[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"         "-nVNozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"        "-oTBLCA-TP"
[1] "opt"       "-OPMUTSIG"
[1] "tl" ""  
[1] "dx" ""  
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/BLCA-TP/10668130/BLCA-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/BLCA-TP/10013674/transformed.cor.cli.txt"

nPatients in clinical file=367, in cluster file=264, common to both=264
[1]  70 264
[1] "AMP PEAK  1(1P34.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE 
                           70                           194 
  AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE 
                           70                           194 
[1] "AMP PEAK  2(1Q21.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                          128                           136 
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                          128                           136 
[1] "AMP PEAK  3(1Q23.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE 
                          135                           129 
  AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE 
                          135                           129 
[1] "AMP PEAK  4(3P25.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE 
                          127                           137 
  AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE 
                          127                           137 
[1] "AMP PEAK  5(3Q26.32) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE 
                           142                            122 
  AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE 
                           142                            122 
[1] "AMP PEAK  6(4P16.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE 
                           53                           211 
  AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE 
                           53                           211 
[1] "AMP PEAK  7(4Q13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE 
                           49                           215 
  AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE 
                           49                           215 
[1] "AMP PEAK  8(4Q31.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  8(4Q31.21) MUTATED AMP PEAK  8(4Q31.21) WILD-TYPE 
                            29                            235 
  AMP PEAK  8(4Q31.21) MUTATED AMP PEAK  8(4Q31.21) WILD-TYPE 
                            29                            235 
[1] "AMP PEAK  9(5P15.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE 
                           131                            133 
  AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE 
                           131                            133 
[1] "AMP PEAK 10(6P22.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE 
                          111                           153 
  AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE 
                          111                           153 
[1] "AMP PEAK 11(6Q21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE 
                         23                         241 
  AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE 
                         23                         241 
[1] "AMP PEAK 12(7P21.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 12(7P21.1) MUTATED AMP PEAK 12(7P21.1) WILD-TYPE 
                          134                           130 
  AMP PEAK 12(7P21.1) MUTATED AMP PEAK 12(7P21.1) WILD-TYPE 
                          134                           130 
[1] "AMP PEAK 13(7P11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE 
                          131                           133 
  AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE 
                          131                           133 
[1] "AMP PEAK 14(8P11.23) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE 
                            84                            180 
  AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE 
                            84                            180 
[1] "AMP PEAK 15(8P11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 15(8P11.21) MUTATED AMP PEAK 15(8P11.21) WILD-TYPE 
                            86                            178 
  AMP PEAK 15(8P11.21) MUTATED AMP PEAK 15(8P11.21) WILD-TYPE 
                            86                            178 
[1] "AMP PEAK 16(8Q22.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 16(8Q22.3) MUTATED AMP PEAK 16(8Q22.3) WILD-TYPE 
                          169                            95 
  AMP PEAK 16(8Q22.3) MUTATED AMP PEAK 16(8Q22.3) WILD-TYPE 
                          169                            95 
[1] "AMP PEAK 17(9P24.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 17(9P24.1) MUTATED AMP PEAK 17(9P24.1) WILD-TYPE 
                           53                           211 
  AMP PEAK 17(9P24.1) MUTATED AMP PEAK 17(9P24.1) WILD-TYPE 
                           53                           211 
[1] "AMP PEAK 18(10P14) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 18(10P14) MUTATED AMP PEAK 18(10P14) WILD-TYPE 
                         116                          148 
  AMP PEAK 18(10P14) MUTATED AMP PEAK 18(10P14) WILD-TYPE 
                         116                          148 
[1] "AMP PEAK 19(11Q13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 19(11Q13.3) MUTATED AMP PEAK 19(11Q13.3) WILD-TYPE 
                           101                            163 
  AMP PEAK 19(11Q13.3) MUTATED AMP PEAK 19(11Q13.3) WILD-TYPE 
                           101                            163 
[1] "AMP PEAK 20(11Q22.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 20(11Q22.2) MUTATED AMP PEAK 20(11Q22.2) WILD-TYPE 
                            49                            215 
  AMP PEAK 20(11Q22.2) MUTATED AMP PEAK 20(11Q22.2) WILD-TYPE 
                            49                            215 
[1] "AMP PEAK 21(12Q15) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE 
                          77                          187 
  AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE 
                          77                          187 
[1] "AMP PEAK 22(13Q22.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 22(13Q22.1) MUTATED AMP PEAK 22(13Q22.1) WILD-TYPE 
                            84                            180 
  AMP PEAK 22(13Q22.1) MUTATED AMP PEAK 22(13Q22.1) WILD-TYPE 
                            84                            180 
[1] "AMP PEAK 23(14Q11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 23(14Q11.2) MUTATED AMP PEAK 23(14Q11.2) WILD-TYPE 
                            63                            201 
  AMP PEAK 23(14Q11.2) MUTATED AMP PEAK 23(14Q11.2) WILD-TYPE 
                            63                            201 
[1] "AMP PEAK 24(16P13.13) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 24(16P13.13) MUTATED AMP PEAK 24(16P13.13) WILD-TYPE 
                             56                             208 
  AMP PEAK 24(16P13.13) MUTATED AMP PEAK 24(16P13.13) WILD-TYPE 
                             56                             208 
[1] "AMP PEAK 25(16P11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 25(16P11.2) MUTATED AMP PEAK 25(16P11.2) WILD-TYPE 
                            64                            200 
  AMP PEAK 25(16P11.2) MUTATED AMP PEAK 25(16P11.2) WILD-TYPE 
                            64                            200 
[1] "AMP PEAK 26(16Q22.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 26(16Q22.1) MUTATED AMP PEAK 26(16Q22.1) WILD-TYPE 
                            75                            189 
  AMP PEAK 26(16Q22.1) MUTATED AMP PEAK 26(16Q22.1) WILD-TYPE 
                            75                            189 
[1] "AMP PEAK 27(17Q11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 27(17Q11.2) MUTATED AMP PEAK 27(17Q11.2) WILD-TYPE 
                           117                            147 
  AMP PEAK 27(17Q11.2) MUTATED AMP PEAK 27(17Q11.2) WILD-TYPE 
                           117                            147 
[1] "AMP PEAK 28(17Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 28(17Q12) MUTATED AMP PEAK 28(17Q12) WILD-TYPE 
                         110                          154 
  AMP PEAK 28(17Q12) MUTATED AMP PEAK 28(17Q12) WILD-TYPE 
                         110                          154 
[1] "AMP PEAK 29(19Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 29(19Q12) MUTATED AMP PEAK 29(19Q12) WILD-TYPE 
                         109                          155 
  AMP PEAK 29(19Q12) MUTATED AMP PEAK 29(19Q12) WILD-TYPE 
                         109                          155 
[1] "AMP PEAK 30(19Q13.43) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 30(19Q13.43) MUTATED AMP PEAK 30(19Q13.43) WILD-TYPE 
                            103                             161 
  AMP PEAK 30(19Q13.43) MUTATED AMP PEAK 30(19Q13.43) WILD-TYPE 
                            103                             161 
[1] "AMP PEAK 31(20Q11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 31(20Q11.21) MUTATED AMP PEAK 31(20Q11.21) WILD-TYPE 
                            171                              93 
  AMP PEAK 31(20Q11.21) MUTATED AMP PEAK 31(20Q11.21) WILD-TYPE 
                            171                              93 
[1] "AMP PEAK 32(22Q11.23) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 32(22Q11.23) MUTATED AMP PEAK 32(22Q11.23) WILD-TYPE 
                             55                             209 
  AMP PEAK 32(22Q11.23) MUTATED AMP PEAK 32(22Q11.23) WILD-TYPE 
                             55                             209 
[1] "DEL PEAK  1(1P36.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE 
                            52                            212 
  DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE 
                            52                            212 
[1] "DEL PEAK  2(1Q32.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE 
                           47                           217 
  DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE 
                           47                           217 
[1] "DEL PEAK  3(2Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE 
                           80                           184 
  DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE 
                           80                           184 
[1] "DEL PEAK  4(2Q37.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  4(2Q37.1) MUTATED DEL PEAK  4(2Q37.1) WILD-TYPE 
                          130                           134 
  DEL PEAK  4(2Q37.1) MUTATED DEL PEAK  4(2Q37.1) WILD-TYPE 
                          130                           134 
[1] "DEL PEAK  5(3P21.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  5(3P21.31) MUTATED DEL PEAK  5(3P21.31) WILD-TYPE 
                            77                            187 
  DEL PEAK  5(3P21.31) MUTATED DEL PEAK  5(3P21.31) WILD-TYPE 
                            77                            187 
[1] "DEL PEAK  6(3P14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE 
                           75                           189 
  DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE 
                           75                           189 
[1] "DEL PEAK  7(3P13) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE 
                         71                         193 
  DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE 
                         71                         193 
[1] "DEL PEAK  8(4Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  8(4Q22.1) MUTATED DEL PEAK  8(4Q22.1) WILD-TYPE 
                          109                           155 
  DEL PEAK  8(4Q22.1) MUTATED DEL PEAK  8(4Q22.1) WILD-TYPE 
                          109                           155 
[1] "DEL PEAK  9(4Q34.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  9(4Q34.2) MUTATED DEL PEAK  9(4Q34.2) WILD-TYPE 
                          119                           145 
  DEL PEAK  9(4Q34.2) MUTATED DEL PEAK  9(4Q34.2) WILD-TYPE 
                          119                           145 
[1] "DEL PEAK 10(5Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 10(5Q11.2) MUTATED DEL PEAK 10(5Q11.2) WILD-TYPE 
                          133                           131 
  DEL PEAK 10(5Q11.2) MUTATED DEL PEAK 10(5Q11.2) WILD-TYPE 
                          133                           131 
[1] "DEL PEAK 11(5Q35.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 11(5Q35.1) MUTATED DEL PEAK 11(5Q35.1) WILD-TYPE 
                          126                           138 
  DEL PEAK 11(5Q35.1) MUTATED DEL PEAK 11(5Q35.1) WILD-TYPE 
                          126                           138 
[1] "DEL PEAK 12(6P25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 12(6P25.3) MUTATED DEL PEAK 12(6P25.3) WILD-TYPE 
                           69                           195 
  DEL PEAK 12(6P25.3) MUTATED DEL PEAK 12(6P25.3) WILD-TYPE 
                           69                           195 
[1] "DEL PEAK 13(6Q21) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 13(6Q21) MUTATED DEL PEAK 13(6Q21) WILD-TYPE 
                        117                         147 
  DEL PEAK 13(6Q21) MUTATED DEL PEAK 13(6Q21) WILD-TYPE 
                        117                         147 
[1] "DEL PEAK 14(6Q27) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 14(6Q27) MUTATED DEL PEAK 14(6Q27) WILD-TYPE 
                        119                         145 
  DEL PEAK 14(6Q27) MUTATED DEL PEAK 14(6Q27) WILD-TYPE 
                        119                         145 
[1] "DEL PEAK 15(7Q36.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 15(7Q36.3) MUTATED DEL PEAK 15(7Q36.3) WILD-TYPE 
                           39                           225 
  DEL PEAK 15(7Q36.3) MUTATED DEL PEAK 15(7Q36.3) WILD-TYPE 
                           39                           225 
[1] "DEL PEAK 16(8P23.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE 
                          151                           113 
  DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE 
                          151                           113 
[1] "DEL PEAK 17(8P12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 17(8P12) MUTATED DEL PEAK 17(8P12) WILD-TYPE 
                        129                         135 
  DEL PEAK 17(8P12) MUTATED DEL PEAK 17(8P12) WILD-TYPE 
                        129                         135 
[1] "DEL PEAK 18(8P11.21) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 18(8P11.21) MUTATED DEL PEAK 18(8P11.21) WILD-TYPE 
                            69                            195 
  DEL PEAK 18(8P11.21) MUTATED DEL PEAK 18(8P11.21) WILD-TYPE 
                            69                            195 
[1] "DEL PEAK 19(9P23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE 
                        115                         149 
  DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE 
                        115                         149 
[1] "DEL PEAK 20(9P21.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE 
                          157                           107 
  DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE 
                          157                           107 
[1] "DEL PEAK 21(9Q33.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 21(9Q33.2) MUTATED DEL PEAK 21(9Q33.2) WILD-TYPE 
                          104                           160 
  DEL PEAK 21(9Q33.2) MUTATED DEL PEAK 21(9Q33.2) WILD-TYPE 
                          104                           160 
[1] "DEL PEAK 22(10P12.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 22(10P12.1) MUTATED DEL PEAK 22(10P12.1) WILD-TYPE 
                            43                            221 
  DEL PEAK 22(10P12.1) MUTATED DEL PEAK 22(10P12.1) WILD-TYPE 
                            43                            221 
[1] "DEL PEAK 23(10Q23.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 23(10Q23.31) MUTATED DEL PEAK 23(10Q23.31) WILD-TYPE 
                            106                             158 
  DEL PEAK 23(10Q23.31) MUTATED DEL PEAK 23(10Q23.31) WILD-TYPE 
                            106                             158 
[1] "DEL PEAK 24(11P15.5) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE 
                           129                            135 
  DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE 
                           129                            135 
[1] "DEL PEAK 25(11Q23.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 25(11Q23.3) MUTATED DEL PEAK 25(11Q23.3) WILD-TYPE 
                           100                            164 
  DEL PEAK 25(11Q23.3) MUTATED DEL PEAK 25(11Q23.3) WILD-TYPE 
                           100                            164 
[1] "DEL PEAK 26(13Q14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE 
                           103                            161 
  DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE 
                           103                            161 
[1] "DEL PEAK 27(14Q12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 27(14Q12) MUTATED DEL PEAK 27(14Q12) WILD-TYPE 
                          80                          184 
  DEL PEAK 27(14Q12) MUTATED DEL PEAK 27(14Q12) WILD-TYPE 
                          80                          184 
[1] "DEL PEAK 28(14Q24.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 28(14Q24.1) MUTATED DEL PEAK 28(14Q24.1) WILD-TYPE 
                            86                            178 
  DEL PEAK 28(14Q24.1) MUTATED DEL PEAK 28(14Q24.1) WILD-TYPE 
                            86                            178 
[1] "DEL PEAK 29(15Q13.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 29(15Q13.1) MUTATED DEL PEAK 29(15Q13.1) WILD-TYPE 
                           107                            157 
  DEL PEAK 29(15Q13.1) MUTATED DEL PEAK 29(15Q13.1) WILD-TYPE 
                           107                            157 
[1] "DEL PEAK 30(16P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 30(16P13.3) MUTATED DEL PEAK 30(16P13.3) WILD-TYPE 
                           104                            160 
  DEL PEAK 30(16P13.3) MUTATED DEL PEAK 30(16P13.3) WILD-TYPE 
                           104                            160 
[1] "DEL PEAK 31(16Q23.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 31(16Q23.1) MUTATED DEL PEAK 31(16Q23.1) WILD-TYPE 
                            73                            191 
  DEL PEAK 31(16Q23.1) MUTATED DEL PEAK 31(16Q23.1) WILD-TYPE 
                            73                            191 
[1] "DEL PEAK 32(17P12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 32(17P12) MUTATED DEL PEAK 32(17P12) WILD-TYPE 
                         137                          127 
  DEL PEAK 32(17P12) MUTATED DEL PEAK 32(17P12) WILD-TYPE 
                         137                          127 
[1] "DEL PEAK 33(18Q21.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 33(18Q21.2) MUTATED DEL PEAK 33(18Q21.2) WILD-TYPE 
                           115                            149 
  DEL PEAK 33(18Q21.2) MUTATED DEL PEAK 33(18Q21.2) WILD-TYPE 
                           115                            149 
[1] "DEL PEAK 34(19P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 34(19P13.3) MUTATED DEL PEAK 34(19P13.3) WILD-TYPE 
                            96                            168 
  DEL PEAK 34(19P13.3) MUTATED DEL PEAK 34(19P13.3) WILD-TYPE 
                            96                            168 
[1] "DEL PEAK 35(22Q13.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE 
                            118                             146 
  DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE 
                            118                             146 
[1] "DEL PEAK 36(XP11.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 36(XP11.3) MUTATED DEL PEAK 36(XP11.3) WILD-TYPE 
                           62                           202 
  DEL PEAK 36(XP11.3) MUTATED DEL PEAK 36(XP11.3) WILD-TYPE 
                           62                           202 
[1] "DEL PEAK 37(XQ21.33) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 37(XQ21.33) MUTATED DEL PEAK 37(XQ21.33) WILD-TYPE 
                            53                            211 
  DEL PEAK 37(XQ21.33) MUTATED DEL PEAK 37(XQ21.33) WILD-TYPE 
                            53                            211 
[1] "DEL PEAK 38(XQ23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 38(XQ23) MUTATED DEL PEAK 38(XQ23) WILD-TYPE 
                         49                         215 
  DEL PEAK 38(XQ23) MUTATED DEL PEAK 38(XQ23) WILD-TYPE 
                         49                         215 
[1] "terrence_modification_tag"
[1] TRUE
[1] "data2feature, selection=ALL"
 [1] "CN_CNMF"                     "METHLYATION_CNMF"           
 [3] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [5] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [7] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
 [9] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 10 rows and 264 columns.

Variable 1:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'RPPA_CNMF':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'RPPA_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MRNASEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=7,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MIRSEQ_MATURE_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
 [1] "CN_CNMF"                     "METHLYATION_CNMF"           
 [3] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [5] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [7] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
 [9] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 264 columns, 0 survival variables, and 10 non-survival variables.
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=4, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=5, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=7, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = AMP PEAK  1(1P34.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       33     17     20
  AMP PEAK  1(1P34.2) WILD-TYPE     34     79     81
D1V1, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          33                            34
  CLUS_2                          17                            79
  CLUS_3                          20                            81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P34.2) MUTATED       22     28     10      8
  AMP PEAK  1(1P34.2) WILD-TYPE     67     32     44     39
D1V2, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          22                            67
  CLUS_2                          28                            32
  CLUS_3                          10                            44
  CLUS_4                           8                            39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  1(1P34.2) MUTATED       11     10      9      0     10
  AMP PEAK  1(1P34.2) WILD-TYPE     26     19     25      5      9
D1V3, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          11                            26
  CLUS_2                          10                            19
  CLUS_3                           9                            25
  CLUS_4                           0                             5
  CLUS_5                          10                             9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P34.2) MUTATED       10     16      8      6
  AMP PEAK  1(1P34.2) WILD-TYPE     32     22     18     12
D1V4, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          10                            32
  CLUS_2                          16                            22
  CLUS_3                           8                            18
  CLUS_4                           6                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       29     20     21
  AMP PEAK  1(1P34.2) WILD-TYPE     89     52     52
D1V5, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          29                            89
  CLUS_2                          20                            52
  CLUS_3                          21                            52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P34.2) MUTATED       21     15     19     15
  AMP PEAK  1(1P34.2) WILD-TYPE     75     29     45     44
D1V6, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          21                            75
  CLUS_2                          15                            29
  CLUS_3                          19                            45
  CLUS_4                          15                            44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       21     24     25
  AMP PEAK  1(1P34.2) WILD-TYPE     42     91     60
D1V7, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          21                            42
  CLUS_2                          24                            91
  CLUS_3                          25                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  1(1P34.2) MUTATED       12      8      9     12     15      7
  AMP PEAK  1(1P34.2) WILD-TYPE     32     16     22     22     32     29
                               vv
clus                            CLUS_7
  AMP PEAK  1(1P34.2) MUTATED        7
  AMP PEAK  1(1P34.2) WILD-TYPE     40
D1V8, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          12                            32
  CLUS_2                           8                            16
  CLUS_3                           9                            22
  CLUS_4                          12                            22
  CLUS_5                          15                            32
  CLUS_6                           7                            29
  CLUS_7                           7                            40
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       14     30     26
  AMP PEAK  1(1P34.2) WILD-TYPE     33     82     78
D1V9, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          14                            33
  CLUS_2                          30                            82
  CLUS_3                          26                            78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       12     36     22
  AMP PEAK  1(1P34.2) WILD-TYPE     31     96     66
D1V10, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          12                            31
  CLUS_2                          36                            96
  CLUS_3                          22                            66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(2) Variable = AMP PEAK  2(1Q21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q21.3) MUTATED       55     35     38
  AMP PEAK  2(1Q21.3) WILD-TYPE     12     61     63
D2V1, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          55                            12
  CLUS_2                          35                            61
  CLUS_3                          38                            63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1Q21.3) MUTATED       34     46     23     20
  AMP PEAK  2(1Q21.3) WILD-TYPE     55     14     31     27
D2V2, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          34                            55
  CLUS_2                          46                            14
  CLUS_3                          23                            31
  CLUS_4                          20                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  2(1Q21.3) MUTATED       20     15     22      1      9
  AMP PEAK  2(1Q21.3) WILD-TYPE     17     14     12      4     10
D2V3, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          20                            17
  CLUS_2                          15                            14
  CLUS_3                          22                            12
  CLUS_4                           1                             4
  CLUS_5                           9                            10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1Q21.3) MUTATED       22     21     16      8
  AMP PEAK  2(1Q21.3) WILD-TYPE     20     17     10     10
D2V4, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          22                            20
  CLUS_2                          21                            17
  CLUS_3                          16                            10
  CLUS_4                           8                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q21.3) MUTATED       61     41     26
  AMP PEAK  2(1Q21.3) WILD-TYPE     57     31     47
D2V5, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          61                            57
  CLUS_2                          41                            31
  CLUS_3                          26                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1Q21.3) MUTATED       50     24     35     19
  AMP PEAK  2(1Q21.3) WILD-TYPE     46     20     29     40
D2V6, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          50                            46
  CLUS_2                          24                            20
  CLUS_3                          35                            29
  CLUS_4                          19                            40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q21.3) MUTATED       38     47     43
  AMP PEAK  2(1Q21.3) WILD-TYPE     25     68     42
D2V7, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          38                            25
  CLUS_2                          47                            68
  CLUS_3                          43                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  2(1Q21.3) MUTATED       29     11     19     19     24      9
  AMP PEAK  2(1Q21.3) WILD-TYPE     15     13     12     15     23     27
                               vv
clus                            CLUS_7
  AMP PEAK  2(1Q21.3) MUTATED       17
  AMP PEAK  2(1Q21.3) WILD-TYPE     30
D2V8, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          29                            15
  CLUS_2                          11                            13
  CLUS_3                          19                            12
  CLUS_4                          19                            15
  CLUS_5                          24                            23
  CLUS_6                           9                            27
  CLUS_7                          17                            30
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q21.3) MUTATED       27     50     51
  AMP PEAK  2(1Q21.3) WILD-TYPE     20     62     53
D2V9, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          27                            20
  CLUS_2                          50                            62
  CLUS_3                          51                            53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q21.3) MUTATED       26     57     45
  AMP PEAK  2(1Q21.3) WILD-TYPE     17     75     43
D2V10, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          26                            17
  CLUS_2                          57                            75
  CLUS_3                          45                            43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(3) Variable = AMP PEAK  3(1Q23.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q23.3) MUTATED       57     37     41
  AMP PEAK  3(1Q23.3) WILD-TYPE     10     59     60
D3V1, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          57                            10
  CLUS_2                          37                            59
  CLUS_3                          41                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q23.3) MUTATED       40     44     24     21
  AMP PEAK  3(1Q23.3) WILD-TYPE     49     16     30     26
D3V2, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          40                            49
  CLUS_2                          44                            16
  CLUS_3                          24                            30
  CLUS_4                          21                            26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  3(1Q23.3) MUTATED       22     16     21      1     11
  AMP PEAK  3(1Q23.3) WILD-TYPE     15     13     13      4      8
D3V3, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          22                            15
  CLUS_2                          16                            13
  CLUS_3                          21                            13
  CLUS_4                           1                             4
  CLUS_5                          11                             8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q23.3) MUTATED       22     22     16     11
  AMP PEAK  3(1Q23.3) WILD-TYPE     20     16     10      7
D3V4, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          22                            20
  CLUS_2                          22                            16
  CLUS_3                          16                            10
  CLUS_4                          11                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q23.3) MUTATED       66     39     30
  AMP PEAK  3(1Q23.3) WILD-TYPE     52     33     43
D3V5, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          66                            52
  CLUS_2                          39                            33
  CLUS_3                          30                            43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q23.3) MUTATED       52     23     36     24
  AMP PEAK  3(1Q23.3) WILD-TYPE     44     21     28     35
D3V6, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          52                            44
  CLUS_2                          23                            21
  CLUS_3                          36                            28
  CLUS_4                          24                            35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q23.3) MUTATED       43     48     44
  AMP PEAK  3(1Q23.3) WILD-TYPE     20     67     41
D3V7, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          43                            20
  CLUS_2                          48                            67
  CLUS_3                          44                            41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  3(1Q23.3) MUTATED       32     13     18     17     24     12
  AMP PEAK  3(1Q23.3) WILD-TYPE     12     11     13     17     23     24
                               vv
clus                            CLUS_7
  AMP PEAK  3(1Q23.3) MUTATED       19
  AMP PEAK  3(1Q23.3) WILD-TYPE     28
D3V8, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          32                            12
  CLUS_2                          13                            11
  CLUS_3                          18                            13
  CLUS_4                          17                            17
  CLUS_5                          24                            23
  CLUS_6                          12                            24
  CLUS_7                          19                            28
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q23.3) MUTATED       32     54     49
  AMP PEAK  3(1Q23.3) WILD-TYPE     15     58     55
D3V9, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          32                            15
  CLUS_2                          54                            58
  CLUS_3                          49                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q23.3) MUTATED       29     61     45
  AMP PEAK  3(1Q23.3) WILD-TYPE     14     71     43
D3V10, multiclass
        clus
vv       AMP PEAK  3(1Q23.3) MUTATED AMP PEAK  3(1Q23.3) WILD-TYPE
  CLUS_1                          29                            14
  CLUS_2                          61                            71
  CLUS_3                          45                            43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(4) Variable = AMP PEAK  4(3P25.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3P25.2) MUTATED       53     28     46
  AMP PEAK  4(3P25.2) WILD-TYPE     14     68     55
D4V1, multiclass
        clus
vv       AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE
  CLUS_1                          53                            14
  CLUS_2                          28                            68
  CLUS_3                          46                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3P25.2) MUTATED       29     43     25     25
  AMP PEAK  4(3P25.2) WILD-TYPE     60     17     29     22
D4V2, multiclass
        clus
vv       AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE
  CLUS_1                          29                            60
  CLUS_2                          43                            17
  CLUS_3                          25                            29
  CLUS_4                          25                            22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  4(3P25.2) MUTATED       24     11     13      1     10
  AMP PEAK  4(3P25.2) WILD-TYPE     13     18     21      4      9
D4V3, multiclass
        clus
vv       AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE
  CLUS_1                          24                            13
  CLUS_2                          11                            18
  CLUS_3                          13                            21
  CLUS_4                           1                             4
  CLUS_5                          10                             9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3P25.2) MUTATED       28     16      7      8
  AMP PEAK  4(3P25.2) WILD-TYPE     14     22     19     10
D4V4, multiclass
        clus
vv       AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE
  CLUS_1                          28                            14
  CLUS_2                          16                            22
  CLUS_3                           7                            19
  CLUS_4                           8                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3P25.2) MUTATED       72     37     18
  AMP PEAK  4(3P25.2) WILD-TYPE     46     35     55
D4V5, multiclass
        clus
vv       AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE
  CLUS_1                          72                            46
  CLUS_2                          37                            35
  CLUS_3                          18                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3P25.2) MUTATED       57     20     38     12
  AMP PEAK  4(3P25.2) WILD-TYPE     39     24     26     47
D4V6, multiclass
        clus
vv       AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE
  CLUS_1                          57                            39
  CLUS_2                          20                            24
  CLUS_3                          38                            26
  CLUS_4                          12                            47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3P25.2) MUTATED       45     50     31
  AMP PEAK  4(3P25.2) WILD-TYPE     18     65     54
D4V7, multiclass
        clus
vv       AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE
  CLUS_1                          45                            18
  CLUS_2                          50                            65
  CLUS_3                          31                            54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  4(3P25.2) MUTATED       34     11     23     13     22     10
  AMP PEAK  4(3P25.2) WILD-TYPE     10     13      8     21     25     26
                               vv
clus                            CLUS_7
  AMP PEAK  4(3P25.2) MUTATED       13
  AMP PEAK  4(3P25.2) WILD-TYPE     34
D4V8, multiclass
        clus
vv       AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE
  CLUS_1                          34                            10
  CLUS_2                          11                            13
  CLUS_3                          23                             8
  CLUS_4                          13                            21
  CLUS_5                          22                            25
  CLUS_6                          10                            26
  CLUS_7                          13                            34
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3P25.2) MUTATED       36     41     49
  AMP PEAK  4(3P25.2) WILD-TYPE     11     71     55
D4V9, multiclass
        clus
vv       AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE
  CLUS_1                          36                            11
  CLUS_2                          41                            71
  CLUS_3                          49                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3P25.2) MUTATED       33     51     42
  AMP PEAK  4(3P25.2) WILD-TYPE     10     81     46
D4V10, multiclass
        clus
vv       AMP PEAK  4(3P25.2) MUTATED AMP PEAK  4(3P25.2) WILD-TYPE
  CLUS_1                          33                            10
  CLUS_2                          51                            81
  CLUS_3                          42                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(5) Variable = AMP PEAK  5(3Q26.32) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3Q26.32) MUTATED       51     36     55
  AMP PEAK  5(3Q26.32) WILD-TYPE     16     60     46
D5V1, multiclass
        clus
vv       AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE
  CLUS_1                           51                             16
  CLUS_2                           36                             60
  CLUS_3                           55                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(3Q26.32) MUTATED       45     37     30     24
  AMP PEAK  5(3Q26.32) WILD-TYPE     44     23     24     23
D5V2, multiclass
        clus
vv       AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE
  CLUS_1                           45                             44
  CLUS_2                           37                             23
  CLUS_3                           30                             24
  CLUS_4                           24                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  5(3Q26.32) MUTATED       22     13     23      3      9
  AMP PEAK  5(3Q26.32) WILD-TYPE     15     16     11      2     10
D5V3, multiclass
        clus
vv       AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE
  CLUS_1                           22                             15
  CLUS_2                           13                             16
  CLUS_3                           23                             11
  CLUS_4                            3                              2
  CLUS_5                            9                             10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(3Q26.32) MUTATED       23     17     19     11
  AMP PEAK  5(3Q26.32) WILD-TYPE     19     21      7      7
D5V4, multiclass
        clus
vv       AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE
  CLUS_1                           23                             19
  CLUS_2                           17                             21
  CLUS_3                           19                              7
  CLUS_4                           11                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3Q26.32) MUTATED       61     39     42
  AMP PEAK  5(3Q26.32) WILD-TYPE     57     33     31
D5V5, multiclass
        clus
vv       AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE
  CLUS_1                           61                             57
  CLUS_2                           39                             33
  CLUS_3                           42                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(3Q26.32) MUTATED       49     20     39     34
  AMP PEAK  5(3Q26.32) WILD-TYPE     47     24     25     25
D5V6, multiclass
        clus
vv       AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE
  CLUS_1                           49                             47
  CLUS_2                           20                             24
  CLUS_3                           39                             25
  CLUS_4                           34                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3Q26.32) MUTATED       37     58     46
  AMP PEAK  5(3Q26.32) WILD-TYPE     26     57     39
D5V7, multiclass
        clus
vv       AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE
  CLUS_1                           37                             26
  CLUS_2                           58                             57
  CLUS_3                           46                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  5(3Q26.32) MUTATED       30     11     21     19     27     19
  AMP PEAK  5(3Q26.32) WILD-TYPE     14     13     10     15     20     17
                                vv
clus                             CLUS_7
  AMP PEAK  5(3Q26.32) MUTATED       14
  AMP PEAK  5(3Q26.32) WILD-TYPE     33
D5V8, multiclass
        clus
vv       AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE
  CLUS_1                           30                             14
  CLUS_2                           11                             13
  CLUS_3                           21                             10
  CLUS_4                           19                             15
  CLUS_5                           27                             20
  CLUS_6                           19                             17
  CLUS_7                           14                             33
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3Q26.32) MUTATED       29     60     52
  AMP PEAK  5(3Q26.32) WILD-TYPE     18     52     52
D5V9, multiclass
        clus
vv       AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE
  CLUS_1                           29                             18
  CLUS_2                           60                             52
  CLUS_3                           52                             52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3Q26.32) MUTATED       28     73     40
  AMP PEAK  5(3Q26.32) WILD-TYPE     15     59     48
D5V10, multiclass
        clus
vv       AMP PEAK  5(3Q26.32) MUTATED AMP PEAK  5(3Q26.32) WILD-TYPE
  CLUS_1                           28                             15
  CLUS_2                           73                             59
  CLUS_3                           40                             48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(6) Variable = AMP PEAK  6(4P16.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(4P16.3) MUTATED       16      9     28
  AMP PEAK  6(4P16.3) WILD-TYPE     51     87     73
D6V1, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                          16                            51
  CLUS_2                           9                            87
  CLUS_3                          28                            73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(4P16.3) MUTATED       11     17     15      9
  AMP PEAK  6(4P16.3) WILD-TYPE     78     43     39     38
D6V2, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                          11                            78
  CLUS_2                          17                            43
  CLUS_3                          15                            39
  CLUS_4                           9                            38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  6(4P16.3) MUTATED       13      2      8      0      2
  AMP PEAK  6(4P16.3) WILD-TYPE     24     27     26      5     17
D6V3, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                          13                            24
  CLUS_2                           2                            27
  CLUS_3                           8                            26
  CLUS_4                           0                             5
  CLUS_5                           2                            17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(4P16.3) MUTATED       14      3      6      2
  AMP PEAK  6(4P16.3) WILD-TYPE     28     35     20     16
D6V4, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                          14                            28
  CLUS_2                           3                            35
  CLUS_3                           6                            20
  CLUS_4                           2                            16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(4P16.3) MUTATED       33      7     13
  AMP PEAK  6(4P16.3) WILD-TYPE     85     65     60
D6V5, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                          33                            85
  CLUS_2                           7                            65
  CLUS_3                          13                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(4P16.3) MUTATED       29      1     12     11
  AMP PEAK  6(4P16.3) WILD-TYPE     67     43     52     48
D6V6, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                          29                            67
  CLUS_2                           1                            43
  CLUS_3                          12                            52
  CLUS_4                          11                            48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(4P16.3) MUTATED       17     27      9
  AMP PEAK  6(4P16.3) WILD-TYPE     46     88     76
D6V7, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                          17                            46
  CLUS_2                          27                            88
  CLUS_3                           9                            76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  6(4P16.3) MUTATED       15      5      7      2      3     10
  AMP PEAK  6(4P16.3) WILD-TYPE     29     19     24     32     44     26
                               vv
clus                            CLUS_7
  AMP PEAK  6(4P16.3) MUTATED       11
  AMP PEAK  6(4P16.3) WILD-TYPE     36
D6V8, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                          15                            29
  CLUS_2                           5                            19
  CLUS_3                           7                            24
  CLUS_4                           2                            32
  CLUS_5                           3                            44
  CLUS_6                          10                            26
  CLUS_7                          11                            36
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(4P16.3) MUTATED       14     13     26
  AMP PEAK  6(4P16.3) WILD-TYPE     33     99     78
D6V9, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                          14                            33
  CLUS_2                          13                            99
  CLUS_3                          26                            78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(4P16.3) MUTATED       15     19     19
  AMP PEAK  6(4P16.3) WILD-TYPE     28    113     69
D6V10, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                          15                            28
  CLUS_2                          19                           113
  CLUS_3                          19                            69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(7) Variable = AMP PEAK  7(4Q13.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4Q13.3) MUTATED       19      7     23
  AMP PEAK  7(4Q13.3) WILD-TYPE     48     89     78
D7V1, multiclass
        clus
vv       AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE
  CLUS_1                          19                            48
  CLUS_2                           7                            89
  CLUS_3                          23                            78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(4Q13.3) MUTATED       14     19     10      3
  AMP PEAK  7(4Q13.3) WILD-TYPE     75     41     44     44
D7V2, multiclass
        clus
vv       AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE
  CLUS_1                          14                            75
  CLUS_2                          19                            41
  CLUS_3                          10                            44
  CLUS_4                           3                            44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  7(4Q13.3) MUTATED        6      2      7      0      3
  AMP PEAK  7(4Q13.3) WILD-TYPE     31     27     27      5     16
D7V3, multiclass
        clus
vv       AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE
  CLUS_1                           6                            31
  CLUS_2                           2                            27
  CLUS_3                           7                            27
  CLUS_4                           0                             5
  CLUS_5                           3                            16
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(4Q13.3) MUTATED        6      4      4      4
  AMP PEAK  7(4Q13.3) WILD-TYPE     36     34     22     14
D7V4, multiclass
        clus
vv       AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE
  CLUS_1                           6                            36
  CLUS_2                           4                            34
  CLUS_3                           4                            22
  CLUS_4                           4                            14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4Q13.3) MUTATED       26     10     13
  AMP PEAK  7(4Q13.3) WILD-TYPE     92     62     60
D7V5, multiclass
        clus
vv       AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE
  CLUS_1                          26                            92
  CLUS_2                          10                            62
  CLUS_3                          13                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(4Q13.3) MUTATED       23      5     12      9
  AMP PEAK  7(4Q13.3) WILD-TYPE     73     39     52     50
D7V6, multiclass
        clus
vv       AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE
  CLUS_1                          23                            73
  CLUS_2                           5                            39
  CLUS_3                          12                            52
  CLUS_4                           9                            50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4Q13.3) MUTATED       15     21     13
  AMP PEAK  7(4Q13.3) WILD-TYPE     48     94     72
D7V7, multiclass
        clus
vv       AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE
  CLUS_1                          15                            48
  CLUS_2                          21                            94
  CLUS_3                          13                            72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  7(4Q13.3) MUTATED       12      5     11      5      6      5
  AMP PEAK  7(4Q13.3) WILD-TYPE     32     19     20     29     41     31
                               vv
clus                            CLUS_7
  AMP PEAK  7(4Q13.3) MUTATED        5
  AMP PEAK  7(4Q13.3) WILD-TYPE     42
D7V8, multiclass
        clus
vv       AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE
  CLUS_1                          12                            32
  CLUS_2                           5                            19
  CLUS_3                          11                            20
  CLUS_4                           5                            29
  CLUS_5                           6                            41
  CLUS_6                           5                            31
  CLUS_7                           5                            42
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4Q13.3) MUTATED       11     14     24
  AMP PEAK  7(4Q13.3) WILD-TYPE     36     98     80
D7V9, multiclass
        clus
vv       AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE
  CLUS_1                          11                            36
  CLUS_2                          14                            98
  CLUS_3                          24                            80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4Q13.3) MUTATED       12     18     19
  AMP PEAK  7(4Q13.3) WILD-TYPE     31    114     69
D7V10, multiclass
        clus
vv       AMP PEAK  7(4Q13.3) MUTATED AMP PEAK  7(4Q13.3) WILD-TYPE
  CLUS_1                          12                            31
  CLUS_2                          18                           114
  CLUS_3                          19                            69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(8) Variable = AMP PEAK  8(4Q31.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(4Q31.21) MUTATED       11      7     11
  AMP PEAK  8(4Q31.21) WILD-TYPE     56     89     90
D8V1, multiclass
        clus
vv       AMP PEAK  8(4Q31.21) MUTATED AMP PEAK  8(4Q31.21) WILD-TYPE
  CLUS_1                           11                             56
  CLUS_2                            7                             89
  CLUS_3                           11                             90
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(4Q31.21) MUTATED        7     11      4      5
  AMP PEAK  8(4Q31.21) WILD-TYPE     82     49     50     42
D8V2, multiclass
        clus
vv       AMP PEAK  8(4Q31.21) MUTATED AMP PEAK  8(4Q31.21) WILD-TYPE
  CLUS_1                            7                             82
  CLUS_2                           11                             49
  CLUS_3                            4                             50
  CLUS_4                            5                             42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  8(4Q31.21) MUTATED        3      1      6      1      0
  AMP PEAK  8(4Q31.21) WILD-TYPE     34     28     28      4     19
D8V3, multiclass
        clus
vv       AMP PEAK  8(4Q31.21) MUTATED AMP PEAK  8(4Q31.21) WILD-TYPE
  CLUS_1                            3                             34
  CLUS_2                            1                             28
  CLUS_3                            6                             28
  CLUS_4                            1                              4
  CLUS_5                            0                             19
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(4Q31.21) MUTATED        5      1      4      1
  AMP PEAK  8(4Q31.21) WILD-TYPE     37     37     22     17
D8V4, multiclass
        clus
vv       AMP PEAK  8(4Q31.21) MUTATED AMP PEAK  8(4Q31.21) WILD-TYPE
  CLUS_1                            5                             37
  CLUS_2                            1                             37
  CLUS_3                            4                             22
  CLUS_4                            1                             17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(4Q31.21) MUTATED       17      5      7
  AMP PEAK  8(4Q31.21) WILD-TYPE    101     67     66
D8V5, multiclass
        clus
vv       AMP PEAK  8(4Q31.21) MUTATED AMP PEAK  8(4Q31.21) WILD-TYPE
  CLUS_1                           17                            101
  CLUS_2                            5                             67
  CLUS_3                            7                             66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(4Q31.21) MUTATED       12      1      9      7
  AMP PEAK  8(4Q31.21) WILD-TYPE     84     43     55     52
D8V6, multiclass
        clus
vv       AMP PEAK  8(4Q31.21) MUTATED AMP PEAK  8(4Q31.21) WILD-TYPE
  CLUS_1                           12                             84
  CLUS_2                            1                             43
  CLUS_3                            9                             55
  CLUS_4                            7                             52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(4Q31.21) MUTATED       10     13      6
  AMP PEAK  8(4Q31.21) WILD-TYPE     53    102     79
D8V7, multiclass
        clus
vv       AMP PEAK  8(4Q31.21) MUTATED AMP PEAK  8(4Q31.21) WILD-TYPE
  CLUS_1                           10                             53
  CLUS_2                           13                            102
  CLUS_3                            6                             79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  8(4Q31.21) MUTATED        7      4      7      2      1      4
  AMP PEAK  8(4Q31.21) WILD-TYPE     37     20     24     32     46     32
                                vv
clus                             CLUS_7
  AMP PEAK  8(4Q31.21) MUTATED        4
  AMP PEAK  8(4Q31.21) WILD-TYPE     43
D8V8, multiclass
        clus
vv       AMP PEAK  8(4Q31.21) MUTATED AMP PEAK  8(4Q31.21) WILD-TYPE
  CLUS_1                            7                             37
  CLUS_2                            4                             20
  CLUS_3                            7                             24
  CLUS_4                            2                             32
  CLUS_5                            1                             46
  CLUS_6                            4                             32
  CLUS_7                            4                             43
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(4Q31.21) MUTATED        6     11     12
  AMP PEAK  8(4Q31.21) WILD-TYPE     41    101     92
D8V9, multiclass
        clus
vv       AMP PEAK  8(4Q31.21) MUTATED AMP PEAK  8(4Q31.21) WILD-TYPE
  CLUS_1                            6                             41
  CLUS_2                           11                            101
  CLUS_3                           12                             92
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(4Q31.21) MUTATED        6     11     12
  AMP PEAK  8(4Q31.21) WILD-TYPE     37    121     76
D8V10, multiclass
        clus
vv       AMP PEAK  8(4Q31.21) MUTATED AMP PEAK  8(4Q31.21) WILD-TYPE
  CLUS_1                            6                             37
  CLUS_2                           11                            121
  CLUS_3                           12                             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(9) Variable = AMP PEAK  9(5P15.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(5P15.33) MUTATED       51     36     44
  AMP PEAK  9(5P15.33) WILD-TYPE     16     60     57
D9V1, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           51                             16
  CLUS_2                           36                             60
  CLUS_3                           44                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(5P15.33) MUTATED       47     37     28     16
  AMP PEAK  9(5P15.33) WILD-TYPE     42     23     26     31
D9V2, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           47                             42
  CLUS_2                           37                             23
  CLUS_3                           28                             26
  CLUS_4                           16                             31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  9(5P15.33) MUTATED       18      8     18      0     12
  AMP PEAK  9(5P15.33) WILD-TYPE     19     21     16      5      7
D9V3, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           18                             19
  CLUS_2                            8                             21
  CLUS_3                           18                             16
  CLUS_4                            0                              5
  CLUS_5                           12                              7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(5P15.33) MUTATED       20     14     10     12
  AMP PEAK  9(5P15.33) WILD-TYPE     22     24     16      6
D9V4, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           20                             22
  CLUS_2                           14                             24
  CLUS_3                           10                             16
  CLUS_4                           12                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(5P15.33) MUTATED       59     32     40
  AMP PEAK  9(5P15.33) WILD-TYPE     59     40     33
D9V5, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           59                             59
  CLUS_2                           32                             40
  CLUS_3                           40                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(5P15.33) MUTATED       48     22     26     35
  AMP PEAK  9(5P15.33) WILD-TYPE     48     22     38     24
D9V6, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           48                             48
  CLUS_2                           22                             22
  CLUS_3                           26                             38
  CLUS_4                           35                             24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(5P15.33) MUTATED       40     46     44
  AMP PEAK  9(5P15.33) WILD-TYPE     23     69     41
D9V7, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           40                             23
  CLUS_2                           46                             69
  CLUS_3                           44                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  9(5P15.33) MUTATED       28     14     19     17     27     16
  AMP PEAK  9(5P15.33) WILD-TYPE     16     10     12     17     20     20
                                vv
clus                             CLUS_7
  AMP PEAK  9(5P15.33) MUTATED        9
  AMP PEAK  9(5P15.33) WILD-TYPE     38
D9V8, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           28                             16
  CLUS_2                           14                             10
  CLUS_3                           19                             12
  CLUS_4                           17                             17
  CLUS_5                           27                             20
  CLUS_6                           16                             20
  CLUS_7                            9                             38
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(5P15.33) MUTATED       28     56     46
  AMP PEAK  9(5P15.33) WILD-TYPE     19     56     58
D9V9, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           28                             19
  CLUS_2                           56                             56
  CLUS_3                           46                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(5P15.33) MUTATED       29     68     33
  AMP PEAK  9(5P15.33) WILD-TYPE     14     64     55
D9V10, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           29                             14
  CLUS_2                           68                             64
  CLUS_3                           33                             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(10) Variable = AMP PEAK 10(6P22.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6P22.3) MUTATED       52     32     27
  AMP PEAK 10(6P22.3) WILD-TYPE     15     64     74
D10V1, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          52                            15
  CLUS_2                          32                            64
  CLUS_3                          27                            74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6P22.3) MUTATED       37     38     18     14
  AMP PEAK 10(6P22.3) WILD-TYPE     52     22     36     33
D10V2, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          37                            52
  CLUS_2                          38                            22
  CLUS_3                          18                            36
  CLUS_4                          14                            33
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 10(6P22.3) MUTATED       16      9     14      0      9
  AMP PEAK 10(6P22.3) WILD-TYPE     21     20     20      5     10
D10V3, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          16                            21
  CLUS_2                           9                            20
  CLUS_3                          14                            20
  CLUS_4                           0                             5
  CLUS_5                           9                            10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6P22.3) MUTATED       15     14      9     10
  AMP PEAK 10(6P22.3) WILD-TYPE     27     24     17      8
D10V4, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          15                            27
  CLUS_2                          14                            24
  CLUS_3                           9                            17
  CLUS_4                          10                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6P22.3) MUTATED       52     31     28
  AMP PEAK 10(6P22.3) WILD-TYPE     66     41     45
D10V5, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          52                            66
  CLUS_2                          31                            41
  CLUS_3                          28                            45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6P22.3) MUTATED       43     20     25     23
  AMP PEAK 10(6P22.3) WILD-TYPE     53     24     39     36
D10V6, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          43                            53
  CLUS_2                          20                            24
  CLUS_3                          25                            39
  CLUS_4                          23                            36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6P22.3) MUTATED       32     46     33
  AMP PEAK 10(6P22.3) WILD-TYPE     31     69     52
D10V7, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          32                            31
  CLUS_2                          46                            69
  CLUS_3                          33                            52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 10(6P22.3) MUTATED       24      8     17     11     21     15
  AMP PEAK 10(6P22.3) WILD-TYPE     20     16     14     23     26     21
                               vv
clus                            CLUS_7
  AMP PEAK 10(6P22.3) MUTATED       15
  AMP PEAK 10(6P22.3) WILD-TYPE     32
D10V8, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          24                            20
  CLUS_2                           8                            16
  CLUS_3                          17                            14
  CLUS_4                          11                            23
  CLUS_5                          21                            26
  CLUS_6                          15                            21
  CLUS_7                          15                            32
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6P22.3) MUTATED       23     42     46
  AMP PEAK 10(6P22.3) WILD-TYPE     24     70     58
D10V9, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          23                            24
  CLUS_2                          42                            70
  CLUS_3                          46                            58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6P22.3) MUTATED       24     50     37
  AMP PEAK 10(6P22.3) WILD-TYPE     19     82     51
D10V10, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          24                            19
  CLUS_2                          50                            82
  CLUS_3                          37                            51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(11) Variable = AMP PEAK 11(6Q21) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(6Q21) MUTATED       10      9      4
  AMP PEAK 11(6Q21) WILD-TYPE     57     87     97
D11V1, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        10                          57
  CLUS_2                         9                          87
  CLUS_3                         4                          97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(6Q21) MUTATED        6     10      2      5
  AMP PEAK 11(6Q21) WILD-TYPE     83     50     52     42
D11V2, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         6                          83
  CLUS_2                        10                          50
  CLUS_3                         2                          52
  CLUS_4                         5                          42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 11(6Q21) MUTATED        6      1      3      0      2
  AMP PEAK 11(6Q21) WILD-TYPE     31     28     31      5     17
D11V3, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         6                          31
  CLUS_2                         1                          28
  CLUS_3                         3                          31
  CLUS_4                         0                           5
  CLUS_5                         2                          17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(6Q21) MUTATED        3      1      5      3
  AMP PEAK 11(6Q21) WILD-TYPE     39     37     21     15
D11V4, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         3                          39
  CLUS_2                         1                          37
  CLUS_3                         5                          21
  CLUS_4                         3                          15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(6Q21) MUTATED       11      8      4
  AMP PEAK 11(6Q21) WILD-TYPE    107     64     69
D11V5, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        11                         107
  CLUS_2                         8                          64
  CLUS_3                         4                          69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(6Q21) MUTATED       11      4      5      3
  AMP PEAK 11(6Q21) WILD-TYPE     85     40     59     56
D11V6, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        11                          85
  CLUS_2                         4                          40
  CLUS_3                         5                          59
  CLUS_4                         3                          56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(6Q21) MUTATED        5      9      9
  AMP PEAK 11(6Q21) WILD-TYPE     58    106     76
D11V7, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         5                          58
  CLUS_2                         9                         106
  CLUS_3                         9                          76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 11(6Q21) MUTATED        3      2      1      7      4      1      5
  AMP PEAK 11(6Q21) WILD-TYPE     41     22     30     27     43     35     42
D11V8, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         3                          41
  CLUS_2                         2                          22
  CLUS_3                         1                          30
  CLUS_4                         7                          27
  CLUS_5                         4                          43
  CLUS_6                         1                          35
  CLUS_7                         5                          42
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(6Q21) MUTATED        3      9     11
  AMP PEAK 11(6Q21) WILD-TYPE     44    103     93
D11V9, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         3                          44
  CLUS_2                         9                         103
  CLUS_3                        11                          93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(6Q21) MUTATED        3     11      9
  AMP PEAK 11(6Q21) WILD-TYPE     40    121     79
D11V10, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                         3                          40
  CLUS_2                        11                         121
  CLUS_3                         9                          79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(12) Variable = AMP PEAK 12(7P21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7P21.1) MUTATED       46     34     54
  AMP PEAK 12(7P21.1) WILD-TYPE     21     62     47
D12V1, multiclass
        clus
vv       AMP PEAK 12(7P21.1) MUTATED AMP PEAK 12(7P21.1) WILD-TYPE
  CLUS_1                          46                            21
  CLUS_2                          34                            62
  CLUS_3                          54                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7P21.1) MUTATED       46     41     25     18
  AMP PEAK 12(7P21.1) WILD-TYPE     43     19     29     29
D12V2, multiclass
        clus
vv       AMP PEAK 12(7P21.1) MUTATED AMP PEAK 12(7P21.1) WILD-TYPE
  CLUS_1                          46                            43
  CLUS_2                          41                            19
  CLUS_3                          25                            29
  CLUS_4                          18                            29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 12(7P21.1) MUTATED       20     11     22      1      8
  AMP PEAK 12(7P21.1) WILD-TYPE     17     18     12      4     11
D12V3, multiclass
        clus
vv       AMP PEAK 12(7P21.1) MUTATED AMP PEAK 12(7P21.1) WILD-TYPE
  CLUS_1                          20                            17
  CLUS_2                          11                            18
  CLUS_3                          22                            12
  CLUS_4                           1                             4
  CLUS_5                           8                            11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7P21.1) MUTATED       19     16     16     11
  AMP PEAK 12(7P21.1) WILD-TYPE     23     22     10      7
D12V4, multiclass
        clus
vv       AMP PEAK 12(7P21.1) MUTATED AMP PEAK 12(7P21.1) WILD-TYPE
  CLUS_1                          19                            23
  CLUS_2                          16                            22
  CLUS_3                          16                            10
  CLUS_4                          11                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7P21.1) MUTATED       59     36     39
  AMP PEAK 12(7P21.1) WILD-TYPE     59     36     34
D12V5, multiclass
        clus
vv       AMP PEAK 12(7P21.1) MUTATED AMP PEAK 12(7P21.1) WILD-TYPE
  CLUS_1                          59                            59
  CLUS_2                          36                            36
  CLUS_3                          39                            34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7P21.1) MUTATED       46     24     34     30
  AMP PEAK 12(7P21.1) WILD-TYPE     50     20     30     29
D12V6, multiclass
        clus
vv       AMP PEAK 12(7P21.1) MUTATED AMP PEAK 12(7P21.1) WILD-TYPE
  CLUS_1                          46                            50
  CLUS_2                          24                            20
  CLUS_3                          34                            30
  CLUS_4                          30                            29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7P21.1) MUTATED       38     53     42
  AMP PEAK 12(7P21.1) WILD-TYPE     25     62     43
D12V7, multiclass
        clus
vv       AMP PEAK 12(7P21.1) MUTATED AMP PEAK 12(7P21.1) WILD-TYPE
  CLUS_1                          38                            25
  CLUS_2                          53                            62
  CLUS_3                          42                            43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 12(7P21.1) MUTATED       26     16     19     18     21     17
  AMP PEAK 12(7P21.1) WILD-TYPE     18      8     12     16     26     19
                               vv
clus                            CLUS_7
  AMP PEAK 12(7P21.1) MUTATED       16
  AMP PEAK 12(7P21.1) WILD-TYPE     31
D12V8, multiclass
        clus
vv       AMP PEAK 12(7P21.1) MUTATED AMP PEAK 12(7P21.1) WILD-TYPE
  CLUS_1                          26                            18
  CLUS_2                          16                             8
  CLUS_3                          19                            12
  CLUS_4                          18                            16
  CLUS_5                          21                            26
  CLUS_6                          17                            19
  CLUS_7                          16                            31
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7P21.1) MUTATED       26     57     50
  AMP PEAK 12(7P21.1) WILD-TYPE     21     55     54
D12V9, multiclass
        clus
vv       AMP PEAK 12(7P21.1) MUTATED AMP PEAK 12(7P21.1) WILD-TYPE
  CLUS_1                          26                            21
  CLUS_2                          57                            55
  CLUS_3                          50                            54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7P21.1) MUTATED       25     67     41
  AMP PEAK 12(7P21.1) WILD-TYPE     18     65     47
D12V10, multiclass
        clus
vv       AMP PEAK 12(7P21.1) MUTATED AMP PEAK 12(7P21.1) WILD-TYPE
  CLUS_1                          25                            18
  CLUS_2                          67                            65
  CLUS_3                          41                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(13) Variable = AMP PEAK 13(7P11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(7P11.2) MUTATED       48     28     55
  AMP PEAK 13(7P11.2) WILD-TYPE     19     68     46
D13V1, multiclass
        clus
vv       AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE
  CLUS_1                          48                            19
  CLUS_2                          28                            68
  CLUS_3                          55                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(7P11.2) MUTATED       46     40     23     18
  AMP PEAK 13(7P11.2) WILD-TYPE     43     20     31     29
D13V2, multiclass
        clus
vv       AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE
  CLUS_1                          46                            43
  CLUS_2                          40                            20
  CLUS_3                          23                            31
  CLUS_4                          18                            29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 13(7P11.2) MUTATED       22     12     22      1      7
  AMP PEAK 13(7P11.2) WILD-TYPE     15     17     12      4     12
D13V3, multiclass
        clus
vv       AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE
  CLUS_1                          22                            15
  CLUS_2                          12                            17
  CLUS_3                          22                            12
  CLUS_4                           1                             4
  CLUS_5                           7                            12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(7P11.2) MUTATED       21     17     16     10
  AMP PEAK 13(7P11.2) WILD-TYPE     21     21     10      8
D13V4, multiclass
        clus
vv       AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE
  CLUS_1                          21                            21
  CLUS_2                          17                            21
  CLUS_3                          16                            10
  CLUS_4                          10                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(7P11.2) MUTATED       58     36     37
  AMP PEAK 13(7P11.2) WILD-TYPE     60     36     36
D13V5, multiclass
        clus
vv       AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE
  CLUS_1                          58                            60
  CLUS_2                          36                            36
  CLUS_3                          37                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(7P11.2) MUTATED       45     26     33     27
  AMP PEAK 13(7P11.2) WILD-TYPE     51     18     31     32
D13V6, multiclass
        clus
vv       AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE
  CLUS_1                          45                            51
  CLUS_2                          26                            18
  CLUS_3                          33                            31
  CLUS_4                          27                            32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(7P11.2) MUTATED       35     52     43
  AMP PEAK 13(7P11.2) WILD-TYPE     28     63     42
D13V7, multiclass
        clus
vv       AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE
  CLUS_1                          35                            28
  CLUS_2                          52                            63
  CLUS_3                          43                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 13(7P11.2) MUTATED       25     13     19     18     21     18
  AMP PEAK 13(7P11.2) WILD-TYPE     19     11     12     16     26     18
                               vv
clus                            CLUS_7
  AMP PEAK 13(7P11.2) MUTATED       16
  AMP PEAK 13(7P11.2) WILD-TYPE     31
D13V8, multiclass
        clus
vv       AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE
  CLUS_1                          25                            19
  CLUS_2                          13                            11
  CLUS_3                          19                            12
  CLUS_4                          18                            16
  CLUS_5                          21                            26
  CLUS_6                          18                            18
  CLUS_7                          16                            31
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(7P11.2) MUTATED       26     55     49
  AMP PEAK 13(7P11.2) WILD-TYPE     21     57     55
D13V9, multiclass
        clus
vv       AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE
  CLUS_1                          26                            21
  CLUS_2                          55                            57
  CLUS_3                          49                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(7P11.2) MUTATED       24     66     40
  AMP PEAK 13(7P11.2) WILD-TYPE     19     66     48
D13V10, multiclass
        clus
vv       AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE
  CLUS_1                          24                            19
  CLUS_2                          66                            66
  CLUS_3                          40                            48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(14) Variable = AMP PEAK 14(8P11.23) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.23) MUTATED       27      7     50
  AMP PEAK 14(8P11.23) WILD-TYPE     40     89     51
D14V1, multiclass
        clus
vv       AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE
  CLUS_1                           27                             40
  CLUS_2                            7                             89
  CLUS_3                           50                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(8P11.23) MUTATED       25     21     22      9
  AMP PEAK 14(8P11.23) WILD-TYPE     64     39     32     38
D14V2, multiclass
        clus
vv       AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE
  CLUS_1                           25                             64
  CLUS_2                           21                             39
  CLUS_3                           22                             32
  CLUS_4                            9                             38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 14(8P11.23) MUTATED       13     10     13      1      4
  AMP PEAK 14(8P11.23) WILD-TYPE     24     19     21      4     15
D14V3, multiclass
        clus
vv       AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE
  CLUS_1                           13                             24
  CLUS_2                           10                             19
  CLUS_3                           13                             21
  CLUS_4                            1                              4
  CLUS_5                            4                             15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(8P11.23) MUTATED       15     13      9      4
  AMP PEAK 14(8P11.23) WILD-TYPE     27     25     17     14
D14V4, multiclass
        clus
vv       AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE
  CLUS_1                           15                             27
  CLUS_2                           13                             25
  CLUS_3                            9                             17
  CLUS_4                            4                             14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.23) MUTATED       38     23     23
  AMP PEAK 14(8P11.23) WILD-TYPE     80     49     50
D14V5, multiclass
        clus
vv       AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE
  CLUS_1                           38                             80
  CLUS_2                           23                             49
  CLUS_3                           23                             50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(8P11.23) MUTATED       30     15     23     16
  AMP PEAK 14(8P11.23) WILD-TYPE     66     29     41     43
D14V6, multiclass
        clus
vv       AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE
  CLUS_1                           30                             66
  CLUS_2                           15                             29
  CLUS_3                           23                             41
  CLUS_4                           16                             43
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.23) MUTATED       21     41     21
  AMP PEAK 14(8P11.23) WILD-TYPE     42     74     64
D14V7, multiclass
        clus
vv       AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE
  CLUS_1                           21                             42
  CLUS_2                           41                             74
  CLUS_3                           21                             64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 14(8P11.23) MUTATED       15      8     14     12     11     10
  AMP PEAK 14(8P11.23) WILD-TYPE     29     16     17     22     36     26
                                vv
clus                             CLUS_7
  AMP PEAK 14(8P11.23) MUTATED       13
  AMP PEAK 14(8P11.23) WILD-TYPE     34
D14V8, multiclass
        clus
vv       AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE
  CLUS_1                           15                             29
  CLUS_2                            8                             16
  CLUS_3                           14                             17
  CLUS_4                           12                             22
  CLUS_5                           11                             36
  CLUS_6                           10                             26
  CLUS_7                           13                             34
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.23) MUTATED       16     27     40
  AMP PEAK 14(8P11.23) WILD-TYPE     31     85     64
D14V9, multiclass
        clus
vv       AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE
  CLUS_1                           16                             31
  CLUS_2                           27                             85
  CLUS_3                           40                             64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.23) MUTATED       14     37     32
  AMP PEAK 14(8P11.23) WILD-TYPE     29     95     56
D14V10, multiclass
        clus
vv       AMP PEAK 14(8P11.23) MUTATED AMP PEAK 14(8P11.23) WILD-TYPE
  CLUS_1                           14                             29
  CLUS_2                           37                             95
  CLUS_3                           32                             56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(15) Variable = AMP PEAK 15(8P11.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8P11.21) MUTATED       29      8     49
  AMP PEAK 15(8P11.21) WILD-TYPE     38     88     52
D15V1, multiclass
        clus
vv       AMP PEAK 15(8P11.21) MUTATED AMP PEAK 15(8P11.21) WILD-TYPE
  CLUS_1                           29                             38
  CLUS_2                            8                             88
  CLUS_3                           49                             52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(8P11.21) MUTATED       25     22     23      8
  AMP PEAK 15(8P11.21) WILD-TYPE     64     38     31     39
D15V2, multiclass
        clus
vv       AMP PEAK 15(8P11.21) MUTATED AMP PEAK 15(8P11.21) WILD-TYPE
  CLUS_1                           25                             64
  CLUS_2                           22                             38
  CLUS_3                           23                             31
  CLUS_4                            8                             39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 15(8P11.21) MUTATED       12      7     12      1      6
  AMP PEAK 15(8P11.21) WILD-TYPE     25     22     22      4     13
D15V3, multiclass
        clus
vv       AMP PEAK 15(8P11.21) MUTATED AMP PEAK 15(8P11.21) WILD-TYPE
  CLUS_1                           12                             25
  CLUS_2                            7                             22
  CLUS_3                           12                             22
  CLUS_4                            1                              4
  CLUS_5                            6                             13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(8P11.21) MUTATED       12     13      8      5
  AMP PEAK 15(8P11.21) WILD-TYPE     30     25     18     13
D15V4, multiclass
        clus
vv       AMP PEAK 15(8P11.21) MUTATED AMP PEAK 15(8P11.21) WILD-TYPE
  CLUS_1                           12                             30
  CLUS_2                           13                             25
  CLUS_3                            8                             18
  CLUS_4                            5                             13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8P11.21) MUTATED       43     21     22
  AMP PEAK 15(8P11.21) WILD-TYPE     75     51     51
D15V5, multiclass
        clus
vv       AMP PEAK 15(8P11.21) MUTATED AMP PEAK 15(8P11.21) WILD-TYPE
  CLUS_1                           43                             75
  CLUS_2                           21                             51
  CLUS_3                           22                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(8P11.21) MUTATED       36     16     19     15
  AMP PEAK 15(8P11.21) WILD-TYPE     60     28     45     44
D15V6, multiclass
        clus
vv       AMP PEAK 15(8P11.21) MUTATED AMP PEAK 15(8P11.21) WILD-TYPE
  CLUS_1                           36                             60
  CLUS_2                           16                             28
  CLUS_3                           19                             45
  CLUS_4                           15                             44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8P11.21) MUTATED       20     46     19
  AMP PEAK 15(8P11.21) WILD-TYPE     43     69     66
D15V7, multiclass
        clus
vv       AMP PEAK 15(8P11.21) MUTATED AMP PEAK 15(8P11.21) WILD-TYPE
  CLUS_1                           20                             43
  CLUS_2                           46                             69
  CLUS_3                           19                             66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 15(8P11.21) MUTATED       15      7     21     10      9     11
  AMP PEAK 15(8P11.21) WILD-TYPE     29     17     10     24     38     25
                                vv
clus                             CLUS_7
  AMP PEAK 15(8P11.21) MUTATED       12
  AMP PEAK 15(8P11.21) WILD-TYPE     35
D15V8, multiclass
        clus
vv       AMP PEAK 15(8P11.21) MUTATED AMP PEAK 15(8P11.21) WILD-TYPE
  CLUS_1                           15                             29
  CLUS_2                            7                             17
  CLUS_3                           21                             10
  CLUS_4                           10                             24
  CLUS_5                            9                             38
  CLUS_6                           11                             25
  CLUS_7                           12                             35
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8P11.21) MUTATED       17     26     42
  AMP PEAK 15(8P11.21) WILD-TYPE     30     86     62
D15V9, multiclass
        clus
vv       AMP PEAK 15(8P11.21) MUTATED AMP PEAK 15(8P11.21) WILD-TYPE
  CLUS_1                           17                             30
  CLUS_2                           26                             86
  CLUS_3                           42                             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8P11.21) MUTATED       14     33     38
  AMP PEAK 15(8P11.21) WILD-TYPE     29     99     50
D15V10, multiclass
        clus
vv       AMP PEAK 15(8P11.21) MUTATED AMP PEAK 15(8P11.21) WILD-TYPE
  CLUS_1                           14                             29
  CLUS_2                           33                             99
  CLUS_3                           38                             50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(16) Variable = AMP PEAK 16(8Q22.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8Q22.3) MUTATED       54     41     74
  AMP PEAK 16(8Q22.3) WILD-TYPE     13     55     27
D16V1, multiclass
        clus
vv       AMP PEAK 16(8Q22.3) MUTATED AMP PEAK 16(8Q22.3) WILD-TYPE
  CLUS_1                          54                            13
  CLUS_2                          41                            55
  CLUS_3                          74                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(8Q22.3) MUTATED       53     50     35     22
  AMP PEAK 16(8Q22.3) WILD-TYPE     36     10     19     25
D16V2, multiclass
        clus
vv       AMP PEAK 16(8Q22.3) MUTATED AMP PEAK 16(8Q22.3) WILD-TYPE
  CLUS_1                          53                            36
  CLUS_2                          50                            10
  CLUS_3                          35                            19
  CLUS_4                          22                            25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 16(8Q22.3) MUTATED       22     11     26      4     13
  AMP PEAK 16(8Q22.3) WILD-TYPE     15     18      8      1      6
D16V3, multiclass
        clus
vv       AMP PEAK 16(8Q22.3) MUTATED AMP PEAK 16(8Q22.3) WILD-TYPE
  CLUS_1                          22                            15
  CLUS_2                          11                            18
  CLUS_3                          26                             8
  CLUS_4                           4                             1
  CLUS_5                          13                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(8Q22.3) MUTATED       26     19     20     11
  AMP PEAK 16(8Q22.3) WILD-TYPE     16     19      6      7
D16V4, multiclass
        clus
vv       AMP PEAK 16(8Q22.3) MUTATED AMP PEAK 16(8Q22.3) WILD-TYPE
  CLUS_1                          26                            16
  CLUS_2                          19                            19
  CLUS_3                          20                             6
  CLUS_4                          11                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8Q22.3) MUTATED       79     45     44
  AMP PEAK 16(8Q22.3) WILD-TYPE     39     27     29
D16V5, multiclass
        clus
vv       AMP PEAK 16(8Q22.3) MUTATED AMP PEAK 16(8Q22.3) WILD-TYPE
  CLUS_1                          79                            39
  CLUS_2                          45                            27
  CLUS_3                          44                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(8Q22.3) MUTATED       64     27     43     34
  AMP PEAK 16(8Q22.3) WILD-TYPE     32     17     21     25
D16V6, multiclass
        clus
vv       AMP PEAK 16(8Q22.3) MUTATED AMP PEAK 16(8Q22.3) WILD-TYPE
  CLUS_1                          64                            32
  CLUS_2                          27                            17
  CLUS_3                          43                            21
  CLUS_4                          34                            25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8Q22.3) MUTATED       46     75     47
  AMP PEAK 16(8Q22.3) WILD-TYPE     17     40     38
D16V7, multiclass
        clus
vv       AMP PEAK 16(8Q22.3) MUTATED AMP PEAK 16(8Q22.3) WILD-TYPE
  CLUS_1                          46                            17
  CLUS_2                          75                            40
  CLUS_3                          47                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 16(8Q22.3) MUTATED       34     17     27     22     23     24
  AMP PEAK 16(8Q22.3) WILD-TYPE     10      7      4     12     24     12
                               vv
clus                            CLUS_7
  AMP PEAK 16(8Q22.3) MUTATED       21
  AMP PEAK 16(8Q22.3) WILD-TYPE     26
D16V8, multiclass
        clus
vv       AMP PEAK 16(8Q22.3) MUTATED AMP PEAK 16(8Q22.3) WILD-TYPE
  CLUS_1                          34                            10
  CLUS_2                          17                             7
  CLUS_3                          27                             4
  CLUS_4                          22                            12
  CLUS_5                          23                            24
  CLUS_6                          24                            12
  CLUS_7                          21                            26
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8Q22.3) MUTATED       38     65     65
  AMP PEAK 16(8Q22.3) WILD-TYPE      9     47     39
D16V9, multiclass
        clus
vv       AMP PEAK 16(8Q22.3) MUTATED AMP PEAK 16(8Q22.3) WILD-TYPE
  CLUS_1                          38                             9
  CLUS_2                          65                            47
  CLUS_3                          65                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8Q22.3) MUTATED       33     78     57
  AMP PEAK 16(8Q22.3) WILD-TYPE     10     54     31
D16V10, multiclass
        clus
vv       AMP PEAK 16(8Q22.3) MUTATED AMP PEAK 16(8Q22.3) WILD-TYPE
  CLUS_1                          33                            10
  CLUS_2                          78                            54
  CLUS_3                          57                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(17) Variable = AMP PEAK 17(9P24.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9P24.1) MUTATED       21     26      6
  AMP PEAK 17(9P24.1) WILD-TYPE     46     70     95
D17V1, multiclass
        clus
vv       AMP PEAK 17(9P24.1) MUTATED AMP PEAK 17(9P24.1) WILD-TYPE
  CLUS_1                          21                            46
  CLUS_2                          26                            70
  CLUS_3                           6                            95
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(9P24.1) MUTATED       22      9     12      6
  AMP PEAK 17(9P24.1) WILD-TYPE     67     51     42     41
D17V2, multiclass
        clus
vv       AMP PEAK 17(9P24.1) MUTATED AMP PEAK 17(9P24.1) WILD-TYPE
  CLUS_1                          22                            67
  CLUS_2                           9                            51
  CLUS_3                          12                            42
  CLUS_4                           6                            41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 17(9P24.1) MUTATED        7      6     10      0      5
  AMP PEAK 17(9P24.1) WILD-TYPE     30     23     24      5     14
D17V3, multiclass
        clus
vv       AMP PEAK 17(9P24.1) MUTATED AMP PEAK 17(9P24.1) WILD-TYPE
  CLUS_1                           7                            30
  CLUS_2                           6                            23
  CLUS_3                          10                            24
  CLUS_4                           0                             5
  CLUS_5                           5                            14
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(9P24.1) MUTATED        7      7      8      6
  AMP PEAK 17(9P24.1) WILD-TYPE     35     31     18     12
D17V4, multiclass
        clus
vv       AMP PEAK 17(9P24.1) MUTATED AMP PEAK 17(9P24.1) WILD-TYPE
  CLUS_1                           7                            35
  CLUS_2                           7                            31
  CLUS_3                           8                            18
  CLUS_4                           6                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9P24.1) MUTATED       20     14     19
  AMP PEAK 17(9P24.1) WILD-TYPE     98     58     54
D17V5, multiclass
        clus
vv       AMP PEAK 17(9P24.1) MUTATED AMP PEAK 17(9P24.1) WILD-TYPE
  CLUS_1                          20                            98
  CLUS_2                          14                            58
  CLUS_3                          19                            54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(9P24.1) MUTATED       17     14      8     14
  AMP PEAK 17(9P24.1) WILD-TYPE     79     30     56     45
D17V6, multiclass
        clus
vv       AMP PEAK 17(9P24.1) MUTATED AMP PEAK 17(9P24.1) WILD-TYPE
  CLUS_1                          17                            79
  CLUS_2                          14                            30
  CLUS_3                           8                            56
  CLUS_4                          14                            45
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9P24.1) MUTATED       13     24     16
  AMP PEAK 17(9P24.1) WILD-TYPE     50     91     69
D17V7, multiclass
        clus
vv       AMP PEAK 17(9P24.1) MUTATED AMP PEAK 17(9P24.1) WILD-TYPE
  CLUS_1                          13                            50
  CLUS_2                          24                            91
  CLUS_3                          16                            69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 17(9P24.1) MUTATED        7      8      8      4     10     12
  AMP PEAK 17(9P24.1) WILD-TYPE     37     16     23     30     37     24
                               vv
clus                            CLUS_7
  AMP PEAK 17(9P24.1) MUTATED        4
  AMP PEAK 17(9P24.1) WILD-TYPE     43
D17V8, multiclass
        clus
vv       AMP PEAK 17(9P24.1) MUTATED AMP PEAK 17(9P24.1) WILD-TYPE
  CLUS_1                           7                            37
  CLUS_2                           8                            16
  CLUS_3                           8                            23
  CLUS_4                           4                            30
  CLUS_5                          10                            37
  CLUS_6                          12                            24
  CLUS_7                           4                            43
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9P24.1) MUTATED       10     24     19
  AMP PEAK 17(9P24.1) WILD-TYPE     37     88     85
D17V9, multiclass
        clus
vv       AMP PEAK 17(9P24.1) MUTATED AMP PEAK 17(9P24.1) WILD-TYPE
  CLUS_1                          10                            37
  CLUS_2                          24                            88
  CLUS_3                          19                            85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9P24.1) MUTATED        7     32     14
  AMP PEAK 17(9P24.1) WILD-TYPE     36    100     74
D17V10, multiclass
        clus
vv       AMP PEAK 17(9P24.1) MUTATED AMP PEAK 17(9P24.1) WILD-TYPE
  CLUS_1                           7                            36
  CLUS_2                          32                           100
  CLUS_3                          14                            74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(18) Variable = AMP PEAK 18(10P14) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(10P14) MUTATED       50     28     38
  AMP PEAK 18(10P14) WILD-TYPE     17     68     63
D18V1, multiclass
        clus
vv       AMP PEAK 18(10P14) MUTATED AMP PEAK 18(10P14) WILD-TYPE
  CLUS_1                         50                           17
  CLUS_2                         28                           68
  CLUS_3                         38                           63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(10P14) MUTATED       32     45     17     18
  AMP PEAK 18(10P14) WILD-TYPE     57     15     37     29
D18V2, multiclass
        clus
vv       AMP PEAK 18(10P14) MUTATED AMP PEAK 18(10P14) WILD-TYPE
  CLUS_1                         32                           57
  CLUS_2                         45                           15
  CLUS_3                         17                           37
  CLUS_4                         18                           29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 18(10P14) MUTATED       19      9     14      1     10
  AMP PEAK 18(10P14) WILD-TYPE     18     20     20      4      9
D18V3, multiclass
        clus
vv       AMP PEAK 18(10P14) MUTATED AMP PEAK 18(10P14) WILD-TYPE
  CLUS_1                         19                           18
  CLUS_2                          9                           20
  CLUS_3                         14                           20
  CLUS_4                          1                            4
  CLUS_5                         10                            9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(10P14) MUTATED       22     14      9      8
  AMP PEAK 18(10P14) WILD-TYPE     20     24     17     10
D18V4, multiclass
        clus
vv       AMP PEAK 18(10P14) MUTATED AMP PEAK 18(10P14) WILD-TYPE
  CLUS_1                         22                           20
  CLUS_2                         14                           24
  CLUS_3                          9                           17
  CLUS_4                          8                           10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(10P14) MUTATED       55     33     28
  AMP PEAK 18(10P14) WILD-TYPE     63     39     45
D18V5, multiclass
        clus
vv       AMP PEAK 18(10P14) MUTATED AMP PEAK 18(10P14) WILD-TYPE
  CLUS_1                         55                           63
  CLUS_2                         33                           39
  CLUS_3                         28                           45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(10P14) MUTATED       42     17     36     21
  AMP PEAK 18(10P14) WILD-TYPE     54     27     28     38
D18V6, multiclass
        clus
vv       AMP PEAK 18(10P14) MUTATED AMP PEAK 18(10P14) WILD-TYPE
  CLUS_1                         42                           54
  CLUS_2                         17                           27
  CLUS_3                         36                           28
  CLUS_4                         21                           38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(10P14) MUTATED       32     47     37
  AMP PEAK 18(10P14) WILD-TYPE     31     68     48
D18V7, multiclass
        clus
vv       AMP PEAK 18(10P14) MUTATED AMP PEAK 18(10P14) WILD-TYPE
  CLUS_1                         32                           31
  CLUS_2                         47                           68
  CLUS_3                         37                           48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 18(10P14) MUTATED       24     11     18     16     20     11     16
  AMP PEAK 18(10P14) WILD-TYPE     20     13     13     18     27     25     31
D18V8, multiclass
        clus
vv       AMP PEAK 18(10P14) MUTATED AMP PEAK 18(10P14) WILD-TYPE
  CLUS_1                         24                           20
  CLUS_2                         11                           13
  CLUS_3                         18                           13
  CLUS_4                         16                           18
  CLUS_5                         20                           27
  CLUS_6                         11                           25
  CLUS_7                         16                           31
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(10P14) MUTATED       25     47     44
  AMP PEAK 18(10P14) WILD-TYPE     22     65     60
D18V9, multiclass
        clus
vv       AMP PEAK 18(10P14) MUTATED AMP PEAK 18(10P14) WILD-TYPE
  CLUS_1                         25                           22
  CLUS_2                         47                           65
  CLUS_3                         44                           60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(10P14) MUTATED       24     54     38
  AMP PEAK 18(10P14) WILD-TYPE     19     78     50
D18V10, multiclass
        clus
vv       AMP PEAK 18(10P14) MUTATED AMP PEAK 18(10P14) WILD-TYPE
  CLUS_1                         24                           19
  CLUS_2                         54                           78
  CLUS_3                         38                           50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(19) Variable = AMP PEAK 19(11Q13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11Q13.3) MUTATED       31     20     50
  AMP PEAK 19(11Q13.3) WILD-TYPE     36     76     51
D19V1, multiclass
        clus
vv       AMP PEAK 19(11Q13.3) MUTATED AMP PEAK 19(11Q13.3) WILD-TYPE
  CLUS_1                           31                             36
  CLUS_2                           20                             76
  CLUS_3                           50                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(11Q13.3) MUTATED       35     27     20     13
  AMP PEAK 19(11Q13.3) WILD-TYPE     54     33     34     34
D19V2, multiclass
        clus
vv       AMP PEAK 19(11Q13.3) MUTATED AMP PEAK 19(11Q13.3) WILD-TYPE
  CLUS_1                           35                             54
  CLUS_2                           27                             33
  CLUS_3                           20                             34
  CLUS_4                           13                             34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 19(11Q13.3) MUTATED       17      7     16      1      9
  AMP PEAK 19(11Q13.3) WILD-TYPE     20     22     18      4     10
D19V3, multiclass
        clus
vv       AMP PEAK 19(11Q13.3) MUTATED AMP PEAK 19(11Q13.3) WILD-TYPE
  CLUS_1                           17                             20
  CLUS_2                            7                             22
  CLUS_3                           16                             18
  CLUS_4                            1                              4
  CLUS_5                            9                             10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(11Q13.3) MUTATED       19     10     10     11
  AMP PEAK 19(11Q13.3) WILD-TYPE     23     28     16      7
D19V4, multiclass
        clus
vv       AMP PEAK 19(11Q13.3) MUTATED AMP PEAK 19(11Q13.3) WILD-TYPE
  CLUS_1                           19                             23
  CLUS_2                           10                             28
  CLUS_3                           10                             16
  CLUS_4                           11                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11Q13.3) MUTATED       48     21     31
  AMP PEAK 19(11Q13.3) WILD-TYPE     70     51     42
D19V5, multiclass
        clus
vv       AMP PEAK 19(11Q13.3) MUTATED AMP PEAK 19(11Q13.3) WILD-TYPE
  CLUS_1                           48                             70
  CLUS_2                           21                             51
  CLUS_3                           31                             42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(11Q13.3) MUTATED       32     13     31     24
  AMP PEAK 19(11Q13.3) WILD-TYPE     64     31     33     35
D19V6, multiclass
        clus
vv       AMP PEAK 19(11Q13.3) MUTATED AMP PEAK 19(11Q13.3) WILD-TYPE
  CLUS_1                           32                             64
  CLUS_2                           13                             31
  CLUS_3                           31                             33
  CLUS_4                           24                             35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11Q13.3) MUTATED       25     50     26
  AMP PEAK 19(11Q13.3) WILD-TYPE     38     65     59
D19V7, multiclass
        clus
vv       AMP PEAK 19(11Q13.3) MUTATED AMP PEAK 19(11Q13.3) WILD-TYPE
  CLUS_1                           25                             38
  CLUS_2                           50                             65
  CLUS_3                           26                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 19(11Q13.3) MUTATED       14     13     18      8     13     20
  AMP PEAK 19(11Q13.3) WILD-TYPE     30     11     13     26     34     16
                                vv
clus                             CLUS_7
  AMP PEAK 19(11Q13.3) MUTATED       15
  AMP PEAK 19(11Q13.3) WILD-TYPE     32
D19V8, multiclass
        clus
vv       AMP PEAK 19(11Q13.3) MUTATED AMP PEAK 19(11Q13.3) WILD-TYPE
  CLUS_1                           14                             30
  CLUS_2                           13                             11
  CLUS_3                           18                             13
  CLUS_4                            8                             26
  CLUS_5                           13                             34
  CLUS_6                           20                             16
  CLUS_7                           15                             32
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11Q13.3) MUTATED       21     41     39
  AMP PEAK 19(11Q13.3) WILD-TYPE     26     71     65
D19V9, multiclass
        clus
vv       AMP PEAK 19(11Q13.3) MUTATED AMP PEAK 19(11Q13.3) WILD-TYPE
  CLUS_1                           21                             26
  CLUS_2                           41                             71
  CLUS_3                           39                             65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11Q13.3) MUTATED       16     54     31
  AMP PEAK 19(11Q13.3) WILD-TYPE     27     78     57
D19V10, multiclass
        clus
vv       AMP PEAK 19(11Q13.3) MUTATED AMP PEAK 19(11Q13.3) WILD-TYPE
  CLUS_1                           16                             27
  CLUS_2                           54                             78
  CLUS_3                           31                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(20) Variable = AMP PEAK 20(11Q22.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q22.2) MUTATED       14     12     23
  AMP PEAK 20(11Q22.2) WILD-TYPE     53     84     78
D20V1, multiclass
        clus
vv       AMP PEAK 20(11Q22.2) MUTATED AMP PEAK 20(11Q22.2) WILD-TYPE
  CLUS_1                           14                             53
  CLUS_2                           12                             84
  CLUS_3                           23                             78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(11Q22.2) MUTATED       18     16      6      6
  AMP PEAK 20(11Q22.2) WILD-TYPE     71     44     48     41
D20V2, multiclass
        clus
vv       AMP PEAK 20(11Q22.2) MUTATED AMP PEAK 20(11Q22.2) WILD-TYPE
  CLUS_1                           18                             71
  CLUS_2                           16                             44
  CLUS_3                            6                             48
  CLUS_4                            6                             41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 20(11Q22.2) MUTATED        6      3      7      0      4
  AMP PEAK 20(11Q22.2) WILD-TYPE     31     26     27      5     15
D20V3, multiclass
        clus
vv       AMP PEAK 20(11Q22.2) MUTATED AMP PEAK 20(11Q22.2) WILD-TYPE
  CLUS_1                            6                             31
  CLUS_2                            3                             26
  CLUS_3                            7                             27
  CLUS_4                            0                              5
  CLUS_5                            4                             15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(11Q22.2) MUTATED        5      5      5      5
  AMP PEAK 20(11Q22.2) WILD-TYPE     37     33     21     13
D20V4, multiclass
        clus
vv       AMP PEAK 20(11Q22.2) MUTATED AMP PEAK 20(11Q22.2) WILD-TYPE
  CLUS_1                            5                             37
  CLUS_2                            5                             33
  CLUS_3                            5                             21
  CLUS_4                            5                             13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q22.2) MUTATED       20      9     20
  AMP PEAK 20(11Q22.2) WILD-TYPE     98     63     53
D20V5, multiclass
        clus
vv       AMP PEAK 20(11Q22.2) MUTATED AMP PEAK 20(11Q22.2) WILD-TYPE
  CLUS_1                           20                             98
  CLUS_2                            9                             63
  CLUS_3                           20                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(11Q22.2) MUTATED        9      8     17     15
  AMP PEAK 20(11Q22.2) WILD-TYPE     87     36     47     44
D20V6, multiclass
        clus
vv       AMP PEAK 20(11Q22.2) MUTATED AMP PEAK 20(11Q22.2) WILD-TYPE
  CLUS_1                            9                             87
  CLUS_2                            8                             36
  CLUS_3                           17                             47
  CLUS_4                           15                             44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q22.2) MUTATED       17     21     11
  AMP PEAK 20(11Q22.2) WILD-TYPE     46     94     74
D20V7, multiclass
        clus
vv       AMP PEAK 20(11Q22.2) MUTATED AMP PEAK 20(11Q22.2) WILD-TYPE
  CLUS_1                           17                             46
  CLUS_2                           21                             94
  CLUS_3                           11                             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 20(11Q22.2) MUTATED        8     12      6      3      4     10
  AMP PEAK 20(11Q22.2) WILD-TYPE     36     12     25     31     43     26
                                vv
clus                             CLUS_7
  AMP PEAK 20(11Q22.2) MUTATED        6
  AMP PEAK 20(11Q22.2) WILD-TYPE     41
D20V8, multiclass
        clus
vv       AMP PEAK 20(11Q22.2) MUTATED AMP PEAK 20(11Q22.2) WILD-TYPE
  CLUS_1                            8                             36
  CLUS_2                           12                             12
  CLUS_3                            6                             25
  CLUS_4                            3                             31
  CLUS_5                            4                             43
  CLUS_6                           10                             26
  CLUS_7                            6                             41
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q22.2) MUTATED       13     21     15
  AMP PEAK 20(11Q22.2) WILD-TYPE     34     91     89
D20V9, multiclass
        clus
vv       AMP PEAK 20(11Q22.2) MUTATED AMP PEAK 20(11Q22.2) WILD-TYPE
  CLUS_1                           13                             34
  CLUS_2                           21                             91
  CLUS_3                           15                             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q22.2) MUTATED       10     28     11
  AMP PEAK 20(11Q22.2) WILD-TYPE     33    104     77
D20V10, multiclass
        clus
vv       AMP PEAK 20(11Q22.2) MUTATED AMP PEAK 20(11Q22.2) WILD-TYPE
  CLUS_1                           10                             33
  CLUS_2                           28                            104
  CLUS_3                           11                             77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(21) Variable = AMP PEAK 21(12Q15) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12Q15) MUTATED       24     17     36
  AMP PEAK 21(12Q15) WILD-TYPE     43     79     65
D21V1, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         24                           43
  CLUS_2                         17                           79
  CLUS_3                         36                           65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(12Q15) MUTATED       21     25     16     13
  AMP PEAK 21(12Q15) WILD-TYPE     68     35     38     34
D21V2, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         21                           68
  CLUS_2                         25                           35
  CLUS_3                         16                           38
  CLUS_4                         13                           34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 21(12Q15) MUTATED       18      4     12      2      5
  AMP PEAK 21(12Q15) WILD-TYPE     19     25     22      3     14
D21V3, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         18                           19
  CLUS_2                          4                           25
  CLUS_3                         12                           22
  CLUS_4                          2                            3
  CLUS_5                          5                           14
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(12Q15) MUTATED       20      6      8      7
  AMP PEAK 21(12Q15) WILD-TYPE     22     32     18     11
D21V4, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         20                           22
  CLUS_2                          6                           32
  CLUS_3                          8                           18
  CLUS_4                          7                           11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12Q15) MUTATED       43     21     13
  AMP PEAK 21(12Q15) WILD-TYPE     75     51     60
D21V5, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         43                           75
  CLUS_2                         21                           51
  CLUS_3                         13                           60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(12Q15) MUTATED       33     11     24      9
  AMP PEAK 21(12Q15) WILD-TYPE     63     33     40     50
D21V6, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         33                           63
  CLUS_2                         11                           33
  CLUS_3                         24                           40
  CLUS_4                          9                           50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12Q15) MUTATED       24     29     24
  AMP PEAK 21(12Q15) WILD-TYPE     39     86     61
D21V7, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         24                           39
  CLUS_2                         29                           86
  CLUS_3                         24                           61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 21(12Q15) MUTATED       22      5     10     12     12      5     11
  AMP PEAK 21(12Q15) WILD-TYPE     22     19     21     22     35     31     36
D21V8, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         22                           22
  CLUS_2                          5                           19
  CLUS_3                         10                           21
  CLUS_4                         12                           22
  CLUS_5                         12                           35
  CLUS_6                          5                           31
  CLUS_7                         11                           36
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12Q15) MUTATED       21     27     29
  AMP PEAK 21(12Q15) WILD-TYPE     26     85     75
D21V9, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         21                           26
  CLUS_2                         27                           85
  CLUS_3                         29                           75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12Q15) MUTATED       21     31     25
  AMP PEAK 21(12Q15) WILD-TYPE     22    101     63
D21V10, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         21                           22
  CLUS_2                         31                          101
  CLUS_3                         25                           63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(22) Variable = AMP PEAK 22(13Q22.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(13Q22.1) MUTATED       26     26     32
  AMP PEAK 22(13Q22.1) WILD-TYPE     41     70     69
D22V1, multiclass
        clus
vv       AMP PEAK 22(13Q22.1) MUTATED AMP PEAK 22(13Q22.1) WILD-TYPE
  CLUS_1                           26                             41
  CLUS_2                           26                             70
  CLUS_3                           32                             69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(13Q22.1) MUTATED       31     18     14     14
  AMP PEAK 22(13Q22.1) WILD-TYPE     58     42     40     33
D22V2, multiclass
        clus
vv       AMP PEAK 22(13Q22.1) MUTATED AMP PEAK 22(13Q22.1) WILD-TYPE
  CLUS_1                           31                             58
  CLUS_2                           18                             42
  CLUS_3                           14                             40
  CLUS_4                           14                             33
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 22(13Q22.1) MUTATED       12     10     12      2      5
  AMP PEAK 22(13Q22.1) WILD-TYPE     25     19     22      3     14
D22V3, multiclass
        clus
vv       AMP PEAK 22(13Q22.1) MUTATED AMP PEAK 22(13Q22.1) WILD-TYPE
  CLUS_1                           12                             25
  CLUS_2                           10                             19
  CLUS_3                           12                             22
  CLUS_4                            2                              3
  CLUS_5                            5                             14
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(13Q22.1) MUTATED       12     13     10      6
  AMP PEAK 22(13Q22.1) WILD-TYPE     30     25     16     12
D22V4, multiclass
        clus
vv       AMP PEAK 22(13Q22.1) MUTATED AMP PEAK 22(13Q22.1) WILD-TYPE
  CLUS_1                           12                             30
  CLUS_2                           13                             25
  CLUS_3                           10                             16
  CLUS_4                            6                             12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(13Q22.1) MUTATED       37     22     25
  AMP PEAK 22(13Q22.1) WILD-TYPE     81     50     48
D22V5, multiclass
        clus
vv       AMP PEAK 22(13Q22.1) MUTATED AMP PEAK 22(13Q22.1) WILD-TYPE
  CLUS_1                           37                             81
  CLUS_2                           22                             50
  CLUS_3                           25                             48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(13Q22.1) MUTATED       29     14     22     19
  AMP PEAK 22(13Q22.1) WILD-TYPE     67     30     42     40
D22V6, multiclass
        clus
vv       AMP PEAK 22(13Q22.1) MUTATED AMP PEAK 22(13Q22.1) WILD-TYPE
  CLUS_1                           29                             67
  CLUS_2                           14                             30
  CLUS_3                           22                             42
  CLUS_4                           19                             40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(13Q22.1) MUTATED       21     34     29
  AMP PEAK 22(13Q22.1) WILD-TYPE     42     81     56
D22V7, multiclass
        clus
vv       AMP PEAK 22(13Q22.1) MUTATED AMP PEAK 22(13Q22.1) WILD-TYPE
  CLUS_1                           21                             42
  CLUS_2                           34                             81
  CLUS_3                           29                             56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 22(13Q22.1) MUTATED       17      6     11     13     14     12
  AMP PEAK 22(13Q22.1) WILD-TYPE     27     18     20     21     33     24
                                vv
clus                             CLUS_7
  AMP PEAK 22(13Q22.1) MUTATED       11
  AMP PEAK 22(13Q22.1) WILD-TYPE     36
D22V8, multiclass
        clus
vv       AMP PEAK 22(13Q22.1) MUTATED AMP PEAK 22(13Q22.1) WILD-TYPE
  CLUS_1                           17                             27
  CLUS_2                            6                             18
  CLUS_3                           11                             20
  CLUS_4                           13                             21
  CLUS_5                           14                             33
  CLUS_6                           12                             24
  CLUS_7                           11                             36
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(13Q22.1) MUTATED       18     35     31
  AMP PEAK 22(13Q22.1) WILD-TYPE     29     77     73
D22V9, multiclass
        clus
vv       AMP PEAK 22(13Q22.1) MUTATED AMP PEAK 22(13Q22.1) WILD-TYPE
  CLUS_1                           18                             29
  CLUS_2                           35                             77
  CLUS_3                           31                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(13Q22.1) MUTATED       16     45     23
  AMP PEAK 22(13Q22.1) WILD-TYPE     27     87     65
D22V10, multiclass
        clus
vv       AMP PEAK 22(13Q22.1) MUTATED AMP PEAK 22(13Q22.1) WILD-TYPE
  CLUS_1                           16                             27
  CLUS_2                           45                             87
  CLUS_3                           23                             65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(23) Variable = AMP PEAK 23(14Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(14Q11.2) MUTATED       18     21     24
  AMP PEAK 23(14Q11.2) WILD-TYPE     49     75     77
D23V1, multiclass
        clus
vv       AMP PEAK 23(14Q11.2) MUTATED AMP PEAK 23(14Q11.2) WILD-TYPE
  CLUS_1                           18                             49
  CLUS_2                           21                             75
  CLUS_3                           24                             77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(14Q11.2) MUTATED       23     15     15      7
  AMP PEAK 23(14Q11.2) WILD-TYPE     66     45     39     40
D23V2, multiclass
        clus
vv       AMP PEAK 23(14Q11.2) MUTATED AMP PEAK 23(14Q11.2) WILD-TYPE
  CLUS_1                           23                             66
  CLUS_2                           15                             45
  CLUS_3                           15                             39
  CLUS_4                            7                             40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 23(14Q11.2) MUTATED        8      6     11      0      5
  AMP PEAK 23(14Q11.2) WILD-TYPE     29     23     23      5     14
D23V3, multiclass
        clus
vv       AMP PEAK 23(14Q11.2) MUTATED AMP PEAK 23(14Q11.2) WILD-TYPE
  CLUS_1                            8                             29
  CLUS_2                            6                             23
  CLUS_3                           11                             23
  CLUS_4                            0                              5
  CLUS_5                            5                             14
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(14Q11.2) MUTATED        7      7     11      5
  AMP PEAK 23(14Q11.2) WILD-TYPE     35     31     15     13
D23V4, multiclass
        clus
vv       AMP PEAK 23(14Q11.2) MUTATED AMP PEAK 23(14Q11.2) WILD-TYPE
  CLUS_1                            7                             35
  CLUS_2                            7                             31
  CLUS_3                           11                             15
  CLUS_4                            5                             13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(14Q11.2) MUTATED       26     15     22
  AMP PEAK 23(14Q11.2) WILD-TYPE     92     57     51
D23V5, multiclass
        clus
vv       AMP PEAK 23(14Q11.2) MUTATED AMP PEAK 23(14Q11.2) WILD-TYPE
  CLUS_1                           26                             92
  CLUS_2                           15                             57
  CLUS_3                           22                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(14Q11.2) MUTATED       22     14     11     16
  AMP PEAK 23(14Q11.2) WILD-TYPE     74     30     53     43
D23V6, multiclass
        clus
vv       AMP PEAK 23(14Q11.2) MUTATED AMP PEAK 23(14Q11.2) WILD-TYPE
  CLUS_1                           22                             74
  CLUS_2                           14                             30
  CLUS_3                           11                             53
  CLUS_4                           16                             43
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(14Q11.2) MUTATED       18     27     17
  AMP PEAK 23(14Q11.2) WILD-TYPE     45     88     68
D23V7, multiclass
        clus
vv       AMP PEAK 23(14Q11.2) MUTATED AMP PEAK 23(14Q11.2) WILD-TYPE
  CLUS_1                           18                             45
  CLUS_2                           27                             88
  CLUS_3                           17                             68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 23(14Q11.2) MUTATED       12      8     12     11      2     12
  AMP PEAK 23(14Q11.2) WILD-TYPE     32     16     19     23     45     24
                                vv
clus                             CLUS_7
  AMP PEAK 23(14Q11.2) MUTATED        5
  AMP PEAK 23(14Q11.2) WILD-TYPE     42
D23V8, multiclass
        clus
vv       AMP PEAK 23(14Q11.2) MUTATED AMP PEAK 23(14Q11.2) WILD-TYPE
  CLUS_1                           12                             32
  CLUS_2                            8                             16
  CLUS_3                           12                             19
  CLUS_4                           11                             23
  CLUS_5                            2                             45
  CLUS_6                           12                             24
  CLUS_7                            5                             42
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(14Q11.2) MUTATED       13     23     26
  AMP PEAK 23(14Q11.2) WILD-TYPE     34     89     78
D23V9, multiclass
        clus
vv       AMP PEAK 23(14Q11.2) MUTATED AMP PEAK 23(14Q11.2) WILD-TYPE
  CLUS_1                           13                             34
  CLUS_2                           23                             89
  CLUS_3                           26                             78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(14Q11.2) MUTATED       10     31     21
  AMP PEAK 23(14Q11.2) WILD-TYPE     33    101     67
D23V10, multiclass
        clus
vv       AMP PEAK 23(14Q11.2) MUTATED AMP PEAK 23(14Q11.2) WILD-TYPE
  CLUS_1                           10                             33
  CLUS_2                           31                            101
  CLUS_3                           21                             67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(24) Variable = AMP PEAK 24(16P13.13) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(16P13.13) MUTATED       25     11     20
  AMP PEAK 24(16P13.13) WILD-TYPE     42     85     81
D24V1, multiclass
        clus
vv       AMP PEAK 24(16P13.13) MUTATED AMP PEAK 24(16P13.13) WILD-TYPE
  CLUS_1                            25                              42
  CLUS_2                            11                              85
  CLUS_3                            20                              81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(16P13.13) MUTATED       17     19     12      8
  AMP PEAK 24(16P13.13) WILD-TYPE     72     41     42     39
D24V2, multiclass
        clus
vv       AMP PEAK 24(16P13.13) MUTATED AMP PEAK 24(16P13.13) WILD-TYPE
  CLUS_1                            17                              72
  CLUS_2                            19                              41
  CLUS_3                            12                              42
  CLUS_4                             8                              39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 24(16P13.13) MUTATED       10      4      9      0      5
  AMP PEAK 24(16P13.13) WILD-TYPE     27     25     25      5     14
D24V3, multiclass
        clus
vv       AMP PEAK 24(16P13.13) MUTATED AMP PEAK 24(16P13.13) WILD-TYPE
  CLUS_1                            10                              27
  CLUS_2                             4                              25
  CLUS_3                             9                              25
  CLUS_4                             0                               5
  CLUS_5                             5                              14
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(16P13.13) MUTATED        8      8      6      6
  AMP PEAK 24(16P13.13) WILD-TYPE     34     30     20     12
D24V4, multiclass
        clus
vv       AMP PEAK 24(16P13.13) MUTATED AMP PEAK 24(16P13.13) WILD-TYPE
  CLUS_1                             8                              34
  CLUS_2                             8                              30
  CLUS_3                             6                              20
  CLUS_4                             6                              12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(16P13.13) MUTATED       30     12     14
  AMP PEAK 24(16P13.13) WILD-TYPE     88     60     59
D24V5, multiclass
        clus
vv       AMP PEAK 24(16P13.13) MUTATED AMP PEAK 24(16P13.13) WILD-TYPE
  CLUS_1                            30                              88
  CLUS_2                            12                              60
  CLUS_3                            14                              59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(16P13.13) MUTATED       22      7     15     12
  AMP PEAK 24(16P13.13) WILD-TYPE     74     37     49     47
D24V6, multiclass
        clus
vv       AMP PEAK 24(16P13.13) MUTATED AMP PEAK 24(16P13.13) WILD-TYPE
  CLUS_1                            22                              74
  CLUS_2                             7                              37
  CLUS_3                            15                              49
  CLUS_4                            12                              47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(16P13.13) MUTATED       16     22     18
  AMP PEAK 24(16P13.13) WILD-TYPE     47     93     67
D24V7, multiclass
        clus
vv       AMP PEAK 24(16P13.13) MUTATED AMP PEAK 24(16P13.13) WILD-TYPE
  CLUS_1                            16                              47
  CLUS_2                            22                              93
  CLUS_3                            18                              67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 24(16P13.13) MUTATED       10      6      7     12     10      5
  AMP PEAK 24(16P13.13) WILD-TYPE     34     18     24     22     37     31
                                 vv
clus                              CLUS_7
  AMP PEAK 24(16P13.13) MUTATED        6
  AMP PEAK 24(16P13.13) WILD-TYPE     41
D24V8, multiclass
        clus
vv       AMP PEAK 24(16P13.13) MUTATED AMP PEAK 24(16P13.13) WILD-TYPE
  CLUS_1                            10                              34
  CLUS_2                             6                              18
  CLUS_3                             7                              24
  CLUS_4                            12                              22
  CLUS_5                            10                              37
  CLUS_6                             5                              31
  CLUS_7                             6                              41
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(16P13.13) MUTATED       11     20     25
  AMP PEAK 24(16P13.13) WILD-TYPE     36     92     79
D24V9, multiclass
        clus
vv       AMP PEAK 24(16P13.13) MUTATED AMP PEAK 24(16P13.13) WILD-TYPE
  CLUS_1                            11                              36
  CLUS_2                            20                              92
  CLUS_3                            25                              79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(16P13.13) MUTATED       11     24     21
  AMP PEAK 24(16P13.13) WILD-TYPE     32    108     67
D24V10, multiclass
        clus
vv       AMP PEAK 24(16P13.13) MUTATED AMP PEAK 24(16P13.13) WILD-TYPE
  CLUS_1                            11                              32
  CLUS_2                            24                             108
  CLUS_3                            21                              67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(25) Variable = AMP PEAK 25(16P11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(16P11.2) MUTATED       23     14     27
  AMP PEAK 25(16P11.2) WILD-TYPE     44     82     74
D25V1, multiclass
        clus
vv       AMP PEAK 25(16P11.2) MUTATED AMP PEAK 25(16P11.2) WILD-TYPE
  CLUS_1                           23                             44
  CLUS_2                           14                             82
  CLUS_3                           27                             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(16P11.2) MUTATED       23     19     14      7
  AMP PEAK 25(16P11.2) WILD-TYPE     66     41     40     40
D25V2, multiclass
        clus
vv       AMP PEAK 25(16P11.2) MUTATED AMP PEAK 25(16P11.2) WILD-TYPE
  CLUS_1                           23                             66
  CLUS_2                           19                             41
  CLUS_3                           14                             40
  CLUS_4                            7                             40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 25(16P11.2) MUTATED        8      9     11      0      7
  AMP PEAK 25(16P11.2) WILD-TYPE     29     20     23      5     12
D25V3, multiclass
        clus
vv       AMP PEAK 25(16P11.2) MUTATED AMP PEAK 25(16P11.2) WILD-TYPE
  CLUS_1                            8                             29
  CLUS_2                            9                             20
  CLUS_3                           11                             23
  CLUS_4                            0                              5
  CLUS_5                            7                             12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(16P11.2) MUTATED        8     12      8      7
  AMP PEAK 25(16P11.2) WILD-TYPE     34     26     18     11
D25V4, multiclass
        clus
vv       AMP PEAK 25(16P11.2) MUTATED AMP PEAK 25(16P11.2) WILD-TYPE
  CLUS_1                            8                             34
  CLUS_2                           12                             26
  CLUS_3                            8                             18
  CLUS_4                            7                             11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(16P11.2) MUTATED       27     17     20
  AMP PEAK 25(16P11.2) WILD-TYPE     91     55     53
D25V5, multiclass
        clus
vv       AMP PEAK 25(16P11.2) MUTATED AMP PEAK 25(16P11.2) WILD-TYPE
  CLUS_1                           27                             91
  CLUS_2                           17                             55
  CLUS_3                           20                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(16P11.2) MUTATED       21      9     18     16
  AMP PEAK 25(16P11.2) WILD-TYPE     75     35     46     43
D25V6, multiclass
        clus
vv       AMP PEAK 25(16P11.2) MUTATED AMP PEAK 25(16P11.2) WILD-TYPE
  CLUS_1                           21                             75
  CLUS_2                            9                             35
  CLUS_3                           18                             46
  CLUS_4                           16                             43
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(16P11.2) MUTATED       17     27     20
  AMP PEAK 25(16P11.2) WILD-TYPE     46     88     65
D25V7, multiclass
        clus
vv       AMP PEAK 25(16P11.2) MUTATED AMP PEAK 25(16P11.2) WILD-TYPE
  CLUS_1                           17                             46
  CLUS_2                           27                             88
  CLUS_3                           20                             65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 25(16P11.2) MUTATED       11      7      8     11     12      8
  AMP PEAK 25(16P11.2) WILD-TYPE     33     17     23     23     35     28
                                vv
clus                             CLUS_7
  AMP PEAK 25(16P11.2) MUTATED        7
  AMP PEAK 25(16P11.2) WILD-TYPE     40
D25V8, multiclass
        clus
vv       AMP PEAK 25(16P11.2) MUTATED AMP PEAK 25(16P11.2) WILD-TYPE
  CLUS_1                           11                             33
  CLUS_2                            7                             17
  CLUS_3                            8                             23
  CLUS_4                           11                             23
  CLUS_5                           12                             35
  CLUS_6                            8                             28
  CLUS_7                            7                             40
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(16P11.2) MUTATED       13     28     23
  AMP PEAK 25(16P11.2) WILD-TYPE     34     84     81
D25V9, multiclass
        clus
vv       AMP PEAK 25(16P11.2) MUTATED AMP PEAK 25(16P11.2) WILD-TYPE
  CLUS_1                           13                             34
  CLUS_2                           28                             84
  CLUS_3                           23                             81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(16P11.2) MUTATED       11     32     21
  AMP PEAK 25(16P11.2) WILD-TYPE     32    100     67
D25V10, multiclass
        clus
vv       AMP PEAK 25(16P11.2) MUTATED AMP PEAK 25(16P11.2) WILD-TYPE
  CLUS_1                           11                             32
  CLUS_2                           32                            100
  CLUS_3                           21                             67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(26) Variable = AMP PEAK 26(16Q22.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(16Q22.1) MUTATED       25     20     30
  AMP PEAK 26(16Q22.1) WILD-TYPE     42     76     71
D26V1, multiclass
        clus
vv       AMP PEAK 26(16Q22.1) MUTATED AMP PEAK 26(16Q22.1) WILD-TYPE
  CLUS_1                           25                             42
  CLUS_2                           20                             76
  CLUS_3                           30                             71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(16Q22.1) MUTATED       29     17     16     12
  AMP PEAK 26(16Q22.1) WILD-TYPE     60     43     38     35
D26V2, multiclass
        clus
vv       AMP PEAK 26(16Q22.1) MUTATED AMP PEAK 26(16Q22.1) WILD-TYPE
  CLUS_1                           29                             60
  CLUS_2                           17                             43
  CLUS_3                           16                             38
  CLUS_4                           12                             35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 26(16Q22.1) MUTATED        9      6     16      0      6
  AMP PEAK 26(16Q22.1) WILD-TYPE     28     23     18      5     13
D26V3, multiclass
        clus
vv       AMP PEAK 26(16Q22.1) MUTATED AMP PEAK 26(16Q22.1) WILD-TYPE
  CLUS_1                            9                             28
  CLUS_2                            6                             23
  CLUS_3                           16                             18
  CLUS_4                            0                              5
  CLUS_5                            6                             13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(16Q22.1) MUTATED        8     10     12      7
  AMP PEAK 26(16Q22.1) WILD-TYPE     34     28     14     11
D26V4, multiclass
        clus
vv       AMP PEAK 26(16Q22.1) MUTATED AMP PEAK 26(16Q22.1) WILD-TYPE
  CLUS_1                            8                             34
  CLUS_2                           10                             28
  CLUS_3                           12                             14
  CLUS_4                            7                             11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(16Q22.1) MUTATED       26     27     22
  AMP PEAK 26(16Q22.1) WILD-TYPE     92     45     51
D26V5, multiclass
        clus
vv       AMP PEAK 26(16Q22.1) MUTATED AMP PEAK 26(16Q22.1) WILD-TYPE
  CLUS_1                           26                             92
  CLUS_2                           27                             45
  CLUS_3                           22                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(16Q22.1) MUTATED       19     12     25     19
  AMP PEAK 26(16Q22.1) WILD-TYPE     77     32     39     40
D26V6, multiclass
        clus
vv       AMP PEAK 26(16Q22.1) MUTATED AMP PEAK 26(16Q22.1) WILD-TYPE
  CLUS_1                           19                             77
  CLUS_2                           12                             32
  CLUS_3                           25                             39
  CLUS_4                           19                             40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(16Q22.1) MUTATED       20     28     27
  AMP PEAK 26(16Q22.1) WILD-TYPE     43     87     58
D26V7, multiclass
        clus
vv       AMP PEAK 26(16Q22.1) MUTATED AMP PEAK 26(16Q22.1) WILD-TYPE
  CLUS_1                           20                             43
  CLUS_2                           28                             87
  CLUS_3                           27                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 26(16Q22.1) MUTATED       13     12      8     11     13     10
  AMP PEAK 26(16Q22.1) WILD-TYPE     31     12     23     23     34     26
                                vv
clus                             CLUS_7
  AMP PEAK 26(16Q22.1) MUTATED        8
  AMP PEAK 26(16Q22.1) WILD-TYPE     39
D26V8, multiclass
        clus
vv       AMP PEAK 26(16Q22.1) MUTATED AMP PEAK 26(16Q22.1) WILD-TYPE
  CLUS_1                           13                             31
  CLUS_2                           12                             12
  CLUS_3                            8                             23
  CLUS_4                           11                             23
  CLUS_5                           13                             34
  CLUS_6                           10                             26
  CLUS_7                            8                             39
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(16Q22.1) MUTATED       15     36     24
  AMP PEAK 26(16Q22.1) WILD-TYPE     32     76     80
D26V9, multiclass
        clus
vv       AMP PEAK 26(16Q22.1) MUTATED AMP PEAK 26(16Q22.1) WILD-TYPE
  CLUS_1                           15                             32
  CLUS_2                           36                             76
  CLUS_3                           24                             80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(16Q22.1) MUTATED       13     41     21
  AMP PEAK 26(16Q22.1) WILD-TYPE     30     91     67
D26V10, multiclass
        clus
vv       AMP PEAK 26(16Q22.1) MUTATED AMP PEAK 26(16Q22.1) WILD-TYPE
  CLUS_1                           13                             30
  CLUS_2                           41                             91
  CLUS_3                           21                             67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(27) Variable = AMP PEAK 27(17Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(17Q11.2) MUTATED       45     17     55
  AMP PEAK 27(17Q11.2) WILD-TYPE     22     79     46
D27V1, multiclass
        clus
vv       AMP PEAK 27(17Q11.2) MUTATED AMP PEAK 27(17Q11.2) WILD-TYPE
  CLUS_1                           45                             22
  CLUS_2                           17                             79
  CLUS_3                           55                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(17Q11.2) MUTATED       24     36     30     21
  AMP PEAK 27(17Q11.2) WILD-TYPE     65     24     24     26
D27V2, multiclass
        clus
vv       AMP PEAK 27(17Q11.2) MUTATED AMP PEAK 27(17Q11.2) WILD-TYPE
  CLUS_1                           24                             65
  CLUS_2                           36                             24
  CLUS_3                           30                             24
  CLUS_4                           21                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 27(17Q11.2) MUTATED       24     11     15      0      8
  AMP PEAK 27(17Q11.2) WILD-TYPE     13     18     19      5     11
D27V3, multiclass
        clus
vv       AMP PEAK 27(17Q11.2) MUTATED AMP PEAK 27(17Q11.2) WILD-TYPE
  CLUS_1                           24                             13
  CLUS_2                           11                             18
  CLUS_3                           15                             19
  CLUS_4                            0                              5
  CLUS_5                            8                             11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(17Q11.2) MUTATED       26     13     11      8
  AMP PEAK 27(17Q11.2) WILD-TYPE     16     25     15     10
D27V4, multiclass
        clus
vv       AMP PEAK 27(17Q11.2) MUTATED AMP PEAK 27(17Q11.2) WILD-TYPE
  CLUS_1                           26                             16
  CLUS_2                           13                             25
  CLUS_3                           11                             15
  CLUS_4                            8                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(17Q11.2) MUTATED       68     27     22
  AMP PEAK 27(17Q11.2) WILD-TYPE     50     45     51
D27V5, multiclass
        clus
vv       AMP PEAK 27(17Q11.2) MUTATED AMP PEAK 27(17Q11.2) WILD-TYPE
  CLUS_1                           68                             50
  CLUS_2                           27                             45
  CLUS_3                           22                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(17Q11.2) MUTATED       53     16     32     16
  AMP PEAK 27(17Q11.2) WILD-TYPE     43     28     32     43
D27V6, multiclass
        clus
vv       AMP PEAK 27(17Q11.2) MUTATED AMP PEAK 27(17Q11.2) WILD-TYPE
  CLUS_1                           53                             43
  CLUS_2                           16                             28
  CLUS_3                           32                             32
  CLUS_4                           16                             43
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(17Q11.2) MUTATED       33     54     29
  AMP PEAK 27(17Q11.2) WILD-TYPE     30     61     56
D27V7, multiclass
        clus
vv       AMP PEAK 27(17Q11.2) MUTATED AMP PEAK 27(17Q11.2) WILD-TYPE
  CLUS_1                           33                             30
  CLUS_2                           54                             61
  CLUS_3                           29                             56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 27(17Q11.2) MUTATED       28      6     22     13     19     13
  AMP PEAK 27(17Q11.2) WILD-TYPE     16     18      9     21     28     23
                                vv
clus                             CLUS_7
  AMP PEAK 27(17Q11.2) MUTATED       15
  AMP PEAK 27(17Q11.2) WILD-TYPE     32
D27V8, multiclass
        clus
vv       AMP PEAK 27(17Q11.2) MUTATED AMP PEAK 27(17Q11.2) WILD-TYPE
  CLUS_1                           28                             16
  CLUS_2                            6                             18
  CLUS_3                           22                              9
  CLUS_4                           13                             21
  CLUS_5                           19                             28
  CLUS_6                           13                             23
  CLUS_7                           15                             32
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(17Q11.2) MUTATED       28     36     52
  AMP PEAK 27(17Q11.2) WILD-TYPE     19     76     52
D27V9, multiclass
        clus
vv       AMP PEAK 27(17Q11.2) MUTATED AMP PEAK 27(17Q11.2) WILD-TYPE
  CLUS_1                           28                             19
  CLUS_2                           36                             76
  CLUS_3                           52                             52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(17Q11.2) MUTATED       26     47     43
  AMP PEAK 27(17Q11.2) WILD-TYPE     17     85     45
D27V10, multiclass
        clus
vv       AMP PEAK 27(17Q11.2) MUTATED AMP PEAK 27(17Q11.2) WILD-TYPE
  CLUS_1                           26                             17
  CLUS_2                           47                             85
  CLUS_3                           43                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(28) Variable = AMP PEAK 28(17Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(17Q12) MUTATED       40     19     51
  AMP PEAK 28(17Q12) WILD-TYPE     27     77     50
D28V1, multiclass
        clus
vv       AMP PEAK 28(17Q12) MUTATED AMP PEAK 28(17Q12) WILD-TYPE
  CLUS_1                         40                           27
  CLUS_2                         19                           77
  CLUS_3                         51                           50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(17Q12) MUTATED       29     29     26     19
  AMP PEAK 28(17Q12) WILD-TYPE     60     31     28     28
D28V2, multiclass
        clus
vv       AMP PEAK 28(17Q12) MUTATED AMP PEAK 28(17Q12) WILD-TYPE
  CLUS_1                         29                           60
  CLUS_2                         29                           31
  CLUS_3                         26                           28
  CLUS_4                         19                           28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 28(17Q12) MUTATED       22     11     13      0      8
  AMP PEAK 28(17Q12) WILD-TYPE     15     18     21      5     11
D28V3, multiclass
        clus
vv       AMP PEAK 28(17Q12) MUTATED AMP PEAK 28(17Q12) WILD-TYPE
  CLUS_1                         22                           15
  CLUS_2                         11                           18
  CLUS_3                         13                           21
  CLUS_4                          0                            5
  CLUS_5                          8                           11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(17Q12) MUTATED       26     11      9      8
  AMP PEAK 28(17Q12) WILD-TYPE     16     27     17     10
D28V4, multiclass
        clus
vv       AMP PEAK 28(17Q12) MUTATED AMP PEAK 28(17Q12) WILD-TYPE
  CLUS_1                         26                           16
  CLUS_2                         11                           27
  CLUS_3                          9                           17
  CLUS_4                          8                           10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(17Q12) MUTATED       62     26     22
  AMP PEAK 28(17Q12) WILD-TYPE     56     46     51
D28V5, multiclass
        clus
vv       AMP PEAK 28(17Q12) MUTATED AMP PEAK 28(17Q12) WILD-TYPE
  CLUS_1                         62                           56
  CLUS_2                         26                           46
  CLUS_3                         22                           51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(17Q12) MUTATED       51     18     25     16
  AMP PEAK 28(17Q12) WILD-TYPE     45     26     39     43
D28V6, multiclass
        clus
vv       AMP PEAK 28(17Q12) MUTATED AMP PEAK 28(17Q12) WILD-TYPE
  CLUS_1                         51                           45
  CLUS_2                         18                           26
  CLUS_3                         25                           39
  CLUS_4                         16                           43
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(17Q12) MUTATED       36     48     25
  AMP PEAK 28(17Q12) WILD-TYPE     27     67     60
D28V7, multiclass
        clus
vv       AMP PEAK 28(17Q12) MUTATED AMP PEAK 28(17Q12) WILD-TYPE
  CLUS_1                         36                           27
  CLUS_2                         48                           67
  CLUS_3                         25                           60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 28(17Q12) MUTATED       29      8     18     14     15     11     14
  AMP PEAK 28(17Q12) WILD-TYPE     15     16     13     20     32     25     33
D28V8, multiclass
        clus
vv       AMP PEAK 28(17Q12) MUTATED AMP PEAK 28(17Q12) WILD-TYPE
  CLUS_1                         29                           15
  CLUS_2                          8                           16
  CLUS_3                         18                           13
  CLUS_4                         14                           20
  CLUS_5                         15                           32
  CLUS_6                         11                           25
  CLUS_7                         14                           33
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(17Q12) MUTATED       30     33     46
  AMP PEAK 28(17Q12) WILD-TYPE     17     79     58
D28V9, multiclass
        clus
vv       AMP PEAK 28(17Q12) MUTATED AMP PEAK 28(17Q12) WILD-TYPE
  CLUS_1                         30                           17
  CLUS_2                         33                           79
  CLUS_3                         46                           58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(17Q12) MUTATED       28     44     37
  AMP PEAK 28(17Q12) WILD-TYPE     15     88     51
D28V10, multiclass
        clus
vv       AMP PEAK 28(17Q12) MUTATED AMP PEAK 28(17Q12) WILD-TYPE
  CLUS_1                         28                           15
  CLUS_2                         44                           88
  CLUS_3                         37                           51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(29) Variable = AMP PEAK 29(19Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19Q12) MUTATED       46     22     41
  AMP PEAK 29(19Q12) WILD-TYPE     21     74     60
D29V1, multiclass
        clus
vv       AMP PEAK 29(19Q12) MUTATED AMP PEAK 29(19Q12) WILD-TYPE
  CLUS_1                         46                           21
  CLUS_2                         22                           74
  CLUS_3                         41                           60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(19Q12) MUTATED       28     39     17     20
  AMP PEAK 29(19Q12) WILD-TYPE     61     21     37     27
D29V2, multiclass
        clus
vv       AMP PEAK 29(19Q12) MUTATED AMP PEAK 29(19Q12) WILD-TYPE
  CLUS_1                         28                           61
  CLUS_2                         39                           21
  CLUS_3                         17                           37
  CLUS_4                         20                           27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 29(19Q12) MUTATED       18     11     16      1      7
  AMP PEAK 29(19Q12) WILD-TYPE     19     18     18      4     12
D29V3, multiclass
        clus
vv       AMP PEAK 29(19Q12) MUTATED AMP PEAK 29(19Q12) WILD-TYPE
  CLUS_1                         18                           19
  CLUS_2                         11                           18
  CLUS_3                         16                           18
  CLUS_4                          1                            4
  CLUS_5                          7                           12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(19Q12) MUTATED       20     16     12      5
  AMP PEAK 29(19Q12) WILD-TYPE     22     22     14     13
D29V4, multiclass
        clus
vv       AMP PEAK 29(19Q12) MUTATED AMP PEAK 29(19Q12) WILD-TYPE
  CLUS_1                         20                           22
  CLUS_2                         16                           22
  CLUS_3                         12                           14
  CLUS_4                          5                           13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19Q12) MUTATED       56     31     22
  AMP PEAK 29(19Q12) WILD-TYPE     62     41     51
D29V5, multiclass
        clus
vv       AMP PEAK 29(19Q12) MUTATED AMP PEAK 29(19Q12) WILD-TYPE
  CLUS_1                         56                           62
  CLUS_2                         31                           41
  CLUS_3                         22                           51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(19Q12) MUTATED       42     17     32     18
  AMP PEAK 29(19Q12) WILD-TYPE     54     27     32     41
D29V6, multiclass
        clus
vv       AMP PEAK 29(19Q12) MUTATED AMP PEAK 29(19Q12) WILD-TYPE
  CLUS_1                         42                           54
  CLUS_2                         17                           27
  CLUS_3                         32                           32
  CLUS_4                         18                           41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19Q12) MUTATED       29     42     38
  AMP PEAK 29(19Q12) WILD-TYPE     34     73     47
D29V7, multiclass
        clus
vv       AMP PEAK 29(19Q12) MUTATED AMP PEAK 29(19Q12) WILD-TYPE
  CLUS_1                         29                           34
  CLUS_2                         42                           73
  CLUS_3                         38                           47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 29(19Q12) MUTATED       25      8     19     13     24      9     11
  AMP PEAK 29(19Q12) WILD-TYPE     19     16     12     21     23     27     36
D29V8, multiclass
        clus
vv       AMP PEAK 29(19Q12) MUTATED AMP PEAK 29(19Q12) WILD-TYPE
  CLUS_1                         25                           19
  CLUS_2                          8                           16
  CLUS_3                         19                           12
  CLUS_4                         13                           21
  CLUS_5                         24                           23
  CLUS_6                          9                           27
  CLUS_7                         11                           36
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19Q12) MUTATED       24     45     40
  AMP PEAK 29(19Q12) WILD-TYPE     23     67     64
D29V9, multiclass
        clus
vv       AMP PEAK 29(19Q12) MUTATED AMP PEAK 29(19Q12) WILD-TYPE
  CLUS_1                         24                           23
  CLUS_2                         45                           67
  CLUS_3                         40                           64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19Q12) MUTATED       25     48     36
  AMP PEAK 29(19Q12) WILD-TYPE     18     84     52
D29V10, multiclass
        clus
vv       AMP PEAK 29(19Q12) MUTATED AMP PEAK 29(19Q12) WILD-TYPE
  CLUS_1                         25                           18
  CLUS_2                         48                           84
  CLUS_3                         36                           52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(30) Variable = AMP PEAK 30(19Q13.43) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q13.43) MUTATED       38     21     44
  AMP PEAK 30(19Q13.43) WILD-TYPE     29     75     57
D30V1, multiclass
        clus
vv       AMP PEAK 30(19Q13.43) MUTATED AMP PEAK 30(19Q13.43) WILD-TYPE
  CLUS_1                            38                              29
  CLUS_2                            21                              75
  CLUS_3                            44                              57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(19Q13.43) MUTATED       27     34     21     15
  AMP PEAK 30(19Q13.43) WILD-TYPE     62     26     33     32
D30V2, multiclass
        clus
vv       AMP PEAK 30(19Q13.43) MUTATED AMP PEAK 30(19Q13.43) WILD-TYPE
  CLUS_1                            27                              62
  CLUS_2                            34                              26
  CLUS_3                            21                              33
  CLUS_4                            15                              32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 30(19Q13.43) MUTATED       19      7     16      2     10
  AMP PEAK 30(19Q13.43) WILD-TYPE     18     22     18      3      9
D30V3, multiclass
        clus
vv       AMP PEAK 30(19Q13.43) MUTATED AMP PEAK 30(19Q13.43) WILD-TYPE
  CLUS_1                            19                              18
  CLUS_2                             7                              22
  CLUS_3                            16                              18
  CLUS_4                             2                               3
  CLUS_5                            10                               9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(19Q13.43) MUTATED       20     12     14      8
  AMP PEAK 30(19Q13.43) WILD-TYPE     22     26     12     10
D30V4, multiclass
        clus
vv       AMP PEAK 30(19Q13.43) MUTATED AMP PEAK 30(19Q13.43) WILD-TYPE
  CLUS_1                            20                              22
  CLUS_2                            12                              26
  CLUS_3                            14                              12
  CLUS_4                             8                              10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q13.43) MUTATED       51     23     29
  AMP PEAK 30(19Q13.43) WILD-TYPE     67     49     44
D30V5, multiclass
        clus
vv       AMP PEAK 30(19Q13.43) MUTATED AMP PEAK 30(19Q13.43) WILD-TYPE
  CLUS_1                            51                              67
  CLUS_2                            23                              49
  CLUS_3                            29                              44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(19Q13.43) MUTATED       40     17     24     22
  AMP PEAK 30(19Q13.43) WILD-TYPE     56     27     40     37
D30V6, multiclass
        clus
vv       AMP PEAK 30(19Q13.43) MUTATED AMP PEAK 30(19Q13.43) WILD-TYPE
  CLUS_1                            40                              56
  CLUS_2                            17                              27
  CLUS_3                            24                              40
  CLUS_4                            22                              37
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q13.43) MUTATED       26     47     30
  AMP PEAK 30(19Q13.43) WILD-TYPE     37     68     55
D30V7, multiclass
        clus
vv       AMP PEAK 30(19Q13.43) MUTATED AMP PEAK 30(19Q13.43) WILD-TYPE
  CLUS_1                            26                              37
  CLUS_2                            47                              68
  CLUS_3                            30                              55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 30(19Q13.43) MUTATED       22      7     19     13     18     12
  AMP PEAK 30(19Q13.43) WILD-TYPE     22     17     12     21     29     24
                                 vv
clus                              CLUS_7
  AMP PEAK 30(19Q13.43) MUTATED       12
  AMP PEAK 30(19Q13.43) WILD-TYPE     35
D30V8, multiclass
        clus
vv       AMP PEAK 30(19Q13.43) MUTATED AMP PEAK 30(19Q13.43) WILD-TYPE
  CLUS_1                            22                              22
  CLUS_2                             7                              17
  CLUS_3                            19                              12
  CLUS_4                            13                              21
  CLUS_5                            18                              29
  CLUS_6                            12                              24
  CLUS_7                            12                              35
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q13.43) MUTATED       22     38     43
  AMP PEAK 30(19Q13.43) WILD-TYPE     25     74     61
D30V9, multiclass
        clus
vv       AMP PEAK 30(19Q13.43) MUTATED AMP PEAK 30(19Q13.43) WILD-TYPE
  CLUS_1                            22                              25
  CLUS_2                            38                              74
  CLUS_3                            43                              61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q13.43) MUTATED       22     42     39
  AMP PEAK 30(19Q13.43) WILD-TYPE     21     90     49
D30V10, multiclass
        clus
vv       AMP PEAK 30(19Q13.43) MUTATED AMP PEAK 30(19Q13.43) WILD-TYPE
  CLUS_1                            22                              21
  CLUS_2                            42                              90
  CLUS_3                            39                              49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(31) Variable = AMP PEAK 31(20Q11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(20Q11.21) MUTATED       55     50     66
  AMP PEAK 31(20Q11.21) WILD-TYPE     12     46     35
D31V1, multiclass
        clus
vv       AMP PEAK 31(20Q11.21) MUTATED AMP PEAK 31(20Q11.21) WILD-TYPE
  CLUS_1                            55                              12
  CLUS_2                            50                              46
  CLUS_3                            66                              35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(20Q11.21) MUTATED       54     48     33     28
  AMP PEAK 31(20Q11.21) WILD-TYPE     35     12     21     19
D31V2, multiclass
        clus
vv       AMP PEAK 31(20Q11.21) MUTATED AMP PEAK 31(20Q11.21) WILD-TYPE
  CLUS_1                            54                              35
  CLUS_2                            48                              12
  CLUS_3                            33                              21
  CLUS_4                            28                              19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 31(20Q11.21) MUTATED       25     19     24      2     14
  AMP PEAK 31(20Q11.21) WILD-TYPE     12     10     10      3      5
D31V3, multiclass
        clus
vv       AMP PEAK 31(20Q11.21) MUTATED AMP PEAK 31(20Q11.21) WILD-TYPE
  CLUS_1                            25                              12
  CLUS_2                            19                              10
  CLUS_3                            24                              10
  CLUS_4                             2                               3
  CLUS_5                            14                               5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(20Q11.21) MUTATED       23     28     17     16
  AMP PEAK 31(20Q11.21) WILD-TYPE     19     10      9      2
D31V4, multiclass
        clus
vv       AMP PEAK 31(20Q11.21) MUTATED AMP PEAK 31(20Q11.21) WILD-TYPE
  CLUS_1                            23                              19
  CLUS_2                            28                              10
  CLUS_3                            17                               9
  CLUS_4                            16                               2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(20Q11.21) MUTATED       78     46     47
  AMP PEAK 31(20Q11.21) WILD-TYPE     40     26     26
D31V5, multiclass
        clus
vv       AMP PEAK 31(20Q11.21) MUTATED AMP PEAK 31(20Q11.21) WILD-TYPE
  CLUS_1                            78                              40
  CLUS_2                            46                              26
  CLUS_3                            47                              26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(20Q11.21) MUTATED       60     31     46     34
  AMP PEAK 31(20Q11.21) WILD-TYPE     36     13     18     25
D31V6, multiclass
        clus
vv       AMP PEAK 31(20Q11.21) MUTATED AMP PEAK 31(20Q11.21) WILD-TYPE
  CLUS_1                            60                              36
  CLUS_2                            31                              13
  CLUS_3                            46                              18
  CLUS_4                            34                              25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(20Q11.21) MUTATED       45     72     54
  AMP PEAK 31(20Q11.21) WILD-TYPE     18     43     31
D31V7, multiclass
        clus
vv       AMP PEAK 31(20Q11.21) MUTATED AMP PEAK 31(20Q11.21) WILD-TYPE
  CLUS_1                            45                              18
  CLUS_2                            72                              43
  CLUS_3                            54                              31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 31(20Q11.21) MUTATED       33     18     27     22     30     21
  AMP PEAK 31(20Q11.21) WILD-TYPE     11      6      4     12     17     15
                                 vv
clus                              CLUS_7
  AMP PEAK 31(20Q11.21) MUTATED       20
  AMP PEAK 31(20Q11.21) WILD-TYPE     27
D31V8, multiclass
        clus
vv       AMP PEAK 31(20Q11.21) MUTATED AMP PEAK 31(20Q11.21) WILD-TYPE
  CLUS_1                            33                              11
  CLUS_2                            18                               6
  CLUS_3                            27                               4
  CLUS_4                            22                              12
  CLUS_5                            30                              17
  CLUS_6                            21                              15
  CLUS_7                            20                              27
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(20Q11.21) MUTATED       35     70     66
  AMP PEAK 31(20Q11.21) WILD-TYPE     12     42     38
D31V9, multiclass
        clus
vv       AMP PEAK 31(20Q11.21) MUTATED AMP PEAK 31(20Q11.21) WILD-TYPE
  CLUS_1                            35                              12
  CLUS_2                            70                              42
  CLUS_3                            66                              38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(20Q11.21) MUTATED       31     83     57
  AMP PEAK 31(20Q11.21) WILD-TYPE     12     49     31
D31V10, multiclass
        clus
vv       AMP PEAK 31(20Q11.21) MUTATED AMP PEAK 31(20Q11.21) WILD-TYPE
  CLUS_1                            31                              12
  CLUS_2                            83                              49
  CLUS_3                            57                              31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(32) Variable = AMP PEAK 32(22Q11.23) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(22Q11.23) MUTATED       24     10     21
  AMP PEAK 32(22Q11.23) WILD-TYPE     43     86     80
D32V1, multiclass
        clus
vv       AMP PEAK 32(22Q11.23) MUTATED AMP PEAK 32(22Q11.23) WILD-TYPE
  CLUS_1                            24                              43
  CLUS_2                            10                              86
  CLUS_3                            21                              80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 32(22Q11.23) MUTATED       12     17     16      7
  AMP PEAK 32(22Q11.23) WILD-TYPE     77     43     38     40
D32V2, multiclass
        clus
vv       AMP PEAK 32(22Q11.23) MUTATED AMP PEAK 32(22Q11.23) WILD-TYPE
  CLUS_1                            12                              77
  CLUS_2                            17                              43
  CLUS_3                            16                              38
  CLUS_4                             7                              40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 32(22Q11.23) MUTATED       10      5     11      1      3
  AMP PEAK 32(22Q11.23) WILD-TYPE     27     24     23      4     16
D32V3, multiclass
        clus
vv       AMP PEAK 32(22Q11.23) MUTATED AMP PEAK 32(22Q11.23) WILD-TYPE
  CLUS_1                            10                              27
  CLUS_2                             5                              24
  CLUS_3                            11                              23
  CLUS_4                             1                               4
  CLUS_5                             3                              16
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 32(22Q11.23) MUTATED       13      9      5      3
  AMP PEAK 32(22Q11.23) WILD-TYPE     29     29     21     15
D32V4, multiclass
        clus
vv       AMP PEAK 32(22Q11.23) MUTATED AMP PEAK 32(22Q11.23) WILD-TYPE
  CLUS_1                            13                              29
  CLUS_2                             9                              29
  CLUS_3                             5                              21
  CLUS_4                             3                              15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(22Q11.23) MUTATED       33     13      9
  AMP PEAK 32(22Q11.23) WILD-TYPE     85     59     64
D32V5, multiclass
        clus
vv       AMP PEAK 32(22Q11.23) MUTATED AMP PEAK 32(22Q11.23) WILD-TYPE
  CLUS_1                            33                              85
  CLUS_2                            13                              59
  CLUS_3                             9                              64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 32(22Q11.23) MUTATED       24      9     16      6
  AMP PEAK 32(22Q11.23) WILD-TYPE     72     35     48     53
D32V6, multiclass
        clus
vv       AMP PEAK 32(22Q11.23) MUTATED AMP PEAK 32(22Q11.23) WILD-TYPE
  CLUS_1                            24                              72
  CLUS_2                             9                              35
  CLUS_3                            16                              48
  CLUS_4                             6                              53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(22Q11.23) MUTATED       15     28     12
  AMP PEAK 32(22Q11.23) WILD-TYPE     48     87     73
D32V7, multiclass
        clus
vv       AMP PEAK 32(22Q11.23) MUTATED AMP PEAK 32(22Q11.23) WILD-TYPE
  CLUS_1                            15                              48
  CLUS_2                            28                              87
  CLUS_3                            12                              73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 32(22Q11.23) MUTATED       11      5     12      6      7      7
  AMP PEAK 32(22Q11.23) WILD-TYPE     33     19     19     28     40     29
                                 vv
clus                              CLUS_7
  AMP PEAK 32(22Q11.23) MUTATED        7
  AMP PEAK 32(22Q11.23) WILD-TYPE     40
D32V8, multiclass
        clus
vv       AMP PEAK 32(22Q11.23) MUTATED AMP PEAK 32(22Q11.23) WILD-TYPE
  CLUS_1                            11                              33
  CLUS_2                             5                              19
  CLUS_3                            12                              19
  CLUS_4                             6                              28
  CLUS_5                             7                              40
  CLUS_6                             7                              29
  CLUS_7                             7                              40
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(22Q11.23) MUTATED       13     21     21
  AMP PEAK 32(22Q11.23) WILD-TYPE     34     91     83
D32V9, multiclass
        clus
vv       AMP PEAK 32(22Q11.23) MUTATED AMP PEAK 32(22Q11.23) WILD-TYPE
  CLUS_1                            13                              34
  CLUS_2                            21                              91
  CLUS_3                            21                              83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(22Q11.23) MUTATED       11     24     20
  AMP PEAK 32(22Q11.23) WILD-TYPE     32    108     68
D32V10, multiclass
        clus
vv       AMP PEAK 32(22Q11.23) MUTATED AMP PEAK 32(22Q11.23) WILD-TYPE
  CLUS_1                            11                              32
  CLUS_2                            24                             108
  CLUS_3                            20                              68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(33) Variable = DEL PEAK  1(1P36.11) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       11     17     24
  DEL PEAK  1(1P36.11) WILD-TYPE     56     79     77
D33V1, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           11                             56
  CLUS_2                           17                             79
  CLUS_3                           24                             77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.11) MUTATED       23      7      9     10
  DEL PEAK  1(1P36.11) WILD-TYPE     66     53     45     37
D33V2, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           23                             66
  CLUS_2                            7                             53
  CLUS_3                            9                             45
  CLUS_4                           10                             37
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.11) MUTATED        3      7      9      1      4
  DEL PEAK  1(1P36.11) WILD-TYPE     34     22     25      4     15
D33V3, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                            3                             34
  CLUS_2                            7                             22
  CLUS_3                            9                             25
  CLUS_4                            1                              4
  CLUS_5                            4                             15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.11) MUTATED        3      9      9      3
  DEL PEAK  1(1P36.11) WILD-TYPE     39     29     17     15
D33V4, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                            3                             39
  CLUS_2                            9                             29
  CLUS_3                            9                             17
  CLUS_4                            3                             15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       22     10     19
  DEL PEAK  1(1P36.11) WILD-TYPE     96     62     54
D33V5, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           22                             96
  CLUS_2                           10                             62
  CLUS_3                           19                             54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.11) MUTATED       16      8     12     15
  DEL PEAK  1(1P36.11) WILD-TYPE     80     36     52     44
D33V6, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           16                             80
  CLUS_2                            8                             36
  CLUS_3                           12                             52
  CLUS_4                           15                             44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       14     21     17
  DEL PEAK  1(1P36.11) WILD-TYPE     49     94     68
D33V7, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           14                             49
  CLUS_2                           21                             94
  CLUS_3                           17                             68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  1(1P36.11) MUTATED        9      7      6     10      7      8
  DEL PEAK  1(1P36.11) WILD-TYPE     35     17     25     24     40     28
                                vv
clus                             CLUS_7
  DEL PEAK  1(1P36.11) MUTATED        5
  DEL PEAK  1(1P36.11) WILD-TYPE     42
D33V8, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                            9                             35
  CLUS_2                            7                             17
  CLUS_3                            6                             25
  CLUS_4                           10                             24
  CLUS_5                            7                             40
  CLUS_6                            8                             28
  CLUS_7                            5                             42
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       10     25     17
  DEL PEAK  1(1P36.11) WILD-TYPE     37     87     87
D33V9, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           10                             37
  CLUS_2                           25                             87
  CLUS_3                           17                             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       10     29     13
  DEL PEAK  1(1P36.11) WILD-TYPE     33    103     75
D33V10, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           10                             33
  CLUS_2                           29                            103
  CLUS_3                           13                             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(34) Variable = DEL PEAK  2(1Q32.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1Q32.1) MUTATED       18     14     15
  DEL PEAK  2(1Q32.1) WILD-TYPE     49     82     86
D34V1, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          18                            49
  CLUS_2                          14                            82
  CLUS_3                          15                            86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1Q32.1) MUTATED       12     16      7     10
  DEL PEAK  2(1Q32.1) WILD-TYPE     77     44     47     37
D34V2, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          12                            77
  CLUS_2                          16                            44
  CLUS_3                           7                            47
  CLUS_4                          10                            37
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(1Q32.1) MUTATED        4      6      6      2      5
  DEL PEAK  2(1Q32.1) WILD-TYPE     33     23     28      3     14
D34V3, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                           4                            33
  CLUS_2                           6                            23
  CLUS_3                           6                            28
  CLUS_4                           2                             3
  CLUS_5                           5                            14
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1Q32.1) MUTATED        6      8      4      5
  DEL PEAK  2(1Q32.1) WILD-TYPE     36     30     22     13
D34V4, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                           6                            36
  CLUS_2                           8                            30
  CLUS_3                           4                            22
  CLUS_4                           5                            13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1Q32.1) MUTATED       25     12     10
  DEL PEAK  2(1Q32.1) WILD-TYPE     93     60     63
D34V5, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          25                            93
  CLUS_2                          12                            60
  CLUS_3                          10                            63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1Q32.1) MUTATED       21      5     15      6
  DEL PEAK  2(1Q32.1) WILD-TYPE     75     39     49     53
D34V6, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          21                            75
  CLUS_2                           5                            39
  CLUS_3                          15                            49
  CLUS_4                           6                            53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1Q32.1) MUTATED       16     20     11
  DEL PEAK  2(1Q32.1) WILD-TYPE     47     95     74
D34V7, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          16                            47
  CLUS_2                          20                            95
  CLUS_3                          11                            74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  2(1Q32.1) MUTATED       12      5     11      4      9      3
  DEL PEAK  2(1Q32.1) WILD-TYPE     32     19     20     30     38     33
                               vv
clus                            CLUS_7
  DEL PEAK  2(1Q32.1) MUTATED        3
  DEL PEAK  2(1Q32.1) WILD-TYPE     44
D34V8, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          12                            32
  CLUS_2                           5                            19
  CLUS_3                          11                            20
  CLUS_4                           4                            30
  CLUS_5                           9                            38
  CLUS_6                           3                            33
  CLUS_7                           3                            44
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1Q32.1) MUTATED       12     14     21
  DEL PEAK  2(1Q32.1) WILD-TYPE     35     98     83
D34V9, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          12                            35
  CLUS_2                          14                            98
  CLUS_3                          21                            83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1Q32.1) MUTATED       11     21     15
  DEL PEAK  2(1Q32.1) WILD-TYPE     32    111     73
D34V10, multiclass
        clus
vv       DEL PEAK  2(1Q32.1) MUTATED DEL PEAK  2(1Q32.1) WILD-TYPE
  CLUS_1                          11                            32
  CLUS_2                          21                           111
  CLUS_3                          15                            73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(35) Variable = DEL PEAK  3(2Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q22.1) MUTATED       31     21     28
  DEL PEAK  3(2Q22.1) WILD-TYPE     36     75     73
D35V1, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          31                            36
  CLUS_2                          21                            75
  CLUS_3                          28                            73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2Q22.1) MUTATED       21     26     16     15
  DEL PEAK  3(2Q22.1) WILD-TYPE     68     34     38     32
D35V2, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          21                            68
  CLUS_2                          26                            34
  CLUS_3                          16                            38
  CLUS_4                          15                            32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(2Q22.1) MUTATED       13      9      7      0      8
  DEL PEAK  3(2Q22.1) WILD-TYPE     24     20     27      5     11
D35V3, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          13                            24
  CLUS_2                           9                            20
  CLUS_3                           7                            27
  CLUS_4                           0                             5
  CLUS_5                           8                            11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2Q22.1) MUTATED       13     10      8      6
  DEL PEAK  3(2Q22.1) WILD-TYPE     29     28     18     12
D35V4, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          13                            29
  CLUS_2                          10                            28
  CLUS_3                           8                            18
  CLUS_4                           6                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q22.1) MUTATED       43     20     17
  DEL PEAK  3(2Q22.1) WILD-TYPE     75     52     56
D35V5, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          43                            75
  CLUS_2                          20                            52
  CLUS_3                          17                            56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2Q22.1) MUTATED       36     12     20     12
  DEL PEAK  3(2Q22.1) WILD-TYPE     60     32     44     47
D35V6, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          36                            60
  CLUS_2                          12                            32
  CLUS_3                          20                            44
  CLUS_4                          12                            47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q22.1) MUTATED       19     40     21
  DEL PEAK  3(2Q22.1) WILD-TYPE     44     75     64
D35V7, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          19                            44
  CLUS_2                          40                            75
  CLUS_3                          21                            64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  3(2Q22.1) MUTATED       18      3     12      9     13     12
  DEL PEAK  3(2Q22.1) WILD-TYPE     26     21     19     25     34     24
                               vv
clus                            CLUS_7
  DEL PEAK  3(2Q22.1) MUTATED       13
  DEL PEAK  3(2Q22.1) WILD-TYPE     34
D35V8, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          18                            26
  CLUS_2                           3                            21
  CLUS_3                          12                            19
  CLUS_4                           9                            25
  CLUS_5                          13                            34
  CLUS_6                          12                            24
  CLUS_7                          13                            34
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q22.1) MUTATED       12     29     39
  DEL PEAK  3(2Q22.1) WILD-TYPE     35     83     65
D35V9, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          12                            35
  CLUS_2                          29                            83
  CLUS_3                          39                            65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q22.1) MUTATED       15     35     30
  DEL PEAK  3(2Q22.1) WILD-TYPE     28     97     58
D35V10, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          15                            28
  CLUS_2                          35                            97
  CLUS_3                          30                            58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(36) Variable = DEL PEAK  4(2Q37.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.1) MUTATED       49     34     47
  DEL PEAK  4(2Q37.1) WILD-TYPE     18     62     54
D36V1, multiclass
        clus
vv       DEL PEAK  4(2Q37.1) MUTATED DEL PEAK  4(2Q37.1) WILD-TYPE
  CLUS_1                          49                            18
  CLUS_2                          34                            62
  CLUS_3                          47                            54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q37.1) MUTATED       33     37     32     24
  DEL PEAK  4(2Q37.1) WILD-TYPE     56     23     22     23
D36V2, multiclass
        clus
vv       DEL PEAK  4(2Q37.1) MUTATED DEL PEAK  4(2Q37.1) WILD-TYPE
  CLUS_1                          33                            56
  CLUS_2                          37                            23
  CLUS_3                          32                            22
  CLUS_4                          24                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(2Q37.1) MUTATED       21     13     18      1      9
  DEL PEAK  4(2Q37.1) WILD-TYPE     16     16     16      4     10
D36V3, multiclass
        clus
vv       DEL PEAK  4(2Q37.1) MUTATED DEL PEAK  4(2Q37.1) WILD-TYPE
  CLUS_1                          21                            16
  CLUS_2                          13                            16
  CLUS_3                          18                            16
  CLUS_4                           1                             4
  CLUS_5                           9                            10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q37.1) MUTATED       22     19     15      6
  DEL PEAK  4(2Q37.1) WILD-TYPE     20     19     11     12
D36V4, multiclass
        clus
vv       DEL PEAK  4(2Q37.1) MUTATED DEL PEAK  4(2Q37.1) WILD-TYPE
  CLUS_1                          22                            20
  CLUS_2                          19                            19
  CLUS_3                          15                            11
  CLUS_4                           6                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.1) MUTATED       64     33     32
  DEL PEAK  4(2Q37.1) WILD-TYPE     54     39     41
D36V5, multiclass
        clus
vv       DEL PEAK  4(2Q37.1) MUTATED DEL PEAK  4(2Q37.1) WILD-TYPE
  CLUS_1                          64                            54
  CLUS_2                          33                            39
  CLUS_3                          32                            41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q37.1) MUTATED       53     18     35     23
  DEL PEAK  4(2Q37.1) WILD-TYPE     43     26     29     36
D36V6, multiclass
        clus
vv       DEL PEAK  4(2Q37.1) MUTATED DEL PEAK  4(2Q37.1) WILD-TYPE
  CLUS_1                          53                            43
  CLUS_2                          18                            26
  CLUS_3                          35                            29
  CLUS_4                          23                            36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.1) MUTATED       39     54     37
  DEL PEAK  4(2Q37.1) WILD-TYPE     24     61     48
D36V7, multiclass
        clus
vv       DEL PEAK  4(2Q37.1) MUTATED DEL PEAK  4(2Q37.1) WILD-TYPE
  CLUS_1                          39                            24
  CLUS_2                          54                            61
  CLUS_3                          37                            48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  4(2Q37.1) MUTATED       31     12     17     15     21     15
  DEL PEAK  4(2Q37.1) WILD-TYPE     13     12     14     19     26     21
                               vv
clus                            CLUS_7
  DEL PEAK  4(2Q37.1) MUTATED       19
  DEL PEAK  4(2Q37.1) WILD-TYPE     28
D36V8, multiclass
        clus
vv       DEL PEAK  4(2Q37.1) MUTATED DEL PEAK  4(2Q37.1) WILD-TYPE
  CLUS_1                          31                            13
  CLUS_2                          12                            12
  CLUS_3                          17                            14
  CLUS_4                          15                            19
  CLUS_5                          21                            26
  CLUS_6                          15                            21
  CLUS_7                          19                            28
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.1) MUTATED       28     47     55
  DEL PEAK  4(2Q37.1) WILD-TYPE     19     65     49
D36V9, multiclass
        clus
vv       DEL PEAK  4(2Q37.1) MUTATED DEL PEAK  4(2Q37.1) WILD-TYPE
  CLUS_1                          28                            19
  CLUS_2                          47                            65
  CLUS_3                          55                            49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.1) MUTATED       28     59     43
  DEL PEAK  4(2Q37.1) WILD-TYPE     15     73     45
D36V10, multiclass
        clus
vv       DEL PEAK  4(2Q37.1) MUTATED DEL PEAK  4(2Q37.1) WILD-TYPE
  CLUS_1                          28                            15
  CLUS_2                          59                            73
  CLUS_3                          43                            45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(37) Variable = DEL PEAK  5(3P21.31) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P21.31) MUTATED       19     20     38
  DEL PEAK  5(3P21.31) WILD-TYPE     48     76     63
D37V1, multiclass
        clus
vv       DEL PEAK  5(3P21.31) MUTATED DEL PEAK  5(3P21.31) WILD-TYPE
  CLUS_1                           19                             48
  CLUS_2                           20                             76
  CLUS_3                           38                             63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(3P21.31) MUTATED       31     13     15     13
  DEL PEAK  5(3P21.31) WILD-TYPE     58     47     39     34
D37V2, multiclass
        clus
vv       DEL PEAK  5(3P21.31) MUTATED DEL PEAK  5(3P21.31) WILD-TYPE
  CLUS_1                           31                             58
  CLUS_2                           13                             47
  CLUS_3                           15                             39
  CLUS_4                           13                             34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(3P21.31) MUTATED        8      6     17      1      9
  DEL PEAK  5(3P21.31) WILD-TYPE     29     23     17      4     10
D37V3, multiclass
        clus
vv       DEL PEAK  5(3P21.31) MUTATED DEL PEAK  5(3P21.31) WILD-TYPE
  CLUS_1                            8                             29
  CLUS_2                            6                             23
  CLUS_3                           17                             17
  CLUS_4                            1                              4
  CLUS_5                            9                             10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(3P21.31) MUTATED        8     10     13     10
  DEL PEAK  5(3P21.31) WILD-TYPE     34     28     13      8
D37V4, multiclass
        clus
vv       DEL PEAK  5(3P21.31) MUTATED DEL PEAK  5(3P21.31) WILD-TYPE
  CLUS_1                            8                             34
  CLUS_2                           10                             28
  CLUS_3                           13                             13
  CLUS_4                           10                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P21.31) MUTATED       27     12     38
  DEL PEAK  5(3P21.31) WILD-TYPE     91     60     35
D37V5, multiclass
        clus
vv       DEL PEAK  5(3P21.31) MUTATED DEL PEAK  5(3P21.31) WILD-TYPE
  CLUS_1                           27                             91
  CLUS_2                           12                             60
  CLUS_3                           38                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(3P21.31) MUTATED       21      9     14     33
  DEL PEAK  5(3P21.31) WILD-TYPE     75     35     50     26
D37V6, multiclass
        clus
vv       DEL PEAK  5(3P21.31) MUTATED DEL PEAK  5(3P21.31) WILD-TYPE
  CLUS_1                           21                             75
  CLUS_2                            9                             35
  CLUS_3                           14                             50
  CLUS_4                           33                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P21.31) MUTATED       12     36     29
  DEL PEAK  5(3P21.31) WILD-TYPE     51     79     56
D37V7, multiclass
        clus
vv       DEL PEAK  5(3P21.31) MUTATED DEL PEAK  5(3P21.31) WILD-TYPE
  CLUS_1                           12                             51
  CLUS_2                           36                             79
  CLUS_3                           29                             56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  5(3P21.31) MUTATED        8      7     11     11     12     19
  DEL PEAK  5(3P21.31) WILD-TYPE     36     17     20     23     35     17
                                vv
clus                             CLUS_7
  DEL PEAK  5(3P21.31) MUTATED        9
  DEL PEAK  5(3P21.31) WILD-TYPE     38
D37V8, multiclass
        clus
vv       DEL PEAK  5(3P21.31) MUTATED DEL PEAK  5(3P21.31) WILD-TYPE
  CLUS_1                            8                             36
  CLUS_2                            7                             17
  CLUS_3                           11                             20
  CLUS_4                           11                             23
  CLUS_5                           12                             35
  CLUS_6                           19                             17
  CLUS_7                            9                             38
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P21.31) MUTATED        9     39     29
  DEL PEAK  5(3P21.31) WILD-TYPE     38     73     75
D37V9, multiclass
        clus
vv       DEL PEAK  5(3P21.31) MUTATED DEL PEAK  5(3P21.31) WILD-TYPE
  CLUS_1                            9                             38
  CLUS_2                           39                             73
  CLUS_3                           29                             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P21.31) MUTATED        8     47     22
  DEL PEAK  5(3P21.31) WILD-TYPE     35     85     66
D37V10, multiclass
        clus
vv       DEL PEAK  5(3P21.31) MUTATED DEL PEAK  5(3P21.31) WILD-TYPE
  CLUS_1                            8                             35
  CLUS_2                           47                             85
  CLUS_3                           22                             66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(38) Variable = DEL PEAK  6(3P14.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P14.2) MUTATED       23     19     33
  DEL PEAK  6(3P14.2) WILD-TYPE     44     77     68
D38V1, multiclass
        clus
vv       DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE
  CLUS_1                          23                            44
  CLUS_2                          19                            77
  CLUS_3                          33                            68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P14.2) MUTATED       30     16     15     10
  DEL PEAK  6(3P14.2) WILD-TYPE     59     44     39     37
D38V2, multiclass
        clus
vv       DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE
  CLUS_1                          30                            59
  CLUS_2                          16                            44
  CLUS_3                          15                            39
  CLUS_4                          10                            37
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(3P14.2) MUTATED        6      9     16      1      9
  DEL PEAK  6(3P14.2) WILD-TYPE     31     20     18      4     10
D38V3, multiclass
        clus
vv       DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE
  CLUS_1                           6                            31
  CLUS_2                           9                            20
  CLUS_3                          16                            18
  CLUS_4                           1                             4
  CLUS_5                           9                            10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P14.2) MUTATED        7     14     10     10
  DEL PEAK  6(3P14.2) WILD-TYPE     35     24     16      8
D38V4, multiclass
        clus
vv       DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE
  CLUS_1                           7                            35
  CLUS_2                          14                            24
  CLUS_3                          10                            16
  CLUS_4                          10                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P14.2) MUTATED       25     13     36
  DEL PEAK  6(3P14.2) WILD-TYPE     93     59     37
D38V5, multiclass
        clus
vv       DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE
  CLUS_1                          25                            93
  CLUS_2                          13                            59
  CLUS_3                          36                            37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P14.2) MUTATED       19      8     15     32
  DEL PEAK  6(3P14.2) WILD-TYPE     77     36     49     27
D38V6, multiclass
        clus
vv       DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE
  CLUS_1                          19                            77
  CLUS_2                           8                            36
  CLUS_3                          15                            49
  CLUS_4                          32                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P14.2) MUTATED       14     33     28
  DEL PEAK  6(3P14.2) WILD-TYPE     49     82     57
D38V7, multiclass
        clus
vv       DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE
  CLUS_1                          14                            49
  CLUS_2                          33                            82
  CLUS_3                          28                            57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  6(3P14.2) MUTATED        9      7     10     11     12     20
  DEL PEAK  6(3P14.2) WILD-TYPE     35     17     21     23     35     16
                               vv
clus                            CLUS_7
  DEL PEAK  6(3P14.2) MUTATED        6
  DEL PEAK  6(3P14.2) WILD-TYPE     41
D38V8, multiclass
        clus
vv       DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE
  CLUS_1                           9                            35
  CLUS_2                           7                            17
  CLUS_3                          10                            21
  CLUS_4                          11                            23
  CLUS_5                          12                            35
  CLUS_6                          20                            16
  CLUS_7                           6                            41
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P14.2) MUTATED       10     40     25
  DEL PEAK  6(3P14.2) WILD-TYPE     37     72     79
D38V9, multiclass
        clus
vv       DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE
  CLUS_1                          10                            37
  CLUS_2                          40                            72
  CLUS_3                          25                            79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P14.2) MUTATED        9     47     19
  DEL PEAK  6(3P14.2) WILD-TYPE     34     85     69
D38V10, multiclass
        clus
vv       DEL PEAK  6(3P14.2) MUTATED DEL PEAK  6(3P14.2) WILD-TYPE
  CLUS_1                           9                            34
  CLUS_2                          47                            85
  CLUS_3                          19                            69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(39) Variable = DEL PEAK  7(3P13) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED       20     21     30
  DEL PEAK  7(3P13) WILD-TYPE     47     75     71
D39V1, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        20                          47
  CLUS_2                        21                          75
  CLUS_3                        30                          71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P13) MUTATED       29     12     14     11
  DEL PEAK  7(3P13) WILD-TYPE     60     48     40     36
D39V2, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        29                          60
  CLUS_2                        12                          48
  CLUS_3                        14                          40
  CLUS_4                        11                          36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(3P13) MUTATED        6      9     14      2      8
  DEL PEAK  7(3P13) WILD-TYPE     31     20     20      3     11
D39V3, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                         6                          31
  CLUS_2                         9                          20
  CLUS_3                        14                          20
  CLUS_4                         2                           3
  CLUS_5                         8                          11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P13) MUTATED        5     15      9     10
  DEL PEAK  7(3P13) WILD-TYPE     37     23     17      8
D39V4, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                         5                          37
  CLUS_2                        15                          23
  CLUS_3                         9                          17
  CLUS_4                        10                           8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED       23     12     35
  DEL PEAK  7(3P13) WILD-TYPE     95     60     38
D39V5, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        23                          95
  CLUS_2                        12                          60
  CLUS_3                        35                          38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P13) MUTATED       18      8     14     30
  DEL PEAK  7(3P13) WILD-TYPE     78     36     50     29
D39V6, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        18                          78
  CLUS_2                         8                          36
  CLUS_3                        14                          50
  CLUS_4                        30                          29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED       14     31     26
  DEL PEAK  7(3P13) WILD-TYPE     49     84     59
D39V7, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        14                          49
  CLUS_2                        31                          84
  CLUS_3                        26                          59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK  7(3P13) MUTATED        8      8      9      9     13     17      7
  DEL PEAK  7(3P13) WILD-TYPE     36     16     22     25     34     19     40
D39V8, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                         8                          36
  CLUS_2                         8                          16
  CLUS_3                         9                          22
  CLUS_4                         9                          25
  CLUS_5                        13                          34
  CLUS_6                        17                          19
  CLUS_7                         7                          40
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED       10     37     24
  DEL PEAK  7(3P13) WILD-TYPE     37     75     80
D39V9, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        10                          37
  CLUS_2                        37                          75
  CLUS_3                        24                          80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED        8     46     17
  DEL PEAK  7(3P13) WILD-TYPE     35     86     71
D39V10, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                         8                          35
  CLUS_2                        46                          86
  CLUS_3                        17                          71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(40) Variable = DEL PEAK  8(4Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(4Q22.1) MUTATED       33     39     37
  DEL PEAK  8(4Q22.1) WILD-TYPE     34     57     64
D40V1, multiclass
        clus
vv       DEL PEAK  8(4Q22.1) MUTATED DEL PEAK  8(4Q22.1) WILD-TYPE
  CLUS_1                          33                            34
  CLUS_2                          39                            57
  CLUS_3                          37                            64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(4Q22.1) MUTATED       41     29     20     15
  DEL PEAK  8(4Q22.1) WILD-TYPE     48     31     34     32
D40V2, multiclass
        clus
vv       DEL PEAK  8(4Q22.1) MUTATED DEL PEAK  8(4Q22.1) WILD-TYPE
  CLUS_1                          41                            48
  CLUS_2                          29                            31
  CLUS_3                          20                            34
  CLUS_4                          15                            32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(4Q22.1) MUTATED       15     15     10      2      8
  DEL PEAK  8(4Q22.1) WILD-TYPE     22     14     24      3     11
D40V3, multiclass
        clus
vv       DEL PEAK  8(4Q22.1) MUTATED DEL PEAK  8(4Q22.1) WILD-TYPE
  CLUS_1                          15                            22
  CLUS_2                          15                            14
  CLUS_3                          10                            24
  CLUS_4                           2                             3
  CLUS_5                           8                            11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(4Q22.1) MUTATED       14     19     10      7
  DEL PEAK  8(4Q22.1) WILD-TYPE     28     19     16     11
D40V4, multiclass
        clus
vv       DEL PEAK  8(4Q22.1) MUTATED DEL PEAK  8(4Q22.1) WILD-TYPE
  CLUS_1                          14                            28
  CLUS_2                          19                            19
  CLUS_3                          10                            16
  CLUS_4                           7                            11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(4Q22.1) MUTATED       40     35     33
  DEL PEAK  8(4Q22.1) WILD-TYPE     78     37     40
D40V5, multiclass
        clus
vv       DEL PEAK  8(4Q22.1) MUTATED DEL PEAK  8(4Q22.1) WILD-TYPE
  CLUS_1                          40                            78
  CLUS_2                          35                            37
  CLUS_3                          33                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(4Q22.1) MUTATED       30     19     33     26
  DEL PEAK  8(4Q22.1) WILD-TYPE     66     25     31     33
D40V6, multiclass
        clus
vv       DEL PEAK  8(4Q22.1) MUTATED DEL PEAK  8(4Q22.1) WILD-TYPE
  CLUS_1                          30                            66
  CLUS_2                          19                            25
  CLUS_3                          33                            31
  CLUS_4                          26                            33
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(4Q22.1) MUTATED       24     44     41
  DEL PEAK  8(4Q22.1) WILD-TYPE     39     71     44
D40V7, multiclass
        clus
vv       DEL PEAK  8(4Q22.1) MUTATED DEL PEAK  8(4Q22.1) WILD-TYPE
  CLUS_1                          24                            39
  CLUS_2                          44                            71
  CLUS_3                          41                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  8(4Q22.1) MUTATED       16      9     14     15     24     19
  DEL PEAK  8(4Q22.1) WILD-TYPE     28     15     17     19     23     17
                               vv
clus                            CLUS_7
  DEL PEAK  8(4Q22.1) MUTATED       12
  DEL PEAK  8(4Q22.1) WILD-TYPE     35
D40V8, multiclass
        clus
vv       DEL PEAK  8(4Q22.1) MUTATED DEL PEAK  8(4Q22.1) WILD-TYPE
  CLUS_1                          16                            28
  CLUS_2                           9                            15
  CLUS_3                          14                            17
  CLUS_4                          15                            19
  CLUS_5                          24                            23
  CLUS_6                          19                            17
  CLUS_7                          12                            35
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(4Q22.1) MUTATED       18     55     36
  DEL PEAK  8(4Q22.1) WILD-TYPE     29     57     68
D40V9, multiclass
        clus
vv       DEL PEAK  8(4Q22.1) MUTATED DEL PEAK  8(4Q22.1) WILD-TYPE
  CLUS_1                          18                            29
  CLUS_2                          55                            57
  CLUS_3                          36                            68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(4Q22.1) MUTATED       15     65     29
  DEL PEAK  8(4Q22.1) WILD-TYPE     28     67     59
D40V10, multiclass
        clus
vv       DEL PEAK  8(4Q22.1) MUTATED DEL PEAK  8(4Q22.1) WILD-TYPE
  CLUS_1                          15                            28
  CLUS_2                          65                            67
  CLUS_3                          29                            59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(41) Variable = DEL PEAK  9(4Q34.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(4Q34.2) MUTATED       40     42     37
  DEL PEAK  9(4Q34.2) WILD-TYPE     27     54     64
D41V1, multiclass
        clus
vv       DEL PEAK  9(4Q34.2) MUTATED DEL PEAK  9(4Q34.2) WILD-TYPE
  CLUS_1                          40                            27
  CLUS_2                          42                            54
  CLUS_3                          37                            64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(4Q34.2) MUTATED       39     33     21     20
  DEL PEAK  9(4Q34.2) WILD-TYPE     50     27     33     27
D41V2, multiclass
        clus
vv       DEL PEAK  9(4Q34.2) MUTATED DEL PEAK  9(4Q34.2) WILD-TYPE
  CLUS_1                          39                            50
  CLUS_2                          33                            27
  CLUS_3                          21                            33
  CLUS_4                          20                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(4Q34.2) MUTATED       17     14     11      1     10
  DEL PEAK  9(4Q34.2) WILD-TYPE     20     15     23      4      9
D41V3, multiclass
        clus
vv       DEL PEAK  9(4Q34.2) MUTATED DEL PEAK  9(4Q34.2) WILD-TYPE
  CLUS_1                          17                            20
  CLUS_2                          14                            15
  CLUS_3                          11                            23
  CLUS_4                           1                             4
  CLUS_5                          10                             9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(4Q34.2) MUTATED       18     18      9      8
  DEL PEAK  9(4Q34.2) WILD-TYPE     24     20     17     10
D41V4, multiclass
        clus
vv       DEL PEAK  9(4Q34.2) MUTATED DEL PEAK  9(4Q34.2) WILD-TYPE
  CLUS_1                          18                            24
  CLUS_2                          18                            20
  CLUS_3                           9                            17
  CLUS_4                           8                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(4Q34.2) MUTATED       50     33     35
  DEL PEAK  9(4Q34.2) WILD-TYPE     68     39     38
D41V5, multiclass
        clus
vv       DEL PEAK  9(4Q34.2) MUTATED DEL PEAK  9(4Q34.2) WILD-TYPE
  CLUS_1                          50                            68
  CLUS_2                          33                            39
  CLUS_3                          35                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(4Q34.2) MUTATED       40     18     34     26
  DEL PEAK  9(4Q34.2) WILD-TYPE     56     26     30     33
D41V6, multiclass
        clus
vv       DEL PEAK  9(4Q34.2) MUTATED DEL PEAK  9(4Q34.2) WILD-TYPE
  CLUS_1                          40                            56
  CLUS_2                          18                            26
  CLUS_3                          34                            30
  CLUS_4                          26                            33
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(4Q34.2) MUTATED       35     43     41
  DEL PEAK  9(4Q34.2) WILD-TYPE     28     72     44
D41V7, multiclass
        clus
vv       DEL PEAK  9(4Q34.2) MUTATED DEL PEAK  9(4Q34.2) WILD-TYPE
  CLUS_1                          35                            28
  CLUS_2                          43                            72
  CLUS_3                          41                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  9(4Q34.2) MUTATED       25     11     14     17     24     15
  DEL PEAK  9(4Q34.2) WILD-TYPE     19     13     17     17     23     21
                               vv
clus                            CLUS_7
  DEL PEAK  9(4Q34.2) MUTATED       13
  DEL PEAK  9(4Q34.2) WILD-TYPE     34
D41V8, multiclass
        clus
vv       DEL PEAK  9(4Q34.2) MUTATED DEL PEAK  9(4Q34.2) WILD-TYPE
  CLUS_1                          25                            19
  CLUS_2                          11                            13
  CLUS_3                          14                            17
  CLUS_4                          17                            17
  CLUS_5                          24                            23
  CLUS_6                          15                            21
  CLUS_7                          13                            34
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(4Q34.2) MUTATED       26     52     41
  DEL PEAK  9(4Q34.2) WILD-TYPE     21     60     63
D41V9, multiclass
        clus
vv       DEL PEAK  9(4Q34.2) MUTATED DEL PEAK  9(4Q34.2) WILD-TYPE
  CLUS_1                          26                            21
  CLUS_2                          52                            60
  CLUS_3                          41                            63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(4Q34.2) MUTATED       24     63     32
  DEL PEAK  9(4Q34.2) WILD-TYPE     19     69     56
D41V10, multiclass
        clus
vv       DEL PEAK  9(4Q34.2) MUTATED DEL PEAK  9(4Q34.2) WILD-TYPE
  CLUS_1                          24                            19
  CLUS_2                          63                            69
  CLUS_3                          32                            56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(42) Variable = DEL PEAK 10(5Q11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(5Q11.2) MUTATED       51     33     49
  DEL PEAK 10(5Q11.2) WILD-TYPE     16     63     52
D42V1, multiclass
        clus
vv       DEL PEAK 10(5Q11.2) MUTATED DEL PEAK 10(5Q11.2) WILD-TYPE
  CLUS_1                          51                            16
  CLUS_2                          33                            63
  CLUS_3                          49                            52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(5Q11.2) MUTATED       46     42     25     15
  DEL PEAK 10(5Q11.2) WILD-TYPE     43     18     29     32
D42V2, multiclass
        clus
vv       DEL PEAK 10(5Q11.2) MUTATED DEL PEAK 10(5Q11.2) WILD-TYPE
  CLUS_1                          46                            43
  CLUS_2                          42                            18
  CLUS_3                          25                            29
  CLUS_4                          15                            32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(5Q11.2) MUTATED       19     16     19      2     11
  DEL PEAK 10(5Q11.2) WILD-TYPE     18     13     15      3      8
D42V3, multiclass
        clus
vv       DEL PEAK 10(5Q11.2) MUTATED DEL PEAK 10(5Q11.2) WILD-TYPE
  CLUS_1                          19                            18
  CLUS_2                          16                            13
  CLUS_3                          19                            15
  CLUS_4                           2                             3
  CLUS_5                          11                             8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(5Q11.2) MUTATED       20     21     14     12
  DEL PEAK 10(5Q11.2) WILD-TYPE     22     17     12      6
D42V4, multiclass
        clus
vv       DEL PEAK 10(5Q11.2) MUTATED DEL PEAK 10(5Q11.2) WILD-TYPE
  CLUS_1                          20                            22
  CLUS_2                          21                            17
  CLUS_3                          14                            12
  CLUS_4                          12                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(5Q11.2) MUTATED       57     40     35
  DEL PEAK 10(5Q11.2) WILD-TYPE     61     32     38
D42V5, multiclass
        clus
vv       DEL PEAK 10(5Q11.2) MUTATED DEL PEAK 10(5Q11.2) WILD-TYPE
  CLUS_1                          57                            61
  CLUS_2                          40                            32
  CLUS_3                          35                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(5Q11.2) MUTATED       45     26     38     23
  DEL PEAK 10(5Q11.2) WILD-TYPE     51     18     26     36
D42V6, multiclass
        clus
vv       DEL PEAK 10(5Q11.2) MUTATED DEL PEAK 10(5Q11.2) WILD-TYPE
  CLUS_1                          45                            51
  CLUS_2                          26                            18
  CLUS_3                          38                            26
  CLUS_4                          23                            36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(5Q11.2) MUTATED       33     51     49
  DEL PEAK 10(5Q11.2) WILD-TYPE     30     64     36
D42V7, multiclass
        clus
vv       DEL PEAK 10(5Q11.2) MUTATED DEL PEAK 10(5Q11.2) WILD-TYPE
  CLUS_1                          33                            30
  CLUS_2                          51                            64
  CLUS_3                          49                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 10(5Q11.2) MUTATED       27      9     19     19     29     18
  DEL PEAK 10(5Q11.2) WILD-TYPE     17     15     12     15     18     18
                               vv
clus                            CLUS_7
  DEL PEAK 10(5Q11.2) MUTATED       12
  DEL PEAK 10(5Q11.2) WILD-TYPE     35
D42V8, multiclass
        clus
vv       DEL PEAK 10(5Q11.2) MUTATED DEL PEAK 10(5Q11.2) WILD-TYPE
  CLUS_1                          27                            17
  CLUS_2                           9                            15
  CLUS_3                          19                            12
  CLUS_4                          19                            15
  CLUS_5                          29                            18
  CLUS_6                          18                            18
  CLUS_7                          12                            35
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(5Q11.2) MUTATED       26     58     49
  DEL PEAK 10(5Q11.2) WILD-TYPE     21     54     55
D42V9, multiclass
        clus
vv       DEL PEAK 10(5Q11.2) MUTATED DEL PEAK 10(5Q11.2) WILD-TYPE
  CLUS_1                          26                            21
  CLUS_2                          58                            54
  CLUS_3                          49                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(5Q11.2) MUTATED       27     67     39
  DEL PEAK 10(5Q11.2) WILD-TYPE     16     65     49
D42V10, multiclass
        clus
vv       DEL PEAK 10(5Q11.2) MUTATED DEL PEAK 10(5Q11.2) WILD-TYPE
  CLUS_1                          27                            16
  CLUS_2                          67                            65
  CLUS_3                          39                            49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(43) Variable = DEL PEAK 11(5Q35.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(5Q35.1) MUTATED       45     30     51
  DEL PEAK 11(5Q35.1) WILD-TYPE     22     66     50
D43V1, multiclass
        clus
vv       DEL PEAK 11(5Q35.1) MUTATED DEL PEAK 11(5Q35.1) WILD-TYPE
  CLUS_1                          45                            22
  CLUS_2                          30                            66
  CLUS_3                          51                            50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(5Q35.1) MUTATED       38     42     27     13
  DEL PEAK 11(5Q35.1) WILD-TYPE     51     18     27     34
D43V2, multiclass
        clus
vv       DEL PEAK 11(5Q35.1) MUTATED DEL PEAK 11(5Q35.1) WILD-TYPE
  CLUS_1                          38                            51
  CLUS_2                          42                            18
  CLUS_3                          27                            27
  CLUS_4                          13                            34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(5Q35.1) MUTATED       22     14     15      1     10
  DEL PEAK 11(5Q35.1) WILD-TYPE     15     15     19      4      9
D43V3, multiclass
        clus
vv       DEL PEAK 11(5Q35.1) MUTATED DEL PEAK 11(5Q35.1) WILD-TYPE
  CLUS_1                          22                            15
  CLUS_2                          14                            15
  CLUS_3                          15                            19
  CLUS_4                           1                             4
  CLUS_5                          10                             9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(5Q35.1) MUTATED       24     19      9     10
  DEL PEAK 11(5Q35.1) WILD-TYPE     18     19     17      8
D43V4, multiclass
        clus
vv       DEL PEAK 11(5Q35.1) MUTATED DEL PEAK 11(5Q35.1) WILD-TYPE
  CLUS_1                          24                            18
  CLUS_2                          19                            19
  CLUS_3                           9                            17
  CLUS_4                          10                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(5Q35.1) MUTATED       59     36     30
  DEL PEAK 11(5Q35.1) WILD-TYPE     59     36     43
D43V5, multiclass
        clus
vv       DEL PEAK 11(5Q35.1) MUTATED DEL PEAK 11(5Q35.1) WILD-TYPE
  CLUS_1                          59                            59
  CLUS_2                          36                            36
  CLUS_3                          30                            43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(5Q35.1) MUTATED       45     19     39     22
  DEL PEAK 11(5Q35.1) WILD-TYPE     51     25     25     37
D43V6, multiclass
        clus
vv       DEL PEAK 11(5Q35.1) MUTATED DEL PEAK 11(5Q35.1) WILD-TYPE
  CLUS_1                          45                            51
  CLUS_2                          19                            25
  CLUS_3                          39                            25
  CLUS_4                          22                            37
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(5Q35.1) MUTATED       35     52     39
  DEL PEAK 11(5Q35.1) WILD-TYPE     28     63     46
D43V7, multiclass
        clus
vv       DEL PEAK 11(5Q35.1) MUTATED DEL PEAK 11(5Q35.1) WILD-TYPE
  CLUS_1                          35                            28
  CLUS_2                          52                            63
  CLUS_3                          39                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 11(5Q35.1) MUTATED       27     12     20     16     25     13
  DEL PEAK 11(5Q35.1) WILD-TYPE     17     12     11     18     22     23
                               vv
clus                            CLUS_7
  DEL PEAK 11(5Q35.1) MUTATED       13
  DEL PEAK 11(5Q35.1) WILD-TYPE     34
D43V8, multiclass
        clus
vv       DEL PEAK 11(5Q35.1) MUTATED DEL PEAK 11(5Q35.1) WILD-TYPE
  CLUS_1                          27                            17
  CLUS_2                          12                            12
  CLUS_3                          20                            11
  CLUS_4                          16                            18
  CLUS_5                          25                            22
  CLUS_6                          13                            23
  CLUS_7                          13                            34
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(5Q35.1) MUTATED       26     53     47
  DEL PEAK 11(5Q35.1) WILD-TYPE     21     59     57
D43V9, multiclass
        clus
vv       DEL PEAK 11(5Q35.1) MUTATED DEL PEAK 11(5Q35.1) WILD-TYPE
  CLUS_1                          26                            21
  CLUS_2                          53                            59
  CLUS_3                          47                            57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(5Q35.1) MUTATED       28     58     40
  DEL PEAK 11(5Q35.1) WILD-TYPE     15     74     48
D43V10, multiclass
        clus
vv       DEL PEAK 11(5Q35.1) MUTATED DEL PEAK 11(5Q35.1) WILD-TYPE
  CLUS_1                          28                            15
  CLUS_2                          58                            74
  CLUS_3                          40                            48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(44) Variable = DEL PEAK 12(6P25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(6P25.3) MUTATED       26     18     25
  DEL PEAK 12(6P25.3) WILD-TYPE     41     78     76
D44V1, multiclass
        clus
vv       DEL PEAK 12(6P25.3) MUTATED DEL PEAK 12(6P25.3) WILD-TYPE
  CLUS_1                          26                            41
  CLUS_2                          18                            78
  CLUS_3                          25                            76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(6P25.3) MUTATED       18     25     13     11
  DEL PEAK 12(6P25.3) WILD-TYPE     71     35     41     36
D44V2, multiclass
        clus
vv       DEL PEAK 12(6P25.3) MUTATED DEL PEAK 12(6P25.3) WILD-TYPE
  CLUS_1                          18                            71
  CLUS_2                          25                            35
  CLUS_3                          13                            41
  CLUS_4                          11                            36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(6P25.3) MUTATED       12      8     12      1      4
  DEL PEAK 12(6P25.3) WILD-TYPE     25     21     22      4     15
D44V3, multiclass
        clus
vv       DEL PEAK 12(6P25.3) MUTATED DEL PEAK 12(6P25.3) WILD-TYPE
  CLUS_1                          12                            25
  CLUS_2                           8                            21
  CLUS_3                          12                            22
  CLUS_4                           1                             4
  CLUS_5                           4                            15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(6P25.3) MUTATED       11     11      9      6
  DEL PEAK 12(6P25.3) WILD-TYPE     31     27     17     12
D44V4, multiclass
        clus
vv       DEL PEAK 12(6P25.3) MUTATED DEL PEAK 12(6P25.3) WILD-TYPE
  CLUS_1                          11                            31
  CLUS_2                          11                            27
  CLUS_3                           9                            17
  CLUS_4                           6                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(6P25.3) MUTATED       34     20     15
  DEL PEAK 12(6P25.3) WILD-TYPE     84     52     58
D44V5, multiclass
        clus
vv       DEL PEAK 12(6P25.3) MUTATED DEL PEAK 12(6P25.3) WILD-TYPE
  CLUS_1                          34                            84
  CLUS_2                          20                            52
  CLUS_3                          15                            58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(6P25.3) MUTATED       26     11     23      9
  DEL PEAK 12(6P25.3) WILD-TYPE     70     33     41     50
D44V6, multiclass
        clus
vv       DEL PEAK 12(6P25.3) MUTATED DEL PEAK 12(6P25.3) WILD-TYPE
  CLUS_1                          26                            70
  CLUS_2                          11                            33
  CLUS_3                          23                            41
  CLUS_4                           9                            50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(6P25.3) MUTATED       19     27     23
  DEL PEAK 12(6P25.3) WILD-TYPE     44     88     62
D44V7, multiclass
        clus
vv       DEL PEAK 12(6P25.3) MUTATED DEL PEAK 12(6P25.3) WILD-TYPE
  CLUS_1                          19                            44
  CLUS_2                          27                            88
  CLUS_3                          23                            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 12(6P25.3) MUTATED       14      5     11     10     15      7
  DEL PEAK 12(6P25.3) WILD-TYPE     30     19     20     24     32     29
                               vv
clus                            CLUS_7
  DEL PEAK 12(6P25.3) MUTATED        7
  DEL PEAK 12(6P25.3) WILD-TYPE     40
D44V8, multiclass
        clus
vv       DEL PEAK 12(6P25.3) MUTATED DEL PEAK 12(6P25.3) WILD-TYPE
  CLUS_1                          14                            30
  CLUS_2                           5                            19
  CLUS_3                          11                            20
  CLUS_4                          10                            24
  CLUS_5                          15                            32
  CLUS_6                           7                            29
  CLUS_7                           7                            40
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(6P25.3) MUTATED       13     30     26
  DEL PEAK 12(6P25.3) WILD-TYPE     34     82     78
D44V9, multiclass
        clus
vv       DEL PEAK 12(6P25.3) MUTATED DEL PEAK 12(6P25.3) WILD-TYPE
  CLUS_1                          13                            34
  CLUS_2                          30                            82
  CLUS_3                          26                            78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(6P25.3) MUTATED       14     32     23
  DEL PEAK 12(6P25.3) WILD-TYPE     29    100     65
D44V10, multiclass
        clus
vv       DEL PEAK 12(6P25.3) MUTATED DEL PEAK 12(6P25.3) WILD-TYPE
  CLUS_1                          14                            29
  CLUS_2                          32                           100
  CLUS_3                          23                            65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(45) Variable = DEL PEAK 13(6Q21) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(6Q21) MUTATED       43     19     55
  DEL PEAK 13(6Q21) WILD-TYPE     24     77     46
D45V1, multiclass
        clus
vv       DEL PEAK 13(6Q21) MUTATED DEL PEAK 13(6Q21) WILD-TYPE
  CLUS_1                        43                          24
  CLUS_2                        19                          77
  CLUS_3                        55                          46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(6Q21) MUTATED       30     34     28     19
  DEL PEAK 13(6Q21) WILD-TYPE     59     26     26     28
D45V2, multiclass
        clus
vv       DEL PEAK 13(6Q21) MUTATED DEL PEAK 13(6Q21) WILD-TYPE
  CLUS_1                        30                          59
  CLUS_2                        34                          26
  CLUS_3                        28                          26
  CLUS_4                        19                          28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(6Q21) MUTATED       17     13     16      2      6
  DEL PEAK 13(6Q21) WILD-TYPE     20     16     18      3     13
D45V3, multiclass
        clus
vv       DEL PEAK 13(6Q21) MUTATED DEL PEAK 13(6Q21) WILD-TYPE
  CLUS_1                        17                          20
  CLUS_2                        13                          16
  CLUS_3                        16                          18
  CLUS_4                         2                           3
  CLUS_5                         6                          13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(6Q21) MUTATED       20     19      8      7
  DEL PEAK 13(6Q21) WILD-TYPE     22     19     18     11
D45V4, multiclass
        clus
vv       DEL PEAK 13(6Q21) MUTATED DEL PEAK 13(6Q21) WILD-TYPE
  CLUS_1                        20                          22
  CLUS_2                        19                          19
  CLUS_3                         8                          18
  CLUS_4                         7                          11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(6Q21) MUTATED       53     34     29
  DEL PEAK 13(6Q21) WILD-TYPE     65     38     44
D45V5, multiclass
        clus
vv       DEL PEAK 13(6Q21) MUTATED DEL PEAK 13(6Q21) WILD-TYPE
  CLUS_1                        53                          65
  CLUS_2                        34                          38
  CLUS_3                        29                          44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(6Q21) MUTATED       45     17     35     19
  DEL PEAK 13(6Q21) WILD-TYPE     51     27     29     40
D45V6, multiclass
        clus
vv       DEL PEAK 13(6Q21) MUTATED DEL PEAK 13(6Q21) WILD-TYPE
  CLUS_1                        45                          51
  CLUS_2                        17                          27
  CLUS_3                        35                          29
  CLUS_4                        19                          40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(6Q21) MUTATED       33     47     37
  DEL PEAK 13(6Q21) WILD-TYPE     30     68     48
D45V7, multiclass
        clus
vv       DEL PEAK 13(6Q21) MUTATED DEL PEAK 13(6Q21) WILD-TYPE
  CLUS_1                        33                          30
  CLUS_2                        47                          68
  CLUS_3                        37                          48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 13(6Q21) MUTATED       25     11     20     15     23     12     11
  DEL PEAK 13(6Q21) WILD-TYPE     19     13     11     19     24     24     36
D45V8, multiclass
        clus
vv       DEL PEAK 13(6Q21) MUTATED DEL PEAK 13(6Q21) WILD-TYPE
  CLUS_1                        25                          19
  CLUS_2                        11                          13
  CLUS_3                        20                          11
  CLUS_4                        15                          19
  CLUS_5                        23                          24
  CLUS_6                        12                          24
  CLUS_7                        11                          36
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(6Q21) MUTATED       25     47     45
  DEL PEAK 13(6Q21) WILD-TYPE     22     65     59
D45V9, multiclass
        clus
vv       DEL PEAK 13(6Q21) MUTATED DEL PEAK 13(6Q21) WILD-TYPE
  CLUS_1                        25                          22
  CLUS_2                        47                          65
  CLUS_3                        45                          59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(6Q21) MUTATED       25     52     40
  DEL PEAK 13(6Q21) WILD-TYPE     18     80     48
D45V10, multiclass
        clus
vv       DEL PEAK 13(6Q21) MUTATED DEL PEAK 13(6Q21) WILD-TYPE
  CLUS_1                        25                          18
  CLUS_2                        52                          80
  CLUS_3                        40                          48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(46) Variable = DEL PEAK 14(6Q27) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(6Q27) MUTATED       44     25     50
  DEL PEAK 14(6Q27) WILD-TYPE     23     71     51
D46V1, multiclass
        clus
vv       DEL PEAK 14(6Q27) MUTATED DEL PEAK 14(6Q27) WILD-TYPE
  CLUS_1                        44                          23
  CLUS_2                        25                          71
  CLUS_3                        50                          51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(6Q27) MUTATED       30     36     26     21
  DEL PEAK 14(6Q27) WILD-TYPE     59     24     28     26
D46V2, multiclass
        clus
vv       DEL PEAK 14(6Q27) MUTATED DEL PEAK 14(6Q27) WILD-TYPE
  CLUS_1                        30                          59
  CLUS_2                        36                          24
  CLUS_3                        26                          28
  CLUS_4                        21                          26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(6Q27) MUTATED       19     10     16      2      7
  DEL PEAK 14(6Q27) WILD-TYPE     18     19     18      3     12
D46V3, multiclass
        clus
vv       DEL PEAK 14(6Q27) MUTATED DEL PEAK 14(6Q27) WILD-TYPE
  CLUS_1                        19                          18
  CLUS_2                        10                          19
  CLUS_3                        16                          18
  CLUS_4                         2                           3
  CLUS_5                         7                          12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(6Q27) MUTATED       20     19      8      7
  DEL PEAK 14(6Q27) WILD-TYPE     22     19     18     11
D46V4, multiclass
        clus
vv       DEL PEAK 14(6Q27) MUTATED DEL PEAK 14(6Q27) WILD-TYPE
  CLUS_1                        20                          22
  CLUS_2                        19                          19
  CLUS_3                         8                          18
  CLUS_4                         7                          11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(6Q27) MUTATED       58     34     27
  DEL PEAK 14(6Q27) WILD-TYPE     60     38     46
D46V5, multiclass
        clus
vv       DEL PEAK 14(6Q27) MUTATED DEL PEAK 14(6Q27) WILD-TYPE
  CLUS_1                        58                          60
  CLUS_2                        34                          38
  CLUS_3                        27                          46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(6Q27) MUTATED       44     17     39     19
  DEL PEAK 14(6Q27) WILD-TYPE     52     27     25     40
D46V6, multiclass
        clus
vv       DEL PEAK 14(6Q27) MUTATED DEL PEAK 14(6Q27) WILD-TYPE
  CLUS_1                        44                          52
  CLUS_2                        17                          27
  CLUS_3                        39                          25
  CLUS_4                        19                          40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(6Q27) MUTATED       35     44     40
  DEL PEAK 14(6Q27) WILD-TYPE     28     71     45
D46V7, multiclass
        clus
vv       DEL PEAK 14(6Q27) MUTATED DEL PEAK 14(6Q27) WILD-TYPE
  CLUS_1                        35                          28
  CLUS_2                        44                          71
  CLUS_3                        40                          45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 14(6Q27) MUTATED       26     13     21     17     23     10      9
  DEL PEAK 14(6Q27) WILD-TYPE     18     11     10     17     24     26     38
D46V8, multiclass
        clus
vv       DEL PEAK 14(6Q27) MUTATED DEL PEAK 14(6Q27) WILD-TYPE
  CLUS_1                        26                          18
  CLUS_2                        13                          11
  CLUS_3                        21                          10
  CLUS_4                        17                          17
  CLUS_5                        23                          24
  CLUS_6                        10                          26
  CLUS_7                         9                          38
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(6Q27) MUTATED       27     49     43
  DEL PEAK 14(6Q27) WILD-TYPE     20     63     61
D46V9, multiclass
        clus
vv       DEL PEAK 14(6Q27) MUTATED DEL PEAK 14(6Q27) WILD-TYPE
  CLUS_1                        27                          20
  CLUS_2                        49                          63
  CLUS_3                        43                          61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(6Q27) MUTATED       26     53     40
  DEL PEAK 14(6Q27) WILD-TYPE     17     79     48
D46V10, multiclass
        clus
vv       DEL PEAK 14(6Q27) MUTATED DEL PEAK 14(6Q27) WILD-TYPE
  CLUS_1                        26                          17
  CLUS_2                        53                          79
  CLUS_3                        40                          48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(47) Variable = DEL PEAK 15(7Q36.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(7Q36.3) MUTATED       13     12     14
  DEL PEAK 15(7Q36.3) WILD-TYPE     54     84     87
D47V1, multiclass
        clus
vv       DEL PEAK 15(7Q36.3) MUTATED DEL PEAK 15(7Q36.3) WILD-TYPE
  CLUS_1                          13                            54
  CLUS_2                          12                            84
  CLUS_3                          14                            87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(7Q36.3) MUTATED       13     13     10      2
  DEL PEAK 15(7Q36.3) WILD-TYPE     76     47     44     45
D47V2, multiclass
        clus
vv       DEL PEAK 15(7Q36.3) MUTATED DEL PEAK 15(7Q36.3) WILD-TYPE
  CLUS_1                          13                            76
  CLUS_2                          13                            47
  CLUS_3                          10                            44
  CLUS_4                           2                            45
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(7Q36.3) MUTATED        2      2      6      1      4
  DEL PEAK 15(7Q36.3) WILD-TYPE     35     27     28      4     15
D47V3, multiclass
        clus
vv       DEL PEAK 15(7Q36.3) MUTATED DEL PEAK 15(7Q36.3) WILD-TYPE
  CLUS_1                           2                            35
  CLUS_2                           2                            27
  CLUS_3                           6                            28
  CLUS_4                           1                             4
  CLUS_5                           4                            15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(7Q36.3) MUTATED        2      6      5      2
  DEL PEAK 15(7Q36.3) WILD-TYPE     40     32     21     16
D47V4, multiclass
        clus
vv       DEL PEAK 15(7Q36.3) MUTATED DEL PEAK 15(7Q36.3) WILD-TYPE
  CLUS_1                           2                            40
  CLUS_2                           6                            32
  CLUS_3                           5                            21
  CLUS_4                           2                            16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(7Q36.3) MUTATED       15      9     15
  DEL PEAK 15(7Q36.3) WILD-TYPE    103     63     58
D47V5, multiclass
        clus
vv       DEL PEAK 15(7Q36.3) MUTATED DEL PEAK 15(7Q36.3) WILD-TYPE
  CLUS_1                          15                           103
  CLUS_2                           9                            63
  CLUS_3                          15                            58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(7Q36.3) MUTATED       12      6      8     13
  DEL PEAK 15(7Q36.3) WILD-TYPE     84     38     56     46
D47V6, multiclass
        clus
vv       DEL PEAK 15(7Q36.3) MUTATED DEL PEAK 15(7Q36.3) WILD-TYPE
  CLUS_1                          12                            84
  CLUS_2                           6                            38
  CLUS_3                           8                            56
  CLUS_4                          13                            46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(7Q36.3) MUTATED       11     15     13
  DEL PEAK 15(7Q36.3) WILD-TYPE     52    100     72
D47V7, multiclass
        clus
vv       DEL PEAK 15(7Q36.3) MUTATED DEL PEAK 15(7Q36.3) WILD-TYPE
  CLUS_1                          11                            52
  CLUS_2                          15                           100
  CLUS_3                          13                            72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 15(7Q36.3) MUTATED        8      6      8      5      4      7
  DEL PEAK 15(7Q36.3) WILD-TYPE     36     18     23     29     43     29
                               vv
clus                            CLUS_7
  DEL PEAK 15(7Q36.3) MUTATED        1
  DEL PEAK 15(7Q36.3) WILD-TYPE     46
D47V8, multiclass
        clus
vv       DEL PEAK 15(7Q36.3) MUTATED DEL PEAK 15(7Q36.3) WILD-TYPE
  CLUS_1                           8                            36
  CLUS_2                           6                            18
  CLUS_3                           8                            23
  CLUS_4                           5                            29
  CLUS_5                           4                            43
  CLUS_6                           7                            29
  CLUS_7                           1                            46
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(7Q36.3) MUTATED        7     17     15
  DEL PEAK 15(7Q36.3) WILD-TYPE     40     95     89
D47V9, multiclass
        clus
vv       DEL PEAK 15(7Q36.3) MUTATED DEL PEAK 15(7Q36.3) WILD-TYPE
  CLUS_1                           7                            40
  CLUS_2                          17                            95
  CLUS_3                          15                            89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(7Q36.3) MUTATED        7     20     12
  DEL PEAK 15(7Q36.3) WILD-TYPE     36    112     76
D47V10, multiclass
        clus
vv       DEL PEAK 15(7Q36.3) MUTATED DEL PEAK 15(7Q36.3) WILD-TYPE
  CLUS_1                           7                            36
  CLUS_2                          20                           112
  CLUS_3                          12                            76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(48) Variable = DEL PEAK 16(8P23.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(8P23.3) MUTATED       56     54     41
  DEL PEAK 16(8P23.3) WILD-TYPE     11     42     60
D48V1, multiclass
        clus
vv       DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE
  CLUS_1                          56                            11
  CLUS_2                          54                            42
  CLUS_3                          41                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(8P23.3) MUTATED       57     49     20     17
  DEL PEAK 16(8P23.3) WILD-TYPE     32     11     34     30
D48V2, multiclass
        clus
vv       DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE
  CLUS_1                          57                            32
  CLUS_2                          49                            11
  CLUS_3                          20                            34
  CLUS_4                          17                            30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(8P23.3) MUTATED       17     17     16      4     11
  DEL PEAK 16(8P23.3) WILD-TYPE     20     12     18      1      8
D48V3, multiclass
        clus
vv       DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE
  CLUS_1                          17                            20
  CLUS_2                          17                            12
  CLUS_3                          16                            18
  CLUS_4                           4                             1
  CLUS_5                          11                             8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(8P23.3) MUTATED       20     24     10     11
  DEL PEAK 16(8P23.3) WILD-TYPE     22     14     16      7
D48V4, multiclass
        clus
vv       DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE
  CLUS_1                          20                            22
  CLUS_2                          24                            14
  CLUS_3                          10                            16
  CLUS_4                          11                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(8P23.3) MUTATED       61     47     43
  DEL PEAK 16(8P23.3) WILD-TYPE     57     25     30
D48V5, multiclass
        clus
vv       DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE
  CLUS_1                          61                            57
  CLUS_2                          47                            25
  CLUS_3                          43                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(8P23.3) MUTATED       52     26     39     34
  DEL PEAK 16(8P23.3) WILD-TYPE     44     18     25     25
D48V6, multiclass
        clus
vv       DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE
  CLUS_1                          52                            44
  CLUS_2                          26                            18
  CLUS_3                          39                            25
  CLUS_4                          34                            25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(8P23.3) MUTATED       45     53     53
  DEL PEAK 16(8P23.3) WILD-TYPE     18     62     32
D48V7, multiclass
        clus
vv       DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE
  CLUS_1                          45                            18
  CLUS_2                          53                            62
  CLUS_3                          53                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 16(8P23.3) MUTATED       31     17     17     18     32     19
  DEL PEAK 16(8P23.3) WILD-TYPE     13      7     14     16     15     17
                               vv
clus                            CLUS_7
  DEL PEAK 16(8P23.3) MUTATED       17
  DEL PEAK 16(8P23.3) WILD-TYPE     30
D48V8, multiclass
        clus
vv       DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE
  CLUS_1                          31                            13
  CLUS_2                          17                             7
  CLUS_3                          17                            14
  CLUS_4                          18                            16
  CLUS_5                          32                            15
  CLUS_6                          19                            17
  CLUS_7                          17                            30
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(8P23.3) MUTATED       32     69     50
  DEL PEAK 16(8P23.3) WILD-TYPE     15     43     54
D48V9, multiclass
        clus
vv       DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE
  CLUS_1                          32                            15
  CLUS_2                          69                            43
  CLUS_3                          50                            54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(8P23.3) MUTATED       29     81     41
  DEL PEAK 16(8P23.3) WILD-TYPE     14     51     47
D48V10, multiclass
        clus
vv       DEL PEAK 16(8P23.3) MUTATED DEL PEAK 16(8P23.3) WILD-TYPE
  CLUS_1                          29                            14
  CLUS_2                          81                            51
  CLUS_3                          41                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(49) Variable = DEL PEAK 17(8P12) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(8P12) MUTATED       50     50     29
  DEL PEAK 17(8P12) WILD-TYPE     17     46     72
D49V1, multiclass
        clus
vv       DEL PEAK 17(8P12) MUTATED DEL PEAK 17(8P12) WILD-TYPE
  CLUS_1                        50                          17
  CLUS_2                        50                          46
  CLUS_3                        29                          72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(8P12) MUTATED       51     38     17     17
  DEL PEAK 17(8P12) WILD-TYPE     38     22     37     30
D49V2, multiclass
        clus
vv       DEL PEAK 17(8P12) MUTATED DEL PEAK 17(8P12) WILD-TYPE
  CLUS_1                        51                          38
  CLUS_2                        38                          22
  CLUS_3                        17                          37
  CLUS_4                        17                          30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(8P12) MUTATED       16     13     14      3     12
  DEL PEAK 17(8P12) WILD-TYPE     21     16     20      2      7
D49V3, multiclass
        clus
vv       DEL PEAK 17(8P12) MUTATED DEL PEAK 17(8P12) WILD-TYPE
  CLUS_1                        16                          21
  CLUS_2                        13                          16
  CLUS_3                        14                          20
  CLUS_4                         3                           2
  CLUS_5                        12                           7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(8P12) MUTATED       20     19      9     10
  DEL PEAK 17(8P12) WILD-TYPE     22     19     17      8
D49V4, multiclass
        clus
vv       DEL PEAK 17(8P12) MUTATED DEL PEAK 17(8P12) WILD-TYPE
  CLUS_1                        20                          22
  CLUS_2                        19                          19
  CLUS_3                         9                          17
  CLUS_4                        10                           8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(8P12) MUTATED       51     42     36
  DEL PEAK 17(8P12) WILD-TYPE     67     30     37
D49V5, multiclass
        clus
vv       DEL PEAK 17(8P12) MUTATED DEL PEAK 17(8P12) WILD-TYPE
  CLUS_1                        51                          67
  CLUS_2                        42                          30
  CLUS_3                        36                          37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(8P12) MUTATED       44     23     32     30
  DEL PEAK 17(8P12) WILD-TYPE     52     21     32     29
D49V6, multiclass
        clus
vv       DEL PEAK 17(8P12) MUTATED DEL PEAK 17(8P12) WILD-TYPE
  CLUS_1                        44                          52
  CLUS_2                        23                          21
  CLUS_3                        32                          32
  CLUS_4                        30                          29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(8P12) MUTATED       39     48     42
  DEL PEAK 17(8P12) WILD-TYPE     24     67     43
D49V7, multiclass
        clus
vv       DEL PEAK 17(8P12) MUTATED DEL PEAK 17(8P12) WILD-TYPE
  CLUS_1                        39                          24
  CLUS_2                        48                          67
  CLUS_3                        42                          43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 17(8P12) MUTATED       26     15     16     15     24     17     16
  DEL PEAK 17(8P12) WILD-TYPE     18      9     15     19     23     19     31
D49V8, multiclass
        clus
vv       DEL PEAK 17(8P12) MUTATED DEL PEAK 17(8P12) WILD-TYPE
  CLUS_1                        26                          18
  CLUS_2                        15                           9
  CLUS_3                        16                          15
  CLUS_4                        15                          19
  CLUS_5                        24                          23
  CLUS_6                        17                          19
  CLUS_7                        16                          31
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(8P12) MUTATED       28     57     44
  DEL PEAK 17(8P12) WILD-TYPE     19     55     60
D49V9, multiclass
        clus
vv       DEL PEAK 17(8P12) MUTATED DEL PEAK 17(8P12) WILD-TYPE
  CLUS_1                        28                          19
  CLUS_2                        57                          55
  CLUS_3                        44                          60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(8P12) MUTATED       26     68     35
  DEL PEAK 17(8P12) WILD-TYPE     17     64     53
D49V10, multiclass
        clus
vv       DEL PEAK 17(8P12) MUTATED DEL PEAK 17(8P12) WILD-TYPE
  CLUS_1                        26                          17
  CLUS_2                        68                          64
  CLUS_3                        35                          53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(50) Variable = DEL PEAK 18(8P11.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P11.21) MUTATED       23     34     12
  DEL PEAK 18(8P11.21) WILD-TYPE     44     62     89
D50V1, multiclass
        clus
vv       DEL PEAK 18(8P11.21) MUTATED DEL PEAK 18(8P11.21) WILD-TYPE
  CLUS_1                           23                             44
  CLUS_2                           34                             62
  CLUS_3                           12                             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(8P11.21) MUTATED       27     18     11     10
  DEL PEAK 18(8P11.21) WILD-TYPE     62     42     43     37
D50V2, multiclass
        clus
vv       DEL PEAK 18(8P11.21) MUTATED DEL PEAK 18(8P11.21) WILD-TYPE
  CLUS_1                           27                             62
  CLUS_2                           18                             42
  CLUS_3                           11                             43
  CLUS_4                           10                             37
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(8P11.21) MUTATED        6      8      7      3      6
  DEL PEAK 18(8P11.21) WILD-TYPE     31     21     27      2     13
D50V3, multiclass
        clus
vv       DEL PEAK 18(8P11.21) MUTATED DEL PEAK 18(8P11.21) WILD-TYPE
  CLUS_1                            6                             31
  CLUS_2                            8                             21
  CLUS_3                            7                             27
  CLUS_4                            3                              2
  CLUS_5                            6                             13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(8P11.21) MUTATED        8     11      4      7
  DEL PEAK 18(8P11.21) WILD-TYPE     34     27     22     11
D50V4, multiclass
        clus
vv       DEL PEAK 18(8P11.21) MUTATED DEL PEAK 18(8P11.21) WILD-TYPE
  CLUS_1                            8                             34
  CLUS_2                           11                             27
  CLUS_3                            4                             22
  CLUS_4                            7                             11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P11.21) MUTATED       26     24     19
  DEL PEAK 18(8P11.21) WILD-TYPE     92     48     54
D50V5, multiclass
        clus
vv       DEL PEAK 18(8P11.21) MUTATED DEL PEAK 18(8P11.21) WILD-TYPE
  CLUS_1                           26                             92
  CLUS_2                           24                             48
  CLUS_3                           19                             54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(8P11.21) MUTATED       19     13     21     16
  DEL PEAK 18(8P11.21) WILD-TYPE     77     31     43     43
D50V6, multiclass
        clus
vv       DEL PEAK 18(8P11.21) MUTATED DEL PEAK 18(8P11.21) WILD-TYPE
  CLUS_1                           19                             77
  CLUS_2                           13                             31
  CLUS_3                           21                             43
  CLUS_4                           16                             43
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P11.21) MUTATED       20     22     27
  DEL PEAK 18(8P11.21) WILD-TYPE     43     93     58
D50V7, multiclass
        clus
vv       DEL PEAK 18(8P11.21) MUTATED DEL PEAK 18(8P11.21) WILD-TYPE
  CLUS_1                           20                             43
  CLUS_2                           22                             93
  CLUS_3                           27                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 18(8P11.21) MUTATED       14      7      4      9     15     11
  DEL PEAK 18(8P11.21) WILD-TYPE     30     17     27     25     32     25
                                vv
clus                             CLUS_7
  DEL PEAK 18(8P11.21) MUTATED        9
  DEL PEAK 18(8P11.21) WILD-TYPE     38
D50V8, multiclass
        clus
vv       DEL PEAK 18(8P11.21) MUTATED DEL PEAK 18(8P11.21) WILD-TYPE
  CLUS_1                           14                             30
  CLUS_2                            7                             17
  CLUS_3                            4                             27
  CLUS_4                            9                             25
  CLUS_5                           15                             32
  CLUS_6                           11                             25
  CLUS_7                            9                             38
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P11.21) MUTATED       15     35     19
  DEL PEAK 18(8P11.21) WILD-TYPE     32     77     85
D50V9, multiclass
        clus
vv       DEL PEAK 18(8P11.21) MUTATED DEL PEAK 18(8P11.21) WILD-TYPE
  CLUS_1                           15                             32
  CLUS_2                           35                             77
  CLUS_3                           19                             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P11.21) MUTATED       13     41     15
  DEL PEAK 18(8P11.21) WILD-TYPE     30     91     73
D50V10, multiclass
        clus
vv       DEL PEAK 18(8P11.21) MUTATED DEL PEAK 18(8P11.21) WILD-TYPE
  CLUS_1                           13                             30
  CLUS_2                           41                             91
  CLUS_3                           15                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(51) Variable = DEL PEAK 19(9P23) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(9P23) MUTATED       24     19     72
  DEL PEAK 19(9P23) WILD-TYPE     43     77     29
D51V1, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        24                          43
  CLUS_2                        19                          77
  CLUS_3                        72                          29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(9P23) MUTATED       35     28     23     26
  DEL PEAK 19(9P23) WILD-TYPE     54     32     31     21
D51V2, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        35                          54
  CLUS_2                        28                          32
  CLUS_3                        23                          31
  CLUS_4                        26                          21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 19(9P23) MUTATED       21     13     14      4      6
  DEL PEAK 19(9P23) WILD-TYPE     16     16     20      1     13
D51V3, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        21                          16
  CLUS_2                        13                          16
  CLUS_3                        14                          20
  CLUS_4                         4                           1
  CLUS_5                         6                          13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(9P23) MUTATED       25     16      9      8
  DEL PEAK 19(9P23) WILD-TYPE     17     22     17     10
D51V4, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        25                          17
  CLUS_2                        16                          22
  CLUS_3                         9                          17
  CLUS_4                         8                          10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(9P23) MUTATED       52     33     30
  DEL PEAK 19(9P23) WILD-TYPE     66     39     43
D51V5, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        52                          66
  CLUS_2                        33                          39
  CLUS_3                        30                          43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(9P23) MUTATED       42     13     36     24
  DEL PEAK 19(9P23) WILD-TYPE     54     31     28     35
D51V6, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        42                          54
  CLUS_2                        13                          31
  CLUS_3                        36                          28
  CLUS_4                        24                          35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(9P23) MUTATED       29     45     41
  DEL PEAK 19(9P23) WILD-TYPE     34     70     44
D51V7, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        29                          34
  CLUS_2                        45                          70
  CLUS_3                        41                          44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 19(9P23) MUTATED       22     11     14     15     23     11     19
  DEL PEAK 19(9P23) WILD-TYPE     22     13     17     19     24     25     28
D51V8, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        22                          22
  CLUS_2                        11                          13
  CLUS_3                        14                          17
  CLUS_4                        15                          19
  CLUS_5                        23                          24
  CLUS_6                        11                          25
  CLUS_7                        19                          28
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(9P23) MUTATED       23     49     43
  DEL PEAK 19(9P23) WILD-TYPE     24     63     61
D51V9, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        23                          24
  CLUS_2                        49                          63
  CLUS_3                        43                          61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(9P23) MUTATED       21     58     36
  DEL PEAK 19(9P23) WILD-TYPE     22     74     52
D51V10, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        21                          22
  CLUS_2                        58                          74
  CLUS_3                        36                          52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(52) Variable = DEL PEAK 20(9P21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(9P21.3) MUTATED       32     37     88
  DEL PEAK 20(9P21.3) WILD-TYPE     35     59     13
D52V1, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          32                            35
  CLUS_2                          37                            59
  CLUS_3                          88                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(9P21.3) MUTATED       50     36     32     30
  DEL PEAK 20(9P21.3) WILD-TYPE     39     24     22     17
D52V2, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          50                            39
  CLUS_2                          36                            24
  CLUS_3                          32                            22
  CLUS_4                          30                            17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 20(9P21.3) MUTATED       26     15     19      4     13
  DEL PEAK 20(9P21.3) WILD-TYPE     11     14     15      1      6
D52V3, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          26                            11
  CLUS_2                          15                            14
  CLUS_3                          19                            15
  CLUS_4                           4                             1
  CLUS_5                          13                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(9P21.3) MUTATED       33     17     14     13
  DEL PEAK 20(9P21.3) WILD-TYPE      9     21     12      5
D52V4, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          33                             9
  CLUS_2                          17                            21
  CLUS_3                          14                            12
  CLUS_4                          13                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(9P21.3) MUTATED       71     40     45
  DEL PEAK 20(9P21.3) WILD-TYPE     47     32     28
D52V5, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          71                            47
  CLUS_2                          40                            32
  CLUS_3                          45                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(9P21.3) MUTATED       55     20     45     36
  DEL PEAK 20(9P21.3) WILD-TYPE     41     24     19     23
D52V6, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          55                            41
  CLUS_2                          20                            24
  CLUS_3                          45                            19
  CLUS_4                          36                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(9P21.3) MUTATED       36     68     52
  DEL PEAK 20(9P21.3) WILD-TYPE     27     47     33
D52V7, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          36                            27
  CLUS_2                          68                            47
  CLUS_3                          52                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 20(9P21.3) MUTATED       26     14     18     23     25     21
  DEL PEAK 20(9P21.3) WILD-TYPE     18     10     13     11     22     15
                               vv
clus                            CLUS_7
  DEL PEAK 20(9P21.3) MUTATED       29
  DEL PEAK 20(9P21.3) WILD-TYPE     18
D52V8, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          26                            18
  CLUS_2                          14                            10
  CLUS_3                          18                            13
  CLUS_4                          23                            11
  CLUS_5                          25                            22
  CLUS_6                          21                            15
  CLUS_7                          29                            18
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(9P21.3) MUTATED       28     70     58
  DEL PEAK 20(9P21.3) WILD-TYPE     19     42     46
D52V9, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          28                            19
  CLUS_2                          70                            42
  CLUS_3                          58                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(9P21.3) MUTATED       26     80     50
  DEL PEAK 20(9P21.3) WILD-TYPE     17     52     38
D52V10, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          26                            17
  CLUS_2                          80                            52
  CLUS_3                          50                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(53) Variable = DEL PEAK 21(9Q33.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9Q33.2) MUTATED       24     20     60
  DEL PEAK 21(9Q33.2) WILD-TYPE     43     76     41
D53V1, multiclass
        clus
vv       DEL PEAK 21(9Q33.2) MUTATED DEL PEAK 21(9Q33.2) WILD-TYPE
  CLUS_1                          24                            43
  CLUS_2                          20                            76
  CLUS_3                          60                            41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(9Q33.2) MUTATED       27     21     27     24
  DEL PEAK 21(9Q33.2) WILD-TYPE     62     39     27     23
D53V2, multiclass
        clus
vv       DEL PEAK 21(9Q33.2) MUTATED DEL PEAK 21(9Q33.2) WILD-TYPE
  CLUS_1                          27                            62
  CLUS_2                          21                            39
  CLUS_3                          27                            27
  CLUS_4                          24                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 21(9Q33.2) MUTATED       20     13     10      3      4
  DEL PEAK 21(9Q33.2) WILD-TYPE     17     16     24      2     15
D53V3, multiclass
        clus
vv       DEL PEAK 21(9Q33.2) MUTATED DEL PEAK 21(9Q33.2) WILD-TYPE
  CLUS_1                          20                            17
  CLUS_2                          13                            16
  CLUS_3                          10                            24
  CLUS_4                           3                             2
  CLUS_5                           4                            15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(9Q33.2) MUTATED       25     14      9      2
  DEL PEAK 21(9Q33.2) WILD-TYPE     17     24     17     16
D53V4, multiclass
        clus
vv       DEL PEAK 21(9Q33.2) MUTATED DEL PEAK 21(9Q33.2) WILD-TYPE
  CLUS_1                          25                            17
  CLUS_2                          14                            24
  CLUS_3                           9                            17
  CLUS_4                           2                            16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9Q33.2) MUTATED       58     25     21
  DEL PEAK 21(9Q33.2) WILD-TYPE     60     47     52
D53V5, multiclass
        clus
vv       DEL PEAK 21(9Q33.2) MUTATED DEL PEAK 21(9Q33.2) WILD-TYPE
  CLUS_1                          58                            60
  CLUS_2                          25                            47
  CLUS_3                          21                            52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(9Q33.2) MUTATED       43     12     36     13
  DEL PEAK 21(9Q33.2) WILD-TYPE     53     32     28     46
D53V6, multiclass
        clus
vv       DEL PEAK 21(9Q33.2) MUTATED DEL PEAK 21(9Q33.2) WILD-TYPE
  CLUS_1                          43                            53
  CLUS_2                          12                            32
  CLUS_3                          36                            28
  CLUS_4                          13                            46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9Q33.2) MUTATED       29     44     31
  DEL PEAK 21(9Q33.2) WILD-TYPE     34     71     54
D53V7, multiclass
        clus
vv       DEL PEAK 21(9Q33.2) MUTATED DEL PEAK 21(9Q33.2) WILD-TYPE
  CLUS_1                          29                            34
  CLUS_2                          44                            71
  CLUS_3                          31                            54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 21(9Q33.2) MUTATED       23      9     14     13     21      7
  DEL PEAK 21(9Q33.2) WILD-TYPE     21     15     17     21     26     29
                               vv
clus                            CLUS_7
  DEL PEAK 21(9Q33.2) MUTATED       17
  DEL PEAK 21(9Q33.2) WILD-TYPE     30
D53V8, multiclass
        clus
vv       DEL PEAK 21(9Q33.2) MUTATED DEL PEAK 21(9Q33.2) WILD-TYPE
  CLUS_1                          23                            21
  CLUS_2                           9                            15
  CLUS_3                          14                            17
  CLUS_4                          13                            21
  CLUS_5                          21                            26
  CLUS_6                           7                            29
  CLUS_7                          17                            30
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9Q33.2) MUTATED       24     38     42
  DEL PEAK 21(9Q33.2) WILD-TYPE     23     74     62
D53V9, multiclass
        clus
vv       DEL PEAK 21(9Q33.2) MUTATED DEL PEAK 21(9Q33.2) WILD-TYPE
  CLUS_1                          24                            23
  CLUS_2                          38                            74
  CLUS_3                          42                            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9Q33.2) MUTATED       24     43     37
  DEL PEAK 21(9Q33.2) WILD-TYPE     19     89     51
D53V10, multiclass
        clus
vv       DEL PEAK 21(9Q33.2) MUTATED DEL PEAK 21(9Q33.2) WILD-TYPE
  CLUS_1                          24                            19
  CLUS_2                          43                            89
  CLUS_3                          37                            51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(54) Variable = DEL PEAK 22(10P12.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(10P12.1) MUTATED       10     16     17
  DEL PEAK 22(10P12.1) WILD-TYPE     57     80     84
D54V1, multiclass
        clus
vv       DEL PEAK 22(10P12.1) MUTATED DEL PEAK 22(10P12.1) WILD-TYPE
  CLUS_1                           10                             57
  CLUS_2                           16                             80
  CLUS_3                           17                             84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(10P12.1) MUTATED       15     10     12      3
  DEL PEAK 22(10P12.1) WILD-TYPE     74     50     42     44
D54V2, multiclass
        clus
vv       DEL PEAK 22(10P12.1) MUTATED DEL PEAK 22(10P12.1) WILD-TYPE
  CLUS_1                           15                             74
  CLUS_2                           10                             50
  CLUS_3                           12                             42
  CLUS_4                            3                             44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 22(10P12.1) MUTATED        7      7      7      0      3
  DEL PEAK 22(10P12.1) WILD-TYPE     30     22     27      5     16
D54V3, multiclass
        clus
vv       DEL PEAK 22(10P12.1) MUTATED DEL PEAK 22(10P12.1) WILD-TYPE
  CLUS_1                            7                             30
  CLUS_2                            7                             22
  CLUS_3                            7                             27
  CLUS_4                            0                              5
  CLUS_5                            3                             16
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(10P12.1) MUTATED        6      6      7      5
  DEL PEAK 22(10P12.1) WILD-TYPE     36     32     19     13
D54V4, multiclass
        clus
vv       DEL PEAK 22(10P12.1) MUTATED DEL PEAK 22(10P12.1) WILD-TYPE
  CLUS_1                            6                             36
  CLUS_2                            6                             32
  CLUS_3                            7                             19
  CLUS_4                            5                             13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(10P12.1) MUTATED       18      6     19
  DEL PEAK 22(10P12.1) WILD-TYPE    100     66     54
D54V5, multiclass
        clus
vv       DEL PEAK 22(10P12.1) MUTATED DEL PEAK 22(10P12.1) WILD-TYPE
  CLUS_1                           18                            100
  CLUS_2                            6                             66
  CLUS_3                           19                             54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(10P12.1) MUTATED       16      6      5     16
  DEL PEAK 22(10P12.1) WILD-TYPE     80     38     59     43
D54V6, multiclass
        clus
vv       DEL PEAK 22(10P12.1) MUTATED DEL PEAK 22(10P12.1) WILD-TYPE
  CLUS_1                           16                             80
  CLUS_2                            6                             38
  CLUS_3                            5                             59
  CLUS_4                           16                             43
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(10P12.1) MUTATED       14     17     12
  DEL PEAK 22(10P12.1) WILD-TYPE     49     98     73
D54V7, multiclass
        clus
vv       DEL PEAK 22(10P12.1) MUTATED DEL PEAK 22(10P12.1) WILD-TYPE
  CLUS_1                           14                             49
  CLUS_2                           17                             98
  CLUS_3                           12                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 22(10P12.1) MUTATED       10      4      4      9      4      7
  DEL PEAK 22(10P12.1) WILD-TYPE     34     20     27     25     43     29
                                vv
clus                             CLUS_7
  DEL PEAK 22(10P12.1) MUTATED        5
  DEL PEAK 22(10P12.1) WILD-TYPE     42
D54V8, multiclass
        clus
vv       DEL PEAK 22(10P12.1) MUTATED DEL PEAK 22(10P12.1) WILD-TYPE
  CLUS_1                           10                             34
  CLUS_2                            4                             20
  CLUS_3                            4                             27
  CLUS_4                            9                             25
  CLUS_5                            4                             43
  CLUS_6                            7                             29
  CLUS_7                            5                             42
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(10P12.1) MUTATED       11     17     15
  DEL PEAK 22(10P12.1) WILD-TYPE     36     95     89
D54V9, multiclass
        clus
vv       DEL PEAK 22(10P12.1) MUTATED DEL PEAK 22(10P12.1) WILD-TYPE
  CLUS_1                           11                             36
  CLUS_2                           17                             95
  CLUS_3                           15                             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(10P12.1) MUTATED       10     20     13
  DEL PEAK 22(10P12.1) WILD-TYPE     33    112     75
D54V10, multiclass
        clus
vv       DEL PEAK 22(10P12.1) MUTATED DEL PEAK 22(10P12.1) WILD-TYPE
  CLUS_1                           10                             33
  CLUS_2                           20                            112
  CLUS_3                           13                             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(55) Variable = DEL PEAK 23(10Q23.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(10Q23.31) MUTATED       39     32     35
  DEL PEAK 23(10Q23.31) WILD-TYPE     28     64     66
D55V1, multiclass
        clus
vv       DEL PEAK 23(10Q23.31) MUTATED DEL PEAK 23(10Q23.31) WILD-TYPE
  CLUS_1                            39                              28
  CLUS_2                            32                              64
  CLUS_3                            35                              66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(10Q23.31) MUTATED       30     34     22     14
  DEL PEAK 23(10Q23.31) WILD-TYPE     59     26     32     33
D55V2, multiclass
        clus
vv       DEL PEAK 23(10Q23.31) MUTATED DEL PEAK 23(10Q23.31) WILD-TYPE
  CLUS_1                            30                              59
  CLUS_2                            34                              26
  CLUS_3                            22                              32
  CLUS_4                            14                              33
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 23(10Q23.31) MUTATED       14     13     12      1     10
  DEL PEAK 23(10Q23.31) WILD-TYPE     23     16     22      4      9
D55V3, multiclass
        clus
vv       DEL PEAK 23(10Q23.31) MUTATED DEL PEAK 23(10Q23.31) WILD-TYPE
  CLUS_1                            14                              23
  CLUS_2                            13                              16
  CLUS_3                            12                              22
  CLUS_4                             1                               4
  CLUS_5                            10                               9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(10Q23.31) MUTATED       14     17     10      9
  DEL PEAK 23(10Q23.31) WILD-TYPE     28     21     16      9
D55V4, multiclass
        clus
vv       DEL PEAK 23(10Q23.31) MUTATED DEL PEAK 23(10Q23.31) WILD-TYPE
  CLUS_1                            14                              28
  CLUS_2                            17                              21
  CLUS_3                            10                              16
  CLUS_4                             9                               9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(10Q23.31) MUTATED       55     22     28
  DEL PEAK 23(10Q23.31) WILD-TYPE     63     50     45
D55V5, multiclass
        clus
vv       DEL PEAK 23(10Q23.31) MUTATED DEL PEAK 23(10Q23.31) WILD-TYPE
  CLUS_1                            55                              63
  CLUS_2                            22                              50
  CLUS_3                            28                              45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(10Q23.31) MUTATED       43     15     25     22
  DEL PEAK 23(10Q23.31) WILD-TYPE     53     29     39     37
D55V6, multiclass
        clus
vv       DEL PEAK 23(10Q23.31) MUTATED DEL PEAK 23(10Q23.31) WILD-TYPE
  CLUS_1                            43                              53
  CLUS_2                            15                              29
  CLUS_3                            25                              39
  CLUS_4                            22                              37
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(10Q23.31) MUTATED       28     46     32
  DEL PEAK 23(10Q23.31) WILD-TYPE     35     69     53
D55V7, multiclass
        clus
vv       DEL PEAK 23(10Q23.31) MUTATED DEL PEAK 23(10Q23.31) WILD-TYPE
  CLUS_1                            28                              35
  CLUS_2                            46                              69
  CLUS_3                            32                              53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 23(10Q23.31) MUTATED       22     10     18     13     18     13
  DEL PEAK 23(10Q23.31) WILD-TYPE     22     14     13     21     29     23
                                 vv
clus                              CLUS_7
  DEL PEAK 23(10Q23.31) MUTATED       12
  DEL PEAK 23(10Q23.31) WILD-TYPE     35
D55V8, multiclass
        clus
vv       DEL PEAK 23(10Q23.31) MUTATED DEL PEAK 23(10Q23.31) WILD-TYPE
  CLUS_1                            22                              22
  CLUS_2                            10                              14
  CLUS_3                            18                              13
  CLUS_4                            13                              21
  CLUS_5                            18                              29
  CLUS_6                            13                              23
  CLUS_7                            12                              35
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(10Q23.31) MUTATED       21     42     43
  DEL PEAK 23(10Q23.31) WILD-TYPE     26     70     61
D55V9, multiclass
        clus
vv       DEL PEAK 23(10Q23.31) MUTATED DEL PEAK 23(10Q23.31) WILD-TYPE
  CLUS_1                            21                              26
  CLUS_2                            42                              70
  CLUS_3                            43                              61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(10Q23.31) MUTATED       21     49     36
  DEL PEAK 23(10Q23.31) WILD-TYPE     22     83     52
D55V10, multiclass
        clus
vv       DEL PEAK 23(10Q23.31) MUTATED DEL PEAK 23(10Q23.31) WILD-TYPE
  CLUS_1                            21                              22
  CLUS_2                            49                              83
  CLUS_3                            36                              52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(56) Variable = DEL PEAK 24(11P15.5) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(11P15.5) MUTATED       43     21     65
  DEL PEAK 24(11P15.5) WILD-TYPE     24     75     36
D56V1, multiclass
        clus
vv       DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE
  CLUS_1                           43                             24
  CLUS_2                           21                             75
  CLUS_3                           65                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(11P15.5) MUTATED       29     37     28     29
  DEL PEAK 24(11P15.5) WILD-TYPE     60     23     26     18
D56V2, multiclass
        clus
vv       DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE
  CLUS_1                           29                             60
  CLUS_2                           37                             23
  CLUS_3                           28                             26
  CLUS_4                           29                             18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 24(11P15.5) MUTATED       22     17     16      1      8
  DEL PEAK 24(11P15.5) WILD-TYPE     15     12     18      4     11
D56V3, multiclass
        clus
vv       DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE
  CLUS_1                           22                             15
  CLUS_2                           17                             12
  CLUS_3                           16                             18
  CLUS_4                            1                              4
  CLUS_5                            8                             11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(11P15.5) MUTATED       22     24     10      8
  DEL PEAK 24(11P15.5) WILD-TYPE     20     14     16     10
D56V4, multiclass
        clus
vv       DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE
  CLUS_1                           22                             20
  CLUS_2                           24                             14
  CLUS_3                           10                             16
  CLUS_4                            8                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(11P15.5) MUTATED       68     32     28
  DEL PEAK 24(11P15.5) WILD-TYPE     50     40     45
D56V5, multiclass
        clus
vv       DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE
  CLUS_1                           68                             50
  CLUS_2                           32                             40
  CLUS_3                           28                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(11P15.5) MUTATED       51     16     42     19
  DEL PEAK 24(11P15.5) WILD-TYPE     45     28     22     40
D56V6, multiclass
        clus
vv       DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE
  CLUS_1                           51                             45
  CLUS_2                           16                             28
  CLUS_3                           42                             22
  CLUS_4                           19                             40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(11P15.5) MUTATED       40     50     39
  DEL PEAK 24(11P15.5) WILD-TYPE     23     65     46
D56V7, multiclass
        clus
vv       DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE
  CLUS_1                           40                             23
  CLUS_2                           50                             65
  CLUS_3                           39                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 24(11P15.5) MUTATED       29     12     18     14     24     14
  DEL PEAK 24(11P15.5) WILD-TYPE     15     12     13     20     23     22
                                vv
clus                             CLUS_7
  DEL PEAK 24(11P15.5) MUTATED       18
  DEL PEAK 24(11P15.5) WILD-TYPE     29
D56V8, multiclass
        clus
vv       DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE
  CLUS_1                           29                             15
  CLUS_2                           12                             12
  CLUS_3                           18                             13
  CLUS_4                           14                             20
  CLUS_5                           24                             23
  CLUS_6                           14                             22
  CLUS_7                           18                             29
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(11P15.5) MUTATED       32     51     46
  DEL PEAK 24(11P15.5) WILD-TYPE     15     61     58
D56V9, multiclass
        clus
vv       DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE
  CLUS_1                           32                             15
  CLUS_2                           51                             61
  CLUS_3                           46                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(11P15.5) MUTATED       27     59     43
  DEL PEAK 24(11P15.5) WILD-TYPE     16     73     45
D56V10, multiclass
        clus
vv       DEL PEAK 24(11P15.5) MUTATED DEL PEAK 24(11P15.5) WILD-TYPE
  CLUS_1                           27                             16
  CLUS_2                           59                             73
  CLUS_3                           43                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(57) Variable = DEL PEAK 25(11Q23.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(11Q23.3) MUTATED       33     17     50
  DEL PEAK 25(11Q23.3) WILD-TYPE     34     79     51
D57V1, multiclass
        clus
vv       DEL PEAK 25(11Q23.3) MUTATED DEL PEAK 25(11Q23.3) WILD-TYPE
  CLUS_1                           33                             34
  CLUS_2                           17                             79
  CLUS_3                           50                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(11Q23.3) MUTATED       27     23     27     16
  DEL PEAK 25(11Q23.3) WILD-TYPE     62     37     27     31
D57V2, multiclass
        clus
vv       DEL PEAK 25(11Q23.3) MUTATED DEL PEAK 25(11Q23.3) WILD-TYPE
  CLUS_1                           27                             62
  CLUS_2                           23                             37
  CLUS_3                           27                             27
  CLUS_4                           16                             31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 25(11Q23.3) MUTATED       15      8     11      2      5
  DEL PEAK 25(11Q23.3) WILD-TYPE     22     21     23      3     14
D57V3, multiclass
        clus
vv       DEL PEAK 25(11Q23.3) MUTATED DEL PEAK 25(11Q23.3) WILD-TYPE
  CLUS_1                           15                             22
  CLUS_2                            8                             21
  CLUS_3                           11                             23
  CLUS_4                            2                              3
  CLUS_5                            5                             14
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(11Q23.3) MUTATED       16     11      8      6
  DEL PEAK 25(11Q23.3) WILD-TYPE     26     27     18     12
D57V4, multiclass
        clus
vv       DEL PEAK 25(11Q23.3) MUTATED DEL PEAK 25(11Q23.3) WILD-TYPE
  CLUS_1                           16                             26
  CLUS_2                           11                             27
  CLUS_3                            8                             18
  CLUS_4                            6                             12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(11Q23.3) MUTATED       51     18     30
  DEL PEAK 25(11Q23.3) WILD-TYPE     67     54     43
D57V5, multiclass
        clus
vv       DEL PEAK 25(11Q23.3) MUTATED DEL PEAK 25(11Q23.3) WILD-TYPE
  CLUS_1                           51                             67
  CLUS_2                           18                             54
  CLUS_3                           30                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(11Q23.3) MUTATED       44     12     19     24
  DEL PEAK 25(11Q23.3) WILD-TYPE     52     32     45     35
D57V6, multiclass
        clus
vv       DEL PEAK 25(11Q23.3) MUTATED DEL PEAK 25(11Q23.3) WILD-TYPE
  CLUS_1                           44                             52
  CLUS_2                           12                             32
  CLUS_3                           19                             45
  CLUS_4                           24                             35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(11Q23.3) MUTATED       23     50     27
  DEL PEAK 25(11Q23.3) WILD-TYPE     40     65     58
D57V7, multiclass
        clus
vv       DEL PEAK 25(11Q23.3) MUTATED DEL PEAK 25(11Q23.3) WILD-TYPE
  CLUS_1                           23                             40
  CLUS_2                           50                             65
  CLUS_3                           27                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 25(11Q23.3) MUTATED       17      8     16     12     16     14
  DEL PEAK 25(11Q23.3) WILD-TYPE     27     16     15     22     31     22
                                vv
clus                             CLUS_7
  DEL PEAK 25(11Q23.3) MUTATED       17
  DEL PEAK 25(11Q23.3) WILD-TYPE     30
D57V8, multiclass
        clus
vv       DEL PEAK 25(11Q23.3) MUTATED DEL PEAK 25(11Q23.3) WILD-TYPE
  CLUS_1                           17                             27
  CLUS_2                            8                             16
  CLUS_3                           16                             15
  CLUS_4                           12                             22
  CLUS_5                           16                             31
  CLUS_6                           14                             22
  CLUS_7                           17                             30
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(11Q23.3) MUTATED       21     37     42
  DEL PEAK 25(11Q23.3) WILD-TYPE     26     75     62
D57V9, multiclass
        clus
vv       DEL PEAK 25(11Q23.3) MUTATED DEL PEAK 25(11Q23.3) WILD-TYPE
  CLUS_1                           21                             26
  CLUS_2                           37                             75
  CLUS_3                           42                             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(11Q23.3) MUTATED       16     47     37
  DEL PEAK 25(11Q23.3) WILD-TYPE     27     85     51
D57V10, multiclass
        clus
vv       DEL PEAK 25(11Q23.3) MUTATED DEL PEAK 25(11Q23.3) WILD-TYPE
  CLUS_1                           16                             27
  CLUS_2                           47                             85
  CLUS_3                           37                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(58) Variable = DEL PEAK 26(13Q14.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(13Q14.2) MUTATED       40     30     33
  DEL PEAK 26(13Q14.2) WILD-TYPE     27     66     68
D58V1, multiclass
        clus
vv       DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE
  CLUS_1                           40                             27
  CLUS_2                           30                             66
  CLUS_3                           33                             68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(13Q14.2) MUTATED       35     26     24     15
  DEL PEAK 26(13Q14.2) WILD-TYPE     54     34     30     32
D58V2, multiclass
        clus
vv       DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE
  CLUS_1                           35                             54
  CLUS_2                           26                             34
  CLUS_3                           24                             30
  CLUS_4                           15                             32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 26(13Q14.2) MUTATED       10     13     22      1      5
  DEL PEAK 26(13Q14.2) WILD-TYPE     27     16     12      4     14
D58V3, multiclass
        clus
vv       DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE
  CLUS_1                           10                             27
  CLUS_2                           13                             16
  CLUS_3                           22                             12
  CLUS_4                            1                              4
  CLUS_5                            5                             14
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(13Q14.2) MUTATED       11     17     18      5
  DEL PEAK 26(13Q14.2) WILD-TYPE     31     21      8     13
D58V4, multiclass
        clus
vv       DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE
  CLUS_1                           11                             31
  CLUS_2                           17                             21
  CLUS_3                           18                              8
  CLUS_4                            5                             13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(13Q14.2) MUTATED       35     33     34
  DEL PEAK 26(13Q14.2) WILD-TYPE     83     39     39
D58V5, multiclass
        clus
vv       DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE
  CLUS_1                           35                             83
  CLUS_2                           33                             39
  CLUS_3                           34                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(13Q14.2) MUTATED       32     18     25     27
  DEL PEAK 26(13Q14.2) WILD-TYPE     64     26     39     32
D58V6, multiclass
        clus
vv       DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE
  CLUS_1                           32                             64
  CLUS_2                           18                             26
  CLUS_3                           25                             39
  CLUS_4                           27                             32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(13Q14.2) MUTATED       24     43     36
  DEL PEAK 26(13Q14.2) WILD-TYPE     39     72     49
D58V7, multiclass
        clus
vv       DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE
  CLUS_1                           24                             39
  CLUS_2                           43                             72
  CLUS_3                           36                             49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 26(13Q14.2) MUTATED       18     11     16     11     19     19
  DEL PEAK 26(13Q14.2) WILD-TYPE     26     13     15     23     28     17
                                vv
clus                             CLUS_7
  DEL PEAK 26(13Q14.2) MUTATED        9
  DEL PEAK 26(13Q14.2) WILD-TYPE     38
D58V8, multiclass
        clus
vv       DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE
  CLUS_1                           18                             26
  CLUS_2                           11                             13
  CLUS_3                           16                             15
  CLUS_4                           11                             23
  CLUS_5                           19                             28
  CLUS_6                           19                             17
  CLUS_7                            9                             38
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(13Q14.2) MUTATED       15     49     39
  DEL PEAK 26(13Q14.2) WILD-TYPE     32     63     65
D58V9, multiclass
        clus
vv       DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE
  CLUS_1                           15                             32
  CLUS_2                           49                             63
  CLUS_3                           39                             65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(13Q14.2) MUTATED       15     55     33
  DEL PEAK 26(13Q14.2) WILD-TYPE     28     77     55
D58V10, multiclass
        clus
vv       DEL PEAK 26(13Q14.2) MUTATED DEL PEAK 26(13Q14.2) WILD-TYPE
  CLUS_1                           15                             28
  CLUS_2                           55                             77
  CLUS_3                           33                             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(59) Variable = DEL PEAK 27(14Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(14Q12) MUTATED       33     12     35
  DEL PEAK 27(14Q12) WILD-TYPE     34     84     66
D59V1, multiclass
        clus
vv       DEL PEAK 27(14Q12) MUTATED DEL PEAK 27(14Q12) WILD-TYPE
  CLUS_1                         33                           34
  CLUS_2                         12                           84
  CLUS_3                         35                           66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(14Q12) MUTATED       26     31      8     14
  DEL PEAK 27(14Q12) WILD-TYPE     63     29     46     33
D59V2, multiclass
        clus
vv       DEL PEAK 27(14Q12) MUTATED DEL PEAK 27(14Q12) WILD-TYPE
  CLUS_1                         26                           63
  CLUS_2                         31                           29
  CLUS_3                          8                           46
  CLUS_4                         14                           33
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 27(14Q12) MUTATED       14      4      7      2      7
  DEL PEAK 27(14Q12) WILD-TYPE     23     25     27      3     12
D59V3, multiclass
        clus
vv       DEL PEAK 27(14Q12) MUTATED DEL PEAK 27(14Q12) WILD-TYPE
  CLUS_1                         14                           23
  CLUS_2                          4                           25
  CLUS_3                          7                           27
  CLUS_4                          2                            3
  CLUS_5                          7                           12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(14Q12) MUTATED       16      6      5      7
  DEL PEAK 27(14Q12) WILD-TYPE     26     32     21     11
D59V4, multiclass
        clus
vv       DEL PEAK 27(14Q12) MUTATED DEL PEAK 27(14Q12) WILD-TYPE
  CLUS_1                         16                           26
  CLUS_2                          6                           32
  CLUS_3                          5                           21
  CLUS_4                          7                           11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(14Q12) MUTATED       38     26     16
  DEL PEAK 27(14Q12) WILD-TYPE     80     46     57
D59V5, multiclass
        clus
vv       DEL PEAK 27(14Q12) MUTATED DEL PEAK 27(14Q12) WILD-TYPE
  CLUS_1                         38                           80
  CLUS_2                         26                           46
  CLUS_3                         16                           57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(14Q12) MUTATED       30     13     27     10
  DEL PEAK 27(14Q12) WILD-TYPE     66     31     37     49
D59V6, multiclass
        clus
vv       DEL PEAK 27(14Q12) MUTATED DEL PEAK 27(14Q12) WILD-TYPE
  CLUS_1                         30                           66
  CLUS_2                         13                           31
  CLUS_3                         27                           37
  CLUS_4                         10                           49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(14Q12) MUTATED       27     28     25
  DEL PEAK 27(14Q12) WILD-TYPE     36     87     60
D59V7, multiclass
        clus
vv       DEL PEAK 27(14Q12) MUTATED DEL PEAK 27(14Q12) WILD-TYPE
  CLUS_1                         27                           36
  CLUS_2                         28                           87
  CLUS_3                         25                           60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 27(14Q12) MUTATED       19      9     10      9     19      7      7
  DEL PEAK 27(14Q12) WILD-TYPE     25     15     21     25     28     29     40
D59V8, multiclass
        clus
vv       DEL PEAK 27(14Q12) MUTATED DEL PEAK 27(14Q12) WILD-TYPE
  CLUS_1                         19                           25
  CLUS_2                          9                           15
  CLUS_3                         10                           21
  CLUS_4                          9                           25
  CLUS_5                         19                           28
  CLUS_6                          7                           29
  CLUS_7                          7                           40
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(14Q12) MUTATED       20     33     27
  DEL PEAK 27(14Q12) WILD-TYPE     27     79     77
D59V9, multiclass
        clus
vv       DEL PEAK 27(14Q12) MUTATED DEL PEAK 27(14Q12) WILD-TYPE
  CLUS_1                         20                           27
  CLUS_2                         33                           79
  CLUS_3                         27                           77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(14Q12) MUTATED       17     39     24
  DEL PEAK 27(14Q12) WILD-TYPE     26     93     64
D59V10, multiclass
        clus
vv       DEL PEAK 27(14Q12) MUTATED DEL PEAK 27(14Q12) WILD-TYPE
  CLUS_1                         17                           26
  CLUS_2                         39                           93
  CLUS_3                         24                           64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(60) Variable = DEL PEAK 28(14Q24.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(14Q24.1) MUTATED       39     14     33
  DEL PEAK 28(14Q24.1) WILD-TYPE     28     82     68
D60V1, multiclass
        clus
vv       DEL PEAK 28(14Q24.1) MUTATED DEL PEAK 28(14Q24.1) WILD-TYPE
  CLUS_1                           39                             28
  CLUS_2                           14                             82
  CLUS_3                           33                             68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(14Q24.1) MUTATED       21     36     10     16
  DEL PEAK 28(14Q24.1) WILD-TYPE     68     24     44     31
D60V2, multiclass
        clus
vv       DEL PEAK 28(14Q24.1) MUTATED DEL PEAK 28(14Q24.1) WILD-TYPE
  CLUS_1                           21                             68
  CLUS_2                           36                             24
  CLUS_3                           10                             44
  CLUS_4                           16                             31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 28(14Q24.1) MUTATED       14      5      9      2      6
  DEL PEAK 28(14Q24.1) WILD-TYPE     23     24     25      3     13
D60V3, multiclass
        clus
vv       DEL PEAK 28(14Q24.1) MUTATED DEL PEAK 28(14Q24.1) WILD-TYPE
  CLUS_1                           14                             23
  CLUS_2                            5                             24
  CLUS_3                            9                             25
  CLUS_4                            2                              3
  CLUS_5                            6                             13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(14Q24.1) MUTATED       15      8      6      7
  DEL PEAK 28(14Q24.1) WILD-TYPE     27     30     20     11
D60V4, multiclass
        clus
vv       DEL PEAK 28(14Q24.1) MUTATED DEL PEAK 28(14Q24.1) WILD-TYPE
  CLUS_1                           15                             27
  CLUS_2                            8                             30
  CLUS_3                            6                             20
  CLUS_4                            7                             11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(14Q24.1) MUTATED       48     25     13
  DEL PEAK 28(14Q24.1) WILD-TYPE     70     47     60
D60V5, multiclass
        clus
vv       DEL PEAK 28(14Q24.1) MUTATED DEL PEAK 28(14Q24.1) WILD-TYPE
  CLUS_1                           48                             70
  CLUS_2                           25                             47
  CLUS_3                           13                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(14Q24.1) MUTATED       35      8     34      9
  DEL PEAK 28(14Q24.1) WILD-TYPE     61     36     30     50
D60V6, multiclass
        clus
vv       DEL PEAK 28(14Q24.1) MUTATED DEL PEAK 28(14Q24.1) WILD-TYPE
  CLUS_1                           35                             61
  CLUS_2                            8                             36
  CLUS_3                           34                             30
  CLUS_4                            9                             50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(14Q24.1) MUTATED       28     30     28
  DEL PEAK 28(14Q24.1) WILD-TYPE     35     85     57
D60V7, multiclass
        clus
vv       DEL PEAK 28(14Q24.1) MUTATED DEL PEAK 28(14Q24.1) WILD-TYPE
  CLUS_1                           28                             35
  CLUS_2                           30                             85
  CLUS_3                           28                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 28(14Q24.1) MUTATED       20      7     16     12     19      5
  DEL PEAK 28(14Q24.1) WILD-TYPE     24     17     15     22     28     31
                                vv
clus                             CLUS_7
  DEL PEAK 28(14Q24.1) MUTATED        7
  DEL PEAK 28(14Q24.1) WILD-TYPE     40
D60V8, multiclass
        clus
vv       DEL PEAK 28(14Q24.1) MUTATED DEL PEAK 28(14Q24.1) WILD-TYPE
  CLUS_1                           20                             24
  CLUS_2                            7                             17
  CLUS_3                           16                             15
  CLUS_4                           12                             22
  CLUS_5                           19                             28
  CLUS_6                            5                             31
  CLUS_7                            7                             40
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(14Q24.1) MUTATED       22     33     31
  DEL PEAK 28(14Q24.1) WILD-TYPE     25     79     73
D60V9, multiclass
        clus
vv       DEL PEAK 28(14Q24.1) MUTATED DEL PEAK 28(14Q24.1) WILD-TYPE
  CLUS_1                           22                             25
  CLUS_2                           33                             79
  CLUS_3                           31                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(14Q24.1) MUTATED       20     37     29
  DEL PEAK 28(14Q24.1) WILD-TYPE     23     95     59
D60V10, multiclass
        clus
vv       DEL PEAK 28(14Q24.1) MUTATED DEL PEAK 28(14Q24.1) WILD-TYPE
  CLUS_1                           20                             23
  CLUS_2                           37                             95
  CLUS_3                           29                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(61) Variable = DEL PEAK 29(15Q13.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(15Q13.1) MUTATED       41     35     31
  DEL PEAK 29(15Q13.1) WILD-TYPE     26     61     70
D61V1, multiclass
        clus
vv       DEL PEAK 29(15Q13.1) MUTATED DEL PEAK 29(15Q13.1) WILD-TYPE
  CLUS_1                           41                             26
  CLUS_2                           35                             61
  CLUS_3                           31                             70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(15Q13.1) MUTATED       37     36     19     11
  DEL PEAK 29(15Q13.1) WILD-TYPE     52     24     35     36
D61V2, multiclass
        clus
vv       DEL PEAK 29(15Q13.1) MUTATED DEL PEAK 29(15Q13.1) WILD-TYPE
  CLUS_1                           37                             52
  CLUS_2                           36                             24
  CLUS_3                           19                             35
  CLUS_4                           11                             36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 29(15Q13.1) MUTATED       12      9     12      1     11
  DEL PEAK 29(15Q13.1) WILD-TYPE     25     20     22      4      8
D61V3, multiclass
        clus
vv       DEL PEAK 29(15Q13.1) MUTATED DEL PEAK 29(15Q13.1) WILD-TYPE
  CLUS_1                           12                             25
  CLUS_2                            9                             20
  CLUS_3                           12                             22
  CLUS_4                            1                              4
  CLUS_5                           11                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(15Q13.1) MUTATED       13     14      9      9
  DEL PEAK 29(15Q13.1) WILD-TYPE     29     24     17      9
D61V4, multiclass
        clus
vv       DEL PEAK 29(15Q13.1) MUTATED DEL PEAK 29(15Q13.1) WILD-TYPE
  CLUS_1                           13                             29
  CLUS_2                           14                             24
  CLUS_3                            9                             17
  CLUS_4                            9                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(15Q13.1) MUTATED       49     28     29
  DEL PEAK 29(15Q13.1) WILD-TYPE     69     44     44
D61V5, multiclass
        clus
vv       DEL PEAK 29(15Q13.1) MUTATED DEL PEAK 29(15Q13.1) WILD-TYPE
  CLUS_1                           49                             69
  CLUS_2                           28                             44
  CLUS_3                           29                             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(15Q13.1) MUTATED       40     21     22     23
  DEL PEAK 29(15Q13.1) WILD-TYPE     56     23     42     36
D61V6, multiclass
        clus
vv       DEL PEAK 29(15Q13.1) MUTATED DEL PEAK 29(15Q13.1) WILD-TYPE
  CLUS_1                           40                             56
  CLUS_2                           21                             23
  CLUS_3                           22                             42
  CLUS_4                           23                             36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(15Q13.1) MUTATED       32     42     33
  DEL PEAK 29(15Q13.1) WILD-TYPE     31     73     52
D61V7, multiclass
        clus
vv       DEL PEAK 29(15Q13.1) MUTATED DEL PEAK 29(15Q13.1) WILD-TYPE
  CLUS_1                           32                             31
  CLUS_2                           42                             73
  CLUS_3                           33                             52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 29(15Q13.1) MUTATED       23     13     19     18     15     12
  DEL PEAK 29(15Q13.1) WILD-TYPE     21     11     12     16     32     24
                                vv
clus                             CLUS_7
  DEL PEAK 29(15Q13.1) MUTATED        7
  DEL PEAK 29(15Q13.1) WILD-TYPE     40
D61V8, multiclass
        clus
vv       DEL PEAK 29(15Q13.1) MUTATED DEL PEAK 29(15Q13.1) WILD-TYPE
  CLUS_1                           23                             21
  CLUS_2                           13                             11
  CLUS_3                           19                             12
  CLUS_4                           18                             16
  CLUS_5                           15                             32
  CLUS_6                           12                             24
  CLUS_7                            7                             40
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(15Q13.1) MUTATED       24     42     41
  DEL PEAK 29(15Q13.1) WILD-TYPE     23     70     63
D61V9, multiclass
        clus
vv       DEL PEAK 29(15Q13.1) MUTATED DEL PEAK 29(15Q13.1) WILD-TYPE
  CLUS_1                           24                             23
  CLUS_2                           42                             70
  CLUS_3                           41                             63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(15Q13.1) MUTATED       23     49     35
  DEL PEAK 29(15Q13.1) WILD-TYPE     20     83     53
D61V10, multiclass
        clus
vv       DEL PEAK 29(15Q13.1) MUTATED DEL PEAK 29(15Q13.1) WILD-TYPE
  CLUS_1                           23                             20
  CLUS_2                           49                             83
  CLUS_3                           35                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(62) Variable = DEL PEAK 30(16P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(16P13.3) MUTATED       39     35     30
  DEL PEAK 30(16P13.3) WILD-TYPE     28     61     71
D62V1, multiclass
        clus
vv       DEL PEAK 30(16P13.3) MUTATED DEL PEAK 30(16P13.3) WILD-TYPE
  CLUS_1                           39                             28
  CLUS_2                           35                             61
  CLUS_3                           30                             71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(16P13.3) MUTATED       33     34     19     13
  DEL PEAK 30(16P13.3) WILD-TYPE     56     26     35     34
D62V2, multiclass
        clus
vv       DEL PEAK 30(16P13.3) MUTATED DEL PEAK 30(16P13.3) WILD-TYPE
  CLUS_1                           33                             56
  CLUS_2                           34                             26
  CLUS_3                           19                             35
  CLUS_4                           13                             34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 30(16P13.3) MUTATED       12     10      9      1     11
  DEL PEAK 30(16P13.3) WILD-TYPE     25     19     25      4      8
D62V3, multiclass
        clus
vv       DEL PEAK 30(16P13.3) MUTATED DEL PEAK 30(16P13.3) WILD-TYPE
  CLUS_1                           12                             25
  CLUS_2                           10                             19
  CLUS_3                            9                             25
  CLUS_4                            1                              4
  CLUS_5                           11                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(16P13.3) MUTATED       12     13      9      9
  DEL PEAK 30(16P13.3) WILD-TYPE     30     25     17      9
D62V4, multiclass
        clus
vv       DEL PEAK 30(16P13.3) MUTATED DEL PEAK 30(16P13.3) WILD-TYPE
  CLUS_1                           12                             30
  CLUS_2                           13                             25
  CLUS_3                            9                             17
  CLUS_4                            9                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(16P13.3) MUTATED       50     26     28
  DEL PEAK 30(16P13.3) WILD-TYPE     68     46     45
D62V5, multiclass
        clus
vv       DEL PEAK 30(16P13.3) MUTATED DEL PEAK 30(16P13.3) WILD-TYPE
  CLUS_1                           50                             68
  CLUS_2                           26                             46
  CLUS_3                           28                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(16P13.3) MUTATED       39     18     26     21
  DEL PEAK 30(16P13.3) WILD-TYPE     57     26     38     38
D62V6, multiclass
        clus
vv       DEL PEAK 30(16P13.3) MUTATED DEL PEAK 30(16P13.3) WILD-TYPE
  CLUS_1                           39                             57
  CLUS_2                           18                             26
  CLUS_3                           26                             38
  CLUS_4                           21                             38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(16P13.3) MUTATED       24     47     33
  DEL PEAK 30(16P13.3) WILD-TYPE     39     68     52
D62V7, multiclass
        clus
vv       DEL PEAK 30(16P13.3) MUTATED DEL PEAK 30(16P13.3) WILD-TYPE
  CLUS_1                           24                             39
  CLUS_2                           47                             68
  CLUS_3                           33                             52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 30(16P13.3) MUTATED       18     10     20     14     17     14
  DEL PEAK 30(16P13.3) WILD-TYPE     26     14     11     20     30     22
                                vv
clus                             CLUS_7
  DEL PEAK 30(16P13.3) MUTATED       11
  DEL PEAK 30(16P13.3) WILD-TYPE     36
D62V8, multiclass
        clus
vv       DEL PEAK 30(16P13.3) MUTATED DEL PEAK 30(16P13.3) WILD-TYPE
  CLUS_1                           18                             26
  CLUS_2                           10                             14
  CLUS_3                           20                             11
  CLUS_4                           14                             20
  CLUS_5                           17                             30
  CLUS_6                           14                             22
  CLUS_7                           11                             36
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(16P13.3) MUTATED       17     43     44
  DEL PEAK 30(16P13.3) WILD-TYPE     30     69     60
D62V9, multiclass
        clus
vv       DEL PEAK 30(16P13.3) MUTATED DEL PEAK 30(16P13.3) WILD-TYPE
  CLUS_1                           17                             30
  CLUS_2                           43                             69
  CLUS_3                           44                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(16P13.3) MUTATED       17     50     37
  DEL PEAK 30(16P13.3) WILD-TYPE     26     82     51
D62V10, multiclass
        clus
vv       DEL PEAK 30(16P13.3) MUTATED DEL PEAK 30(16P13.3) WILD-TYPE
  CLUS_1                           17                             26
  CLUS_2                           50                             82
  CLUS_3                           37                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(63) Variable = DEL PEAK 31(16Q23.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(16Q23.1) MUTATED       33     22     18
  DEL PEAK 31(16Q23.1) WILD-TYPE     34     74     83
D63V1, multiclass
        clus
vv       DEL PEAK 31(16Q23.1) MUTATED DEL PEAK 31(16Q23.1) WILD-TYPE
  CLUS_1                           33                             34
  CLUS_2                           22                             74
  CLUS_3                           18                             83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(16Q23.1) MUTATED       23     25     13      8
  DEL PEAK 31(16Q23.1) WILD-TYPE     66     35     41     39
D63V2, multiclass
        clus
vv       DEL PEAK 31(16Q23.1) MUTATED DEL PEAK 31(16Q23.1) WILD-TYPE
  CLUS_1                           23                             66
  CLUS_2                           25                             35
  CLUS_3                           13                             41
  CLUS_4                            8                             39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 31(16Q23.1) MUTATED       10      6      7      0      7
  DEL PEAK 31(16Q23.1) WILD-TYPE     27     23     27      5     12
D63V3, multiclass
        clus
vv       DEL PEAK 31(16Q23.1) MUTATED DEL PEAK 31(16Q23.1) WILD-TYPE
  CLUS_1                           10                             27
  CLUS_2                            6                             23
  CLUS_3                            7                             27
  CLUS_4                            0                              5
  CLUS_5                            7                             12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(16Q23.1) MUTATED        9      8      4      9
  DEL PEAK 31(16Q23.1) WILD-TYPE     33     30     22      9
D63V4, multiclass
        clus
vv       DEL PEAK 31(16Q23.1) MUTATED DEL PEAK 31(16Q23.1) WILD-TYPE
  CLUS_1                            9                             33
  CLUS_2                            8                             30
  CLUS_3                            4                             22
  CLUS_4                            9                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(16Q23.1) MUTATED       38     13     22
  DEL PEAK 31(16Q23.1) WILD-TYPE     80     59     51
D63V5, multiclass
        clus
vv       DEL PEAK 31(16Q23.1) MUTATED DEL PEAK 31(16Q23.1) WILD-TYPE
  CLUS_1                           38                             80
  CLUS_2                           13                             59
  CLUS_3                           22                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(16Q23.1) MUTATED       33     11     12     17
  DEL PEAK 31(16Q23.1) WILD-TYPE     63     33     52     42
D63V6, multiclass
        clus
vv       DEL PEAK 31(16Q23.1) MUTATED DEL PEAK 31(16Q23.1) WILD-TYPE
  CLUS_1                           33                             63
  CLUS_2                           11                             33
  CLUS_3                           12                             52
  CLUS_4                           17                             42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(16Q23.1) MUTATED       25     31     17
  DEL PEAK 31(16Q23.1) WILD-TYPE     38     84     68
D63V7, multiclass
        clus
vv       DEL PEAK 31(16Q23.1) MUTATED DEL PEAK 31(16Q23.1) WILD-TYPE
  CLUS_1                           25                             38
  CLUS_2                           31                             84
  CLUS_3                           17                             68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 31(16Q23.1) MUTATED       20      5     13      8      6     15
  DEL PEAK 31(16Q23.1) WILD-TYPE     24     19     18     26     41     21
                                vv
clus                             CLUS_7
  DEL PEAK 31(16Q23.1) MUTATED        6
  DEL PEAK 31(16Q23.1) WILD-TYPE     41
D63V8, multiclass
        clus
vv       DEL PEAK 31(16Q23.1) MUTATED DEL PEAK 31(16Q23.1) WILD-TYPE
  CLUS_1                           20                             24
  CLUS_2                            5                             19
  CLUS_3                           13                             18
  CLUS_4                            8                             26
  CLUS_5                            6                             41
  CLUS_6                           15                             21
  CLUS_7                            6                             41
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(16Q23.1) MUTATED       18     26     29
  DEL PEAK 31(16Q23.1) WILD-TYPE     29     86     75
D63V9, multiclass
        clus
vv       DEL PEAK 31(16Q23.1) MUTATED DEL PEAK 31(16Q23.1) WILD-TYPE
  CLUS_1                           18                             29
  CLUS_2                           26                             86
  CLUS_3                           29                             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(16Q23.1) MUTATED       20     31     22
  DEL PEAK 31(16Q23.1) WILD-TYPE     23    101     66
D63V10, multiclass
        clus
vv       DEL PEAK 31(16Q23.1) MUTATED DEL PEAK 31(16Q23.1) WILD-TYPE
  CLUS_1                           20                             23
  CLUS_2                           31                            101
  CLUS_3                           22                             66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(64) Variable = DEL PEAK 32(17P12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(17P12) MUTATED       48     25     64
  DEL PEAK 32(17P12) WILD-TYPE     19     71     37
D64V1, multiclass
        clus
vv       DEL PEAK 32(17P12) MUTATED DEL PEAK 32(17P12) WILD-TYPE
  CLUS_1                         48                           19
  CLUS_2                         25                           71
  CLUS_3                         64                           37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(17P12) MUTATED       38     40     25     27
  DEL PEAK 32(17P12) WILD-TYPE     51     20     29     20
D64V2, multiclass
        clus
vv       DEL PEAK 32(17P12) MUTATED DEL PEAK 32(17P12) WILD-TYPE
  CLUS_1                         38                           51
  CLUS_2                         40                           20
  CLUS_3                         25                           29
  CLUS_4                         27                           20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 32(17P12) MUTATED       24     11     19      2      8
  DEL PEAK 32(17P12) WILD-TYPE     13     18     15      3     11
D64V3, multiclass
        clus
vv       DEL PEAK 32(17P12) MUTATED DEL PEAK 32(17P12) WILD-TYPE
  CLUS_1                         24                           13
  CLUS_2                         11                           18
  CLUS_3                         19                           15
  CLUS_4                          2                            3
  CLUS_5                          8                           11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(17P12) MUTATED       25     17     13      9
  DEL PEAK 32(17P12) WILD-TYPE     17     21     13      9
D64V4, multiclass
        clus
vv       DEL PEAK 32(17P12) MUTATED DEL PEAK 32(17P12) WILD-TYPE
  CLUS_1                         25                           17
  CLUS_2                         17                           21
  CLUS_3                         13                           13
  CLUS_4                          9                            9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(17P12) MUTATED       67     34     36
  DEL PEAK 32(17P12) WILD-TYPE     51     38     37
D64V5, multiclass
        clus
vv       DEL PEAK 32(17P12) MUTATED DEL PEAK 32(17P12) WILD-TYPE
  CLUS_1                         67                           51
  CLUS_2                         34                           38
  CLUS_3                         36                           37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(17P12) MUTATED       51     17     41     28
  DEL PEAK 32(17P12) WILD-TYPE     45     27     23     31
D64V6, multiclass
        clus
vv       DEL PEAK 32(17P12) MUTATED DEL PEAK 32(17P12) WILD-TYPE
  CLUS_1                         51                           45
  CLUS_2                         17                           27
  CLUS_3                         41                           23
  CLUS_4                         28                           31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(17P12) MUTATED       34     61     41
  DEL PEAK 32(17P12) WILD-TYPE     29     54     44
D64V7, multiclass
        clus
vv       DEL PEAK 32(17P12) MUTATED DEL PEAK 32(17P12) WILD-TYPE
  CLUS_1                         34                           29
  CLUS_2                         61                           54
  CLUS_3                         41                           44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 32(17P12) MUTATED       24     11     24     17     26     19     15
  DEL PEAK 32(17P12) WILD-TYPE     20     13      7     17     21     17     32
D64V8, multiclass
        clus
vv       DEL PEAK 32(17P12) MUTATED DEL PEAK 32(17P12) WILD-TYPE
  CLUS_1                         24                           20
  CLUS_2                         11                           13
  CLUS_3                         24                            7
  CLUS_4                         17                           17
  CLUS_5                         26                           21
  CLUS_6                         19                           17
  CLUS_7                         15                           32
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(17P12) MUTATED       26     57     53
  DEL PEAK 32(17P12) WILD-TYPE     21     55     51
D64V9, multiclass
        clus
vv       DEL PEAK 32(17P12) MUTATED DEL PEAK 32(17P12) WILD-TYPE
  CLUS_1                         26                           21
  CLUS_2                         57                           55
  CLUS_3                         53                           51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(17P12) MUTATED       23     66     47
  DEL PEAK 32(17P12) WILD-TYPE     20     66     41
D64V10, multiclass
        clus
vv       DEL PEAK 32(17P12) MUTATED DEL PEAK 32(17P12) WILD-TYPE
  CLUS_1                         23                           20
  CLUS_2                         66                           66
  CLUS_3                         47                           41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(65) Variable = DEL PEAK 33(18Q21.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(18Q21.2) MUTATED       35     33     47
  DEL PEAK 33(18Q21.2) WILD-TYPE     32     63     54
D65V1, multiclass
        clus
vv       DEL PEAK 33(18Q21.2) MUTATED DEL PEAK 33(18Q21.2) WILD-TYPE
  CLUS_1                           35                             32
  CLUS_2                           33                             63
  CLUS_3                           47                             54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(18Q21.2) MUTATED       37     29     24     20
  DEL PEAK 33(18Q21.2) WILD-TYPE     52     31     30     27
D65V2, multiclass
        clus
vv       DEL PEAK 33(18Q21.2) MUTATED DEL PEAK 33(18Q21.2) WILD-TYPE
  CLUS_1                           37                             52
  CLUS_2                           29                             31
  CLUS_3                           24                             30
  CLUS_4                           20                             27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 33(18Q21.2) MUTATED       16     15     14      3      8
  DEL PEAK 33(18Q21.2) WILD-TYPE     21     14     20      2     11
D65V3, multiclass
        clus
vv       DEL PEAK 33(18Q21.2) MUTATED DEL PEAK 33(18Q21.2) WILD-TYPE
  CLUS_1                           16                             21
  CLUS_2                           15                             14
  CLUS_3                           14                             20
  CLUS_4                            3                              2
  CLUS_5                            8                             11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(18Q21.2) MUTATED       18     20     11      7
  DEL PEAK 33(18Q21.2) WILD-TYPE     24     18     15     11
D65V4, multiclass
        clus
vv       DEL PEAK 33(18Q21.2) MUTATED DEL PEAK 33(18Q21.2) WILD-TYPE
  CLUS_1                           18                             24
  CLUS_2                           20                             18
  CLUS_3                           11                             15
  CLUS_4                            7                             11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(18Q21.2) MUTATED       53     31     30
  DEL PEAK 33(18Q21.2) WILD-TYPE     65     41     43
D65V5, multiclass
        clus
vv       DEL PEAK 33(18Q21.2) MUTATED DEL PEAK 33(18Q21.2) WILD-TYPE
  CLUS_1                           53                             65
  CLUS_2                           31                             41
  CLUS_3                           30                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(18Q21.2) MUTATED       40     18     32     24
  DEL PEAK 33(18Q21.2) WILD-TYPE     56     26     32     35
D65V6, multiclass
        clus
vv       DEL PEAK 33(18Q21.2) MUTATED DEL PEAK 33(18Q21.2) WILD-TYPE
  CLUS_1                           40                             56
  CLUS_2                           18                             26
  CLUS_3                           32                             32
  CLUS_4                           24                             35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(18Q21.2) MUTATED       38     40     37
  DEL PEAK 33(18Q21.2) WILD-TYPE     25     75     48
D65V7, multiclass
        clus
vv       DEL PEAK 33(18Q21.2) MUTATED DEL PEAK 33(18Q21.2) WILD-TYPE
  CLUS_1                           38                             25
  CLUS_2                           40                             75
  CLUS_3                           37                             48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 33(18Q21.2) MUTATED       25     17     16     18     19      9
  DEL PEAK 33(18Q21.2) WILD-TYPE     19      7     15     16     28     27
                                vv
clus                             CLUS_7
  DEL PEAK 33(18Q21.2) MUTATED       11
  DEL PEAK 33(18Q21.2) WILD-TYPE     36
D65V8, multiclass
        clus
vv       DEL PEAK 33(18Q21.2) MUTATED DEL PEAK 33(18Q21.2) WILD-TYPE
  CLUS_1                           25                             19
  CLUS_2                           17                              7
  CLUS_3                           16                             15
  CLUS_4                           18                             16
  CLUS_5                           19                             28
  CLUS_6                            9                             27
  CLUS_7                           11                             36
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(18Q21.2) MUTATED       27     50     38
  DEL PEAK 33(18Q21.2) WILD-TYPE     20     62     66
D65V9, multiclass
        clus
vv       DEL PEAK 33(18Q21.2) MUTATED DEL PEAK 33(18Q21.2) WILD-TYPE
  CLUS_1                           27                             20
  CLUS_2                           50                             62
  CLUS_3                           38                             66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(18Q21.2) MUTATED       23     63     29
  DEL PEAK 33(18Q21.2) WILD-TYPE     20     69     59
D65V10, multiclass
        clus
vv       DEL PEAK 33(18Q21.2) MUTATED DEL PEAK 33(18Q21.2) WILD-TYPE
  CLUS_1                           23                             20
  CLUS_2                           63                             69
  CLUS_3                           29                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(66) Variable = DEL PEAK 34(19P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(19P13.3) MUTATED       36     26     34
  DEL PEAK 34(19P13.3) WILD-TYPE     31     70     67
D66V1, multiclass
        clus
vv       DEL PEAK 34(19P13.3) MUTATED DEL PEAK 34(19P13.3) WILD-TYPE
  CLUS_1                           36                             31
  CLUS_2                           26                             70
  CLUS_3                           34                             67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(19P13.3) MUTATED       35     27     18     13
  DEL PEAK 34(19P13.3) WILD-TYPE     54     33     36     34
D66V2, multiclass
        clus
vv       DEL PEAK 34(19P13.3) MUTATED DEL PEAK 34(19P13.3) WILD-TYPE
  CLUS_1                           35                             54
  CLUS_2                           27                             33
  CLUS_3                           18                             36
  CLUS_4                           13                             34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 34(19P13.3) MUTATED       15     12     11      2      9
  DEL PEAK 34(19P13.3) WILD-TYPE     22     17     23      3     10
D66V3, multiclass
        clus
vv       DEL PEAK 34(19P13.3) MUTATED DEL PEAK 34(19P13.3) WILD-TYPE
  CLUS_1                           15                             22
  CLUS_2                           12                             17
  CLUS_3                           11                             23
  CLUS_4                            2                              3
  CLUS_5                            9                             10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(19P13.3) MUTATED       16     18      8      7
  DEL PEAK 34(19P13.3) WILD-TYPE     26     20     18     11
D66V4, multiclass
        clus
vv       DEL PEAK 34(19P13.3) MUTATED DEL PEAK 34(19P13.3) WILD-TYPE
  CLUS_1                           16                             26
  CLUS_2                           18                             20
  CLUS_3                            8                             18
  CLUS_4                            7                             11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(19P13.3) MUTATED       33     30     32
  DEL PEAK 34(19P13.3) WILD-TYPE     85     42     41
D66V5, multiclass
        clus
vv       DEL PEAK 34(19P13.3) MUTATED DEL PEAK 34(19P13.3) WILD-TYPE
  CLUS_1                           33                             85
  CLUS_2                           30                             42
  CLUS_3                           32                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(19P13.3) MUTATED       25     19     27     24
  DEL PEAK 34(19P13.3) WILD-TYPE     71     25     37     35
D66V6, multiclass
        clus
vv       DEL PEAK 34(19P13.3) MUTATED DEL PEAK 34(19P13.3) WILD-TYPE
  CLUS_1                           25                             71
  CLUS_2                           19                             25
  CLUS_3                           27                             37
  CLUS_4                           24                             35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(19P13.3) MUTATED       26     37     32
  DEL PEAK 34(19P13.3) WILD-TYPE     37     78     53
D66V7, multiclass
        clus
vv       DEL PEAK 34(19P13.3) MUTATED DEL PEAK 34(19P13.3) WILD-TYPE
  CLUS_1                           26                             37
  CLUS_2                           37                             78
  CLUS_3                           32                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 34(19P13.3) MUTATED       16     13     12     14     18     14
  DEL PEAK 34(19P13.3) WILD-TYPE     28     11     19     20     29     22
                                vv
clus                             CLUS_7
  DEL PEAK 34(19P13.3) MUTATED        8
  DEL PEAK 34(19P13.3) WILD-TYPE     39
D66V8, multiclass
        clus
vv       DEL PEAK 34(19P13.3) MUTATED DEL PEAK 34(19P13.3) WILD-TYPE
  CLUS_1                           16                             28
  CLUS_2                           13                             11
  CLUS_3                           12                             19
  CLUS_4                           14                             20
  CLUS_5                           18                             29
  CLUS_6                           14                             22
  CLUS_7                            8                             39
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(19P13.3) MUTATED       17     47     31
  DEL PEAK 34(19P13.3) WILD-TYPE     30     65     73
D66V9, multiclass
        clus
vv       DEL PEAK 34(19P13.3) MUTATED DEL PEAK 34(19P13.3) WILD-TYPE
  CLUS_1                           17                             30
  CLUS_2                           47                             65
  CLUS_3                           31                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(19P13.3) MUTATED       15     53     27
  DEL PEAK 34(19P13.3) WILD-TYPE     28     79     61
D66V10, multiclass
        clus
vv       DEL PEAK 34(19P13.3) MUTATED DEL PEAK 34(19P13.3) WILD-TYPE
  CLUS_1                           15                             28
  CLUS_2                           53                             79
  CLUS_3                           27                             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(67) Variable = DEL PEAK 35(22Q13.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(22Q13.31) MUTATED       46     42     30
  DEL PEAK 35(22Q13.31) WILD-TYPE     21     54     71
D67V1, multiclass
        clus
vv       DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE
  CLUS_1                            46                              21
  CLUS_2                            42                              54
  CLUS_3                            30                              71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(22Q13.31) MUTATED       46     36     19     13
  DEL PEAK 35(22Q13.31) WILD-TYPE     43     24     35     34
D67V2, multiclass
        clus
vv       DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE
  CLUS_1                            46                              43
  CLUS_2                            36                              24
  CLUS_3                            19                              35
  CLUS_4                            13                              34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 35(22Q13.31) MUTATED       15     16     12      1      9
  DEL PEAK 35(22Q13.31) WILD-TYPE     22     13     22      4     10
D67V3, multiclass
        clus
vv       DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE
  CLUS_1                            15                              22
  CLUS_2                            16                              13
  CLUS_3                            12                              22
  CLUS_4                             1                               4
  CLUS_5                             9                              10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(22Q13.31) MUTATED       12     24      8      9
  DEL PEAK 35(22Q13.31) WILD-TYPE     30     14     18      9
D67V4, multiclass
        clus
vv       DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE
  CLUS_1                            12                              30
  CLUS_2                            24                              14
  CLUS_3                             8                              18
  CLUS_4                             9                               9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(22Q13.31) MUTATED       44     37     36
  DEL PEAK 35(22Q13.31) WILD-TYPE     74     35     37
D67V5, multiclass
        clus
vv       DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE
  CLUS_1                            44                              74
  CLUS_2                            37                              35
  CLUS_3                            36                              37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(22Q13.31) MUTATED       37     21     29     30
  DEL PEAK 35(22Q13.31) WILD-TYPE     59     23     35     29
D67V6, multiclass
        clus
vv       DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE
  CLUS_1                            37                              59
  CLUS_2                            21                              23
  CLUS_3                            29                              35
  CLUS_4                            30                              29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(22Q13.31) MUTATED       29     48     41
  DEL PEAK 35(22Q13.31) WILD-TYPE     34     67     44
D67V7, multiclass
        clus
vv       DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE
  CLUS_1                            29                              34
  CLUS_2                            48                              67
  CLUS_3                            41                              44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 35(22Q13.31) MUTATED       20     14     16     15     23     18
  DEL PEAK 35(22Q13.31) WILD-TYPE     24     10     15     19     24     18
                                 vv
clus                              CLUS_7
  DEL PEAK 35(22Q13.31) MUTATED       12
  DEL PEAK 35(22Q13.31) WILD-TYPE     35
D67V8, multiclass
        clus
vv       DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE
  CLUS_1                            20                              24
  CLUS_2                            14                              10
  CLUS_3                            16                              15
  CLUS_4                            15                              19
  CLUS_5                            23                              24
  CLUS_6                            18                              18
  CLUS_7                            12                              35
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(22Q13.31) MUTATED       16     58     44
  DEL PEAK 35(22Q13.31) WILD-TYPE     31     54     60
D67V9, multiclass
        clus
vv       DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE
  CLUS_1                            16                              31
  CLUS_2                            58                              54
  CLUS_3                            44                              60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(22Q13.31) MUTATED       20     63     35
  DEL PEAK 35(22Q13.31) WILD-TYPE     23     69     53
D67V10, multiclass
        clus
vv       DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE
  CLUS_1                            20                              23
  CLUS_2                            63                              69
  CLUS_3                            35                              53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(68) Variable = DEL PEAK 36(XP11.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(XP11.3) MUTATED       15     15     32
  DEL PEAK 36(XP11.3) WILD-TYPE     52     81     69
D68V1, multiclass
        clus
vv       DEL PEAK 36(XP11.3) MUTATED DEL PEAK 36(XP11.3) WILD-TYPE
  CLUS_1                          15                            52
  CLUS_2                          15                            81
  CLUS_3                          32                            69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(XP11.3) MUTATED       19      8     20     10
  DEL PEAK 36(XP11.3) WILD-TYPE     70     52     34     37
D68V2, multiclass
        clus
vv       DEL PEAK 36(XP11.3) MUTATED DEL PEAK 36(XP11.3) WILD-TYPE
  CLUS_1                          19                            70
  CLUS_2                           8                            52
  CLUS_3                          20                            34
  CLUS_4                          10                            37
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 36(XP11.3) MUTATED       11      7      8      0      6
  DEL PEAK 36(XP11.3) WILD-TYPE     26     22     26      5     13
D68V3, multiclass
        clus
vv       DEL PEAK 36(XP11.3) MUTATED DEL PEAK 36(XP11.3) WILD-TYPE
  CLUS_1                          11                            26
  CLUS_2                           7                            22
  CLUS_3                           8                            26
  CLUS_4                           0                             5
  CLUS_5                           6                            13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(XP11.3) MUTATED       14      9      5      4
  DEL PEAK 36(XP11.3) WILD-TYPE     28     29     21     14
D68V4, multiclass
        clus
vv       DEL PEAK 36(XP11.3) MUTATED DEL PEAK 36(XP11.3) WILD-TYPE
  CLUS_1                          14                            28
  CLUS_2                           9                            29
  CLUS_3                           5                            21
  CLUS_4                           4                            14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(XP11.3) MUTATED       26     13     22
  DEL PEAK 36(XP11.3) WILD-TYPE     92     59     51
D68V5, multiclass
        clus
vv       DEL PEAK 36(XP11.3) MUTATED DEL PEAK 36(XP11.3) WILD-TYPE
  CLUS_1                          26                            92
  CLUS_2                          13                            59
  CLUS_3                          22                            51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(XP11.3) MUTATED       21     10     15     15
  DEL PEAK 36(XP11.3) WILD-TYPE     75     34     49     44
D68V6, multiclass
        clus
vv       DEL PEAK 36(XP11.3) MUTATED DEL PEAK 36(XP11.3) WILD-TYPE
  CLUS_1                          21                            75
  CLUS_2                          10                            34
  CLUS_3                          15                            49
  CLUS_4                          15                            44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(XP11.3) MUTATED       14     34     14
  DEL PEAK 36(XP11.3) WILD-TYPE     49     81     71
D68V7, multiclass
        clus
vv       DEL PEAK 36(XP11.3) MUTATED DEL PEAK 36(XP11.3) WILD-TYPE
  CLUS_1                          14                            49
  CLUS_2                          34                            81
  CLUS_3                          14                            71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 36(XP11.3) MUTATED        9      7      8     10      8      8
  DEL PEAK 36(XP11.3) WILD-TYPE     35     17     23     24     39     28
                               vv
clus                            CLUS_7
  DEL PEAK 36(XP11.3) MUTATED       12
  DEL PEAK 36(XP11.3) WILD-TYPE     35
D68V8, multiclass
        clus
vv       DEL PEAK 36(XP11.3) MUTATED DEL PEAK 36(XP11.3) WILD-TYPE
  CLUS_1                           9                            35
  CLUS_2                           7                            17
  CLUS_3                           8                            23
  CLUS_4                          10                            24
  CLUS_5                           8                            39
  CLUS_6                           8                            28
  CLUS_7                          12                            35
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(XP11.3) MUTATED        9     23     30
  DEL PEAK 36(XP11.3) WILD-TYPE     38     89     74
D68V9, multiclass
        clus
vv       DEL PEAK 36(XP11.3) MUTATED DEL PEAK 36(XP11.3) WILD-TYPE
  CLUS_1                           9                            38
  CLUS_2                          23                            89
  CLUS_3                          30                            74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(XP11.3) MUTATED       10     29     23
  DEL PEAK 36(XP11.3) WILD-TYPE     33    103     65
D68V10, multiclass
        clus
vv       DEL PEAK 36(XP11.3) MUTATED DEL PEAK 36(XP11.3) WILD-TYPE
  CLUS_1                          10                            33
  CLUS_2                          29                           103
  CLUS_3                          23                            65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(69) Variable = DEL PEAK 37(XQ21.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(XQ21.33) MUTATED       17      9     27
  DEL PEAK 37(XQ21.33) WILD-TYPE     50     87     74
D69V1, multiclass
        clus
vv       DEL PEAK 37(XQ21.33) MUTATED DEL PEAK 37(XQ21.33) WILD-TYPE
  CLUS_1                           17                             50
  CLUS_2                            9                             87
  CLUS_3                           27                             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(XQ21.33) MUTATED       12     11     19      8
  DEL PEAK 37(XQ21.33) WILD-TYPE     77     49     35     39
D69V2, multiclass
        clus
vv       DEL PEAK 37(XQ21.33) MUTATED DEL PEAK 37(XQ21.33) WILD-TYPE
  CLUS_1                           12                             77
  CLUS_2                           11                             49
  CLUS_3                           19                             35
  CLUS_4                            8                             39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 37(XQ21.33) MUTATED        8      6      9      1      4
  DEL PEAK 37(XQ21.33) WILD-TYPE     29     23     25      4     15
D69V3, multiclass
        clus
vv       DEL PEAK 37(XQ21.33) MUTATED DEL PEAK 37(XQ21.33) WILD-TYPE
  CLUS_1                            8                             29
  CLUS_2                            6                             23
  CLUS_3                            9                             25
  CLUS_4                            1                              4
  CLUS_5                            4                             15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(XQ21.33) MUTATED        9      7      9      3
  DEL PEAK 37(XQ21.33) WILD-TYPE     33     31     17     15
D69V4, multiclass
        clus
vv       DEL PEAK 37(XQ21.33) MUTATED DEL PEAK 37(XQ21.33) WILD-TYPE
  CLUS_1                            9                             33
  CLUS_2                            7                             31
  CLUS_3                            9                             17
  CLUS_4                            3                             15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(XQ21.33) MUTATED       27      7     18
  DEL PEAK 37(XQ21.33) WILD-TYPE     91     65     55
D69V5, multiclass
        clus
vv       DEL PEAK 37(XQ21.33) MUTATED DEL PEAK 37(XQ21.33) WILD-TYPE
  CLUS_1                           27                             91
  CLUS_2                            7                             65
  CLUS_3                           18                             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(XQ21.33) MUTATED       23      5     10     14
  DEL PEAK 37(XQ21.33) WILD-TYPE     73     39     54     45
D69V6, multiclass
        clus
vv       DEL PEAK 37(XQ21.33) MUTATED DEL PEAK 37(XQ21.33) WILD-TYPE
  CLUS_1                           23                             73
  CLUS_2                            5                             39
  CLUS_3                           10                             54
  CLUS_4                           14                             45
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(XQ21.33) MUTATED       14     29     10
  DEL PEAK 37(XQ21.33) WILD-TYPE     49     86     75
D69V7, multiclass
        clus
vv       DEL PEAK 37(XQ21.33) MUTATED DEL PEAK 37(XQ21.33) WILD-TYPE
  CLUS_1                           14                             49
  CLUS_2                           29                             86
  CLUS_3                           10                             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 37(XQ21.33) MUTATED       12      3      9      8      6      5
  DEL PEAK 37(XQ21.33) WILD-TYPE     32     21     22     26     41     31
                                vv
clus                             CLUS_7
  DEL PEAK 37(XQ21.33) MUTATED       10
  DEL PEAK 37(XQ21.33) WILD-TYPE     37
D69V8, multiclass
        clus
vv       DEL PEAK 37(XQ21.33) MUTATED DEL PEAK 37(XQ21.33) WILD-TYPE
  CLUS_1                           12                             32
  CLUS_2                            3                             21
  CLUS_3                            9                             22
  CLUS_4                            8                             26
  CLUS_5                            6                             41
  CLUS_6                            5                             31
  CLUS_7                           10                             37
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(XQ21.33) MUTATED       11     17     25
  DEL PEAK 37(XQ21.33) WILD-TYPE     36     95     79
D69V9, multiclass
        clus
vv       DEL PEAK 37(XQ21.33) MUTATED DEL PEAK 37(XQ21.33) WILD-TYPE
  CLUS_1                           11                             36
  CLUS_2                           17                             95
  CLUS_3                           25                             79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(XQ21.33) MUTATED       12     19     22
  DEL PEAK 37(XQ21.33) WILD-TYPE     31    113     66
D69V10, multiclass
        clus
vv       DEL PEAK 37(XQ21.33) MUTATED DEL PEAK 37(XQ21.33) WILD-TYPE
  CLUS_1                           12                             31
  CLUS_2                           19                            113
  CLUS_3                           22                             66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(70) Variable = DEL PEAK 38(XQ23) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(XQ23) MUTATED       14     11     24
  DEL PEAK 38(XQ23) WILD-TYPE     53     85     77
D70V1, multiclass
        clus
vv       DEL PEAK 38(XQ23) MUTATED DEL PEAK 38(XQ23) WILD-TYPE
  CLUS_1                        14                          53
  CLUS_2                        11                          85
  CLUS_3                        24                          77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(XQ23) MUTATED       10     11     17      8
  DEL PEAK 38(XQ23) WILD-TYPE     79     49     37     39
D70V2, multiclass
        clus
vv       DEL PEAK 38(XQ23) MUTATED DEL PEAK 38(XQ23) WILD-TYPE
  CLUS_1                        10                          79
  CLUS_2                        11                          49
  CLUS_3                        17                          37
  CLUS_4                         8                          39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 38(XQ23) MUTATED        7      6      8      1      4
  DEL PEAK 38(XQ23) WILD-TYPE     30     23     26      4     15
D70V3, multiclass
        clus
vv       DEL PEAK 38(XQ23) MUTATED DEL PEAK 38(XQ23) WILD-TYPE
  CLUS_1                         7                          30
  CLUS_2                         6                          23
  CLUS_3                         8                          26
  CLUS_4                         1                           4
  CLUS_5                         4                          15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(XQ23) MUTATED        8      7      8      3
  DEL PEAK 38(XQ23) WILD-TYPE     34     31     18     15
D70V4, multiclass
        clus
vv       DEL PEAK 38(XQ23) MUTATED DEL PEAK 38(XQ23) WILD-TYPE
  CLUS_1                         8                          34
  CLUS_2                         7                          31
  CLUS_3                         8                          18
  CLUS_4                         3                          15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(XQ23) MUTATED       24      9     15
  DEL PEAK 38(XQ23) WILD-TYPE     94     63     58
D70V5, multiclass
        clus
vv       DEL PEAK 38(XQ23) MUTATED DEL PEAK 38(XQ23) WILD-TYPE
  CLUS_1                        24                          94
  CLUS_2                         9                          63
  CLUS_3                        15                          58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(XQ23) MUTATED       21      6     10     11
  DEL PEAK 38(XQ23) WILD-TYPE     75     38     54     48
D70V6, multiclass
        clus
vv       DEL PEAK 38(XQ23) MUTATED DEL PEAK 38(XQ23) WILD-TYPE
  CLUS_1                        21                          75
  CLUS_2                         6                          38
  CLUS_3                        10                          54
  CLUS_4                        11                          48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(XQ23) MUTATED       12     26     11
  DEL PEAK 38(XQ23) WILD-TYPE     51     89     74
D70V7, multiclass
        clus
vv       DEL PEAK 38(XQ23) MUTATED DEL PEAK 38(XQ23) WILD-TYPE
  CLUS_1                        12                          51
  CLUS_2                        26                          89
  CLUS_3                        11                          74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 38(XQ23) MUTATED       10      3      8      8      7      3     10
  DEL PEAK 38(XQ23) WILD-TYPE     34     21     23     26     40     33     37
D70V8, multiclass
        clus
vv       DEL PEAK 38(XQ23) MUTATED DEL PEAK 38(XQ23) WILD-TYPE
  CLUS_1                        10                          34
  CLUS_2                         3                          21
  CLUS_3                         8                          23
  CLUS_4                         8                          26
  CLUS_5                         7                          40
  CLUS_6                         3                          33
  CLUS_7                        10                          37
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(XQ23) MUTATED        8     16     25
  DEL PEAK 38(XQ23) WILD-TYPE     39     96     79
D70V9, multiclass
        clus
vv       DEL PEAK 38(XQ23) MUTATED DEL PEAK 38(XQ23) WILD-TYPE
  CLUS_1                         8                          39
  CLUS_2                        16                          96
  CLUS_3                        25                          79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(XQ23) MUTATED       10     19     20
  DEL PEAK 38(XQ23) WILD-TYPE     33    113     68
D70V10, multiclass
        clus
vv       DEL PEAK 38(XQ23) MUTATED DEL PEAK 38(XQ23) WILD-TYPE
  CLUS_1                        10                          33
  CLUS_2                        19                         113
  CLUS_3                        20                          68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
