Clinical Features Time to Death AGE NEOPLASM.DISEASESTAGE PATHOLOGY.T.STAGE PATHOLOGY.N.STAGE PATHOLOGY.M.STAGE GENDER HISTOLOGICAL.TYPE RADIATIONS.RADIATION.REGIMENINDICATION COMPLETENESS.OF.RESECTION NUMBER.OF.LYMPH.NODES nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q 1p gain 30 (10%) 279 0.12578 1 0.37856 1 0.82524 1 0.43247 1 0.8985 1 0.32509 1 0.16901 1 0.014477 1 1 1 0.17295 1 0.23385 1 1q gain 74 (24%) 235 0.41975 1 0.8984 1 0.96705 1 0.55102 1 0.77374 1 0.11954 1 0.1739 1 0.0093676 1 0.36419 1 0.64378 1 0.40744 1 2p gain 50 (16%) 259 0.65053 1 0.99629 1 0.74197 1 0.34195 1 0.76435 1 0.2038 1 0.52828 1 0.21989 1 0.60322 1 0.27679 1 0.23017 1 2q gain 44 (14%) 265 0.85838 1 0.99077 1 0.72276 1 0.67978 1 0.52421 1 0.62504 1 0.40775 1 0.71556 1 0.59887 1 0.31664 1 0.22948 1 3p gain 36 (12%) 273 0.15999 1 0.64313 1 0.93855 1 0.94636 1 0.68678 1 1 1 0.85647 1 0.88764 1 1 1 0.73282 1 0.083841 1 3q gain 59 (19%) 250 0.15349 1 0.11953 1 0.73899 1 0.50061 1 0.60416 1 0.23248 1 0.88267 1 0.99794 1 1 1 0.41771 1 0.11006 1 4p gain 11 (4%) 298 0.28446 1 0.89898 1 0.037985 1 0.14231 1 0.32935 1 0.73963 1 0.21072 1 0.93432 1 1 1 0.28069 1 0.49361 1 4q gain 8 (3%) 301 0.8967 1 0.42969 1 0.54432 1 0.6782 1 0.27192 1 0.22608 1 0.48634 1 0.018333 1 1 1 0.55792 1 0.59019 1 5p gain 69 (22%) 240 0.51213 1 0.40838 1 0.35037 1 0.5992 1 0.78612 1 0.64187 1 0.8891 1 0.0079577 1 0.18826 1 0.45283 1 0.34863 1 5q gain 29 (9%) 280 0.99007 1 0.47816 1 0.40312 1 0.69887 1 0.48857 1 0.71321 1 1 1 0.013519 1 0.50193 1 0.45659 1 0.90838 1 6p gain 56 (18%) 253 0.8216 1 0.72658 1 0.52902 1 0.30475 1 0.9233 1 0.21702 1 0.45028 1 0.042171 1 0.022269 1 0.42284 1 0.04421 1 6q gain 47 (15%) 262 0.42164 1 0.87607 1 0.28731 1 0.61668 1 0.71328 1 0.43611 1 0.424 1 0.067824 1 0.011715 1 0.42267 1 0.17459 1 7p gain 136 (44%) 173 0.093934 1 0.21792 1 0.88711 1 0.79271 1 0.70142 1 0.18441 1 0.12835 1 0.91902 1 0.70346 1 0.86512 1 0.26222 1 7q gain 117 (38%) 192 0.15394 1 0.37507 1 0.80705 1 0.99711 1 0.39274 1 0.022871 1 0.15096 1 0.9021 1 1 1 0.61248 1 0.19531 1 8p gain 126 (41%) 183 0.46588 1 0.027641 1 0.48591 1 0.10572 1 0.84613 1 0.074568 1 0.15586 1 0.67178 1 0.44894 1 0.19951 1 0.94709 1 8q gain 169 (55%) 140 0.55306 1 0.011668 1 0.33235 1 0.045348 1 0.99672 1 0.19383 1 0.64067 1 0.33557 1 0.4624 1 0.31442 1 0.35422 1 9p gain 38 (12%) 271 0.95047 1 0.76111 1 0.31275 1 0.070649 1 0.17081 1 0.36826 1 1 1 0.091975 1 0.208 1 0.77735 1 0.68281 1 9q gain 47 (15%) 262 0.801 1 0.91616 1 0.40171 1 0.24115 1 0.40368 1 0.80445 1 0.51716 1 0.063468 1 0.28889 1 0.60008 1 0.082524 1 10p gain 75 (24%) 234 0.5664 1 0.82803 1 0.48465 1 0.47781 1 0.91108 1 0.80982 1 0.78619 1 0.47308 1 0.67833 1 0.63802 1 0.46822 1 10q gain 52 (17%) 257 0.93471 1 0.27835 1 0.18155 1 0.78936 1 0.58684 1 0.87322 1 0.6445 1 0.8992 1 0.33479 1 0.60784 1 0.332 1 11p gain 32 (10%) 277 0.32984 1 0.52834 1 0.76767 1 0.11687 1 0.26851 1 0.35148 1 0.44534 1 0.741 1 0.53848 1 0.59235 1 0.47754 1 11q gain 38 (12%) 271 0.83822 1 0.81684 1 0.76203 1 0.60452 1 0.022782 1 0.6963 1 0.29367 1 0.66628 1 1 1 0.9349 1 0.67717 1 12p gain 59 (19%) 250 0.16134 1 0.21525 1 0.40451 1 0.024248 1 0.06887 1 0.47327 1 0.76805 1 0.10852 1 0.35375 1 0.064763 1 0.9304 1 12q gain 55 (18%) 254 0.58304 1 0.25492 1 0.44507 1 0.051546 1 0.018094 1 0.82071 1 0.44944 1 0.1199 1 1 1 0.30978 1 0.83097 1 13q gain 102 (33%) 207 0.046303 1 0.96302 1 0.85517 1 0.43857 1 0.92608 1 0.17365 1 1 1 0.18527 1 1 1 0.8855 1 0.84602 1 14q gain 15 (5%) 294 0.0029827 1 0.16839 1 0.85363 1 0.53232 1 0.035195 1 0.37811 1 0.28714 1 0.22521 1 1 1 0.03267 1 0.16832 1 15q gain 25 (8%) 284 0.61651 1 0.79056 1 0.53837 1 0.90883 1 0.045822 1 0.39127 1 0.52424 1 0.94797 1 1 1 0.44376 1 0.98766 1 16p gain 42 (14%) 267 0.45019 1 0.24551 1 0.010094 1 0.37376 1 0.56439 1 0.00015271 0.132 0.73447 1 0.90073 1 0.055369 1 0.1698 1 0.17421 1 16q gain 33 (11%) 276 0.19438 1 0.5241 1 0.003129 1 0.59518 1 0.7479 1 6.5946e-06 0.00573 0.71068 1 0.8132 1 0.16527 1 0.070746 1 0.16056 1 17p gain 19 (6%) 290 0.61317 1 0.19079 1 0.23818 1 0.85914 1 0.87 1 0.0034331 1 1 1 0.079052 1 0.36157 1 0.019537 1 0.86418 1 17q gain 36 (12%) 273 0.49532 1 0.8597 1 0.80737 1 0.57798 1 0.82491 1 0.0046938 1 0.7195 1 0.66828 1 0.58363 1 0.063322 1 0.87098 1 18p gain 53 (17%) 256 0.0057661 1 0.018508 1 0.72879 1 0.60477 1 0.37362 1 0.54498 1 0.75916 1 0.016191 1 0.0020005 1 0.16178 1 0.19093 1 18q gain 40 (13%) 269 0.0085444 1 0.054948 1 0.42968 1 0.24348 1 0.5294 1 0.29246 1 0.60509 1 0.0015629 1 0.048673 1 0.31967 1 0.47636 1 19p gain 40 (13%) 269 0.33665 1 0.47876 1 0.21241 1 0.082897 1 0.029107 1 0.064018 1 0.4897 1 0.043998 1 0.22564 1 0.049527 1 0.050196 1 19q gain 53 (17%) 256 0.40012 1 0.98322 1 0.40007 1 0.37939 1 0.023185 1 0.12957 1 0.53973 1 0.153 1 0.1004 1 0.20787 1 0.015558 1 20p gain 165 (53%) 144 0.5354 1 0.96537 1 0.58657 1 0.20994 1 0.38593 1 0.44638 1 0.019905 1 0.18779 1 0.70886 1 0.5746 1 0.089929 1 20q gain 193 (62%) 116 0.39972 1 0.54472 1 0.45347 1 0.21371 1 0.32506 1 0.11015 1 0.0082541 1 0.0225 1 1 1 0.098671 1 0.22252 1 21q gain 19 (6%) 290 0.5705 1 0.96943 1 0.73234 1 0.50601 1 0.71981 1 0.85244 1 1 1 0.155 1 0.36157 1 0.5191 1 0.93617 1 22q gain 24 (8%) 285 0.27923 1 0.78602 1 0.087073 1 0.29621 1 0.53914 1 1 1 1 1 0.69709 1 1 1 0.80592 1 0.9899 1 xq gain 39 (13%) 270 0.60289 1 0.67549 1 0.00057283 0.496 0.01309 1 0.047979 1 1 1 0.11706 1 0.0032863 1 0.60183 1 0.74036 1 1.764e-05 0.0153 1p loss 40 (13%) 269 0.56766 1 0.99843 1 0.22466 1 0.641 1 0.49354 1 0.078339 1 0.4897 1 0.50289 1 1 1 0.15525 1 0.38422 1 1q loss 19 (6%) 290 0.21984 1 0.74652 1 0.34662 1 0.46872 1 0.63091 1 0.062429 1 0.47717 1 0.87835 1 1 1 0.27497 1 0.94458 1 2p loss 16 (5%) 293 0.12963 1 0.72997 1 0.76502 1 0.95022 1 0.42083 1 0.18746 1 0.19189 1 0.038378 1 0.045404 1 0.15132 1 0.30669 1 2q loss 19 (6%) 290 0.49929 1 0.77825 1 0.92985 1 0.60444 1 0.5174 1 0.25816 1 1 1 0.018698 1 0.062585 1 0.1546 1 0.31738 1 3p loss 59 (19%) 250 0.69345 1 0.74773 1 0.97893 1 0.65245 1 0.18664 1 0.20292 1 0.88267 1 0.41238 1 1 1 0.14082 1 0.045202 1 3q loss 35 (11%) 274 0.77829 1 0.24179 1 0.93699 1 0.0152 1 0.59767 1 0.82494 1 1 1 0.52334 1 1 1 0.5703 1 0.19355 1 4p loss 111 (36%) 198 0.64321 1 0.37053 1 0.19721 1 0.045535 1 0.86854 1 0.21909 1 0.33323 1 0.50339 1 0.25562 1 0.42838 1 0.2236 1 4q loss 110 (36%) 199 0.5781 1 0.16768 1 0.44155 1 0.14687 1 0.435 1 0.63374 1 0.039691 1 0.4615 1 0.25166 1 0.55575 1 0.26251 1 5p loss 37 (12%) 272 0.19127 1 0.54251 1 0.040744 1 0.78001 1 0.39617 1 0.6308 1 0.85994 1 0.27296 1 1 1 1 1 0.90063 1 5q loss 64 (21%) 245 0.46594 1 0.57659 1 0.0083827 1 0.78243 1 0.38768 1 0.22375 1 0.7749 1 0.177 1 0.63734 1 0.51662 1 0.95728 1 6p loss 30 (10%) 279 0.96772 1 0.27065 1 0.66204 1 0.74183 1 0.60316 1 0.076092 1 0.32737 1 0.071932 1 1 1 0.88741 1 0.61692 1 6q loss 40 (13%) 269 0.57252 1 0.60407 1 0.60842 1 0.35096 1 0.8224 1 0.013899 1 0.22623 1 0.35314 1 0.6007 1 0.96913 1 0.74524 1 7p loss 10 (3%) 299 0.12111 1 0.9128 1 0.22824 1 0.18551 1 0.94312 1 0.48255 1 0.32538 1 0.77762 1 1 1 1 1 0.68715 1 7q loss 20 (6%) 289 0.078963 1 0.34462 1 0.22187 1 0.11874 1 0.5598 1 0.7242 1 0.48026 1 0.11408 1 1 1 1 1 0.32322 1 8p loss 51 (17%) 258 0.99676 1 0.34142 1 0.23577 1 0.54526 1 0.14653 1 0.46098 1 0.351 1 0.075304 1 0.3256 1 0.27025 1 0.059467 1 8q loss 16 (5%) 293 0.79098 1 0.57002 1 0.82531 1 0.020092 1 0.53277 1 0.31879 1 0.79499 1 0.49333 1 0.31336 1 0.15074 1 0.21707 1 9p loss 94 (30%) 215 0.54437 1 0.22938 1 0.25613 1 0.41275 1 0.45839 1 0.26725 1 0.52732 1 0.25816 1 0.2056 1 0.38107 1 0.95216 1 9q loss 64 (21%) 245 0.65554 1 0.88468 1 0.25667 1 0.26967 1 0.93074 1 0.015222 1 0.7749 1 0.93636 1 0.03582 1 0.21171 1 0.18652 1 10p loss 35 (11%) 274 0.40327 1 0.37676 1 0.025534 1 0.12033 1 0.1773 1 0.22175 1 0.85522 1 0.24792 1 0.1821 1 0.22876 1 0.22008 1 10q loss 40 (13%) 269 0.40665 1 0.016882 1 0.40879 1 0.22994 1 0.47637 1 1 1 1 1 0.19936 1 0.22564 1 0.57499 1 0.54519 1 11p loss 43 (14%) 266 0.40018 1 0.83872 1 0.73638 1 0.065519 1 0.78217 1 0.1899 1 0.61451 1 0.0061554 1 1 1 0.11788 1 0.30035 1 11q loss 40 (13%) 269 0.030054 1 0.73008 1 0.13752 1 0.67412 1 0.27101 1 0.18996 1 0.38822 1 0.35057 1 1 1 0.18242 1 0.15879 1 12p loss 43 (14%) 266 0.34237 1 0.10177 1 0.36154 1 0.14917 1 0.11189 1 0.43998 1 0.50561 1 0.026416 1 1 1 0.51288 1 0.54203 1 12q loss 33 (11%) 276 0.082781 1 0.20386 1 0.89623 1 0.32644 1 0.29332 1 0.10869 1 0.71068 1 0.37015 1 0.55015 1 0.95851 1 0.71224 1 13q loss 28 (9%) 281 0.42673 1 0.46245 1 0.69161 1 0.91787 1 0.52705 1 0.067596 1 0.3106 1 0.83393 1 0.12514 1 0.056465 1 0.44834 1 14q loss 71 (23%) 238 0.93815 1 0.22261 1 0.11883 1 0.25108 1 0.26908 1 0.014815 1 1 1 0.88278 1 0.66252 1 0.16642 1 0.67578 1 15q loss 58 (19%) 251 0.93675 1 0.33887 1 0.70281 1 0.0060947 1 0.79494 1 0.29495 1 0.37389 1 0.0019179 1 0.025264 1 0.65181 1 0.16698 1 16p loss 62 (20%) 247 0.72978 1 0.011423 1 0.52265 1 0.35978 1 0.15473 1 0.54795 1 0.8854 1 0.12192 1 0.63093 1 0.63685 1 0.53452 1 16q loss 71 (23%) 238 0.29136 1 0.1607 1 0.17919 1 0.32142 1 0.71574 1 0.11216 1 0.41091 1 0.068642 1 0.20082 1 0.505 1 0.9851 1 17p loss 106 (34%) 203 0.75594 1 0.88981 1 0.54991 1 0.1423 1 0.86634 1 0.81142 1 0.39135 1 0.011579 1 0.049129 1 0.13998 1 0.25827 1 17q loss 48 (16%) 261 0.95093 1 0.64038 1 0.30041 1 0.53994 1 0.098677 1 0.92789 1 0.20232 1 0.53403 1 0.29805 1 0.92845 1 0.31849 1 18p loss 84 (27%) 225 0.31827 1 0.93034 1 0.23584 1 0.26407 1 0.88965 1 0.86662 1 0.29757 1 0.63732 1 0.19583 1 0.75378 1 0.14749 1 18q loss 103 (33%) 206 0.48241 1 0.5591 1 0.17144 1 0.018296 1 0.85249 1 0.7745 1 0.45926 1 0.80575 1 1 1 0.80556 1 0.064091 1 19p loss 72 (23%) 237 0.027622 1 0.10588 1 0.96568 1 0.77391 1 0.85492 1 0.89874 1 1 1 0.033179 1 0.36011 1 0.72288 1 0.27423 1 19q loss 56 (18%) 253 0.19639 1 0.023867 1 0.84315 1 0.4691 1 0.51902 1 0.88137 1 1 1 0.012968 1 0.11499 1 0.72212 1 0.70567 1 20p loss 16 (5%) 293 0.083176 1 0.50946 1 0.25742 1 1 1 0.55876 1 0.0058915 1 0.066658 1 0.68066 1 0.045404 1 0.19188 1 0.95024 1 21q loss 108 (35%) 201 0.96112 1 0.026866 1 0.47911 1 0.023229 1 0.94343 1 0.63077 1 0.087454 1 0.96563 1 0.24409 1 0.96946 1 0.76528 1 22q loss 91 (29%) 218 0.17868 1 0.87018 1 0.51951 1 0.048548 1 0.64403 1 0.63263 1 0.44608 1 0.85041 1 0.025149 1 0.45055 1 0.16561 1 xq loss 35 (11%) 274 0.85076 1 0.44733 1 0.99424 1 0.47457 1 0.8756 1 1 1 0.042369 1 0.64472 1 0.1821 1 0.010534 1 0.38329 1