.2717 1 0.12567 1 0.97738 1 0.19974 1 amp_14q21.1 10 (5%) 195 100 1 0.00039339 0.294 0.25573 1 0.573 1 1 1 0.70001 1 0.042379 1 0.19321 1 0.28959 1 0.004963 1 0.44874 1 0.69227 1 0.85089 1 0.11499 1 amp_15q11.2 6 (3%) 199 100 1 0.24076 1 0.50093 1 1 1 0.65974 1 0.00079422 0.583 0.70568 1 0.37127 1 0.27166 1 0.54544 1 0.0094199 1 0.54945 1 0.000568 0.421 0.3544 1 amp_19q13.43 5 (2%) 200 100 1 0.27335 1 0.01893 1 1 1 1 1 0.00079422 0.583 0.1543 1 0.16062 1 0.306 1 0.045056 1 0.3131 1 0.75759 1 0.63677 1 0.32037 1 amp_20q13.31 11 (5%) 194 100 1 0.013882 1 0.00019159 0.146 0.60428 1 0.42932 1 0.00078948 0.582 0.065601 1 9.526e-06 0.00729 0.87103 1 0.03161 1 0.19366 1 0.89486 1 0.66006 1 0.17672 1 amp_xp22.11 8 (4%) 197 100 1 0.96152 1 0.41971 1 0.573 1 1 1 0.77075 1 0.34188 1 0.27556 1 0.90183 1 0.43358 1 0.39274 1 0.72503 1 0.00022001 0.166 0.00025308 0.191 amp_xp22.11 8 (4%) 197 100 1 0.30839 1 0.41971 1 0.573 1 1 1 0.77075 1 0.34188 1 0.1025 1 0.44406 1 0.77876 1 0.28947 1 0.43733 1 0.00021424 0.162 0.067859 1 amp_xp21.1 7 (3%) 198 100 1 0.2232 1 0.26706 1 0.52396 1 1 1 0.82418 1 0.52888 1 0.40141 1 0.76722 1 0.35948 1 0.45339 1 0.71654 1 0.00026746 0.201 0.17165 1 amp_xq21.1 7 (3%) 198 100 1 0.66904 1 0.54195 1 0.52396 1 0.4581 1 0.70763 1 0.52888 1 0.60553 1 0.74601 1 0.45265 1 0.98674 1 0.37319 1 0.00020377 0.154 0.6585 1 amp_xq21.1 5 (2%) 200 100 1 0.30694 1 0.44894 1 0.077152 1 0.63598 1 0.33314 1 0.40375 1 0.60146 1 0.50099 1 0.46457 1 0.4082 1 0.17795 1 0.00028314 0.213 0.43593 1 amp_xq21.31 5 (2%) 200 100 1 0.21862 1 1 1 1 1 0.63598 1 0.00079422 0.583 0.30308 1 4.3462e-30 3.34e-27 0.95424 1 0.61781 1 0.46106 1 0.35912 1 0.54498 1 0.78185 1 amp_xq25 3 (1%) 202 100 1 1.6206e-08 1.24e-05 1 1 1 1 1 1 0.00079573 0.583 0.5783 1 0.6 1 0.72626 1 0.61865 1 0.70765 1 0.43737 1 NA NA NA NA amp_xq25 6 (3%) 199 100 1 0.76974 1 0.73144 1 0.46964 1 0.65974 1 0.95555 1 0.34113 1 0.8744 1 0.24371 1 0.54544 1 0.8428 1 0.53254 1 0.00020486 0.155 0.5214 1 amp_xq27.1 9 (4%) 196 100 1 0.27882 1 1 1 1 1 1 1 0.00079189 0.583 0.95778 1 0.60635 1 0.66104 1 0.78833 1 0.079302 1 0.1282 1 0.00068705 0.508 0.15707 1 del_1p31.3 27 (13%) 178 100 1 0.55399 1 0.11549 1 0.7105 1 0.10085 1 0.80049 1 0.010584 1 0.097638 1 0.027242 1 0.021037 1 0.62756 1 0.62711 1 0.76613 1 0.2107 1 del_1q23.1 9 (4%) 196 100 1 0.70575 1 1 1 1 1 1 1 0.00079189 0.583 0.53762 1 0.24689 1 0.9797 1 0.87975 1 0.21799 1 0.072069 1 0.073182 1 0.00030331 0.227 del_1q42.2 16 (8%) 189 100 1 0.21458 1 0.30024 1 0.19876 1 0.28019 1 0.47443 1 0.60374 1 0.28906 1 0.48873 1 0.16949 1 0.36372 1 0.62674 1 0.4431 1 0.83289 1 del_2p22.1 12 (6%) 193 100 1 0.99679 1 0.13361 1 0.019993 1 0.55661 1 0.21571 1 0.030354 1 0.040353 1 0.11202 1 0.040373 1 0.93574 1 0.53197 1 0.61831 1 0.19119 1 del_2q22.1 27 (13%) 178 100 1 0.0055883 1 0.58912 1 1 1 0.48851 1 0.60434 1 0.1093 1 0.001252 0.91 0.4242 1 0.046952 1 0.81325 1 0.048337 1 0.043946 1 0.4977 1 del_2q22.3 23 (11%) 182 100 1 0.08259 1 0.59645 1 1 1 0.67045 1 0.44487 1 0.48907 1 0.10451 1 0.58554 1 0.084409 1 0.86145 1 0.6053 1 0.069703 1 0.16163 1 del_3p13 32 (16%) 173 100 1 0.15715 1 0.49224 1 1 1 0.16439 1 0.75064 1 0.72558 1 0.77941 1 0.83795 1 0.64767 1 0.65728 1 0.79297 1 0.40908 1 0.88004 1 del_3q29 11 (5%) 194 100 1 0.27446 1 0.65959 1 1 1 1 1 0.97645 1 0.90604 1 0.97086 1 0.79355 1 0.79161 1 0.68728 1 0.81719 1 0.00037114 0.278 0.99237 1 del_4q28.2 17 (8%) 188 100 1 0.032451 1 0.058833 1 0.64646 1 0.56059 1 0.66121 1 0.18818 1 0.091124 1 0.75518 1 0.12727 1 0.84857 1 0.19305 1 0.00018316 0.139 0.65327 1 del_5q11.2 28 (14%) 177 100 1 0.16103 1 0.00072375 0.534 0.00067363 0.499 1 1 0.048408 1 0.0025957 1 0.0037449 1 0.11451 1 0.0029719 1 0.020778 1 0.98328 1 0.45581 1 0.19649 1 del_5q21.1 36 (18%) 169 100 1 0.023484 1 0.88081 1 0.10077 1 1 1 0.25009 1 0.07251 1 0.0025305 1 0.64129 1 0.041522 1 0.64941 1 0.8993 1 0.39554 1 0.6517 1 del_6q14.3 64 (31%) 141 100 1 0.043325 1 0.49722 1 0.0066731 1 0.024092 1 0.014451 1 0.00081643 0.596 0.00025703 0.194 0.3861 1 0.0009983 0.728 0.0051228 1 0.27698 1 0.078147 1 0.78186 1 del_8p21.3 115 (56%) 90 100 1 0.37219 1 0.00045202 0.336 0.066063 1 0.70381 1 0.01273 1 0.13843 1 0.00019579 0.149 0.1179 1 0.25263 1 0.0015297 1 0.21102 1 0.63207 1 0.35922 1 del_8p11.21 66 (32%) 139 100 1 0.11233 1 0.14274 1 1 1 0.011384 1 0.73499 1 0.77071 1 0.16501 1 0.088912 1 0.48922 1 0.35086 1 0.11397 1 0.13469 1 0.13161 1 del_9p23 18 (9%) 187 100 1 0.782 1 0.28778 1 0.015222 1 0.70472 1 0.15187 1 0.03272 1 0.014506 1 0.48995 1 0.079034 1 0.18967 1 0.28115 1 0.90142 1 0.77735 1 del_10q23.31 67 (33%) 138 100 1 0.8945 1 0.019175 1 0.0028555 1 0.75694 1 0.14924 1 0.0647 1 0.20543 1 0.21111 1 0.018436 1 0.95573 1 0.54731 1 0.15527 1 0.28496 1 del_11q23.2 18 (9%) 187 100 1 0.48735 1 0.0086657 1 1 1 0.56059 1 0.14248 1 0.31667 1 0.2439 1 0.96169 1 0.22576 1 0.24371 1 0.70852 1 0.31376 1 0.951 1 del_12p13.1 43 (21%) 162 100 1 0.95073 1 0.13088 1 0.12855 1 0.54021 1 0.44132 1 0.077659 1 0.011225 1 0.97106 1 0.060389 1 0.83036 1 0.27949 1 0.96774 1 0.56808 1 del_12q24.31 18 (9%) 187 100 1 0.7672 1 0.45081 1 0.3818 1 1 1 1 1 0.10798 1 0.29062 1 0.29388 1 0.13834 1 0.17898 1 0.39066 1 0.023133 1 0.8287 1 del_13q14.12 88 (43%) 117 100 1 0.03083 1 0.57483 1 0.30454 1 0.31229 1 0.23968 1 0.089086 1 0.1985 1 0.34117 1 0.023063 1 0.073948 1 0.53949 1 0.67589 1 0.381 1 del_13q22.1 72 (35%) 133 100 1 0.026681 1 0.12755 1 0.065538 1 0.80422 1 0.12111 1 0.043219 1 0.15411 1 0.1997 1 0.0042352 1 0.018796 1 0.18172 1 0.98341 1 0.40567 1 del_15q21.3 20 (10%) 185 100 1 0.69613 1 0.099886 1 0.015222 1 0.62726 1 0.11192 1 0.0032681 1 0.00067814 0.502 0.39898 1 0.0041005 1 0.35068 1 0.34174 1 0.92142 1 0.3827 1 del_16q22.3 71 (35%) 134 100 1 0.18957 1 0.022519 1 0.18501 1 1 1 0.12294 1 0.0046654 1 0.0012937 0.939 0.4579 1 0.0047496 1 0.08494 1 0.56299 1 0.057792 1 0.3523 1 del_16q23.3 81 (40%) 124 100 1 0.28418 1 0.036118 1 0.4405 1 0.94872 1 0.19993 1 0.0018969 1 0.0026948 1 0.21214 1 0.0025743 1 0.14175 1 0.77608 1 0.040693 1 0.3805 1 del_17p13.1 52 (25%) 153 100 1 0.75194 1 0.012257 1 0.0033556 1 0.52141 1 0.067112 1 0.0025839 1 0.0045309 1 0.15015 1 0.0024413 1 0.11476 1 0.70679 1 0.10222 1 0.64987 1 del_17q21.31 39 (19%) 166 100 1 0.95505 1 0.56146 1 0.7484 1 0.16659 1 0.70577 1 0.58742 1 0.58743 1 0.79643 1 0.58812 1 0.14718 1 0.94993 1 0.96325 1 0.89024 1 del_18q22.1 51 (25%) 154 100 1 0.5336 1 0.34117 1 0.37506 1 0.21953 1 0.48906 1 0.014415 1 0.11116 1 0.048524 1 0.011361 1 0.45752 1 0.68165 1 0.41159 1 0.95955 1 del_19q13.2 17 (8%) 188 100 1 0.13812 1 0.19264 1 0.069417 1 0.2327 1 0.3346 1 0.063387 1 0.043869 1 0.49454 1 0.055836 1 0.30283 1 0.71398 1 0.60463 1 0.41376 1 del_21q22.2 21 (10%) 184 100 1 0.18108 1 0.056717 1 0.0024126 1 0.63856 1 0.061143 1 0.67209 1 0.92714 1 0.52625 1 0.82974 1 0.28321 1 0.24742 1 0.27059 1 0.93226 1 del_21q22.3 58 (28%) 147 100 1 1 1 0.016531 1 0.001748 1 0.29108 1 0.046116 1 0.25631 1 0.42727 1 0.41138 1 0.42239 1 0.22554 1 0.032173 1 0.27446 1 0.54852 1