[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"         "-nVNozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "dx" ""  
[1] "dx" " " 
[1] "dx" " " 
                          Clinical feature           
Time to Death             "Time to Death"            
AGE                       "AGE"                      
AGE_mutation.rate         "AGE_mutation rate"        
PRIMARY.SITE.OF.DISEASE   "PRIMARY SITE OF DISEASE"  
NEOPLASM.DISEASESTAGE     "NEOPLASM DISEASESTAGE"    
PATHOLOGY.T.STAGE         "PATHOLOGY T STAGE"        
PATHOLOGY.N.STAGE         "PATHOLOGY N STAGE"        
PATHOLOGY.M.STAGE         "PATHOLOGY M STAGE"        
GENDER                    "GENDER"                   
HISTOLOGICAL.TYPE         "HISTOLOGICAL TYPE"        
COMPLETENESS.OF.RESECTION "COMPLETENESS OF RESECTION"
NUMBER.OF.LYMPH.NODES     "NUMBER OF LYMPH NODES"    
                          Statistical test             Significant variables
Time to Death             "Cox regression test"        "N=0"                
AGE                       "Spearman correlation test"  "N=2"                
AGE_mutation.rate         "Linear Regression Analysis" "N=1"                
PRIMARY.SITE.OF.DISEASE   "Wilcoxon test"              "N=2"                
NEOPLASM.DISEASESTAGE     "Kruskal-Wallis test"        "N=1"                
PATHOLOGY.T.STAGE         "Spearman correlation test"  "N=1"                
PATHOLOGY.N.STAGE         "Spearman correlation test"  "N=0"                
PATHOLOGY.M.STAGE         "Kruskal-Wallis test"        "N=0"                
GENDER                    "Wilcoxon test"              "N=0"                
HISTOLOGICAL.TYPE         "Kruskal-Wallis test"        "N=2"                
COMPLETENESS.OF.RESECTION "Kruskal-Wallis test"        "N=0"                
NUMBER.OF.LYMPH.NODES     "Spearman correlation test"  "N=0"                
                          Associated with
Time to Death             " "            
AGE                       "older"        
AGE_mutation.rate         " "            
PRIMARY.SITE.OF.DISEASE   "rectum"       
NEOPLASM.DISEASESTAGE     " "            
PATHOLOGY.T.STAGE         "higher stage" 
PATHOLOGY.N.STAGE         " "            
PATHOLOGY.M.STAGE         " "            
GENDER                    " "            
HISTOLOGICAL.TYPE         " "            
COMPLETENESS.OF.RESECTION " "            
NUMBER.OF.LYMPH.NODES     " "            
                          &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
Time to Death             " "                                                                                       
AGE                       "N=2"                                                                                     
AGE_mutation.rate         " "                                                                                       
PRIMARY.SITE.OF.DISEASE   "N=2"                                                                                     
NEOPLASM.DISEASESTAGE     " "                                                                                       
PATHOLOGY.T.STAGE         "N=1"                                                                                     
PATHOLOGY.N.STAGE         " "                                                                                       
PATHOLOGY.M.STAGE         " "                                                                                       
GENDER                    " "                                                                                       
HISTOLOGICAL.TYPE         " "                                                                                       
COMPLETENESS.OF.RESECTION " "                                                                                       
NUMBER.OF.LYMPH.NODES     " "                                                                                       
                          Associated with      
Time to Death             " "             " "  
AGE                       "younger"       "N=0"
AGE_mutation.rate         " "             " "  
PRIMARY.SITE.OF.DISEASE   "colon"         "N=0"
NEOPLASM.DISEASESTAGE     " "             " "  
PATHOLOGY.T.STAGE         "lower stage"   "N=0"
PATHOLOGY.N.STAGE         " "             " "  
PATHOLOGY.M.STAGE         " "             " "  
GENDER                    " "             " "  
HISTOLOGICAL.TYPE         " "             " "  
COMPLETENESS.OF.RESECTION " "             " "  
NUMBER.OF.LYMPH.NODES     " "             " "  
