[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"         "-nVNozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"        "-oTESCA-TP"
[1] "opt"       "-OPMUTSIG"
[1] "tl" ""  
[1] "dx" ""  
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/ESCA-TP/10668123/ESCA-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/ESCA-TP/10013681/transformed.cor.cli.txt"

nPatients in clinical file=185, in cluster file=126, common to both=126
[1]  75 126
[1] "AMP PEAK  1(1P34.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE 
                           26                           100 
  AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE 
                           26                           100 
[1] "AMP PEAK  2(1Q21.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                           65                            61 
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                           65                            61 
[1] "AMP PEAK  3(2Q14.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  3(2Q14.2) MUTATED AMP PEAK  3(2Q14.2) WILD-TYPE 
                           41                            85 
  AMP PEAK  3(2Q14.2) MUTATED AMP PEAK  3(2Q14.2) WILD-TYPE 
                           41                            85 
[1] "AMP PEAK  4(3Q26.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE 
                           90                            36 
  AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE 
                           90                            36 
[1] "AMP PEAK  5(5P15.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  5(5P15.33) MUTATED AMP PEAK  5(5P15.33) WILD-TYPE 
                            73                             53 
  AMP PEAK  5(5P15.33) MUTATED AMP PEAK  5(5P15.33) WILD-TYPE 
                            73                             53 
[1] "AMP PEAK  6(6P21.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  6(6P21.1) MUTATED AMP PEAK  6(6P21.1) WILD-TYPE 
                           43                            83 
  AMP PEAK  6(6P21.1) MUTATED AMP PEAK  6(6P21.1) WILD-TYPE 
                           43                            83 
[1] "AMP PEAK  7(6Q23.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  7(6Q23.3) MUTATED AMP PEAK  7(6Q23.3) WILD-TYPE 
                           27                            99 
  AMP PEAK  7(6Q23.3) MUTATED AMP PEAK  7(6Q23.3) WILD-TYPE 
                           27                            99 
[1] "AMP PEAK  8(7P22.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  8(7P22.3) MUTATED AMP PEAK  8(7P22.3) WILD-TYPE 
                           85                            41 
  AMP PEAK  8(7P22.3) MUTATED AMP PEAK  8(7P22.3) WILD-TYPE 
                           85                            41 
[1] "AMP PEAK  9(7P11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  9(7P11.2) MUTATED AMP PEAK  9(7P11.2) WILD-TYPE 
                           83                            43 
  AMP PEAK  9(7P11.2) MUTATED AMP PEAK  9(7P11.2) WILD-TYPE 
                           83                            43 
[1] "AMP PEAK 10(7Q21.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 10(7Q21.2) MUTATED AMP PEAK 10(7Q21.2) WILD-TYPE 
                           79                            47 
  AMP PEAK 10(7Q21.2) MUTATED AMP PEAK 10(7Q21.2) WILD-TYPE 
                           79                            47 
[1] "AMP PEAK 11(8P11.23) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 11(8P11.23) MUTATED AMP PEAK 11(8P11.23) WILD-TYPE 
                            49                             77 
  AMP PEAK 11(8P11.23) MUTATED AMP PEAK 11(8P11.23) WILD-TYPE 
                            49                             77 
[1] "AMP PEAK 12(8P11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE 
                            58                             68 
  AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE 
                            58                             68 
[1] "AMP PEAK 13(8Q24.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE 
                            99                             27 
  AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE 
                            99                             27 
[1] "AMP PEAK 14(9P13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE 
                           27                            99 
  AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE 
                           27                            99 
[1] "AMP PEAK 15(10P11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 15(10P11.21) MUTATED AMP PEAK 15(10P11.21) WILD-TYPE 
                             34                              92 
  AMP PEAK 15(10P11.21) MUTATED AMP PEAK 15(10P11.21) WILD-TYPE 
                             34                              92 
[1] "AMP PEAK 16(11P13) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 16(11P13) MUTATED AMP PEAK 16(11P13) WILD-TYPE 
                          37                           89 
  AMP PEAK 16(11P13) MUTATED AMP PEAK 16(11P13) WILD-TYPE 
                          37                           89 
[1] "AMP PEAK 17(11Q13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE 
                            75                             51 
  AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE 
                            75                             51 
[1] "AMP PEAK 18(12P13.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE 
                             53                              73 
  AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE 
                             53                              73 
[1] "AMP PEAK 19(12P12.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE 
                            59                             67 
  AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE 
                            59                             67 
[1] "AMP PEAK 20(13Q22.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 20(13Q22.1) MUTATED AMP PEAK 20(13Q22.1) WILD-TYPE 
                            41                             85 
  AMP PEAK 20(13Q22.1) MUTATED AMP PEAK 20(13Q22.1) WILD-TYPE 
                            41                             85 
[1] "AMP PEAK 21(15Q26.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE 
                            42                             84 
  AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE 
                            42                             84 
[1] "AMP PEAK 22(17Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 22(17Q12) MUTATED AMP PEAK 22(17Q12) WILD-TYPE 
                          46                           80 
  AMP PEAK 22(17Q12) MUTATED AMP PEAK 22(17Q12) WILD-TYPE 
                          46                           80 
[1] "AMP PEAK 23(18P11.32) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE 
                             45                              81 
  AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE 
                             45                              81 
[1] "AMP PEAK 24(18Q11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE 
                            33                             93 
  AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE 
                            33                             93 
[1] "AMP PEAK 25(19P13.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 25(19P13.2) MUTATED AMP PEAK 25(19P13.2) WILD-TYPE 
                            22                            104 
  AMP PEAK 25(19P13.2) MUTATED AMP PEAK 25(19P13.2) WILD-TYPE 
                            22                            104 
[1] "AMP PEAK 26(19Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE 
                          32                           94 
  AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE 
                          32                           94 
[1] "DEL PEAK  1(1P36.13) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE 
                            43                             83 
  DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE 
                            43                             83 
[1] "DEL PEAK  2(1P13.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE 
                           44                            82 
  DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE 
                           44                            82 
[1] "DEL PEAK  3(1Q44) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE 
                         15                         111 
  DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE 
                         15                         111 
[1] "DEL PEAK  4(2Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE 
                           46                            80 
  DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE 
                           46                            80 
[1] "DEL PEAK  5(2Q33.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE 
                           25                           101 
  DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE 
                           25                           101 
[1] "DEL PEAK  6(3P25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE 
                           77                            49 
  DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE 
                           77                            49 
[1] "DEL PEAK  7(3P14.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE 
                           89                            37 
  DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE 
                           89                            37 
[1] "DEL PEAK  8(3P14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE 
                           89                            37 
  DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE 
                           89                            37 
[1] "DEL PEAK  9(3Q11.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE 
                           18                           108 
  DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE 
                           18                           108 
[1] "DEL PEAK 10(3Q26.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE 
                            11                            115 
  DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE 
                            11                            115 
[1] "DEL PEAK 11(4P15.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE 
                           68                            58 
  DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE 
                           68                            58 
[1] "DEL PEAK 12(4Q21.23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 12(4Q21.23) MUTATED DEL PEAK 12(4Q21.23) WILD-TYPE 
                            60                             66 
  DEL PEAK 12(4Q21.23) MUTATED DEL PEAK 12(4Q21.23) WILD-TYPE 
                            60                             66 
[1] "DEL PEAK 13(4Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 13(4Q22.1) MUTATED DEL PEAK 13(4Q22.1) WILD-TYPE 
                           67                            59 
  DEL PEAK 13(4Q22.1) MUTATED DEL PEAK 13(4Q22.1) WILD-TYPE 
                           67                            59 
[1] "DEL PEAK 14(4Q31.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 14(4Q31.3) MUTATED DEL PEAK 14(4Q31.3) WILD-TYPE 
                           65                            61 
  DEL PEAK 14(4Q31.3) MUTATED DEL PEAK 14(4Q31.3) WILD-TYPE 
                           65                            61 
[1] "DEL PEAK 15(5Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 15(5Q11.2) MUTATED DEL PEAK 15(5Q11.2) WILD-TYPE 
                           72                            54 
  DEL PEAK 15(5Q11.2) MUTATED DEL PEAK 15(5Q11.2) WILD-TYPE 
                           72                            54 
[1] "DEL PEAK 16(5Q15) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 16(5Q15) MUTATED DEL PEAK 16(5Q15) WILD-TYPE 
                         72                          54 
  DEL PEAK 16(5Q15) MUTATED DEL PEAK 16(5Q15) WILD-TYPE 
                         72                          54 
[1] "DEL PEAK 17(6P25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE 
                           45                            81 
  DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE 
                           45                            81 
[1] "DEL PEAK 18(6Q16.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 18(6Q16.3) MUTATED DEL PEAK 18(6Q16.3) WILD-TYPE 
                           40                            86 
  DEL PEAK 18(6Q16.3) MUTATED DEL PEAK 18(6Q16.3) WILD-TYPE 
                           40                            86 
[1] "DEL PEAK 19(6Q26) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE 
                         36                          90 
  DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE 
                         36                          90 
[1] "DEL PEAK 20(7Q31.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 20(7Q31.1) MUTATED DEL PEAK 20(7Q31.1) WILD-TYPE 
                           34                            92 
  DEL PEAK 20(7Q31.1) MUTATED DEL PEAK 20(7Q31.1) WILD-TYPE 
                           34                            92 
[1] "DEL PEAK 21(7Q36.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 21(7Q36.2) MUTATED DEL PEAK 21(7Q36.2) WILD-TYPE 
                           41                            85 
  DEL PEAK 21(7Q36.2) MUTATED DEL PEAK 21(7Q36.2) WILD-TYPE 
                           41                            85 
[1] "DEL PEAK 22(8P23.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE 
                           57                            69 
  DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE 
                           57                            69 
[1] "DEL PEAK 23(9P21.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE 
                           98                            28 
  DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE 
                           98                            28 
[1] "DEL PEAK 24(10P15.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 24(10P15.1) MUTATED DEL PEAK 24(10P15.1) WILD-TYPE 
                            35                             91 
  DEL PEAK 24(10P15.1) MUTATED DEL PEAK 24(10P15.1) WILD-TYPE 
                            35                             91 
[1] "DEL PEAK 25(10P11.21) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE 
                             32                              94 
  DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE 
                             32                              94 
[1] "DEL PEAK 26(10Q22.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 26(10Q22.3) MUTATED DEL PEAK 26(10Q22.3) WILD-TYPE 
                            39                             87 
  DEL PEAK 26(10Q22.3) MUTATED DEL PEAK 26(10Q22.3) WILD-TYPE 
                            39                             87 
[1] "DEL PEAK 27(10Q23.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE 
                             47                              79 
  DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE 
                             47                              79 
[1] "DEL PEAK 28(11P15.4) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE 
                            54                             72 
  DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE 
                            54                             72 
[1] "DEL PEAK 29(11Q24.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 29(11Q24.3) MUTATED DEL PEAK 29(11Q24.3) WILD-TYPE 
                            56                             70 
  DEL PEAK 29(11Q24.3) MUTATED DEL PEAK 29(11Q24.3) WILD-TYPE 
                            56                             70 
[1] "DEL PEAK 30(12Q21.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 30(12Q21.2) MUTATED DEL PEAK 30(12Q21.2) WILD-TYPE 
                            29                             97 
  DEL PEAK 30(12Q21.2) MUTATED DEL PEAK 30(12Q21.2) WILD-TYPE 
                            29                             97 
[1] "DEL PEAK 31(13Q12.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE 
                             56                              70 
  DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE 
                             56                              70 
[1] "DEL PEAK 32(13Q14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE 
                            59                             67 
  DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE 
                            59                             67 
[1] "DEL PEAK 33(13Q21.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 33(13Q21.2) MUTATED DEL PEAK 33(13Q21.2) WILD-TYPE 
                            51                             75 
  DEL PEAK 33(13Q21.2) MUTATED DEL PEAK 33(13Q21.2) WILD-TYPE 
                            51                             75 
[1] "DEL PEAK 34(14Q31.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 34(14Q31.1) MUTATED DEL PEAK 34(14Q31.1) WILD-TYPE 
                            44                             82 
  DEL PEAK 34(14Q31.1) MUTATED DEL PEAK 34(14Q31.1) WILD-TYPE 
                            44                             82 
[1] "DEL PEAK 35(15Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE 
                            41                             85 
  DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE 
                            41                             85 
[1] "DEL PEAK 36(16Q23.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 36(16Q23.1) MUTATED DEL PEAK 36(16Q23.1) WILD-TYPE 
                            53                             73 
  DEL PEAK 36(16Q23.1) MUTATED DEL PEAK 36(16Q23.1) WILD-TYPE 
                            53                             73 
[1] "DEL PEAK 37(17P11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 37(17P11.2) MUTATED DEL PEAK 37(17P11.2) WILD-TYPE 
                            57                             69 
  DEL PEAK 37(17P11.2) MUTATED DEL PEAK 37(17P11.2) WILD-TYPE 
                            57                             69 
[1] "DEL PEAK 38(17Q25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 38(17Q25.3) MUTATED DEL PEAK 38(17Q25.3) WILD-TYPE 
                            28                             98 
  DEL PEAK 38(17Q25.3) MUTATED DEL PEAK 38(17Q25.3) WILD-TYPE 
                            28                             98 
[1] "DEL PEAK 39(18Q12.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 39(18Q12.2) MUTATED DEL PEAK 39(18Q12.2) WILD-TYPE 
                            71                             55 
  DEL PEAK 39(18Q12.2) MUTATED DEL PEAK 39(18Q12.2) WILD-TYPE 
                            71                             55 
[1] "DEL PEAK 40(18Q21.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 40(18Q21.2) MUTATED DEL PEAK 40(18Q21.2) WILD-TYPE 
                            77                             49 
  DEL PEAK 40(18Q21.2) MUTATED DEL PEAK 40(18Q21.2) WILD-TYPE 
                            77                             49 
[1] "DEL PEAK 41(19P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE 
                            56                             70 
  DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE 
                            56                             70 
[1] "DEL PEAK 42(19Q13.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 42(19Q13.31) MUTATED DEL PEAK 42(19Q13.31) WILD-TYPE 
                             36                              90 
  DEL PEAK 42(19Q13.31) MUTATED DEL PEAK 42(19Q13.31) WILD-TYPE 
                             36                              90 
[1] "DEL PEAK 43(20P12.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 43(20P12.1) MUTATED DEL PEAK 43(20P12.1) WILD-TYPE 
                            23                            103 
  DEL PEAK 43(20P12.1) MUTATED DEL PEAK 43(20P12.1) WILD-TYPE 
                            23                            103 
[1] "DEL PEAK 44(21Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 44(21Q11.2) MUTATED DEL PEAK 44(21Q11.2) WILD-TYPE 
                            75                             51 
  DEL PEAK 44(21Q11.2) MUTATED DEL PEAK 44(21Q11.2) WILD-TYPE 
                            75                             51 
[1] "DEL PEAK 45(21Q22.12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 45(21Q22.12) MUTATED DEL PEAK 45(21Q22.12) WILD-TYPE 
                             73                              53 
  DEL PEAK 45(21Q22.12) MUTATED DEL PEAK 45(21Q22.12) WILD-TYPE 
                             73                              53 
[1] "DEL PEAK 46(22Q11.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 46(22Q11.1) MUTATED DEL PEAK 46(22Q11.1) WILD-TYPE 
                            50                             76 
  DEL PEAK 46(22Q11.1) MUTATED DEL PEAK 46(22Q11.1) WILD-TYPE 
                            50                             76 
[1] "DEL PEAK 47(XP21.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 47(XP21.1) MUTATED DEL PEAK 47(XP21.1) WILD-TYPE 
                           50                            76 
  DEL PEAK 47(XP21.1) MUTATED DEL PEAK 47(XP21.1) WILD-TYPE 
                           50                            76 
[1] "DEL PEAK 48(XP11.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 48(XP11.3) MUTATED DEL PEAK 48(XP11.3) WILD-TYPE 
                           52                            74 
  DEL PEAK 48(XP11.3) MUTATED DEL PEAK 48(XP11.3) WILD-TYPE 
                           52                            74 
[1] "DEL PEAK 49(XQ21.33) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 49(XQ21.33) MUTATED DEL PEAK 49(XQ21.33) WILD-TYPE 
                            26                            100 
  DEL PEAK 49(XQ21.33) MUTATED DEL PEAK 49(XQ21.33) WILD-TYPE 
                            26                            100 
[1] "terrence_modification_tag"
[1] TRUE
[1] "data2feature, selection=ALL"
[1] "CN_CNMF"                     "METHLYATION_CNMF"           
[3] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
[5] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[7] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 8 rows and 126 columns.

Variable 1:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'MRNASEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_MATURE_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
[1] "CN_CNMF"                     "METHLYATION_CNMF"           
[3] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
[5] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[7] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 126 columns, 0 survival variables, and 8 non-survival variables.
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = AMP PEAK  1(1P34.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED        7     10      9
  AMP PEAK  1(1P34.2) WILD-TYPE     35     42     23
D1V1, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           7                            35
  CLUS_2                          10                            42
  CLUS_3                           9                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       11      6      9
  AMP PEAK  1(1P34.2) WILD-TYPE     30     19     51
D1V2, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          11                            30
  CLUS_2                           6                            19
  CLUS_3                           9                            51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P34.2) MUTATED        3      3      2      4
  AMP PEAK  1(1P34.2) WILD-TYPE     12     20      5     21
D1V3, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           3                            12
  CLUS_2                           3                            20
  CLUS_3                           2                             5
  CLUS_4                           4                            21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P34.2) MUTATED        4      2      4      2
  AMP PEAK  1(1P34.2) WILD-TYPE     11     18     23      6
D1V4, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           4                            11
  CLUS_2                           2                            18
  CLUS_3                           4                            23
  CLUS_4                           2                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       13     12      1
  AMP PEAK  1(1P34.2) WILD-TYPE     34     56      9
D1V5, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          13                            34
  CLUS_2                          12                            56
  CLUS_3                           1                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P34.2) MUTATED       11      2      5      8
  AMP PEAK  1(1P34.2) WILD-TYPE     25     13     38     23
D1V6, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          11                            25
  CLUS_2                           2                            13
  CLUS_3                           5                            38
  CLUS_4                           8                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       13     11      2
  AMP PEAK  1(1P34.2) WILD-TYPE     32     53     14
D1V7, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          13                            32
  CLUS_2                          11                            53
  CLUS_3                           2                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       12      1     13
  AMP PEAK  1(1P34.2) WILD-TYPE     28      9     62
D1V8, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          12                            28
  CLUS_2                           1                             9
  CLUS_3                          13                            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(2) Variable = AMP PEAK  2(1Q21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q21.3) MUTATED       13     28     24
  AMP PEAK  2(1Q21.3) WILD-TYPE     29     24      8
D2V1, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          13                            29
  CLUS_2                          28                            24
  CLUS_3                          24                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q21.3) MUTATED       24      7     34
  AMP PEAK  2(1Q21.3) WILD-TYPE     17     18     26
D2V2, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          24                            17
  CLUS_2                           7                            18
  CLUS_3                          34                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1Q21.3) MUTATED        8     12      4     12
  AMP PEAK  2(1Q21.3) WILD-TYPE      7     11      3     13
D2V3, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                           8                             7
  CLUS_2                          12                            11
  CLUS_3                           4                             3
  CLUS_4                          12                            13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1Q21.3) MUTATED        9     11     13      3
  AMP PEAK  2(1Q21.3) WILD-TYPE      6      9     14      5
D2V4, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                           9                             6
  CLUS_2                          11                             9
  CLUS_3                          13                            14
  CLUS_4                           3                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q21.3) MUTATED       27     35      2
  AMP PEAK  2(1Q21.3) WILD-TYPE     20     33      8
D2V5, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          27                            20
  CLUS_2                          35                            33
  CLUS_3                           2                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1Q21.3) MUTATED       22      5     25     12
  AMP PEAK  2(1Q21.3) WILD-TYPE     14     10     18     19
D2V6, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          22                            14
  CLUS_2                           5                            10
  CLUS_3                          25                            18
  CLUS_4                          12                            19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q21.3) MUTATED       27     34      3
  AMP PEAK  2(1Q21.3) WILD-TYPE     18     30     13
D2V7, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          27                            18
  CLUS_2                          34                            30
  CLUS_3                           3                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q21.3) MUTATED       24      3     37
  AMP PEAK  2(1Q21.3) WILD-TYPE     16      7     38
D2V8, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          24                            16
  CLUS_2                           3                             7
  CLUS_3                          37                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(3) Variable = AMP PEAK  3(2Q14.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q14.2) MUTATED       11     19     11
  AMP PEAK  3(2Q14.2) WILD-TYPE     31     33     21
D3V1, multiclass
        clus
vv       AMP PEAK  3(2Q14.2) MUTATED AMP PEAK  3(2Q14.2) WILD-TYPE
  CLUS_1                          11                            31
  CLUS_2                          19                            33
  CLUS_3                          11                            21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q14.2) MUTATED       10     10     21
  AMP PEAK  3(2Q14.2) WILD-TYPE     31     15     39
D3V2, multiclass
        clus
vv       AMP PEAK  3(2Q14.2) MUTATED AMP PEAK  3(2Q14.2) WILD-TYPE
  CLUS_1                          10                            31
  CLUS_2                          10                            15
  CLUS_3                          21                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(2Q14.2) MUTATED        4     10      3      7
  AMP PEAK  3(2Q14.2) WILD-TYPE     11     13      4     18
D3V3, multiclass
        clus
vv       AMP PEAK  3(2Q14.2) MUTATED AMP PEAK  3(2Q14.2) WILD-TYPE
  CLUS_1                           4                            11
  CLUS_2                          10                            13
  CLUS_3                           3                             4
  CLUS_4                           7                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(2Q14.2) MUTATED        5      8      9      2
  AMP PEAK  3(2Q14.2) WILD-TYPE     10     12     18      6
D3V4, multiclass
        clus
vv       AMP PEAK  3(2Q14.2) MUTATED AMP PEAK  3(2Q14.2) WILD-TYPE
  CLUS_1                           5                            10
  CLUS_2                           8                            12
  CLUS_3                           9                            18
  CLUS_4                           2                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q14.2) MUTATED       14     25      2
  AMP PEAK  3(2Q14.2) WILD-TYPE     33     43      8
D3V5, multiclass
        clus
vv       AMP PEAK  3(2Q14.2) MUTATED AMP PEAK  3(2Q14.2) WILD-TYPE
  CLUS_1                          14                            33
  CLUS_2                          25                            43
  CLUS_3                           2                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(2Q14.2) MUTATED       10      4     18      9
  AMP PEAK  3(2Q14.2) WILD-TYPE     26     11     25     22
D3V6, multiclass
        clus
vv       AMP PEAK  3(2Q14.2) MUTATED AMP PEAK  3(2Q14.2) WILD-TYPE
  CLUS_1                          10                            26
  CLUS_2                           4                            11
  CLUS_3                          18                            25
  CLUS_4                           9                            22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q14.2) MUTATED       12     24      5
  AMP PEAK  3(2Q14.2) WILD-TYPE     33     40     11
D3V7, multiclass
        clus
vv       AMP PEAK  3(2Q14.2) MUTATED AMP PEAK  3(2Q14.2) WILD-TYPE
  CLUS_1                          12                            33
  CLUS_2                          24                            40
  CLUS_3                           5                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q14.2) MUTATED       11      3     27
  AMP PEAK  3(2Q14.2) WILD-TYPE     29      7     48
D3V8, multiclass
        clus
vv       AMP PEAK  3(2Q14.2) MUTATED AMP PEAK  3(2Q14.2) WILD-TYPE
  CLUS_1                          11                            29
  CLUS_2                           3                             7
  CLUS_3                          27                            48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(4) Variable = AMP PEAK  4(3Q26.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3Q26.2) MUTATED       15     52     23
  AMP PEAK  4(3Q26.2) WILD-TYPE     27      0      9
D4V1, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          15                            27
  CLUS_2                          52                             0
  CLUS_3                          23                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3Q26.2) MUTATED       19     15     56
  AMP PEAK  4(3Q26.2) WILD-TYPE     22     10      4
D4V2, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          19                            22
  CLUS_2                          15                            10
  CLUS_3                          56                             4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3Q26.2) MUTATED       14     21      5     13
  AMP PEAK  4(3Q26.2) WILD-TYPE      1      2      2     12
D4V3, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          14                             1
  CLUS_2                          21                             2
  CLUS_3                           5                             2
  CLUS_4                          13                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3Q26.2) MUTATED       15     18     13      7
  AMP PEAK  4(3Q26.2) WILD-TYPE      0      2     14      1
D4V4, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          15                             0
  CLUS_2                          18                             2
  CLUS_3                          13                            14
  CLUS_4                           7                             1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3Q26.2) MUTATED       22     62      5
  AMP PEAK  4(3Q26.2) WILD-TYPE     25      6      5
D4V5, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          22                            25
  CLUS_2                          62                             6
  CLUS_3                           5                             5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3Q26.2) MUTATED       17      5     41     26
  AMP PEAK  4(3Q26.2) WILD-TYPE     19     10      2      5
D4V6, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          17                            19
  CLUS_2                           5                            10
  CLUS_3                          41                             2
  CLUS_4                          26                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3Q26.2) MUTATED       21     59      9
  AMP PEAK  4(3Q26.2) WILD-TYPE     24      5      7
D4V7, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          21                            24
  CLUS_2                          59                             5
  CLUS_3                           9                             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3Q26.2) MUTATED       19      3     67
  AMP PEAK  4(3Q26.2) WILD-TYPE     21      7      8
D4V8, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          19                            21
  CLUS_2                           3                             7
  CLUS_3                          67                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(5) Variable = AMP PEAK  5(5P15.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(5P15.33) MUTATED       16     40     17
  AMP PEAK  5(5P15.33) WILD-TYPE     26     12     15
D5V1, multiclass
        clus
vv       AMP PEAK  5(5P15.33) MUTATED AMP PEAK  5(5P15.33) WILD-TYPE
  CLUS_1                           16                             26
  CLUS_2                           40                             12
  CLUS_3                           17                             15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(5P15.33) MUTATED       20     12     41
  AMP PEAK  5(5P15.33) WILD-TYPE     21     13     19
D5V2, multiclass
        clus
vv       AMP PEAK  5(5P15.33) MUTATED AMP PEAK  5(5P15.33) WILD-TYPE
  CLUS_1                           20                             21
  CLUS_2                           12                             13
  CLUS_3                           41                             19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(5P15.33) MUTATED        9     17      6     10
  AMP PEAK  5(5P15.33) WILD-TYPE      6      6      1     15
D5V3, multiclass
        clus
vv       AMP PEAK  5(5P15.33) MUTATED AMP PEAK  5(5P15.33) WILD-TYPE
  CLUS_1                            9                              6
  CLUS_2                           17                              6
  CLUS_3                            6                              1
  CLUS_4                           10                             15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(5P15.33) MUTATED       11     15     11      5
  AMP PEAK  5(5P15.33) WILD-TYPE      4      5     16      3
D5V4, multiclass
        clus
vv       AMP PEAK  5(5P15.33) MUTATED AMP PEAK  5(5P15.33) WILD-TYPE
  CLUS_1                           11                              4
  CLUS_2                           15                              5
  CLUS_3                           11                             16
  CLUS_4                            5                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(5P15.33) MUTATED       22     48      3
  AMP PEAK  5(5P15.33) WILD-TYPE     25     20      7
D5V5, multiclass
        clus
vv       AMP PEAK  5(5P15.33) MUTATED AMP PEAK  5(5P15.33) WILD-TYPE
  CLUS_1                           22                             25
  CLUS_2                           48                             20
  CLUS_3                            3                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(5P15.33) MUTATED       18      4     30     21
  AMP PEAK  5(5P15.33) WILD-TYPE     18     11     13     10
D5V6, multiclass
        clus
vv       AMP PEAK  5(5P15.33) MUTATED AMP PEAK  5(5P15.33) WILD-TYPE
  CLUS_1                           18                             18
  CLUS_2                            4                             11
  CLUS_3                           30                             13
  CLUS_4                           21                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(5P15.33) MUTATED       22     46      5
  AMP PEAK  5(5P15.33) WILD-TYPE     23     18     11
D5V7, multiclass
        clus
vv       AMP PEAK  5(5P15.33) MUTATED AMP PEAK  5(5P15.33) WILD-TYPE
  CLUS_1                           22                             23
  CLUS_2                           46                             18
  CLUS_3                            5                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(5P15.33) MUTATED       20      2     51
  AMP PEAK  5(5P15.33) WILD-TYPE     20      8     24
D5V8, multiclass
        clus
vv       AMP PEAK  5(5P15.33) MUTATED AMP PEAK  5(5P15.33) WILD-TYPE
  CLUS_1                           20                             20
  CLUS_2                            2                              8
  CLUS_3                           51                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(6) Variable = AMP PEAK  6(6P21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(6P21.1) MUTATED       10     15     18
  AMP PEAK  6(6P21.1) WILD-TYPE     32     37     14
D6V1, multiclass
        clus
vv       AMP PEAK  6(6P21.1) MUTATED AMP PEAK  6(6P21.1) WILD-TYPE
  CLUS_1                          10                            32
  CLUS_2                          15                            37
  CLUS_3                          18                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(6P21.1) MUTATED       18      7     18
  AMP PEAK  6(6P21.1) WILD-TYPE     23     18     42
D6V2, multiclass
        clus
vv       AMP PEAK  6(6P21.1) MUTATED AMP PEAK  6(6P21.1) WILD-TYPE
  CLUS_1                          18                            23
  CLUS_2                           7                            18
  CLUS_3                          18                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(6P21.1) MUTATED        4      5      4     10
  AMP PEAK  6(6P21.1) WILD-TYPE     11     18      3     15
D6V3, multiclass
        clus
vv       AMP PEAK  6(6P21.1) MUTATED AMP PEAK  6(6P21.1) WILD-TYPE
  CLUS_1                           4                            11
  CLUS_2                           5                            18
  CLUS_3                           4                             3
  CLUS_4                          10                            15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(6P21.1) MUTATED        5      5     11      2
  AMP PEAK  6(6P21.1) WILD-TYPE     10     15     16      6
D6V4, multiclass
        clus
vv       AMP PEAK  6(6P21.1) MUTATED AMP PEAK  6(6P21.1) WILD-TYPE
  CLUS_1                           5                            10
  CLUS_2                           5                            15
  CLUS_3                          11                            16
  CLUS_4                           2                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(6P21.1) MUTATED       22     19      1
  AMP PEAK  6(6P21.1) WILD-TYPE     25     49      9
D6V5, multiclass
        clus
vv       AMP PEAK  6(6P21.1) MUTATED AMP PEAK  6(6P21.1) WILD-TYPE
  CLUS_1                          22                            25
  CLUS_2                          19                            49
  CLUS_3                           1                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(6P21.1) MUTATED       18      4      8     12
  AMP PEAK  6(6P21.1) WILD-TYPE     18     11     35     19
D6V6, multiclass
        clus
vv       AMP PEAK  6(6P21.1) MUTATED AMP PEAK  6(6P21.1) WILD-TYPE
  CLUS_1                          18                            18
  CLUS_2                           4                            11
  CLUS_3                           8                            35
  CLUS_4                          12                            19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(6P21.1) MUTATED       22     18      2
  AMP PEAK  6(6P21.1) WILD-TYPE     23     46     14
D6V7, multiclass
        clus
vv       AMP PEAK  6(6P21.1) MUTATED AMP PEAK  6(6P21.1) WILD-TYPE
  CLUS_1                          22                            23
  CLUS_2                          18                            46
  CLUS_3                           2                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(6P21.1) MUTATED       20      2     20
  AMP PEAK  6(6P21.1) WILD-TYPE     20      8     55
D6V8, multiclass
        clus
vv       AMP PEAK  6(6P21.1) MUTATED AMP PEAK  6(6P21.1) WILD-TYPE
  CLUS_1                          20                            20
  CLUS_2                           2                             8
  CLUS_3                          20                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(7) Variable = AMP PEAK  7(6Q23.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(6Q23.3) MUTATED        8      7     12
  AMP PEAK  7(6Q23.3) WILD-TYPE     34     45     20
D7V1, multiclass
        clus
vv       AMP PEAK  7(6Q23.3) MUTATED AMP PEAK  7(6Q23.3) WILD-TYPE
  CLUS_1                           8                            34
  CLUS_2                           7                            45
  CLUS_3                          12                            20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(6Q23.3) MUTATED       13      4     10
  AMP PEAK  7(6Q23.3) WILD-TYPE     28     21     50
D7V2, multiclass
        clus
vv       AMP PEAK  7(6Q23.3) MUTATED AMP PEAK  7(6Q23.3) WILD-TYPE
  CLUS_1                          13                            28
  CLUS_2                           4                            21
  CLUS_3                          10                            50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(6Q23.3) MUTATED        3      0      3      7
  AMP PEAK  7(6Q23.3) WILD-TYPE     12     23      4     18
D7V3, multiclass
        clus
vv       AMP PEAK  7(6Q23.3) MUTATED AMP PEAK  7(6Q23.3) WILD-TYPE
  CLUS_1                           3                            12
  CLUS_2                           0                            23
  CLUS_3                           3                             4
  CLUS_4                           7                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(6Q23.3) MUTATED        3      0      8      2
  AMP PEAK  7(6Q23.3) WILD-TYPE     12     20     19      6
D7V4, multiclass
        clus
vv       AMP PEAK  7(6Q23.3) MUTATED AMP PEAK  7(6Q23.3) WILD-TYPE
  CLUS_1                           3                            12
  CLUS_2                           0                            20
  CLUS_3                           8                            19
  CLUS_4                           2                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(6Q23.3) MUTATED       14     11      1
  AMP PEAK  7(6Q23.3) WILD-TYPE     33     57      9
D7V5, multiclass
        clus
vv       AMP PEAK  7(6Q23.3) MUTATED AMP PEAK  7(6Q23.3) WILD-TYPE
  CLUS_1                          14                            33
  CLUS_2                          11                            57
  CLUS_3                           1                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(6Q23.3) MUTATED       12      2      6      6
  AMP PEAK  7(6Q23.3) WILD-TYPE     24     13     37     25
D7V6, multiclass
        clus
vv       AMP PEAK  7(6Q23.3) MUTATED AMP PEAK  7(6Q23.3) WILD-TYPE
  CLUS_1                          12                            24
  CLUS_2                           2                            13
  CLUS_3                           6                            37
  CLUS_4                           6                            25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(6Q23.3) MUTATED       14     10      2
  AMP PEAK  7(6Q23.3) WILD-TYPE     31     54     14
D7V7, multiclass
        clus
vv       AMP PEAK  7(6Q23.3) MUTATED AMP PEAK  7(6Q23.3) WILD-TYPE
  CLUS_1                          14                            31
  CLUS_2                          10                            54
  CLUS_3                           2                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(6Q23.3) MUTATED       13      1     12
  AMP PEAK  7(6Q23.3) WILD-TYPE     27      9     63
D7V8, multiclass
        clus
vv       AMP PEAK  7(6Q23.3) MUTATED AMP PEAK  7(6Q23.3) WILD-TYPE
  CLUS_1                          13                            27
  CLUS_2                           1                             9
  CLUS_3                          12                            63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(8) Variable = AMP PEAK  8(7P22.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(7P22.3) MUTATED       23     37     25
  AMP PEAK  8(7P22.3) WILD-TYPE     19     15      7
D8V1, multiclass
        clus
vv       AMP PEAK  8(7P22.3) MUTATED AMP PEAK  8(7P22.3) WILD-TYPE
  CLUS_1                          23                            19
  CLUS_2                          37                            15
  CLUS_3                          25                             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(7P22.3) MUTATED       31     15     39
  AMP PEAK  8(7P22.3) WILD-TYPE     10     10     21
D8V2, multiclass
        clus
vv       AMP PEAK  8(7P22.3) MUTATED AMP PEAK  8(7P22.3) WILD-TYPE
  CLUS_1                          31                            10
  CLUS_2                          15                            10
  CLUS_3                          39                            21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(7P22.3) MUTATED        5     20      7     19
  AMP PEAK  8(7P22.3) WILD-TYPE     10      3      0      6
D8V3, multiclass
        clus
vv       AMP PEAK  8(7P22.3) MUTATED AMP PEAK  8(7P22.3) WILD-TYPE
  CLUS_1                           5                            10
  CLUS_2                          20                             3
  CLUS_3                           7                             0
  CLUS_4                          19                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(7P22.3) MUTATED       11     17     21      2
  AMP PEAK  8(7P22.3) WILD-TYPE      4      3      6      6
D8V4, multiclass
        clus
vv       AMP PEAK  8(7P22.3) MUTATED AMP PEAK  8(7P22.3) WILD-TYPE
  CLUS_1                          11                             4
  CLUS_2                          17                             3
  CLUS_3                          21                             6
  CLUS_4                           2                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(7P22.3) MUTATED       37     46      2
  AMP PEAK  8(7P22.3) WILD-TYPE     10     22      8
D8V5, multiclass
        clus
vv       AMP PEAK  8(7P22.3) MUTATED AMP PEAK  8(7P22.3) WILD-TYPE
  CLUS_1                          37                            10
  CLUS_2                          46                            22
  CLUS_3                           2                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(7P22.3) MUTATED       27     10     29     19
  AMP PEAK  8(7P22.3) WILD-TYPE      9      5     14     12
D8V6, multiclass
        clus
vv       AMP PEAK  8(7P22.3) MUTATED AMP PEAK  8(7P22.3) WILD-TYPE
  CLUS_1                          27                             9
  CLUS_2                          10                             5
  CLUS_3                          29                            14
  CLUS_4                          19                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(7P22.3) MUTATED       35     44      6
  AMP PEAK  8(7P22.3) WILD-TYPE     10     20     10
D8V7, multiclass
        clus
vv       AMP PEAK  8(7P22.3) MUTATED AMP PEAK  8(7P22.3) WILD-TYPE
  CLUS_1                          35                            10
  CLUS_2                          44                            20
  CLUS_3                           6                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(7P22.3) MUTATED       31      6     48
  AMP PEAK  8(7P22.3) WILD-TYPE      9      4     27
D8V8, multiclass
        clus
vv       AMP PEAK  8(7P22.3) MUTATED AMP PEAK  8(7P22.3) WILD-TYPE
  CLUS_1                          31                             9
  CLUS_2                           6                             4
  CLUS_3                          48                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(9) Variable = AMP PEAK  9(7P11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(7P11.2) MUTATED       23     36     24
  AMP PEAK  9(7P11.2) WILD-TYPE     19     16      8
D9V1, multiclass
        clus
vv       AMP PEAK  9(7P11.2) MUTATED AMP PEAK  9(7P11.2) WILD-TYPE
  CLUS_1                          23                            19
  CLUS_2                          36                            16
  CLUS_3                          24                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(7P11.2) MUTATED       31     15     37
  AMP PEAK  9(7P11.2) WILD-TYPE     10     10     23
D9V2, multiclass
        clus
vv       AMP PEAK  9(7P11.2) MUTATED AMP PEAK  9(7P11.2) WILD-TYPE
  CLUS_1                          31                            10
  CLUS_2                          15                            10
  CLUS_3                          37                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(7P11.2) MUTATED        7     20      6     20
  AMP PEAK  9(7P11.2) WILD-TYPE      8      3      1      5
D9V3, multiclass
        clus
vv       AMP PEAK  9(7P11.2) MUTATED AMP PEAK  9(7P11.2) WILD-TYPE
  CLUS_1                           7                             8
  CLUS_2                          20                             3
  CLUS_3                           6                             1
  CLUS_4                          20                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(7P11.2) MUTATED        9     17     22      5
  AMP PEAK  9(7P11.2) WILD-TYPE      6      3      5      3
D9V4, multiclass
        clus
vv       AMP PEAK  9(7P11.2) MUTATED AMP PEAK  9(7P11.2) WILD-TYPE
  CLUS_1                           9                             6
  CLUS_2                          17                             3
  CLUS_3                          22                             5
  CLUS_4                           5                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(7P11.2) MUTATED       36     43      3
  AMP PEAK  9(7P11.2) WILD-TYPE     11     25      7
D9V5, multiclass
        clus
vv       AMP PEAK  9(7P11.2) MUTATED AMP PEAK  9(7P11.2) WILD-TYPE
  CLUS_1                          36                            11
  CLUS_2                          43                            25
  CLUS_3                           3                             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(7P11.2) MUTATED       26     11     27     18
  AMP PEAK  9(7P11.2) WILD-TYPE     10      4     16     13
D9V6, multiclass
        clus
vv       AMP PEAK  9(7P11.2) MUTATED AMP PEAK  9(7P11.2) WILD-TYPE
  CLUS_1                          26                            10
  CLUS_2                          11                             4
  CLUS_3                          27                            16
  CLUS_4                          18                            13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(7P11.2) MUTATED       34     42      6
  AMP PEAK  9(7P11.2) WILD-TYPE     11     22     10
D9V7, multiclass
        clus
vv       AMP PEAK  9(7P11.2) MUTATED AMP PEAK  9(7P11.2) WILD-TYPE
  CLUS_1                          34                            11
  CLUS_2                          42                            22
  CLUS_3                           6                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(7P11.2) MUTATED       30      6     46
  AMP PEAK  9(7P11.2) WILD-TYPE     10      4     29
D9V8, multiclass
        clus
vv       AMP PEAK  9(7P11.2) MUTATED AMP PEAK  9(7P11.2) WILD-TYPE
  CLUS_1                          30                            10
  CLUS_2                           6                             4
  CLUS_3                          46                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(10) Variable = AMP PEAK 10(7Q21.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(7Q21.2) MUTATED       21     34     24
  AMP PEAK 10(7Q21.2) WILD-TYPE     21     18      8
D10V1, multiclass
        clus
vv       AMP PEAK 10(7Q21.2) MUTATED AMP PEAK 10(7Q21.2) WILD-TYPE
  CLUS_1                          21                            21
  CLUS_2                          34                            18
  CLUS_3                          24                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(7Q21.2) MUTATED       29     11     39
  AMP PEAK 10(7Q21.2) WILD-TYPE     12     14     21
D10V2, multiclass
        clus
vv       AMP PEAK 10(7Q21.2) MUTATED AMP PEAK 10(7Q21.2) WILD-TYPE
  CLUS_1                          29                            12
  CLUS_2                          11                            14
  CLUS_3                          39                            21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(7Q21.2) MUTATED        9     15      5     17
  AMP PEAK 10(7Q21.2) WILD-TYPE      6      8      2      8
D10V3, multiclass
        clus
vv       AMP PEAK 10(7Q21.2) MUTATED AMP PEAK 10(7Q21.2) WILD-TYPE
  CLUS_1                           9                             6
  CLUS_2                          15                             8
  CLUS_3                           5                             2
  CLUS_4                          17                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(7Q21.2) MUTATED       10     13     18      5
  AMP PEAK 10(7Q21.2) WILD-TYPE      5      7      9      3
D10V4, multiclass
        clus
vv       AMP PEAK 10(7Q21.2) MUTATED AMP PEAK 10(7Q21.2) WILD-TYPE
  CLUS_1                          10                             5
  CLUS_2                          13                             7
  CLUS_3                          18                             9
  CLUS_4                           5                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(7Q21.2) MUTATED       33     41      4
  AMP PEAK 10(7Q21.2) WILD-TYPE     14     27      6
D10V5, multiclass
        clus
vv       AMP PEAK 10(7Q21.2) MUTATED AMP PEAK 10(7Q21.2) WILD-TYPE
  CLUS_1                          33                            14
  CLUS_2                          41                            27
  CLUS_3                           4                             6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(7Q21.2) MUTATED       24      9     24     21
  AMP PEAK 10(7Q21.2) WILD-TYPE     12      6     19     10
D10V6, multiclass
        clus
vv       AMP PEAK 10(7Q21.2) MUTATED AMP PEAK 10(7Q21.2) WILD-TYPE
  CLUS_1                          24                            12
  CLUS_2                           9                             6
  CLUS_3                          24                            19
  CLUS_4                          21                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(7Q21.2) MUTATED       31     41      6
  AMP PEAK 10(7Q21.2) WILD-TYPE     14     23     10
D10V7, multiclass
        clus
vv       AMP PEAK 10(7Q21.2) MUTATED AMP PEAK 10(7Q21.2) WILD-TYPE
  CLUS_1                          31                            14
  CLUS_2                          41                            23
  CLUS_3                           6                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(7Q21.2) MUTATED       28      5     45
  AMP PEAK 10(7Q21.2) WILD-TYPE     12      5     30
D10V8, multiclass
        clus
vv       AMP PEAK 10(7Q21.2) MUTATED AMP PEAK 10(7Q21.2) WILD-TYPE
  CLUS_1                          28                            12
  CLUS_2                           5                             5
  CLUS_3                          45                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(11) Variable = AMP PEAK 11(8P11.23) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(8P11.23) MUTATED       10     20     19
  AMP PEAK 11(8P11.23) WILD-TYPE     32     32     13
D11V1, multiclass
        clus
vv       AMP PEAK 11(8P11.23) MUTATED AMP PEAK 11(8P11.23) WILD-TYPE
  CLUS_1                           10                             32
  CLUS_2                           20                             32
  CLUS_3                           19                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(8P11.23) MUTATED       18      6     25
  AMP PEAK 11(8P11.23) WILD-TYPE     23     19     35
D11V2, multiclass
        clus
vv       AMP PEAK 11(8P11.23) MUTATED AMP PEAK 11(8P11.23) WILD-TYPE
  CLUS_1                           18                             23
  CLUS_2                            6                             19
  CLUS_3                           25                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(8P11.23) MUTATED        8      6      4     10
  AMP PEAK 11(8P11.23) WILD-TYPE      7     17      3     15
D11V3, multiclass
        clus
vv       AMP PEAK 11(8P11.23) MUTATED AMP PEAK 11(8P11.23) WILD-TYPE
  CLUS_1                            8                              7
  CLUS_2                            6                             17
  CLUS_3                            4                              3
  CLUS_4                           10                             15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(8P11.23) MUTATED        9      5     11      3
  AMP PEAK 11(8P11.23) WILD-TYPE      6     15     16      5
D11V4, multiclass
        clus
vv       AMP PEAK 11(8P11.23) MUTATED AMP PEAK 11(8P11.23) WILD-TYPE
  CLUS_1                            9                              6
  CLUS_2                            5                             15
  CLUS_3                           11                             16
  CLUS_4                            3                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(8P11.23) MUTATED       19     27      2
  AMP PEAK 11(8P11.23) WILD-TYPE     28     41      8
D11V5, multiclass
        clus
vv       AMP PEAK 11(8P11.23) MUTATED AMP PEAK 11(8P11.23) WILD-TYPE
  CLUS_1                           19                             28
  CLUS_2                           27                             41
  CLUS_3                            2                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(8P11.23) MUTATED       16      3     20      9
  AMP PEAK 11(8P11.23) WILD-TYPE     20     12     23     22
D11V6, multiclass
        clus
vv       AMP PEAK 11(8P11.23) MUTATED AMP PEAK 11(8P11.23) WILD-TYPE
  CLUS_1                           16                             20
  CLUS_2                            3                             12
  CLUS_3                           20                             23
  CLUS_4                            9                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(8P11.23) MUTATED       19     26      3
  AMP PEAK 11(8P11.23) WILD-TYPE     26     38     13
D11V7, multiclass
        clus
vv       AMP PEAK 11(8P11.23) MUTATED AMP PEAK 11(8P11.23) WILD-TYPE
  CLUS_1                           19                             26
  CLUS_2                           26                             38
  CLUS_3                            3                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(8P11.23) MUTATED       19      0     29
  AMP PEAK 11(8P11.23) WILD-TYPE     21     10     46
D11V8, multiclass
        clus
vv       AMP PEAK 11(8P11.23) MUTATED AMP PEAK 11(8P11.23) WILD-TYPE
  CLUS_1                           19                             21
  CLUS_2                            0                             10
  CLUS_3                           29                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(12) Variable = AMP PEAK 12(8P11.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8P11.21) MUTATED       13     22     23
  AMP PEAK 12(8P11.21) WILD-TYPE     29     30      9
D12V1, multiclass
        clus
vv       AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE
  CLUS_1                           13                             29
  CLUS_2                           22                             30
  CLUS_3                           23                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8P11.21) MUTATED       21      9     28
  AMP PEAK 12(8P11.21) WILD-TYPE     20     16     32
D12V2, multiclass
        clus
vv       AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE
  CLUS_1                           21                             20
  CLUS_2                            9                             16
  CLUS_3                           28                             32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(8P11.21) MUTATED       10      8      3     14
  AMP PEAK 12(8P11.21) WILD-TYPE      5     15      4     11
D12V3, multiclass
        clus
vv       AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE
  CLUS_1                           10                              5
  CLUS_2                            8                             15
  CLUS_3                            3                              4
  CLUS_4                           14                             11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(8P11.21) MUTATED       11      6     14      4
  AMP PEAK 12(8P11.21) WILD-TYPE      4     14     13      4
D12V4, multiclass
        clus
vv       AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE
  CLUS_1                           11                              4
  CLUS_2                            6                             14
  CLUS_3                           14                             13
  CLUS_4                            4                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8P11.21) MUTATED       23     31      3
  AMP PEAK 12(8P11.21) WILD-TYPE     24     37      7
D12V5, multiclass
        clus
vv       AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE
  CLUS_1                           23                             24
  CLUS_2                           31                             37
  CLUS_3                            3                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(8P11.21) MUTATED       18      5     20     14
  AMP PEAK 12(8P11.21) WILD-TYPE     18     10     23     17
D12V6, multiclass
        clus
vv       AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE
  CLUS_1                           18                             18
  CLUS_2                            5                             10
  CLUS_3                           20                             23
  CLUS_4                           14                             17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8P11.21) MUTATED       22     30      5
  AMP PEAK 12(8P11.21) WILD-TYPE     23     34     11
D12V7, multiclass
        clus
vv       AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE
  CLUS_1                           22                             23
  CLUS_2                           30                             34
  CLUS_3                            5                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8P11.21) MUTATED       21      2     34
  AMP PEAK 12(8P11.21) WILD-TYPE     19      8     41
D12V8, multiclass
        clus
vv       AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE
  CLUS_1                           21                             19
  CLUS_2                            2                              8
  CLUS_3                           34                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(13) Variable = AMP PEAK 13(8Q24.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8Q24.21) MUTATED       25     44     30
  AMP PEAK 13(8Q24.21) WILD-TYPE     17      8      2
D13V1, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           25                             17
  CLUS_2                           44                              8
  CLUS_3                           30                              2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8Q24.21) MUTATED       30     16     53
  AMP PEAK 13(8Q24.21) WILD-TYPE     11      9      7
D13V2, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           30                             11
  CLUS_2                           16                              9
  CLUS_3                           53                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8Q24.21) MUTATED       12     22      5     19
  AMP PEAK 13(8Q24.21) WILD-TYPE      3      1      2      6
D13V3, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           12                              3
  CLUS_2                           22                              1
  CLUS_3                            5                              2
  CLUS_4                           19                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8Q24.21) MUTATED       13     19     20      6
  AMP PEAK 13(8Q24.21) WILD-TYPE      2      1      7      2
D13V4, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           13                              2
  CLUS_2                           19                              1
  CLUS_3                           20                              7
  CLUS_4                            6                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8Q24.21) MUTATED       35     59      4
  AMP PEAK 13(8Q24.21) WILD-TYPE     12      9      6
D13V5, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           35                             12
  CLUS_2                           59                              9
  CLUS_3                            4                              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8Q24.21) MUTATED       28      7     35     28
  AMP PEAK 13(8Q24.21) WILD-TYPE      8      8      8      3
D13V6, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           28                              8
  CLUS_2                            7                              8
  CLUS_3                           35                              8
  CLUS_4                           28                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8Q24.21) MUTATED       34     55      9
  AMP PEAK 13(8Q24.21) WILD-TYPE     11      9      7
D13V7, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           34                             11
  CLUS_2                           55                              9
  CLUS_3                            9                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8Q24.21) MUTATED       32      3     63
  AMP PEAK 13(8Q24.21) WILD-TYPE      8      7     12
D13V8, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           32                              8
  CLUS_2                            3                              7
  CLUS_3                           63                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(14) Variable = AMP PEAK 14(9P13.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(9P13.3) MUTATED        8     10      9
  AMP PEAK 14(9P13.3) WILD-TYPE     34     42     23
D14V1, multiclass
        clus
vv       AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE
  CLUS_1                           8                            34
  CLUS_2                          10                            42
  CLUS_3                           9                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(9P13.3) MUTATED       12      2     13
  AMP PEAK 14(9P13.3) WILD-TYPE     29     23     47
D14V2, multiclass
        clus
vv       AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE
  CLUS_1                          12                            29
  CLUS_2                           2                            23
  CLUS_3                          13                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(9P13.3) MUTATED        4      3      3      5
  AMP PEAK 14(9P13.3) WILD-TYPE     11     20      4     20
D14V3, multiclass
        clus
vv       AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE
  CLUS_1                           4                            11
  CLUS_2                           3                            20
  CLUS_3                           3                             4
  CLUS_4                           5                            20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(9P13.3) MUTATED        5      3      7      0
  AMP PEAK 14(9P13.3) WILD-TYPE     10     17     20      8
D14V4, multiclass
        clus
vv       AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE
  CLUS_1                           5                            10
  CLUS_2                           3                            17
  CLUS_3                           7                            20
  CLUS_4                           0                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(9P13.3) MUTATED       12     13      2
  AMP PEAK 14(9P13.3) WILD-TYPE     35     55      8
D14V5, multiclass
        clus
vv       AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE
  CLUS_1                          12                            35
  CLUS_2                          13                            55
  CLUS_3                           2                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(9P13.3) MUTATED       10      2     12      3
  AMP PEAK 14(9P13.3) WILD-TYPE     26     13     31     28
D14V6, multiclass
        clus
vv       AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE
  CLUS_1                          10                            26
  CLUS_2                           2                            13
  CLUS_3                          12                            31
  CLUS_4                           3                            28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(9P13.3) MUTATED       11     13      3
  AMP PEAK 14(9P13.3) WILD-TYPE     34     51     13
D14V7, multiclass
        clus
vv       AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE
  CLUS_1                          11                            34
  CLUS_2                          13                            51
  CLUS_3                           3                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(9P13.3) MUTATED       10      2     15
  AMP PEAK 14(9P13.3) WILD-TYPE     30      8     60
D14V8, multiclass
        clus
vv       AMP PEAK 14(9P13.3) MUTATED AMP PEAK 14(9P13.3) WILD-TYPE
  CLUS_1                          10                            30
  CLUS_2                           2                             8
  CLUS_3                          15                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(15) Variable = AMP PEAK 15(10P11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(10P11.21) MUTATED       10     13     11
  AMP PEAK 15(10P11.21) WILD-TYPE     32     39     21
D15V1, multiclass
        clus
vv       AMP PEAK 15(10P11.21) MUTATED AMP PEAK 15(10P11.21) WILD-TYPE
  CLUS_1                            10                              32
  CLUS_2                            13                              39
  CLUS_3                            11                              21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(10P11.21) MUTATED       16      2     16
  AMP PEAK 15(10P11.21) WILD-TYPE     25     23     44
D15V2, multiclass
        clus
vv       AMP PEAK 15(10P11.21) MUTATED AMP PEAK 15(10P11.21) WILD-TYPE
  CLUS_1                            16                              25
  CLUS_2                             2                              23
  CLUS_3                            16                              44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(10P11.21) MUTATED        3      7      2      7
  AMP PEAK 15(10P11.21) WILD-TYPE     12     16      5     18
D15V3, multiclass
        clus
vv       AMP PEAK 15(10P11.21) MUTATED AMP PEAK 15(10P11.21) WILD-TYPE
  CLUS_1                             3                              12
  CLUS_2                             7                              16
  CLUS_3                             2                               5
  CLUS_4                             7                              18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(10P11.21) MUTATED        3      5      8      3
  AMP PEAK 15(10P11.21) WILD-TYPE     12     15     19      5
D15V4, multiclass
        clus
vv       AMP PEAK 15(10P11.21) MUTATED AMP PEAK 15(10P11.21) WILD-TYPE
  CLUS_1                             3                              12
  CLUS_2                             5                              15
  CLUS_3                             8                              19
  CLUS_4                             3                               5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(10P11.21) MUTATED       16     16      2
  AMP PEAK 15(10P11.21) WILD-TYPE     31     52      8
D15V5, multiclass
        clus
vv       AMP PEAK 15(10P11.21) MUTATED AMP PEAK 15(10P11.21) WILD-TYPE
  CLUS_1                            16                              31
  CLUS_2                            16                              52
  CLUS_3                             2                               8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(10P11.21) MUTATED       11      5     10      8
  AMP PEAK 15(10P11.21) WILD-TYPE     25     10     33     23
D15V6, multiclass
        clus
vv       AMP PEAK 15(10P11.21) MUTATED AMP PEAK 15(10P11.21) WILD-TYPE
  CLUS_1                            11                              25
  CLUS_2                             5                              10
  CLUS_3                            10                              33
  CLUS_4                             8                              23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(10P11.21) MUTATED       15     15      4
  AMP PEAK 15(10P11.21) WILD-TYPE     30     49     12
D15V7, multiclass
        clus
vv       AMP PEAK 15(10P11.21) MUTATED AMP PEAK 15(10P11.21) WILD-TYPE
  CLUS_1                            15                              30
  CLUS_2                            15                              49
  CLUS_3                             4                              12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(10P11.21) MUTATED       13      3     18
  AMP PEAK 15(10P11.21) WILD-TYPE     27      7     57
D15V8, multiclass
        clus
vv       AMP PEAK 15(10P11.21) MUTATED AMP PEAK 15(10P11.21) WILD-TYPE
  CLUS_1                            13                              27
  CLUS_2                             3                               7
  CLUS_3                            18                              57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(16) Variable = AMP PEAK 16(11P13) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(11P13) MUTATED       12     15     10
  AMP PEAK 16(11P13) WILD-TYPE     30     37     22
D16V1, multiclass
        clus
vv       AMP PEAK 16(11P13) MUTATED AMP PEAK 16(11P13) WILD-TYPE
  CLUS_1                         12                           30
  CLUS_2                         15                           37
  CLUS_3                         10                           22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(11P13) MUTATED       13      7     17
  AMP PEAK 16(11P13) WILD-TYPE     28     18     43
D16V2, multiclass
        clus
vv       AMP PEAK 16(11P13) MUTATED AMP PEAK 16(11P13) WILD-TYPE
  CLUS_1                         13                           28
  CLUS_2                          7                           18
  CLUS_3                         17                           43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(11P13) MUTATED        5      3      3      8
  AMP PEAK 16(11P13) WILD-TYPE     10     20      4     17
D16V3, multiclass
        clus
vv       AMP PEAK 16(11P13) MUTATED AMP PEAK 16(11P13) WILD-TYPE
  CLUS_1                          5                           10
  CLUS_2                          3                           20
  CLUS_3                          3                            4
  CLUS_4                          8                           17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(11P13) MUTATED        6      3      9      1
  AMP PEAK 16(11P13) WILD-TYPE      9     17     18      7
D16V4, multiclass
        clus
vv       AMP PEAK 16(11P13) MUTATED AMP PEAK 16(11P13) WILD-TYPE
  CLUS_1                          6                            9
  CLUS_2                          3                           17
  CLUS_3                          9                           18
  CLUS_4                          1                            7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(11P13) MUTATED       16     17      3
  AMP PEAK 16(11P13) WILD-TYPE     31     51      7
D16V5, multiclass
        clus
vv       AMP PEAK 16(11P13) MUTATED AMP PEAK 16(11P13) WILD-TYPE
  CLUS_1                         16                           31
  CLUS_2                         17                           51
  CLUS_3                          3                            7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(11P13) MUTATED       11      5     14      6
  AMP PEAK 16(11P13) WILD-TYPE     25     10     29     25
D16V6, multiclass
        clus
vv       AMP PEAK 16(11P13) MUTATED AMP PEAK 16(11P13) WILD-TYPE
  CLUS_1                         11                           25
  CLUS_2                          5                           10
  CLUS_3                         14                           29
  CLUS_4                          6                           25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(11P13) MUTATED       15     17      4
  AMP PEAK 16(11P13) WILD-TYPE     30     47     12
D16V7, multiclass
        clus
vv       AMP PEAK 16(11P13) MUTATED AMP PEAK 16(11P13) WILD-TYPE
  CLUS_1                         15                           30
  CLUS_2                         17                           47
  CLUS_3                          4                           12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(11P13) MUTATED       13      3     20
  AMP PEAK 16(11P13) WILD-TYPE     27      7     55
D16V8, multiclass
        clus
vv       AMP PEAK 16(11P13) MUTATED AMP PEAK 16(11P13) WILD-TYPE
  CLUS_1                         13                           27
  CLUS_2                          3                            7
  CLUS_3                         20                           55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(17) Variable = AMP PEAK 17(11Q13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(11Q13.3) MUTATED       19     43     13
  AMP PEAK 17(11Q13.3) WILD-TYPE     23      9     19
D17V1, multiclass
        clus
vv       AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE
  CLUS_1                           19                             23
  CLUS_2                           43                              9
  CLUS_3                           13                             19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(11Q13.3) MUTATED       17     17     41
  AMP PEAK 17(11Q13.3) WILD-TYPE     24      8     19
D17V2, multiclass
        clus
vv       AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE
  CLUS_1                           17                             24
  CLUS_2                           17                              8
  CLUS_3                           41                             19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(11Q13.3) MUTATED       10     15      6     11
  AMP PEAK 17(11Q13.3) WILD-TYPE      5      8      1     14
D17V3, multiclass
        clus
vv       AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE
  CLUS_1                           10                              5
  CLUS_2                           15                              8
  CLUS_3                            6                              1
  CLUS_4                           11                             14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(11Q13.3) MUTATED       12     12     12      6
  AMP PEAK 17(11Q13.3) WILD-TYPE      3      8     15      2
D17V4, multiclass
        clus
vv       AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE
  CLUS_1                           12                              3
  CLUS_2                           12                              8
  CLUS_3                           12                             15
  CLUS_4                            6                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(11Q13.3) MUTATED       22     49      3
  AMP PEAK 17(11Q13.3) WILD-TYPE     25     19      7
D17V5, multiclass
        clus
vv       AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE
  CLUS_1                           22                             25
  CLUS_2                           49                             19
  CLUS_3                            3                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(11Q13.3) MUTATED       17      5     32     20
  AMP PEAK 17(11Q13.3) WILD-TYPE     19     10     11     11
D17V6, multiclass
        clus
vv       AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE
  CLUS_1                           17                             19
  CLUS_2                            5                             10
  CLUS_3                           32                             11
  CLUS_4                           20                             11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(11Q13.3) MUTATED       21     45      8
  AMP PEAK 17(11Q13.3) WILD-TYPE     24     19      8
D17V7, multiclass
        clus
vv       AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE
  CLUS_1                           21                             24
  CLUS_2                           45                             19
  CLUS_3                            8                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(11Q13.3) MUTATED       19      3     52
  AMP PEAK 17(11Q13.3) WILD-TYPE     21      7     23
D17V8, multiclass
        clus
vv       AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE
  CLUS_1                           19                             21
  CLUS_2                            3                              7
  CLUS_3                           52                             23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(18) Variable = AMP PEAK 18(12P13.33) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(12P13.33) MUTATED        7     32     14
  AMP PEAK 18(12P13.33) WILD-TYPE     35     20     18
D18V1, multiclass
        clus
vv       AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE
  CLUS_1                             7                              35
  CLUS_2                            32                              20
  CLUS_3                            14                              18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(12P13.33) MUTATED       11      9     33
  AMP PEAK 18(12P13.33) WILD-TYPE     30     16     27
D18V2, multiclass
        clus
vv       AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE
  CLUS_1                            11                              30
  CLUS_2                             9                              16
  CLUS_3                            33                              27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(12P13.33) MUTATED        9     14      4      6
  AMP PEAK 18(12P13.33) WILD-TYPE      6      9      3     19
D18V3, multiclass
        clus
vv       AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE
  CLUS_1                             9                               6
  CLUS_2                            14                               9
  CLUS_3                             4                               3
  CLUS_4                             6                              19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(12P13.33) MUTATED        9     12      7      5
  AMP PEAK 18(12P13.33) WILD-TYPE      6      8     20      3
D18V4, multiclass
        clus
vv       AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE
  CLUS_1                             9                               6
  CLUS_2                            12                               8
  CLUS_3                             7                              20
  CLUS_4                             5                               3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(12P13.33) MUTATED       14     35      3
  AMP PEAK 18(12P13.33) WILD-TYPE     33     33      7
D18V5, multiclass
        clus
vv       AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE
  CLUS_1                            14                              33
  CLUS_2                            35                              33
  CLUS_3                             3                               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(12P13.33) MUTATED       10      4     25     13
  AMP PEAK 18(12P13.33) WILD-TYPE     26     11     18     18
D18V6, multiclass
        clus
vv       AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE
  CLUS_1                            10                              26
  CLUS_2                             4                              11
  CLUS_3                            25                              18
  CLUS_4                            13                              18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(12P13.33) MUTATED       13     33      6
  AMP PEAK 18(12P13.33) WILD-TYPE     32     31     10
D18V7, multiclass
        clus
vv       AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE
  CLUS_1                            13                              32
  CLUS_2                            33                              31
  CLUS_3                             6                              10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(12P13.33) MUTATED       12      2     38
  AMP PEAK 18(12P13.33) WILD-TYPE     28      8     37
D18V8, multiclass
        clus
vv       AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE
  CLUS_1                            12                              28
  CLUS_2                             2                               8
  CLUS_3                            38                              37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(19) Variable = AMP PEAK 19(12P12.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(12P12.1) MUTATED       10     33     16
  AMP PEAK 19(12P12.1) WILD-TYPE     32     19     16
D19V1, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           10                             32
  CLUS_2                           33                             19
  CLUS_3                           16                             16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(12P12.1) MUTATED       15     11     33
  AMP PEAK 19(12P12.1) WILD-TYPE     26     14     27
D19V2, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           15                             26
  CLUS_2                           11                             14
  CLUS_3                           33                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(12P12.1) MUTATED        9     15      4     10
  AMP PEAK 19(12P12.1) WILD-TYPE      6      8      3     15
D19V3, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                            9                              6
  CLUS_2                           15                              8
  CLUS_3                            4                              3
  CLUS_4                           10                             15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(12P12.1) MUTATED       11     12     10      5
  AMP PEAK 19(12P12.1) WILD-TYPE      4      8     17      3
D19V4, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           11                              4
  CLUS_2                           12                              8
  CLUS_3                           10                             17
  CLUS_4                            5                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(12P12.1) MUTATED       17     37      4
  AMP PEAK 19(12P12.1) WILD-TYPE     30     31      6
D19V5, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           17                             30
  CLUS_2                           37                             31
  CLUS_3                            4                              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(12P12.1) MUTATED       11      6     25     16
  AMP PEAK 19(12P12.1) WILD-TYPE     25      9     18     15
D19V6, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           11                             25
  CLUS_2                            6                              9
  CLUS_3                           25                             18
  CLUS_4                           16                             15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(12P12.1) MUTATED       16     35      7
  AMP PEAK 19(12P12.1) WILD-TYPE     29     29      9
D19V7, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           16                             29
  CLUS_2                           35                             29
  CLUS_3                            7                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(12P12.1) MUTATED       14      3     41
  AMP PEAK 19(12P12.1) WILD-TYPE     26      7     34
D19V8, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           14                             26
  CLUS_2                            3                              7
  CLUS_3                           41                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(20) Variable = AMP PEAK 20(13Q22.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(13Q22.1) MUTATED       15     12     14
  AMP PEAK 20(13Q22.1) WILD-TYPE     27     40     18
D20V1, multiclass
        clus
vv       AMP PEAK 20(13Q22.1) MUTATED AMP PEAK 20(13Q22.1) WILD-TYPE
  CLUS_1                           15                             27
  CLUS_2                           12                             40
  CLUS_3                           14                             18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(13Q22.1) MUTATED       18      7     16
  AMP PEAK 20(13Q22.1) WILD-TYPE     23     18     44
D20V2, multiclass
        clus
vv       AMP PEAK 20(13Q22.1) MUTATED AMP PEAK 20(13Q22.1) WILD-TYPE
  CLUS_1                           18                             23
  CLUS_2                            7                             18
  CLUS_3                           16                             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(13Q22.1) MUTATED        2      8      3     10
  AMP PEAK 20(13Q22.1) WILD-TYPE     13     15      4     15
D20V3, multiclass
        clus
vv       AMP PEAK 20(13Q22.1) MUTATED AMP PEAK 20(13Q22.1) WILD-TYPE
  CLUS_1                            2                             13
  CLUS_2                            8                             15
  CLUS_3                            3                              4
  CLUS_4                           10                             15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(13Q22.1) MUTATED        1      7     12      3
  AMP PEAK 20(13Q22.1) WILD-TYPE     14     13     15      5
D20V4, multiclass
        clus
vv       AMP PEAK 20(13Q22.1) MUTATED AMP PEAK 20(13Q22.1) WILD-TYPE
  CLUS_1                            1                             14
  CLUS_2                            7                             13
  CLUS_3                           12                             15
  CLUS_4                            3                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(13Q22.1) MUTATED       23     16      1
  AMP PEAK 20(13Q22.1) WILD-TYPE     24     52      9
D20V5, multiclass
        clus
vv       AMP PEAK 20(13Q22.1) MUTATED AMP PEAK 20(13Q22.1) WILD-TYPE
  CLUS_1                           23                             24
  CLUS_2                           16                             52
  CLUS_3                            1                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(13Q22.1) MUTATED       16      7      9      8
  AMP PEAK 20(13Q22.1) WILD-TYPE     20      8     34     23
D20V6, multiclass
        clus
vv       AMP PEAK 20(13Q22.1) MUTATED AMP PEAK 20(13Q22.1) WILD-TYPE
  CLUS_1                           16                             20
  CLUS_2                            7                              8
  CLUS_3                            9                             34
  CLUS_4                            8                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(13Q22.1) MUTATED       22     16      2
  AMP PEAK 20(13Q22.1) WILD-TYPE     23     48     14
D20V7, multiclass
        clus
vv       AMP PEAK 20(13Q22.1) MUTATED AMP PEAK 20(13Q22.1) WILD-TYPE
  CLUS_1                           22                             23
  CLUS_2                           16                             48
  CLUS_3                            2                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(13Q22.1) MUTATED       18      5     17
  AMP PEAK 20(13Q22.1) WILD-TYPE     22      5     58
D20V8, multiclass
        clus
vv       AMP PEAK 20(13Q22.1) MUTATED AMP PEAK 20(13Q22.1) WILD-TYPE
  CLUS_1                           18                             22
  CLUS_2                            5                              5
  CLUS_3                           17                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(21) Variable = AMP PEAK 21(15Q26.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       14     13     15
  AMP PEAK 21(15Q26.3) WILD-TYPE     28     39     17
D21V1, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           14                             28
  CLUS_2                           13                             39
  CLUS_3                           15                             17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       21      7     14
  AMP PEAK 21(15Q26.3) WILD-TYPE     20     18     46
D21V2, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           21                             20
  CLUS_2                            7                             18
  CLUS_3                           14                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(15Q26.3) MUTATED        4      4      3     10
  AMP PEAK 21(15Q26.3) WILD-TYPE     11     19      4     15
D21V3, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                            4                             11
  CLUS_2                            4                             19
  CLUS_3                            3                              4
  CLUS_4                           10                             15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(15Q26.3) MUTATED        3      4     12      2
  AMP PEAK 21(15Q26.3) WILD-TYPE     12     16     15      6
D21V4, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                            3                             12
  CLUS_2                            4                             16
  CLUS_3                           12                             15
  CLUS_4                            2                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       24     16      2
  AMP PEAK 21(15Q26.3) WILD-TYPE     23     52      8
D21V5, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           24                             23
  CLUS_2                           16                             52
  CLUS_3                            2                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(15Q26.3) MUTATED       19      5      9      9
  AMP PEAK 21(15Q26.3) WILD-TYPE     17     10     34     22
D21V6, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           19                             17
  CLUS_2                            5                             10
  CLUS_3                            9                             34
  CLUS_4                            9                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       23     14      5
  AMP PEAK 21(15Q26.3) WILD-TYPE     22     50     11
D21V7, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           23                             22
  CLUS_2                           14                             50
  CLUS_3                            5                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       22      2     18
  AMP PEAK 21(15Q26.3) WILD-TYPE     18      8     57
D21V8, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           22                             18
  CLUS_2                            2                              8
  CLUS_3                           18                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(22) Variable = AMP PEAK 22(17Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q12) MUTATED        9     18     19
  AMP PEAK 22(17Q12) WILD-TYPE     33     34     13
D22V1, multiclass
        clus
vv       AMP PEAK 22(17Q12) MUTATED AMP PEAK 22(17Q12) WILD-TYPE
  CLUS_1                          9                           33
  CLUS_2                         18                           34
  CLUS_3                         19                           13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q12) MUTATED       18      6     22
  AMP PEAK 22(17Q12) WILD-TYPE     23     19     38
D22V2, multiclass
        clus
vv       AMP PEAK 22(17Q12) MUTATED AMP PEAK 22(17Q12) WILD-TYPE
  CLUS_1                         18                           23
  CLUS_2                          6                           19
  CLUS_3                         22                           38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(17Q12) MUTATED        5      8      2     14
  AMP PEAK 22(17Q12) WILD-TYPE     10     15      5     11
D22V3, multiclass
        clus
vv       AMP PEAK 22(17Q12) MUTATED AMP PEAK 22(17Q12) WILD-TYPE
  CLUS_1                          5                           10
  CLUS_2                          8                           15
  CLUS_3                          2                            5
  CLUS_4                         14                           11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(17Q12) MUTATED        4      7     15      3
  AMP PEAK 22(17Q12) WILD-TYPE     11     13     12      5
D22V4, multiclass
        clus
vv       AMP PEAK 22(17Q12) MUTATED AMP PEAK 22(17Q12) WILD-TYPE
  CLUS_1                          4                           11
  CLUS_2                          7                           13
  CLUS_3                         15                           12
  CLUS_4                          3                            5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q12) MUTATED       23     21      1
  AMP PEAK 22(17Q12) WILD-TYPE     24     47      9
D22V5, multiclass
        clus
vv       AMP PEAK 22(17Q12) MUTATED AMP PEAK 22(17Q12) WILD-TYPE
  CLUS_1                         23                           24
  CLUS_2                         21                           47
  CLUS_3                          1                            9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(17Q12) MUTATED       16      7     12     10
  AMP PEAK 22(17Q12) WILD-TYPE     20      8     31     21
D22V6, multiclass
        clus
vv       AMP PEAK 22(17Q12) MUTATED AMP PEAK 22(17Q12) WILD-TYPE
  CLUS_1                         16                           20
  CLUS_2                          7                            8
  CLUS_3                         12                           31
  CLUS_4                         10                           21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q12) MUTATED       21     21      3
  AMP PEAK 22(17Q12) WILD-TYPE     24     43     13
D22V7, multiclass
        clus
vv       AMP PEAK 22(17Q12) MUTATED AMP PEAK 22(17Q12) WILD-TYPE
  CLUS_1                         21                           24
  CLUS_2                         21                           43
  CLUS_3                          3                           13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q12) MUTATED       19      4     22
  AMP PEAK 22(17Q12) WILD-TYPE     21      6     53
D22V8, multiclass
        clus
vv       AMP PEAK 22(17Q12) MUTATED AMP PEAK 22(17Q12) WILD-TYPE
  CLUS_1                         19                           21
  CLUS_2                          4                            6
  CLUS_3                         22                           53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(23) Variable = AMP PEAK 23(18P11.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED        8     20     17
  AMP PEAK 23(18P11.32) WILD-TYPE     34     32     15
D23V1, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                             8                              34
  CLUS_2                            20                              32
  CLUS_3                            17                              15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       11     11     23
  AMP PEAK 23(18P11.32) WILD-TYPE     30     14     37
D23V2, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            11                              30
  CLUS_2                            11                              14
  CLUS_3                            23                              37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(18P11.32) MUTATED        6     11      2      9
  AMP PEAK 23(18P11.32) WILD-TYPE      9     12      5     16
D23V3, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                             6                               9
  CLUS_2                            11                              12
  CLUS_3                             2                               5
  CLUS_4                             9                              16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(18P11.32) MUTATED        7      9      9      3
  AMP PEAK 23(18P11.32) WILD-TYPE      8     11     18      5
D23V4, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                             7                               8
  CLUS_2                             9                              11
  CLUS_3                             9                              18
  CLUS_4                             3                               5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       15     28      1
  AMP PEAK 23(18P11.32) WILD-TYPE     32     40      9
D23V5, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            15                              32
  CLUS_2                            28                              40
  CLUS_3                             1                               9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(18P11.32) MUTATED       10      5     16     13
  AMP PEAK 23(18P11.32) WILD-TYPE     26     10     27     18
D23V6, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            10                              26
  CLUS_2                             5                              10
  CLUS_3                            16                              27
  CLUS_4                            13                              18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       14     26      4
  AMP PEAK 23(18P11.32) WILD-TYPE     31     38     12
D23V7, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            14                              31
  CLUS_2                            26                              38
  CLUS_3                             4                              12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       13      2     29
  AMP PEAK 23(18P11.32) WILD-TYPE     27      8     46
D23V8, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            13                              27
  CLUS_2                             2                               8
  CLUS_3                            29                              46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(24) Variable = AMP PEAK 24(18Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       11      9     13
  AMP PEAK 24(18Q11.2) WILD-TYPE     31     43     19
D24V1, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           11                             31
  CLUS_2                            9                             43
  CLUS_3                           13                             19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       17      7      9
  AMP PEAK 24(18Q11.2) WILD-TYPE     24     18     51
D24V2, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           17                             24
  CLUS_2                            7                             18
  CLUS_3                            9                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(18Q11.2) MUTATED        4      5      3     11
  AMP PEAK 24(18Q11.2) WILD-TYPE     11     18      4     14
D24V3, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                            4                             11
  CLUS_2                            5                             18
  CLUS_3                            3                              4
  CLUS_4                           11                             14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(18Q11.2) MUTATED        7      4     12      0
  AMP PEAK 24(18Q11.2) WILD-TYPE      8     16     15      8
D24V4, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                            7                              8
  CLUS_2                            4                             16
  CLUS_3                           12                             15
  CLUS_4                            0                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       20     12      1
  AMP PEAK 24(18Q11.2) WILD-TYPE     27     56      9
D24V5, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           20                             27
  CLUS_2                           12                             56
  CLUS_3                            1                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(18Q11.2) MUTATED       14      7     10      2
  AMP PEAK 24(18Q11.2) WILD-TYPE     22      8     33     29
D24V6, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           14                             22
  CLUS_2                            7                              8
  CLUS_3                           10                             33
  CLUS_4                            2                             29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       18     12      3
  AMP PEAK 24(18Q11.2) WILD-TYPE     27     52     13
D24V7, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           18                             27
  CLUS_2                           12                             52
  CLUS_3                            3                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       15      6     12
  AMP PEAK 24(18Q11.2) WILD-TYPE     25      4     63
D24V8, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           15                             25
  CLUS_2                            6                              4
  CLUS_3                           12                             63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(25) Variable = AMP PEAK 25(19P13.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19P13.2) MUTATED        3     13      6
  AMP PEAK 25(19P13.2) WILD-TYPE     39     39     26
D25V1, multiclass
        clus
vv       AMP PEAK 25(19P13.2) MUTATED AMP PEAK 25(19P13.2) WILD-TYPE
  CLUS_1                            3                             39
  CLUS_2                           13                             39
  CLUS_3                            6                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19P13.2) MUTATED        6      2     14
  AMP PEAK 25(19P13.2) WILD-TYPE     35     23     46
D25V2, multiclass
        clus
vv       AMP PEAK 25(19P13.2) MUTATED AMP PEAK 25(19P13.2) WILD-TYPE
  CLUS_1                            6                             35
  CLUS_2                            2                             23
  CLUS_3                           14                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(19P13.2) MUTATED        2      8      1      3
  AMP PEAK 25(19P13.2) WILD-TYPE     13     15      6     22
D25V3, multiclass
        clus
vv       AMP PEAK 25(19P13.2) MUTATED AMP PEAK 25(19P13.2) WILD-TYPE
  CLUS_1                            2                             13
  CLUS_2                            8                             15
  CLUS_3                            1                              6
  CLUS_4                            3                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(19P13.2) MUTATED        3      6      3      2
  AMP PEAK 25(19P13.2) WILD-TYPE     12     14     24      6
D25V4, multiclass
        clus
vv       AMP PEAK 25(19P13.2) MUTATED AMP PEAK 25(19P13.2) WILD-TYPE
  CLUS_1                            3                             12
  CLUS_2                            6                             14
  CLUS_3                            3                             24
  CLUS_4                            2                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19P13.2) MUTATED        6     15      0
  AMP PEAK 25(19P13.2) WILD-TYPE     41     53     10
D25V5, multiclass
        clus
vv       AMP PEAK 25(19P13.2) MUTATED AMP PEAK 25(19P13.2) WILD-TYPE
  CLUS_1                            6                             41
  CLUS_2                           15                             53
  CLUS_3                            0                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(19P13.2) MUTATED        4      2      7      8
  AMP PEAK 25(19P13.2) WILD-TYPE     32     13     36     23
D25V6, multiclass
        clus
vv       AMP PEAK 25(19P13.2) MUTATED AMP PEAK 25(19P13.2) WILD-TYPE
  CLUS_1                            4                             32
  CLUS_2                            2                             13
  CLUS_3                            7                             36
  CLUS_4                            8                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19P13.2) MUTATED        6     15      0
  AMP PEAK 25(19P13.2) WILD-TYPE     39     49     16
D25V7, multiclass
        clus
vv       AMP PEAK 25(19P13.2) MUTATED AMP PEAK 25(19P13.2) WILD-TYPE
  CLUS_1                            6                             39
  CLUS_2                           15                             49
  CLUS_3                            0                             16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19P13.2) MUTATED        5      1     15
  AMP PEAK 25(19P13.2) WILD-TYPE     35      9     60
D25V8, multiclass
        clus
vv       AMP PEAK 25(19P13.2) MUTATED AMP PEAK 25(19P13.2) WILD-TYPE
  CLUS_1                            5                             35
  CLUS_2                            1                              9
  CLUS_3                           15                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(26) Variable = AMP PEAK 26(19Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q12) MUTATED        8      9     15
  AMP PEAK 26(19Q12) WILD-TYPE     34     43     17
D26V1, multiclass
        clus
vv       AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE
  CLUS_1                          8                           34
  CLUS_2                          9                           43
  CLUS_3                         15                           17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q12) MUTATED       14      7     11
  AMP PEAK 26(19Q12) WILD-TYPE     27     18     49
D26V2, multiclass
        clus
vv       AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE
  CLUS_1                         14                           27
  CLUS_2                          7                           18
  CLUS_3                         11                           49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(19Q12) MUTATED        5      5      2     11
  AMP PEAK 26(19Q12) WILD-TYPE     10     18      5     14
D26V3, multiclass
        clus
vv       AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE
  CLUS_1                          5                           10
  CLUS_2                          5                           18
  CLUS_3                          2                            5
  CLUS_4                         11                           14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(19Q12) MUTATED        4      4     12      3
  AMP PEAK 26(19Q12) WILD-TYPE     11     16     15      5
D26V4, multiclass
        clus
vv       AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE
  CLUS_1                          4                           11
  CLUS_2                          4                           16
  CLUS_3                         12                           15
  CLUS_4                          3                            5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q12) MUTATED       18     13      1
  AMP PEAK 26(19Q12) WILD-TYPE     29     55      9
D26V5, multiclass
        clus
vv       AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE
  CLUS_1                         18                           29
  CLUS_2                         13                           55
  CLUS_3                          1                            9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(19Q12) MUTATED       15      3      9      5
  AMP PEAK 26(19Q12) WILD-TYPE     21     12     34     26
D26V6, multiclass
        clus
vv       AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE
  CLUS_1                         15                           21
  CLUS_2                          3                           12
  CLUS_3                          9                           34
  CLUS_4                          5                           26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q12) MUTATED       17     12      3
  AMP PEAK 26(19Q12) WILD-TYPE     28     52     13
D26V7, multiclass
        clus
vv       AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE
  CLUS_1                         17                           28
  CLUS_2                         12                           52
  CLUS_3                          3                           13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q12) MUTATED       16      2     14
  AMP PEAK 26(19Q12) WILD-TYPE     24      8     61
D26V8, multiclass
        clus
vv       AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE
  CLUS_1                         16                           24
  CLUS_2                          2                            8
  CLUS_3                         14                           61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(27) Variable = DEL PEAK  1(1P36.13) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.13) MUTATED        9     19     15
  DEL PEAK  1(1P36.13) WILD-TYPE     33     33     17
D27V1, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                            9                             33
  CLUS_2                           19                             33
  CLUS_3                           15                             17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.13) MUTATED       19      4     20
  DEL PEAK  1(1P36.13) WILD-TYPE     22     21     40
D27V2, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           19                             22
  CLUS_2                            4                             21
  CLUS_3                           20                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.13) MUTATED        4      7      1     14
  DEL PEAK  1(1P36.13) WILD-TYPE     11     16      6     11
D27V3, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                            4                             11
  CLUS_2                            7                             16
  CLUS_3                            1                              6
  CLUS_4                           14                             11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.13) MUTATED        5      7     14      0
  DEL PEAK  1(1P36.13) WILD-TYPE     10     13     13      8
D27V4, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                            5                             10
  CLUS_2                            7                             13
  CLUS_3                           14                             13
  CLUS_4                            0                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.13) MUTATED       21     21      1
  DEL PEAK  1(1P36.13) WILD-TYPE     26     47      9
D27V5, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           21                             26
  CLUS_2                           21                             47
  CLUS_3                            1                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.13) MUTATED       15      6     17      5
  DEL PEAK  1(1P36.13) WILD-TYPE     21      9     26     26
D27V6, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           15                             21
  CLUS_2                            6                              9
  CLUS_3                           17                             26
  CLUS_4                            5                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.13) MUTATED       21     21      1
  DEL PEAK  1(1P36.13) WILD-TYPE     24     43     15
D27V7, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           21                             24
  CLUS_2                           21                             43
  CLUS_3                            1                             15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.13) MUTATED       18      3     22
  DEL PEAK  1(1P36.13) WILD-TYPE     22      7     53
D27V8, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           18                             22
  CLUS_2                            3                              7
  CLUS_3                           22                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(28) Variable = DEL PEAK  2(1P13.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED        7     23     14
  DEL PEAK  2(1P13.2) WILD-TYPE     35     29     18
D28V1, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                           7                            35
  CLUS_2                          23                            29
  CLUS_3                          14                            18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       14      6     24
  DEL PEAK  2(1P13.2) WILD-TYPE     27     19     36
D28V2, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          14                            27
  CLUS_2                           6                            19
  CLUS_3                          24                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.2) MUTATED        3     10      1     11
  DEL PEAK  2(1P13.2) WILD-TYPE     12     13      6     14
D28V3, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                           3                            12
  CLUS_2                          10                            13
  CLUS_3                           1                             6
  CLUS_4                          11                            14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.2) MUTATED        4      9     11      1
  DEL PEAK  2(1P13.2) WILD-TYPE     11     11     16      7
D28V4, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                           4                            11
  CLUS_2                           9                            11
  CLUS_3                          11                            16
  CLUS_4                           1                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       16     25      3
  DEL PEAK  2(1P13.2) WILD-TYPE     31     43      7
D28V5, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          16                            31
  CLUS_2                          25                            43
  CLUS_3                           3                             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.2) MUTATED       11      5     21      7
  DEL PEAK  2(1P13.2) WILD-TYPE     25     10     22     24
D28V6, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          11                            25
  CLUS_2                           5                            10
  CLUS_3                          21                            22
  CLUS_4                           7                            24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       16     24      4
  DEL PEAK  2(1P13.2) WILD-TYPE     29     40     12
D28V7, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          16                            29
  CLUS_2                          24                            40
  CLUS_3                           4                            12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       13      3     28
  DEL PEAK  2(1P13.2) WILD-TYPE     27      7     47
D28V8, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          13                            27
  CLUS_2                           3                             7
  CLUS_3                          28                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(29) Variable = DEL PEAK  3(1Q44) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED        4      6      5
  DEL PEAK  3(1Q44) WILD-TYPE     38     46     27
D29V1, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         4                          38
  CLUS_2                         6                          46
  CLUS_3                         5                          27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED        5      4      6
  DEL PEAK  3(1Q44) WILD-TYPE     36     21     54
D29V2, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         5                          36
  CLUS_2                         4                          21
  CLUS_3                         6                          54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(1Q44) MUTATED        3      1      0      5
  DEL PEAK  3(1Q44) WILD-TYPE     12     22      7     20
D29V3, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         3                          12
  CLUS_2                         1                          22
  CLUS_3                         0                           7
  CLUS_4                         5                          20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(1Q44) MUTATED        1      1      5      2
  DEL PEAK  3(1Q44) WILD-TYPE     14     19     22      6
D29V4, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         1                          14
  CLUS_2                         1                          19
  CLUS_3                         5                          22
  CLUS_4                         2                           6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED        7      7      1
  DEL PEAK  3(1Q44) WILD-TYPE     40     61      9
D29V5, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         7                          40
  CLUS_2                         7                          61
  CLUS_3                         1                           9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(1Q44) MUTATED        5      3      4      3
  DEL PEAK  3(1Q44) WILD-TYPE     31     12     39     28
D29V6, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         5                          31
  CLUS_2                         3                          12
  CLUS_3                         4                          39
  CLUS_4                         3                          28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED        6      6      3
  DEL PEAK  3(1Q44) WILD-TYPE     39     58     13
D29V7, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         6                          39
  CLUS_2                         6                          58
  CLUS_3                         3                          13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED        6      2      7
  DEL PEAK  3(1Q44) WILD-TYPE     34      8     68
D29V8, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         6                          34
  CLUS_2                         2                           8
  CLUS_3                         7                          68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(30) Variable = DEL PEAK  4(2Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       12     27      7
  DEL PEAK  4(2Q22.1) WILD-TYPE     30     25     25
D30V1, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          12                            30
  CLUS_2                          27                            25
  CLUS_3                           7                            25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED        7      6     33
  DEL PEAK  4(2Q22.1) WILD-TYPE     34     19     27
D30V2, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                           7                            34
  CLUS_2                           6                            19
  CLUS_3                          33                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED        5      6      3      4
  DEL PEAK  4(2Q22.1) WILD-TYPE     10     17      4     21
D30V3, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                           5                            10
  CLUS_2                           6                            17
  CLUS_3                           3                             4
  CLUS_4                           4                            21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED        6      6      4      2
  DEL PEAK  4(2Q22.1) WILD-TYPE      9     14     23      6
D30V4, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                           6                             9
  CLUS_2                           6                            14
  CLUS_3                           4                            23
  CLUS_4                           2                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED        9     35      2
  DEL PEAK  4(2Q22.1) WILD-TYPE     38     33      8
D30V5, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                           9                            38
  CLUS_2                          35                            33
  CLUS_3                           2                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED        7      2     19     18
  DEL PEAK  4(2Q22.1) WILD-TYPE     29     13     24     13
D30V6, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                           7                            29
  CLUS_2                           2                            13
  CLUS_3                          19                            24
  CLUS_4                          18                            13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED        9     35      2
  DEL PEAK  4(2Q22.1) WILD-TYPE     36     29     14
D30V7, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                           9                            36
  CLUS_2                          35                            29
  CLUS_3                           2                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED        8      1     37
  DEL PEAK  4(2Q22.1) WILD-TYPE     32      9     38
D30V8, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                           8                            32
  CLUS_2                           1                             9
  CLUS_3                          37                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(31) Variable = DEL PEAK  5(2Q33.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q33.3) MUTATED        7     11      7
  DEL PEAK  5(2Q33.3) WILD-TYPE     35     41     25
D31V1, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           7                            35
  CLUS_2                          11                            41
  CLUS_3                           7                            25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q33.3) MUTATED        4      5     16
  DEL PEAK  5(2Q33.3) WILD-TYPE     37     20     44
D31V2, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           4                            37
  CLUS_2                           5                            20
  CLUS_3                          16                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q33.3) MUTATED        3      3      3      3
  DEL PEAK  5(2Q33.3) WILD-TYPE     12     20      4     22
D31V3, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           3                            12
  CLUS_2                           3                            20
  CLUS_3                           3                             4
  CLUS_4                           3                            22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q33.3) MUTATED        5      3      3      1
  DEL PEAK  5(2Q33.3) WILD-TYPE     10     17     24      7
D31V4, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           5                            10
  CLUS_2                           3                            17
  CLUS_3                           3                            24
  CLUS_4                           1                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q33.3) MUTATED        5     16      3
  DEL PEAK  5(2Q33.3) WILD-TYPE     42     52      7
D31V5, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           5                            42
  CLUS_2                          16                            52
  CLUS_3                           3                             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q33.3) MUTATED        2      3     12      7
  DEL PEAK  5(2Q33.3) WILD-TYPE     34     12     31     24
D31V6, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           2                            34
  CLUS_2                           3                            12
  CLUS_3                          12                            31
  CLUS_4                           7                            24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q33.3) MUTATED        5     16      3
  DEL PEAK  5(2Q33.3) WILD-TYPE     40     48     13
D31V7, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           5                            40
  CLUS_2                          16                            48
  CLUS_3                           3                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q33.3) MUTATED        3      2     19
  DEL PEAK  5(2Q33.3) WILD-TYPE     37      8     56
D31V8, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           3                            37
  CLUS_2                           2                             8
  CLUS_3                          19                            56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(32) Variable = DEL PEAK  6(3P25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED       19     44     14
  DEL PEAK  6(3P25.3) WILD-TYPE     23      8     18
D32V1, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          19                            23
  CLUS_2                          44                             8
  CLUS_3                          14                            18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED       15     13     49
  DEL PEAK  6(3P25.3) WILD-TYPE     26     12     11
D32V2, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          15                            26
  CLUS_2                          13                            12
  CLUS_3                          49                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P25.3) MUTATED       11     19      4     12
  DEL PEAK  6(3P25.3) WILD-TYPE      4      4      3     13
D32V3, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          11                             4
  CLUS_2                          19                             4
  CLUS_3                           4                             3
  CLUS_4                          12                            13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P25.3) MUTATED       12     17     12      5
  DEL PEAK  6(3P25.3) WILD-TYPE      3      3     15      3
D32V4, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          12                             3
  CLUS_2                          17                             3
  CLUS_3                          12                            15
  CLUS_4                           5                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED       19     54      4
  DEL PEAK  6(3P25.3) WILD-TYPE     28     14      6
D32V5, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          19                            28
  CLUS_2                          54                            14
  CLUS_3                           4                             6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P25.3) MUTATED       14      5     34     24
  DEL PEAK  6(3P25.3) WILD-TYPE     22     10      9      7
D32V6, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          14                            22
  CLUS_2                           5                            10
  CLUS_3                          34                             9
  CLUS_4                          24                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED       18     52      7
  DEL PEAK  6(3P25.3) WILD-TYPE     27     12      9
D32V7, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          18                            27
  CLUS_2                          52                            12
  CLUS_3                           7                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED       15      4     58
  DEL PEAK  6(3P25.3) WILD-TYPE     25      6     17
D32V8, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          15                            25
  CLUS_2                           4                             6
  CLUS_3                          58                            17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(33) Variable = DEL PEAK  7(3P14.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P14.3) MUTATED       22     50     17
  DEL PEAK  7(3P14.3) WILD-TYPE     20      2     15
D33V1, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          22                            20
  CLUS_2                          50                             2
  CLUS_3                          17                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P14.3) MUTATED       19     18     52
  DEL PEAK  7(3P14.3) WILD-TYPE     22      7      8
D33V2, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          19                            22
  CLUS_2                          18                             7
  CLUS_3                          52                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P14.3) MUTATED       12     22      5     15
  DEL PEAK  7(3P14.3) WILD-TYPE      3      1      2     10
D33V3, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          12                             3
  CLUS_2                          22                             1
  CLUS_3                           5                             2
  CLUS_4                          15                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P14.3) MUTATED       14     19     15      6
  DEL PEAK  7(3P14.3) WILD-TYPE      1      1     12      2
D33V4, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          14                             1
  CLUS_2                          19                             1
  CLUS_3                          15                            12
  CLUS_4                           6                             2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P14.3) MUTATED       23     60      6
  DEL PEAK  7(3P14.3) WILD-TYPE     24      8      4
D33V5, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          23                            24
  CLUS_2                          60                             8
  CLUS_3                           6                             4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P14.3) MUTATED       18      6     39     26
  DEL PEAK  7(3P14.3) WILD-TYPE     18      9      4      5
D33V6, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          18                            18
  CLUS_2                           6                             9
  CLUS_3                          39                             4
  CLUS_4                          26                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P14.3) MUTATED       22     57     10
  DEL PEAK  7(3P14.3) WILD-TYPE     23      7      6
D33V7, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          22                            23
  CLUS_2                          57                             7
  CLUS_3                          10                             6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P14.3) MUTATED       19      5     65
  DEL PEAK  7(3P14.3) WILD-TYPE     21      5     10
D33V8, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          19                            21
  CLUS_2                           5                             5
  CLUS_3                          65                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(34) Variable = DEL PEAK  8(3P14.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P14.2) MUTATED       21     49     19
  DEL PEAK  8(3P14.2) WILD-TYPE     21      3     13
D34V1, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          21                            21
  CLUS_2                          49                             3
  CLUS_3                          19                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P14.2) MUTATED       21     17     51
  DEL PEAK  8(3P14.2) WILD-TYPE     20      8      9
D34V2, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          21                            20
  CLUS_2                          17                             8
  CLUS_3                          51                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P14.2) MUTATED       12     21      5     18
  DEL PEAK  8(3P14.2) WILD-TYPE      3      2      2      7
D34V3, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          12                             3
  CLUS_2                          21                             2
  CLUS_3                           5                             2
  CLUS_4                          18                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P14.2) MUTATED       14     18     18      6
  DEL PEAK  8(3P14.2) WILD-TYPE      1      2      9      2
D34V4, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          14                             1
  CLUS_2                          18                             2
  CLUS_3                          18                             9
  CLUS_4                           6                             2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P14.2) MUTATED       25     59      5
  DEL PEAK  8(3P14.2) WILD-TYPE     22      9      5
D34V5, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          25                            22
  CLUS_2                          59                             9
  CLUS_3                           5                             5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P14.2) MUTATED       19      6     38     26
  DEL PEAK  8(3P14.2) WILD-TYPE     17      9      5      5
D34V6, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          19                            17
  CLUS_2                           6                             9
  CLUS_3                          38                             5
  CLUS_4                          26                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P14.2) MUTATED       24     56      9
  DEL PEAK  8(3P14.2) WILD-TYPE     21      8      7
D34V7, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          24                            21
  CLUS_2                          56                             8
  CLUS_3                           9                             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P14.2) MUTATED       21      4     64
  DEL PEAK  8(3P14.2) WILD-TYPE     19      6     11
D34V8, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          21                            19
  CLUS_2                           4                             6
  CLUS_3                          64                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(35) Variable = DEL PEAK  9(3Q11.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED        6      7      5
  DEL PEAK  9(3Q11.1) WILD-TYPE     36     45     27
D35V1, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           6                            36
  CLUS_2                           7                            45
  CLUS_3                           5                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED        6      3      9
  DEL PEAK  9(3Q11.1) WILD-TYPE     35     22     51
D35V2, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           6                            35
  CLUS_2                           3                            22
  CLUS_3                           9                            51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3Q11.1) MUTATED        4      2      1      3
  DEL PEAK  9(3Q11.1) WILD-TYPE     11     21      6     22
D35V3, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           4                            11
  CLUS_2                           2                            21
  CLUS_3                           1                             6
  CLUS_4                           3                            22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3Q11.1) MUTATED        3      1      3      3
  DEL PEAK  9(3Q11.1) WILD-TYPE     12     19     24      5
D35V4, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           3                            12
  CLUS_2                           1                            19
  CLUS_3                           3                            24
  CLUS_4                           3                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED        6     11      1
  DEL PEAK  9(3Q11.1) WILD-TYPE     41     57      9
D35V5, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           6                            41
  CLUS_2                          11                            57
  CLUS_3                           1                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3Q11.1) MUTATED        5      1      7      5
  DEL PEAK  9(3Q11.1) WILD-TYPE     31     14     36     26
D35V6, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           5                            31
  CLUS_2                           1                            14
  CLUS_3                           7                            36
  CLUS_4                           5                            26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED        6     11      1
  DEL PEAK  9(3Q11.1) WILD-TYPE     39     53     15
D35V7, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           6                            39
  CLUS_2                          11                            53
  CLUS_3                           1                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED        5      1     12
  DEL PEAK  9(3Q11.1) WILD-TYPE     35      9     63
D35V8, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           5                            35
  CLUS_2                           1                             9
  CLUS_3                          12                            63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(36) Variable = DEL PEAK 10(3Q26.31) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q26.31) MUTATED        3      2      6
  DEL PEAK 10(3Q26.31) WILD-TYPE     39     50     26
D36V1, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                            3                             39
  CLUS_2                            2                             50
  CLUS_3                            6                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q26.31) MUTATED        8      1      2
  DEL PEAK 10(3Q26.31) WILD-TYPE     33     24     58
D36V2, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                            8                             33
  CLUS_2                            1                             24
  CLUS_3                            2                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(3Q26.31) MUTATED        0      1      0      6
  DEL PEAK 10(3Q26.31) WILD-TYPE     15     22      7     19
D36V3, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                            0                             15
  CLUS_2                            1                             22
  CLUS_3                            0                              7
  CLUS_4                            6                             19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(3Q26.31) MUTATED        0      1      6      0
  DEL PEAK 10(3Q26.31) WILD-TYPE     15     19     21      8
D36V4, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                            0                             15
  CLUS_2                            1                             19
  CLUS_3                            6                             21
  CLUS_4                            0                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q26.31) MUTATED        9      2      0
  DEL PEAK 10(3Q26.31) WILD-TYPE     38     66     10
D36V5, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                            9                             38
  CLUS_2                            2                             66
  CLUS_3                            0                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(3Q26.31) MUTATED        8      1      1      1
  DEL PEAK 10(3Q26.31) WILD-TYPE     28     14     42     30
D36V6, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                            8                             28
  CLUS_2                            1                             14
  CLUS_3                            1                             42
  CLUS_4                            1                             30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q26.31) MUTATED        9      2      0
  DEL PEAK 10(3Q26.31) WILD-TYPE     36     62     16
D36V7, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                            9                             36
  CLUS_2                            2                             62
  CLUS_3                            0                             16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q26.31) MUTATED        9      0      2
  DEL PEAK 10(3Q26.31) WILD-TYPE     31     10     73
D36V8, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                            9                             31
  CLUS_2                            0                             10
  CLUS_3                            2                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(37) Variable = DEL PEAK 11(4P15.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       15     34     19
  DEL PEAK 11(4P15.2) WILD-TYPE     27     18     13
D37V1, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          15                            27
  CLUS_2                          34                            18
  CLUS_3                          19                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       22     10     36
  DEL PEAK 11(4P15.2) WILD-TYPE     19     15     24
D37V2, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          22                            19
  CLUS_2                          10                            15
  CLUS_3                          36                            24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4P15.2) MUTATED        8     17      2     14
  DEL PEAK 11(4P15.2) WILD-TYPE      7      6      5     11
D37V3, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                           8                             7
  CLUS_2                          17                             6
  CLUS_3                           2                             5
  CLUS_4                          14                            11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4P15.2) MUTATED        8     15     14      4
  DEL PEAK 11(4P15.2) WILD-TYPE      7      5     13      4
D37V4, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                           8                             7
  CLUS_2                          15                             5
  CLUS_3                          14                            13
  CLUS_4                           4                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       25     42      1
  DEL PEAK 11(4P15.2) WILD-TYPE     22     26      9
D37V5, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          25                            22
  CLUS_2                          42                            26
  CLUS_3                           1                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4P15.2) MUTATED       19      6     26     17
  DEL PEAK 11(4P15.2) WILD-TYPE     17      9     17     14
D37V6, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          19                            17
  CLUS_2                           6                             9
  CLUS_3                          26                            17
  CLUS_4                          17                            14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       24     41      3
  DEL PEAK 11(4P15.2) WILD-TYPE     21     23     13
D37V7, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          24                            21
  CLUS_2                          41                            23
  CLUS_3                           3                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       23      2     43
  DEL PEAK 11(4P15.2) WILD-TYPE     17      8     32
D37V8, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          23                            17
  CLUS_2                           2                             8
  CLUS_3                          43                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(38) Variable = DEL PEAK 12(4Q21.23) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q21.23) MUTATED       14     23     23
  DEL PEAK 12(4Q21.23) WILD-TYPE     28     29      9
D38V1, multiclass
        clus
vv       DEL PEAK 12(4Q21.23) MUTATED DEL PEAK 12(4Q21.23) WILD-TYPE
  CLUS_1                           14                             28
  CLUS_2                           23                             29
  CLUS_3                           23                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q21.23) MUTATED       24      9     27
  DEL PEAK 12(4Q21.23) WILD-TYPE     17     16     33
D38V2, multiclass
        clus
vv       DEL PEAK 12(4Q21.23) MUTATED DEL PEAK 12(4Q21.23) WILD-TYPE
  CLUS_1                           24                             17
  CLUS_2                            9                             16
  CLUS_3                           27                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q21.23) MUTATED        6     16      1     14
  DEL PEAK 12(4Q21.23) WILD-TYPE      9      7      6     11
D38V3, multiclass
        clus
vv       DEL PEAK 12(4Q21.23) MUTATED DEL PEAK 12(4Q21.23) WILD-TYPE
  CLUS_1                            6                              9
  CLUS_2                           16                              7
  CLUS_3                            1                              6
  CLUS_4                           14                             11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q21.23) MUTATED        6     13     14      4
  DEL PEAK 12(4Q21.23) WILD-TYPE      9      7     13      4
D38V4, multiclass
        clus
vv       DEL PEAK 12(4Q21.23) MUTATED DEL PEAK 12(4Q21.23) WILD-TYPE
  CLUS_1                            6                              9
  CLUS_2                           13                              7
  CLUS_3                           14                             13
  CLUS_4                            4                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q21.23) MUTATED       27     31      2
  DEL PEAK 12(4Q21.23) WILD-TYPE     20     37      8
D38V5, multiclass
        clus
vv       DEL PEAK 12(4Q21.23) MUTATED DEL PEAK 12(4Q21.23) WILD-TYPE
  CLUS_1                           27                             20
  CLUS_2                           31                             37
  CLUS_3                            2                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q21.23) MUTATED       21      7     18     14
  DEL PEAK 12(4Q21.23) WILD-TYPE     15      8     25     17
D38V6, multiclass
        clus
vv       DEL PEAK 12(4Q21.23) MUTATED DEL PEAK 12(4Q21.23) WILD-TYPE
  CLUS_1                           21                             15
  CLUS_2                            7                              8
  CLUS_3                           18                             25
  CLUS_4                           14                             17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q21.23) MUTATED       27     30      3
  DEL PEAK 12(4Q21.23) WILD-TYPE     18     34     13
D38V7, multiclass
        clus
vv       DEL PEAK 12(4Q21.23) MUTATED DEL PEAK 12(4Q21.23) WILD-TYPE
  CLUS_1                           27                             18
  CLUS_2                           30                             34
  CLUS_3                            3                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q21.23) MUTATED       25      3     32
  DEL PEAK 12(4Q21.23) WILD-TYPE     15      7     43
D38V8, multiclass
        clus
vv       DEL PEAK 12(4Q21.23) MUTATED DEL PEAK 12(4Q21.23) WILD-TYPE
  CLUS_1                           25                             15
  CLUS_2                            3                              7
  CLUS_3                           32                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(39) Variable = DEL PEAK 13(4Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q22.1) MUTATED       15     28     24
  DEL PEAK 13(4Q22.1) WILD-TYPE     27     24      8
D39V1, multiclass
        clus
vv       DEL PEAK 13(4Q22.1) MUTATED DEL PEAK 13(4Q22.1) WILD-TYPE
  CLUS_1                          15                            27
  CLUS_2                          28                            24
  CLUS_3                          24                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q22.1) MUTATED       24     11     32
  DEL PEAK 13(4Q22.1) WILD-TYPE     17     14     28
D39V2, multiclass
        clus
vv       DEL PEAK 13(4Q22.1) MUTATED DEL PEAK 13(4Q22.1) WILD-TYPE
  CLUS_1                          24                            17
  CLUS_2                          11                            14
  CLUS_3                          32                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q22.1) MUTATED        6     16      1     16
  DEL PEAK 13(4Q22.1) WILD-TYPE      9      7      6      9
D39V3, multiclass
        clus
vv       DEL PEAK 13(4Q22.1) MUTATED DEL PEAK 13(4Q22.1) WILD-TYPE
  CLUS_1                           6                             9
  CLUS_2                          16                             7
  CLUS_3                           1                             6
  CLUS_4                          16                             9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q22.1) MUTATED        6     13     16      4
  DEL PEAK 13(4Q22.1) WILD-TYPE      9      7     11      4
D39V4, multiclass
        clus
vv       DEL PEAK 13(4Q22.1) MUTATED DEL PEAK 13(4Q22.1) WILD-TYPE
  CLUS_1                           6                             9
  CLUS_2                          13                             7
  CLUS_3                          16                            11
  CLUS_4                           4                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q22.1) MUTATED       29     36      2
  DEL PEAK 13(4Q22.1) WILD-TYPE     18     32      8
D39V5, multiclass
        clus
vv       DEL PEAK 13(4Q22.1) MUTATED DEL PEAK 13(4Q22.1) WILD-TYPE
  CLUS_1                          29                            18
  CLUS_2                          36                            32
  CLUS_3                           2                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q22.1) MUTATED       22      8     20     17
  DEL PEAK 13(4Q22.1) WILD-TYPE     14      7     23     14
D39V6, multiclass
        clus
vv       DEL PEAK 13(4Q22.1) MUTATED DEL PEAK 13(4Q22.1) WILD-TYPE
  CLUS_1                          22                            14
  CLUS_2                           8                             7
  CLUS_3                          20                            23
  CLUS_4                          17                            14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q22.1) MUTATED       28     35      4
  DEL PEAK 13(4Q22.1) WILD-TYPE     17     29     12
D39V7, multiclass
        clus
vv       DEL PEAK 13(4Q22.1) MUTATED DEL PEAK 13(4Q22.1) WILD-TYPE
  CLUS_1                          28                            17
  CLUS_2                          35                            29
  CLUS_3                           4                            12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q22.1) MUTATED       26      4     37
  DEL PEAK 13(4Q22.1) WILD-TYPE     14      6     38
D39V8, multiclass
        clus
vv       DEL PEAK 13(4Q22.1) MUTATED DEL PEAK 13(4Q22.1) WILD-TYPE
  CLUS_1                          26                            14
  CLUS_2                           4                             6
  CLUS_3                          37                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(40) Variable = DEL PEAK 14(4Q31.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(4Q31.3) MUTATED       16     26     23
  DEL PEAK 14(4Q31.3) WILD-TYPE     26     26      9
D40V1, multiclass
        clus
vv       DEL PEAK 14(4Q31.3) MUTATED DEL PEAK 14(4Q31.3) WILD-TYPE
  CLUS_1                          16                            26
  CLUS_2                          26                            26
  CLUS_3                          23                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(4Q31.3) MUTATED       27      9     29
  DEL PEAK 14(4Q31.3) WILD-TYPE     14     16     31
D40V2, multiclass
        clus
vv       DEL PEAK 14(4Q31.3) MUTATED DEL PEAK 14(4Q31.3) WILD-TYPE
  CLUS_1                          27                            14
  CLUS_2                           9                            16
  CLUS_3                          29                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(4Q31.3) MUTATED        5     14      2     15
  DEL PEAK 14(4Q31.3) WILD-TYPE     10      9      5     10
D40V3, multiclass
        clus
vv       DEL PEAK 14(4Q31.3) MUTATED DEL PEAK 14(4Q31.3) WILD-TYPE
  CLUS_1                           5                            10
  CLUS_2                          14                             9
  CLUS_3                           2                             5
  CLUS_4                          15                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(4Q31.3) MUTATED        6     11     16      3
  DEL PEAK 14(4Q31.3) WILD-TYPE      9      9     11      5
D40V4, multiclass
        clus
vv       DEL PEAK 14(4Q31.3) MUTATED DEL PEAK 14(4Q31.3) WILD-TYPE
  CLUS_1                           6                             9
  CLUS_2                          11                             9
  CLUS_3                          16                            11
  CLUS_4                           3                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(4Q31.3) MUTATED       31     32      2
  DEL PEAK 14(4Q31.3) WILD-TYPE     16     36      8
D40V5, multiclass
        clus
vv       DEL PEAK 14(4Q31.3) MUTATED DEL PEAK 14(4Q31.3) WILD-TYPE
  CLUS_1                          31                            16
  CLUS_2                          32                            36
  CLUS_3                           2                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(4Q31.3) MUTATED       23      9     21     12
  DEL PEAK 14(4Q31.3) WILD-TYPE     13      6     22     19
D40V6, multiclass
        clus
vv       DEL PEAK 14(4Q31.3) MUTATED DEL PEAK 14(4Q31.3) WILD-TYPE
  CLUS_1                          23                            13
  CLUS_2                           9                             6
  CLUS_3                          21                            22
  CLUS_4                          12                            19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(4Q31.3) MUTATED       30     31      4
  DEL PEAK 14(4Q31.3) WILD-TYPE     15     33     12
D40V7, multiclass
        clus
vv       DEL PEAK 14(4Q31.3) MUTATED DEL PEAK 14(4Q31.3) WILD-TYPE
  CLUS_1                          30                            15
  CLUS_2                          31                            33
  CLUS_3                           4                            12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(4Q31.3) MUTATED       27      5     33
  DEL PEAK 14(4Q31.3) WILD-TYPE     13      5     42
D40V8, multiclass
        clus
vv       DEL PEAK 14(4Q31.3) MUTATED DEL PEAK 14(4Q31.3) WILD-TYPE
  CLUS_1                          27                            13
  CLUS_2                           5                             5
  CLUS_3                          33                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(41) Variable = DEL PEAK 15(5Q11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(5Q11.2) MUTATED       18     32     22
  DEL PEAK 15(5Q11.2) WILD-TYPE     24     20     10
D41V1, multiclass
        clus
vv       DEL PEAK 15(5Q11.2) MUTATED DEL PEAK 15(5Q11.2) WILD-TYPE
  CLUS_1                          18                            24
  CLUS_2                          32                            20
  CLUS_3                          22                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(5Q11.2) MUTATED       26      7     39
  DEL PEAK 15(5Q11.2) WILD-TYPE     15     18     21
D41V2, multiclass
        clus
vv       DEL PEAK 15(5Q11.2) MUTATED DEL PEAK 15(5Q11.2) WILD-TYPE
  CLUS_1                          26                            15
  CLUS_2                           7                            18
  CLUS_3                          39                            21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(5Q11.2) MUTATED        9     12      3     16
  DEL PEAK 15(5Q11.2) WILD-TYPE      6     11      4      9
D41V3, multiclass
        clus
vv       DEL PEAK 15(5Q11.2) MUTATED DEL PEAK 15(5Q11.2) WILD-TYPE
  CLUS_1                           9                             6
  CLUS_2                          12                            11
  CLUS_3                           3                             4
  CLUS_4                          16                             9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(5Q11.2) MUTATED        7     11     16      6
  DEL PEAK 15(5Q11.2) WILD-TYPE      8      9     11      2
D41V4, multiclass
        clus
vv       DEL PEAK 15(5Q11.2) MUTATED DEL PEAK 15(5Q11.2) WILD-TYPE
  CLUS_1                           7                             8
  CLUS_2                          11                             9
  CLUS_3                          16                            11
  CLUS_4                           6                             2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(5Q11.2) MUTATED       29     41      1
  DEL PEAK 15(5Q11.2) WILD-TYPE     18     27      9
D41V5, multiclass
        clus
vv       DEL PEAK 15(5Q11.2) MUTATED DEL PEAK 15(5Q11.2) WILD-TYPE
  CLUS_1                          29                            18
  CLUS_2                          41                            27
  CLUS_3                           1                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(5Q11.2) MUTATED       25      4     23     19
  DEL PEAK 15(5Q11.2) WILD-TYPE     11     11     20     12
D41V6, multiclass
        clus
vv       DEL PEAK 15(5Q11.2) MUTATED DEL PEAK 15(5Q11.2) WILD-TYPE
  CLUS_1                          25                            11
  CLUS_2                           4                            11
  CLUS_3                          23                            20
  CLUS_4                          19                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(5Q11.2) MUTATED       28     37      6
  DEL PEAK 15(5Q11.2) WILD-TYPE     17     27     10
D41V7, multiclass
        clus
vv       DEL PEAK 15(5Q11.2) MUTATED DEL PEAK 15(5Q11.2) WILD-TYPE
  CLUS_1                          28                            17
  CLUS_2                          37                            27
  CLUS_3                           6                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(5Q11.2) MUTATED       26      3     42
  DEL PEAK 15(5Q11.2) WILD-TYPE     14      7     33
D41V8, multiclass
        clus
vv       DEL PEAK 15(5Q11.2) MUTATED DEL PEAK 15(5Q11.2) WILD-TYPE
  CLUS_1                          26                            14
  CLUS_2                           3                             7
  CLUS_3                          42                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(42) Variable = DEL PEAK 16(5Q15) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(5Q15) MUTATED       18     34     20
  DEL PEAK 16(5Q15) WILD-TYPE     24     18     12
D42V1, multiclass
        clus
vv       DEL PEAK 16(5Q15) MUTATED DEL PEAK 16(5Q15) WILD-TYPE
  CLUS_1                        18                          24
  CLUS_2                        34                          18
  CLUS_3                        20                          12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(5Q15) MUTATED       24      9     39
  DEL PEAK 16(5Q15) WILD-TYPE     17     16     21
D42V2, multiclass
        clus
vv       DEL PEAK 16(5Q15) MUTATED DEL PEAK 16(5Q15) WILD-TYPE
  CLUS_1                        24                          17
  CLUS_2                         9                          16
  CLUS_3                        39                          21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(5Q15) MUTATED        8     13      5     15
  DEL PEAK 16(5Q15) WILD-TYPE      7     10      2     10
D42V3, multiclass
        clus
vv       DEL PEAK 16(5Q15) MUTATED DEL PEAK 16(5Q15) WILD-TYPE
  CLUS_1                         8                           7
  CLUS_2                        13                          10
  CLUS_3                         5                           2
  CLUS_4                        15                          10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(5Q15) MUTATED        9     12     15      5
  DEL PEAK 16(5Q15) WILD-TYPE      6      8     12      3
D42V4, multiclass
        clus
vv       DEL PEAK 16(5Q15) MUTATED DEL PEAK 16(5Q15) WILD-TYPE
  CLUS_1                         9                           6
  CLUS_2                        12                           8
  CLUS_3                        15                          12
  CLUS_4                         5                           3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(5Q15) MUTATED       27     43      1
  DEL PEAK 16(5Q15) WILD-TYPE     20     25      9
D42V5, multiclass
        clus
vv       DEL PEAK 16(5Q15) MUTATED DEL PEAK 16(5Q15) WILD-TYPE
  CLUS_1                        27                          20
  CLUS_2                        43                          25
  CLUS_3                         1                           9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(5Q15) MUTATED       23      4     27     17
  DEL PEAK 16(5Q15) WILD-TYPE     13     11     16     14
D42V6, multiclass
        clus
vv       DEL PEAK 16(5Q15) MUTATED DEL PEAK 16(5Q15) WILD-TYPE
  CLUS_1                        23                          13
  CLUS_2                         4                          11
  CLUS_3                        27                          16
  CLUS_4                        17                          14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(5Q15) MUTATED       26     39      6
  DEL PEAK 16(5Q15) WILD-TYPE     19     25     10
D42V7, multiclass
        clus
vv       DEL PEAK 16(5Q15) MUTATED DEL PEAK 16(5Q15) WILD-TYPE
  CLUS_1                        26                          19
  CLUS_2                        39                          25
  CLUS_3                         6                          10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(5Q15) MUTATED       24      3     44
  DEL PEAK 16(5Q15) WILD-TYPE     16      7     31
D42V8, multiclass
        clus
vv       DEL PEAK 16(5Q15) MUTATED DEL PEAK 16(5Q15) WILD-TYPE
  CLUS_1                        24                          16
  CLUS_2                         3                           7
  CLUS_3                        44                          31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(43) Variable = DEL PEAK 17(6P25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6P25.3) MUTATED        9     22     14
  DEL PEAK 17(6P25.3) WILD-TYPE     33     30     18
D43V1, multiclass
        clus
vv       DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE
  CLUS_1                           9                            33
  CLUS_2                          22                            30
  CLUS_3                          14                            18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6P25.3) MUTATED       19      6     20
  DEL PEAK 17(6P25.3) WILD-TYPE     22     19     40
D43V2, multiclass
        clus
vv       DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE
  CLUS_1                          19                            22
  CLUS_2                           6                            19
  CLUS_3                          20                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6P25.3) MUTATED        6      9      2     13
  DEL PEAK 17(6P25.3) WILD-TYPE      9     14      5     12
D43V3, multiclass
        clus
vv       DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE
  CLUS_1                           6                             9
  CLUS_2                           9                            14
  CLUS_3                           2                             5
  CLUS_4                          13                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6P25.3) MUTATED        6      8     14      2
  DEL PEAK 17(6P25.3) WILD-TYPE      9     12     13      6
D43V4, multiclass
        clus
vv       DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE
  CLUS_1                           6                             9
  CLUS_2                           8                            12
  CLUS_3                          14                            13
  CLUS_4                           2                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6P25.3) MUTATED       21     21      2
  DEL PEAK 17(6P25.3) WILD-TYPE     26     47      8
D43V5, multiclass
        clus
vv       DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE
  CLUS_1                          21                            26
  CLUS_2                          21                            47
  CLUS_3                           2                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6P25.3) MUTATED       17      4     19      4
  DEL PEAK 17(6P25.3) WILD-TYPE     19     11     24     27
D43V6, multiclass
        clus
vv       DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE
  CLUS_1                          17                            19
  CLUS_2                           4                            11
  CLUS_3                          19                            24
  CLUS_4                           4                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6P25.3) MUTATED       20     19      5
  DEL PEAK 17(6P25.3) WILD-TYPE     25     45     11
D43V7, multiclass
        clus
vv       DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE
  CLUS_1                          20                            25
  CLUS_2                          19                            45
  CLUS_3                           5                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6P25.3) MUTATED       19      2     23
  DEL PEAK 17(6P25.3) WILD-TYPE     21      8     52
D43V8, multiclass
        clus
vv       DEL PEAK 17(6P25.3) MUTATED DEL PEAK 17(6P25.3) WILD-TYPE
  CLUS_1                          19                            21
  CLUS_2                           2                             8
  CLUS_3                          23                            52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(44) Variable = DEL PEAK 18(6Q16.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(6Q16.3) MUTATED        9     20     11
  DEL PEAK 18(6Q16.3) WILD-TYPE     33     32     21
D44V1, multiclass
        clus
vv       DEL PEAK 18(6Q16.3) MUTATED DEL PEAK 18(6Q16.3) WILD-TYPE
  CLUS_1                           9                            33
  CLUS_2                          20                            32
  CLUS_3                          11                            21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(6Q16.3) MUTATED       13      6     21
  DEL PEAK 18(6Q16.3) WILD-TYPE     28     19     39
D44V2, multiclass
        clus
vv       DEL PEAK 18(6Q16.3) MUTATED DEL PEAK 18(6Q16.3) WILD-TYPE
  CLUS_1                          13                            28
  CLUS_2                           6                            19
  CLUS_3                          21                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(6Q16.3) MUTATED        3     10      1      7
  DEL PEAK 18(6Q16.3) WILD-TYPE     12     13      6     18
D44V3, multiclass
        clus
vv       DEL PEAK 18(6Q16.3) MUTATED DEL PEAK 18(6Q16.3) WILD-TYPE
  CLUS_1                           3                            12
  CLUS_2                          10                            13
  CLUS_3                           1                             6
  CLUS_4                           7                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(6Q16.3) MUTATED        3      9      7      2
  DEL PEAK 18(6Q16.3) WILD-TYPE     12     11     20      6
D44V4, multiclass
        clus
vv       DEL PEAK 18(6Q16.3) MUTATED DEL PEAK 18(6Q16.3) WILD-TYPE
  CLUS_1                           3                            12
  CLUS_2                           9                            11
  CLUS_3                           7                            20
  CLUS_4                           2                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(6Q16.3) MUTATED       14     25      1
  DEL PEAK 18(6Q16.3) WILD-TYPE     33     43      9
D44V5, multiclass
        clus
vv       DEL PEAK 18(6Q16.3) MUTATED DEL PEAK 18(6Q16.3) WILD-TYPE
  CLUS_1                          14                            33
  CLUS_2                          25                            43
  CLUS_3                           1                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(6Q16.3) MUTATED        9      6     17      8
  DEL PEAK 18(6Q16.3) WILD-TYPE     27      9     26     23
D44V6, multiclass
        clus
vv       DEL PEAK 18(6Q16.3) MUTATED DEL PEAK 18(6Q16.3) WILD-TYPE
  CLUS_1                           9                            27
  CLUS_2                           6                             9
  CLUS_3                          17                            26
  CLUS_4                           8                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(6Q16.3) MUTATED       14     23      3
  DEL PEAK 18(6Q16.3) WILD-TYPE     31     41     13
D44V7, multiclass
        clus
vv       DEL PEAK 18(6Q16.3) MUTATED DEL PEAK 18(6Q16.3) WILD-TYPE
  CLUS_1                          14                            31
  CLUS_2                          23                            41
  CLUS_3                           3                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(6Q16.3) MUTATED       11      4     25
  DEL PEAK 18(6Q16.3) WILD-TYPE     29      6     50
D44V8, multiclass
        clus
vv       DEL PEAK 18(6Q16.3) MUTATED DEL PEAK 18(6Q16.3) WILD-TYPE
  CLUS_1                          11                            29
  CLUS_2                           4                             6
  CLUS_3                          25                            50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(45) Variable = DEL PEAK 19(6Q26) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(6Q26) MUTATED        8     20      8
  DEL PEAK 19(6Q26) WILD-TYPE     34     32     24
D45V1, multiclass
        clus
vv       DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE
  CLUS_1                         8                          34
  CLUS_2                        20                          32
  CLUS_3                         8                          24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(6Q26) MUTATED        9      7     20
  DEL PEAK 19(6Q26) WILD-TYPE     32     18     40
D45V2, multiclass
        clus
vv       DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE
  CLUS_1                         9                          32
  CLUS_2                         7                          18
  CLUS_3                        20                          40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(6Q26) MUTATED        3     11      1      4
  DEL PEAK 19(6Q26) WILD-TYPE     12     12      6     21
D45V3, multiclass
        clus
vv       DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE
  CLUS_1                         3                          12
  CLUS_2                        11                          12
  CLUS_3                         1                           6
  CLUS_4                         4                          21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(6Q26) MUTATED        4      9      4      2
  DEL PEAK 19(6Q26) WILD-TYPE     11     11     23      6
D45V4, multiclass
        clus
vv       DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE
  CLUS_1                         4                          11
  CLUS_2                         9                          11
  CLUS_3                         4                          23
  CLUS_4                         2                           6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(6Q26) MUTATED       10     25      1
  DEL PEAK 19(6Q26) WILD-TYPE     37     43      9
D45V5, multiclass
        clus
vv       DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE
  CLUS_1                        10                          37
  CLUS_2                        25                          43
  CLUS_3                         1                           9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(6Q26) MUTATED        7      4     17      8
  DEL PEAK 19(6Q26) WILD-TYPE     29     11     26     23
D45V6, multiclass
        clus
vv       DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE
  CLUS_1                         7                          29
  CLUS_2                         4                          11
  CLUS_3                        17                          26
  CLUS_4                         8                          23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(6Q26) MUTATED       10     23      3
  DEL PEAK 19(6Q26) WILD-TYPE     35     41     13
D45V7, multiclass
        clus
vv       DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE
  CLUS_1                        10                          35
  CLUS_2                        23                          41
  CLUS_3                         3                          13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(6Q26) MUTATED        9      2     25
  DEL PEAK 19(6Q26) WILD-TYPE     31      8     50
D45V8, multiclass
        clus
vv       DEL PEAK 19(6Q26) MUTATED DEL PEAK 19(6Q26) WILD-TYPE
  CLUS_1                         9                          31
  CLUS_2                         2                           8
  CLUS_3                        25                          50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(46) Variable = DEL PEAK 20(7Q31.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(7Q31.1) MUTATED       14     12      8
  DEL PEAK 20(7Q31.1) WILD-TYPE     28     40     24
D46V1, multiclass
        clus
vv       DEL PEAK 20(7Q31.1) MUTATED DEL PEAK 20(7Q31.1) WILD-TYPE
  CLUS_1                          14                            28
  CLUS_2                          12                            40
  CLUS_3                           8                            24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(7Q31.1) MUTATED       16      6     12
  DEL PEAK 20(7Q31.1) WILD-TYPE     25     19     48
D46V2, multiclass
        clus
vv       DEL PEAK 20(7Q31.1) MUTATED DEL PEAK 20(7Q31.1) WILD-TYPE
  CLUS_1                          16                            25
  CLUS_2                           6                            19
  CLUS_3                          12                            48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(7Q31.1) MUTATED        2      9      1      8
  DEL PEAK 20(7Q31.1) WILD-TYPE     13     14      6     17
D46V3, multiclass
        clus
vv       DEL PEAK 20(7Q31.1) MUTATED DEL PEAK 20(7Q31.1) WILD-TYPE
  CLUS_1                           2                            13
  CLUS_2                           9                            14
  CLUS_3                           1                             6
  CLUS_4                           8                            17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(7Q31.1) MUTATED        3      6      8      3
  DEL PEAK 20(7Q31.1) WILD-TYPE     12     14     19      5
D46V4, multiclass
        clus
vv       DEL PEAK 20(7Q31.1) MUTATED DEL PEAK 20(7Q31.1) WILD-TYPE
  CLUS_1                           3                            12
  CLUS_2                           6                            14
  CLUS_3                           8                            19
  CLUS_4                           3                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(7Q31.1) MUTATED       16     16      2
  DEL PEAK 20(7Q31.1) WILD-TYPE     31     52      8
D46V5, multiclass
        clus
vv       DEL PEAK 20(7Q31.1) MUTATED DEL PEAK 20(7Q31.1) WILD-TYPE
  CLUS_1                          16                            31
  CLUS_2                          16                            52
  CLUS_3                           2                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(7Q31.1) MUTATED       13      3     10      8
  DEL PEAK 20(7Q31.1) WILD-TYPE     23     12     33     23
D46V6, multiclass
        clus
vv       DEL PEAK 20(7Q31.1) MUTATED DEL PEAK 20(7Q31.1) WILD-TYPE
  CLUS_1                          13                            23
  CLUS_2                           3                            12
  CLUS_3                          10                            33
  CLUS_4                           8                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(7Q31.1) MUTATED       16     14      4
  DEL PEAK 20(7Q31.1) WILD-TYPE     29     50     12
D46V7, multiclass
        clus
vv       DEL PEAK 20(7Q31.1) MUTATED DEL PEAK 20(7Q31.1) WILD-TYPE
  CLUS_1                          16                            29
  CLUS_2                          14                            50
  CLUS_3                           4                            12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(7Q31.1) MUTATED       14      2     18
  DEL PEAK 20(7Q31.1) WILD-TYPE     26      8     57
D46V8, multiclass
        clus
vv       DEL PEAK 20(7Q31.1) MUTATED DEL PEAK 20(7Q31.1) WILD-TYPE
  CLUS_1                          14                            26
  CLUS_2                           2                             8
  CLUS_3                          18                            57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(47) Variable = DEL PEAK 21(7Q36.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(7Q36.2) MUTATED       16     15     10
  DEL PEAK 21(7Q36.2) WILD-TYPE     26     37     22
D47V1, multiclass
        clus
vv       DEL PEAK 21(7Q36.2) MUTATED DEL PEAK 21(7Q36.2) WILD-TYPE
  CLUS_1                          16                            26
  CLUS_2                          15                            37
  CLUS_3                          10                            22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(7Q36.2) MUTATED       17      7     17
  DEL PEAK 21(7Q36.2) WILD-TYPE     24     18     43
D47V2, multiclass
        clus
vv       DEL PEAK 21(7Q36.2) MUTATED DEL PEAK 21(7Q36.2) WILD-TYPE
  CLUS_1                          17                            24
  CLUS_2                           7                            18
  CLUS_3                          17                            43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(7Q36.2) MUTATED        3     10      5      9
  DEL PEAK 21(7Q36.2) WILD-TYPE     12     13      2     16
D47V3, multiclass
        clus
vv       DEL PEAK 21(7Q36.2) MUTATED DEL PEAK 21(7Q36.2) WILD-TYPE
  CLUS_1                           3                            12
  CLUS_2                          10                            13
  CLUS_3                           5                             2
  CLUS_4                           9                            16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(7Q36.2) MUTATED        6      8     10      3
  DEL PEAK 21(7Q36.2) WILD-TYPE      9     12     17      5
D47V4, multiclass
        clus
vv       DEL PEAK 21(7Q36.2) MUTATED DEL PEAK 21(7Q36.2) WILD-TYPE
  CLUS_1                           6                             9
  CLUS_2                           8                            12
  CLUS_3                          10                            17
  CLUS_4                           3                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(7Q36.2) MUTATED       17     23      1
  DEL PEAK 21(7Q36.2) WILD-TYPE     30     45      9
D47V5, multiclass
        clus
vv       DEL PEAK 21(7Q36.2) MUTATED DEL PEAK 21(7Q36.2) WILD-TYPE
  CLUS_1                          17                            30
  CLUS_2                          23                            45
  CLUS_3                           1                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(7Q36.2) MUTATED       13      4     11     13
  DEL PEAK 21(7Q36.2) WILD-TYPE     23     11     32     18
D47V6, multiclass
        clus
vv       DEL PEAK 21(7Q36.2) MUTATED DEL PEAK 21(7Q36.2) WILD-TYPE
  CLUS_1                          13                            23
  CLUS_2                           4                            11
  CLUS_3                          11                            32
  CLUS_4                          13                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(7Q36.2) MUTATED       16     23      2
  DEL PEAK 21(7Q36.2) WILD-TYPE     29     41     14
D47V7, multiclass
        clus
vv       DEL PEAK 21(7Q36.2) MUTATED DEL PEAK 21(7Q36.2) WILD-TYPE
  CLUS_1                          16                            29
  CLUS_2                          23                            41
  CLUS_3                           2                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(7Q36.2) MUTATED       14      3     24
  DEL PEAK 21(7Q36.2) WILD-TYPE     26      7     51
D47V8, multiclass
        clus
vv       DEL PEAK 21(7Q36.2) MUTATED DEL PEAK 21(7Q36.2) WILD-TYPE
  CLUS_1                          14                            26
  CLUS_2                           3                             7
  CLUS_3                          24                            51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(48) Variable = DEL PEAK 22(8P23.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(8P23.2) MUTATED        9     32     16
  DEL PEAK 22(8P23.2) WILD-TYPE     33     20     16
D48V1, multiclass
        clus
vv       DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE
  CLUS_1                           9                            33
  CLUS_2                          32                            20
  CLUS_3                          16                            16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(8P23.2) MUTATED       16      8     33
  DEL PEAK 22(8P23.2) WILD-TYPE     25     17     27
D48V2, multiclass
        clus
vv       DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE
  CLUS_1                          16                            25
  CLUS_2                           8                            17
  CLUS_3                          33                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(8P23.2) MUTATED        4     15      5      9
  DEL PEAK 22(8P23.2) WILD-TYPE     11      8      2     16
D48V3, multiclass
        clus
vv       DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE
  CLUS_1                           4                            11
  CLUS_2                          15                             8
  CLUS_3                           5                             2
  CLUS_4                           9                            16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(8P23.2) MUTATED        6     13     10      4
  DEL PEAK 22(8P23.2) WILD-TYPE      9      7     17      4
D48V4, multiclass
        clus
vv       DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE
  CLUS_1                           6                             9
  CLUS_2                          13                             7
  CLUS_3                          10                            17
  CLUS_4                           4                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(8P23.2) MUTATED       18     38      1
  DEL PEAK 22(8P23.2) WILD-TYPE     29     30      9
D48V5, multiclass
        clus
vv       DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE
  CLUS_1                          18                            29
  CLUS_2                          38                            30
  CLUS_3                           1                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(8P23.2) MUTATED       14      4     23     16
  DEL PEAK 22(8P23.2) WILD-TYPE     22     11     20     15
D48V6, multiclass
        clus
vv       DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE
  CLUS_1                          14                            22
  CLUS_2                           4                            11
  CLUS_3                          23                            20
  CLUS_4                          16                            15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(8P23.2) MUTATED       16     35      6
  DEL PEAK 22(8P23.2) WILD-TYPE     29     29     10
D48V7, multiclass
        clus
vv       DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE
  CLUS_1                          16                            29
  CLUS_2                          35                            29
  CLUS_3                           6                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(8P23.2) MUTATED       16      2     39
  DEL PEAK 22(8P23.2) WILD-TYPE     24      8     36
D48V8, multiclass
        clus
vv       DEL PEAK 22(8P23.2) MUTATED DEL PEAK 22(8P23.2) WILD-TYPE
  CLUS_1                          16                            24
  CLUS_2                           2                             8
  CLUS_3                          39                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(49) Variable = DEL PEAK 23(9P21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P21.3) MUTATED       28     49     21
  DEL PEAK 23(9P21.3) WILD-TYPE     14      3     11
D49V1, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          28                            14
  CLUS_2                          49                             3
  CLUS_3                          21                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P21.3) MUTATED       30     18     50
  DEL PEAK 23(9P21.3) WILD-TYPE     11      7     10
D49V2, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          30                            11
  CLUS_2                          18                             7
  CLUS_3                          50                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9P21.3) MUTATED       13     22      7     17
  DEL PEAK 23(9P21.3) WILD-TYPE      2      1      0      8
D49V3, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          13                             2
  CLUS_2                          22                             1
  CLUS_3                           7                             0
  CLUS_4                          17                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9P21.3) MUTATED       15     19     19      6
  DEL PEAK 23(9P21.3) WILD-TYPE      0      1      8      2
D49V4, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          15                             0
  CLUS_2                          19                             1
  CLUS_3                          19                             8
  CLUS_4                           6                             2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P21.3) MUTATED       33     59      6
  DEL PEAK 23(9P21.3) WILD-TYPE     14      9      4
D49V5, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          33                            14
  CLUS_2                          59                             9
  CLUS_3                           6                             4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9P21.3) MUTATED       24     10     37     27
  DEL PEAK 23(9P21.3) WILD-TYPE     12      5      6      4
D49V6, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          24                            12
  CLUS_2                          10                             5
  CLUS_3                          37                             6
  CLUS_4                          27                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P21.3) MUTATED       31     55     12
  DEL PEAK 23(9P21.3) WILD-TYPE     14      9      4
D49V7, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          31                            14
  CLUS_2                          55                             9
  CLUS_3                          12                             4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P21.3) MUTATED       26      8     64
  DEL PEAK 23(9P21.3) WILD-TYPE     14      2     11
D49V8, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          26                            14
  CLUS_2                           8                             2
  CLUS_3                          64                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(50) Variable = DEL PEAK 24(10P15.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.1) MUTATED        9     20      6
  DEL PEAK 24(10P15.1) WILD-TYPE     33     32     26
D50V1, multiclass
        clus
vv       DEL PEAK 24(10P15.1) MUTATED DEL PEAK 24(10P15.1) WILD-TYPE
  CLUS_1                            9                             33
  CLUS_2                           20                             32
  CLUS_3                            6                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.1) MUTATED        8      8     19
  DEL PEAK 24(10P15.1) WILD-TYPE     33     17     41
D50V2, multiclass
        clus
vv       DEL PEAK 24(10P15.1) MUTATED DEL PEAK 24(10P15.1) WILD-TYPE
  CLUS_1                            8                             33
  CLUS_2                            8                             17
  CLUS_3                           19                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P15.1) MUTATED        5      9      4      7
  DEL PEAK 24(10P15.1) WILD-TYPE     10     14      3     18
D50V3, multiclass
        clus
vv       DEL PEAK 24(10P15.1) MUTATED DEL PEAK 24(10P15.1) WILD-TYPE
  CLUS_1                            5                             10
  CLUS_2                            9                             14
  CLUS_3                            4                              3
  CLUS_4                            7                             18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P15.1) MUTATED        8      8      8      1
  DEL PEAK 24(10P15.1) WILD-TYPE      7     12     19      7
D50V4, multiclass
        clus
vv       DEL PEAK 24(10P15.1) MUTATED DEL PEAK 24(10P15.1) WILD-TYPE
  CLUS_1                            8                              7
  CLUS_2                            8                             12
  CLUS_3                            8                             19
  CLUS_4                            1                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.1) MUTATED       10     23      2
  DEL PEAK 24(10P15.1) WILD-TYPE     37     45      8
D50V5, multiclass
        clus
vv       DEL PEAK 24(10P15.1) MUTATED DEL PEAK 24(10P15.1) WILD-TYPE
  CLUS_1                           10                             37
  CLUS_2                           23                             45
  CLUS_3                            2                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P15.1) MUTATED        6      5     18      6
  DEL PEAK 24(10P15.1) WILD-TYPE     30     10     25     25
D50V6, multiclass
        clus
vv       DEL PEAK 24(10P15.1) MUTATED DEL PEAK 24(10P15.1) WILD-TYPE
  CLUS_1                            6                             30
  CLUS_2                            5                             10
  CLUS_3                           18                             25
  CLUS_4                            6                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.1) MUTATED        8     22      5
  DEL PEAK 24(10P15.1) WILD-TYPE     37     42     11
D50V7, multiclass
        clus
vv       DEL PEAK 24(10P15.1) MUTATED DEL PEAK 24(10P15.1) WILD-TYPE
  CLUS_1                            8                             37
  CLUS_2                           22                             42
  CLUS_3                            5                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.1) MUTATED        7      4     24
  DEL PEAK 24(10P15.1) WILD-TYPE     33      6     51
D50V8, multiclass
        clus
vv       DEL PEAK 24(10P15.1) MUTATED DEL PEAK 24(10P15.1) WILD-TYPE
  CLUS_1                            7                             33
  CLUS_2                            4                              6
  CLUS_3                           24                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(51) Variable = DEL PEAK 25(10P11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P11.21) MUTATED        5     23      4
  DEL PEAK 25(10P11.21) WILD-TYPE     37     29     28
D51V1, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             5                              37
  CLUS_2                            23                              29
  CLUS_3                             4                              28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P11.21) MUTATED        3      5     24
  DEL PEAK 25(10P11.21) WILD-TYPE     38     20     36
D51V2, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             3                              38
  CLUS_2                             5                              20
  CLUS_3                            24                              36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10P11.21) MUTATED        5      9      3      3
  DEL PEAK 25(10P11.21) WILD-TYPE     10     14      4     22
D51V3, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             5                              10
  CLUS_2                             9                              14
  CLUS_3                             3                               4
  CLUS_4                             3                              22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10P11.21) MUTATED        7      9      3      1
  DEL PEAK 25(10P11.21) WILD-TYPE      8     11     24      7
D51V4, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             7                               8
  CLUS_2                             9                              11
  CLUS_3                             3                              24
  CLUS_4                             1                               7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P11.21) MUTATED        3     26      2
  DEL PEAK 25(10P11.21) WILD-TYPE     44     42      8
D51V5, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             3                              44
  CLUS_2                            26                              42
  CLUS_3                             2                               8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10P11.21) MUTATED        2      2     16     11
  DEL PEAK 25(10P11.21) WILD-TYPE     34     13     27     20
D51V6, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             2                              34
  CLUS_2                             2                              13
  CLUS_3                            16                              27
  CLUS_4                            11                              20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P11.21) MUTATED        3     26      2
  DEL PEAK 25(10P11.21) WILD-TYPE     42     38     14
D51V7, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             3                              42
  CLUS_2                            26                              38
  CLUS_3                             2                              14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P11.21) MUTATED        3      1     27
  DEL PEAK 25(10P11.21) WILD-TYPE     37      9     48
D51V8, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             3                              37
  CLUS_2                             1                               9
  CLUS_3                            27                              48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(52) Variable = DEL PEAK 26(10Q22.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q22.3) MUTATED        8     23      8
  DEL PEAK 26(10Q22.3) WILD-TYPE     34     29     24
D52V1, multiclass
        clus
vv       DEL PEAK 26(10Q22.3) MUTATED DEL PEAK 26(10Q22.3) WILD-TYPE
  CLUS_1                            8                             34
  CLUS_2                           23                             29
  CLUS_3                            8                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q22.3) MUTATED        7      6     26
  DEL PEAK 26(10Q22.3) WILD-TYPE     34     19     34
D52V2, multiclass
        clus
vv       DEL PEAK 26(10Q22.3) MUTATED DEL PEAK 26(10Q22.3) WILD-TYPE
  CLUS_1                            7                             34
  CLUS_2                            6                             19
  CLUS_3                           26                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(10Q22.3) MUTATED        5     13      2      7
  DEL PEAK 26(10Q22.3) WILD-TYPE     10     10      5     18
D52V3, multiclass
        clus
vv       DEL PEAK 26(10Q22.3) MUTATED DEL PEAK 26(10Q22.3) WILD-TYPE
  CLUS_1                            5                             10
  CLUS_2                           13                             10
  CLUS_3                            2                              5
  CLUS_4                            7                             18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(10Q22.3) MUTATED        5     12      7      3
  DEL PEAK 26(10Q22.3) WILD-TYPE     10      8     20      5
D52V4, multiclass
        clus
vv       DEL PEAK 26(10Q22.3) MUTATED DEL PEAK 26(10Q22.3) WILD-TYPE
  CLUS_1                            5                             10
  CLUS_2                           12                              8
  CLUS_3                            7                             20
  CLUS_4                            3                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q22.3) MUTATED        9     27      3
  DEL PEAK 26(10Q22.3) WILD-TYPE     38     41      7
D52V5, multiclass
        clus
vv       DEL PEAK 26(10Q22.3) MUTATED DEL PEAK 26(10Q22.3) WILD-TYPE
  CLUS_1                            9                             38
  CLUS_2                           27                             41
  CLUS_3                            3                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(10Q22.3) MUTATED        7      3     21      8
  DEL PEAK 26(10Q22.3) WILD-TYPE     29     12     22     23
D52V6, multiclass
        clus
vv       DEL PEAK 26(10Q22.3) MUTATED DEL PEAK 26(10Q22.3) WILD-TYPE
  CLUS_1                            7                             29
  CLUS_2                            3                             12
  CLUS_3                           21                             22
  CLUS_4                            8                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q22.3) MUTATED        9     26      4
  DEL PEAK 26(10Q22.3) WILD-TYPE     36     38     12
D52V7, multiclass
        clus
vv       DEL PEAK 26(10Q22.3) MUTATED DEL PEAK 26(10Q22.3) WILD-TYPE
  CLUS_1                            9                             36
  CLUS_2                           26                             38
  CLUS_3                            4                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q22.3) MUTATED        9      1     29
  DEL PEAK 26(10Q22.3) WILD-TYPE     31      9     46
D52V8, multiclass
        clus
vv       DEL PEAK 26(10Q22.3) MUTATED DEL PEAK 26(10Q22.3) WILD-TYPE
  CLUS_1                            9                             31
  CLUS_2                            1                              9
  CLUS_3                           29                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(53) Variable = DEL PEAK 27(10Q23.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10Q23.31) MUTATED       11     23     13
  DEL PEAK 27(10Q23.31) WILD-TYPE     31     29     19
D53V1, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            11                              31
  CLUS_2                            23                              29
  CLUS_3                            13                              19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10Q23.31) MUTATED       11      8     28
  DEL PEAK 27(10Q23.31) WILD-TYPE     30     17     32
D53V2, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            11                              30
  CLUS_2                             8                              17
  CLUS_3                            28                              32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(10Q23.31) MUTATED        6     13      2     13
  DEL PEAK 27(10Q23.31) WILD-TYPE      9     10      5     12
D53V3, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                             6                               9
  CLUS_2                            13                              10
  CLUS_3                             2                               5
  CLUS_4                            13                              12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(10Q23.31) MUTATED        5     12     13      4
  DEL PEAK 27(10Q23.31) WILD-TYPE     10      8     14      4
D53V4, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                             5                              10
  CLUS_2                            12                               8
  CLUS_3                            13                              14
  CLUS_4                             4                               4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10Q23.31) MUTATED       15     29      3
  DEL PEAK 27(10Q23.31) WILD-TYPE     32     39      7
D53V5, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            15                              32
  CLUS_2                            29                              39
  CLUS_3                             3                               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(10Q23.31) MUTATED       10      6     21     10
  DEL PEAK 27(10Q23.31) WILD-TYPE     26      9     22     21
D53V6, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            10                              26
  CLUS_2                             6                               9
  CLUS_3                            21                              22
  CLUS_4                            10                              21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10Q23.31) MUTATED       14     28      5
  DEL PEAK 27(10Q23.31) WILD-TYPE     31     36     11
D53V7, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            14                              31
  CLUS_2                            28                              36
  CLUS_3                             5                              11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10Q23.31) MUTATED       13      3     31
  DEL PEAK 27(10Q23.31) WILD-TYPE     27      7     44
D53V8, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            13                              27
  CLUS_2                             3                               7
  CLUS_3                            31                              44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(54) Variable = DEL PEAK 28(11P15.4) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P15.4) MUTATED       13     27     14
  DEL PEAK 28(11P15.4) WILD-TYPE     29     25     18
D54V1, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           13                             29
  CLUS_2                           27                             25
  CLUS_3                           14                             18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P15.4) MUTATED       16      8     30
  DEL PEAK 28(11P15.4) WILD-TYPE     25     17     30
D54V2, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           16                             25
  CLUS_2                            8                             17
  CLUS_3                           30                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11P15.4) MUTATED        5     16      3      9
  DEL PEAK 28(11P15.4) WILD-TYPE     10      7      4     16
D54V3, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                            5                             10
  CLUS_2                           16                              7
  CLUS_3                            3                              4
  CLUS_4                            9                             16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11P15.4) MUTATED        8     14      9      2
  DEL PEAK 28(11P15.4) WILD-TYPE      7      6     18      6
D54V4, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                            8                              7
  CLUS_2                           14                              6
  CLUS_3                            9                             18
  CLUS_4                            2                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P15.4) MUTATED       19     31      4
  DEL PEAK 28(11P15.4) WILD-TYPE     28     37      6
D54V5, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           19                             28
  CLUS_2                           31                             37
  CLUS_3                            4                              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11P15.4) MUTATED       13      6     24     11
  DEL PEAK 28(11P15.4) WILD-TYPE     23      9     19     20
D54V6, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           13                             23
  CLUS_2                            6                              9
  CLUS_3                           24                             19
  CLUS_4                           11                             20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P15.4) MUTATED       18     30      6
  DEL PEAK 28(11P15.4) WILD-TYPE     27     34     10
D54V7, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           18                             27
  CLUS_2                           30                             34
  CLUS_3                            6                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P15.4) MUTATED       14      5     35
  DEL PEAK 28(11P15.4) WILD-TYPE     26      5     40
D54V8, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           14                             26
  CLUS_2                            5                              5
  CLUS_3                           35                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(55) Variable = DEL PEAK 29(11Q24.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q24.3) MUTATED       10     34     12
  DEL PEAK 29(11Q24.3) WILD-TYPE     32     18     20
D55V1, multiclass
        clus
vv       DEL PEAK 29(11Q24.3) MUTATED DEL PEAK 29(11Q24.3) WILD-TYPE
  CLUS_1                           10                             32
  CLUS_2                           34                             18
  CLUS_3                           12                             20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q24.3) MUTATED       16      8     32
  DEL PEAK 29(11Q24.3) WILD-TYPE     25     17     28
D55V2, multiclass
        clus
vv       DEL PEAK 29(11Q24.3) MUTATED DEL PEAK 29(11Q24.3) WILD-TYPE
  CLUS_1                           16                             25
  CLUS_2                            8                             17
  CLUS_3                           32                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11Q24.3) MUTATED        8     12      5     11
  DEL PEAK 29(11Q24.3) WILD-TYPE      7     11      2     14
D55V3, multiclass
        clus
vv       DEL PEAK 29(11Q24.3) MUTATED DEL PEAK 29(11Q24.3) WILD-TYPE
  CLUS_1                            8                              7
  CLUS_2                           12                             11
  CLUS_3                            5                              2
  CLUS_4                           11                             14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11Q24.3) MUTATED        9      9     12      6
  DEL PEAK 29(11Q24.3) WILD-TYPE      6     11     15      2
D55V4, multiclass
        clus
vv       DEL PEAK 29(11Q24.3) MUTATED DEL PEAK 29(11Q24.3) WILD-TYPE
  CLUS_1                            9                              6
  CLUS_2                            9                             11
  CLUS_3                           12                             15
  CLUS_4                            6                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q24.3) MUTATED       17     36      2
  DEL PEAK 29(11Q24.3) WILD-TYPE     30     32      8
D55V5, multiclass
        clus
vv       DEL PEAK 29(11Q24.3) MUTATED DEL PEAK 29(11Q24.3) WILD-TYPE
  CLUS_1                           17                             30
  CLUS_2                           36                             32
  CLUS_3                            2                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11Q24.3) MUTATED       10      7     23     15
  DEL PEAK 29(11Q24.3) WILD-TYPE     26      8     20     16
D55V6, multiclass
        clus
vv       DEL PEAK 29(11Q24.3) MUTATED DEL PEAK 29(11Q24.3) WILD-TYPE
  CLUS_1                           10                             26
  CLUS_2                            7                              8
  CLUS_3                           23                             20
  CLUS_4                           15                             16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q24.3) MUTATED       15     33      7
  DEL PEAK 29(11Q24.3) WILD-TYPE     30     31      9
D55V7, multiclass
        clus
vv       DEL PEAK 29(11Q24.3) MUTATED DEL PEAK 29(11Q24.3) WILD-TYPE
  CLUS_1                           15                             30
  CLUS_2                           33                             31
  CLUS_3                            7                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q24.3) MUTATED       12      5     38
  DEL PEAK 29(11Q24.3) WILD-TYPE     28      5     37
D55V8, multiclass
        clus
vv       DEL PEAK 29(11Q24.3) MUTATED DEL PEAK 29(11Q24.3) WILD-TYPE
  CLUS_1                           12                             28
  CLUS_2                            5                              5
  CLUS_3                           38                             37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(56) Variable = DEL PEAK 30(12Q21.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q21.2) MUTATED        9     11      9
  DEL PEAK 30(12Q21.2) WILD-TYPE     33     41     23
D56V1, multiclass
        clus
vv       DEL PEAK 30(12Q21.2) MUTATED DEL PEAK 30(12Q21.2) WILD-TYPE
  CLUS_1                            9                             33
  CLUS_2                           11                             41
  CLUS_3                            9                             23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q21.2) MUTATED       13      6     10
  DEL PEAK 30(12Q21.2) WILD-TYPE     28     19     50
D56V2, multiclass
        clus
vv       DEL PEAK 30(12Q21.2) MUTATED DEL PEAK 30(12Q21.2) WILD-TYPE
  CLUS_1                           13                             28
  CLUS_2                            6                             19
  CLUS_3                           10                             50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q21.2) MUTATED        2      5      3     10
  DEL PEAK 30(12Q21.2) WILD-TYPE     13     18      4     15
D56V3, multiclass
        clus
vv       DEL PEAK 30(12Q21.2) MUTATED DEL PEAK 30(12Q21.2) WILD-TYPE
  CLUS_1                            2                             13
  CLUS_2                            5                             18
  CLUS_3                            3                              4
  CLUS_4                           10                             15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q21.2) MUTATED        4      5     11      0
  DEL PEAK 30(12Q21.2) WILD-TYPE     11     15     16      8
D56V4, multiclass
        clus
vv       DEL PEAK 30(12Q21.2) MUTATED DEL PEAK 30(12Q21.2) WILD-TYPE
  CLUS_1                            4                             11
  CLUS_2                            5                             15
  CLUS_3                           11                             16
  CLUS_4                            0                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q21.2) MUTATED       15     12      2
  DEL PEAK 30(12Q21.2) WILD-TYPE     32     56      8
D56V5, multiclass
        clus
vv       DEL PEAK 30(12Q21.2) MUTATED DEL PEAK 30(12Q21.2) WILD-TYPE
  CLUS_1                           15                             32
  CLUS_2                           12                             56
  CLUS_3                            2                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q21.2) MUTATED       11      4     11      3
  DEL PEAK 30(12Q21.2) WILD-TYPE     25     11     32     28
D56V6, multiclass
        clus
vv       DEL PEAK 30(12Q21.2) MUTATED DEL PEAK 30(12Q21.2) WILD-TYPE
  CLUS_1                           11                             25
  CLUS_2                            4                             11
  CLUS_3                           11                             32
  CLUS_4                            3                             28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q21.2) MUTATED       14     12      3
  DEL PEAK 30(12Q21.2) WILD-TYPE     31     52     13
D56V7, multiclass
        clus
vv       DEL PEAK 30(12Q21.2) MUTATED DEL PEAK 30(12Q21.2) WILD-TYPE
  CLUS_1                           14                             31
  CLUS_2                           12                             52
  CLUS_3                            3                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q21.2) MUTATED       11      4     14
  DEL PEAK 30(12Q21.2) WILD-TYPE     29      6     61
D56V8, multiclass
        clus
vv       DEL PEAK 30(12Q21.2) MUTATED DEL PEAK 30(12Q21.2) WILD-TYPE
  CLUS_1                           11                             29
  CLUS_2                            4                              6
  CLUS_3                           14                             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(57) Variable = DEL PEAK 31(13Q12.11) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       13     32     11
  DEL PEAK 31(13Q12.11) WILD-TYPE     29     20     21
D57V1, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            13                              29
  CLUS_2                            32                              20
  CLUS_3                            11                              21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       12     10     34
  DEL PEAK 31(13Q12.11) WILD-TYPE     29     15     26
D57V2, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            12                              29
  CLUS_2                            10                              15
  CLUS_3                            34                              26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(13Q12.11) MUTATED        6     16      2      7
  DEL PEAK 31(13Q12.11) WILD-TYPE      9      7      5     18
D57V3, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                             6                               9
  CLUS_2                            16                               7
  CLUS_3                             2                               5
  CLUS_4                             7                              18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(13Q12.11) MUTATED        7     13      7      4
  DEL PEAK 31(13Q12.11) WILD-TYPE      8      7     20      4
D57V4, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                             7                               8
  CLUS_2                            13                               7
  CLUS_3                             7                              20
  CLUS_4                             4                               4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       13     39      4
  DEL PEAK 31(13Q12.11) WILD-TYPE     34     29      6
D57V5, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            13                              34
  CLUS_2                            39                              29
  CLUS_3                             4                               6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(13Q12.11) MUTATED       10      4     23     19
  DEL PEAK 31(13Q12.11) WILD-TYPE     26     11     20     12
D57V6, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            10                              26
  CLUS_2                             4                              11
  CLUS_3                            23                              20
  CLUS_4                            19                              12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       13     36      7
  DEL PEAK 31(13Q12.11) WILD-TYPE     32     28      9
D57V7, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            13                              32
  CLUS_2                            36                              28
  CLUS_3                             7                               9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       11      3     42
  DEL PEAK 31(13Q12.11) WILD-TYPE     29      7     33
D57V8, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            11                              29
  CLUS_2                             3                               7
  CLUS_3                            42                              33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(58) Variable = DEL PEAK 32(13Q14.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       13     32     14
  DEL PEAK 32(13Q14.2) WILD-TYPE     29     20     18
D58V1, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           13                             29
  CLUS_2                           32                             20
  CLUS_3                           14                             18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       15      7     37
  DEL PEAK 32(13Q14.2) WILD-TYPE     26     18     23
D58V2, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           15                             26
  CLUS_2                            7                             18
  CLUS_3                           37                             23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED        7     16      2      7
  DEL PEAK 32(13Q14.2) WILD-TYPE      8      7      5     18
D58V3, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                            7                              8
  CLUS_2                           16                              7
  CLUS_3                            2                              5
  CLUS_4                            7                             18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED        7     13      7      5
  DEL PEAK 32(13Q14.2) WILD-TYPE      8      7     20      3
D58V4, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                            7                              8
  CLUS_2                           13                              7
  CLUS_3                            7                             20
  CLUS_4                            5                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       15     40      3
  DEL PEAK 32(13Q14.2) WILD-TYPE     32     28      7
D58V5, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           15                             32
  CLUS_2                           40                             28
  CLUS_3                            3                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       13      3     24     18
  DEL PEAK 32(13Q14.2) WILD-TYPE     23     12     19     13
D58V6, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           13                             23
  CLUS_2                            3                             12
  CLUS_3                           24                             19
  CLUS_4                           18                             13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       15     37      6
  DEL PEAK 32(13Q14.2) WILD-TYPE     30     27     10
D58V7, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           15                             30
  CLUS_2                           37                             27
  CLUS_3                            6                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       13      3     42
  DEL PEAK 32(13Q14.2) WILD-TYPE     27      7     33
D58V8, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           13                             27
  CLUS_2                            3                              7
  CLUS_3                           42                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(59) Variable = DEL PEAK 33(13Q21.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q21.2) MUTATED       11     27     13
  DEL PEAK 33(13Q21.2) WILD-TYPE     31     25     19
D59V1, multiclass
        clus
vv       DEL PEAK 33(13Q21.2) MUTATED DEL PEAK 33(13Q21.2) WILD-TYPE
  CLUS_1                           11                             31
  CLUS_2                           27                             25
  CLUS_3                           13                             19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q21.2) MUTATED       14      7     30
  DEL PEAK 33(13Q21.2) WILD-TYPE     27     18     30
D59V2, multiclass
        clus
vv       DEL PEAK 33(13Q21.2) MUTATED DEL PEAK 33(13Q21.2) WILD-TYPE
  CLUS_1                           14                             27
  CLUS_2                            7                             18
  CLUS_3                           30                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(13Q21.2) MUTATED        6     13      2      8
  DEL PEAK 33(13Q21.2) WILD-TYPE      9     10      5     17
D59V3, multiclass
        clus
vv       DEL PEAK 33(13Q21.2) MUTATED DEL PEAK 33(13Q21.2) WILD-TYPE
  CLUS_1                            6                              9
  CLUS_2                           13                             10
  CLUS_3                            2                              5
  CLUS_4                            8                             17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(13Q21.2) MUTATED        7     10      8      4
  DEL PEAK 33(13Q21.2) WILD-TYPE      8     10     19      4
D59V4, multiclass
        clus
vv       DEL PEAK 33(13Q21.2) MUTATED DEL PEAK 33(13Q21.2) WILD-TYPE
  CLUS_1                            7                              8
  CLUS_2                           10                             10
  CLUS_3                            8                             19
  CLUS_4                            4                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q21.2) MUTATED       14     34      3
  DEL PEAK 33(13Q21.2) WILD-TYPE     33     34      7
D59V5, multiclass
        clus
vv       DEL PEAK 33(13Q21.2) MUTATED DEL PEAK 33(13Q21.2) WILD-TYPE
  CLUS_1                           14                             33
  CLUS_2                           34                             34
  CLUS_3                            3                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(13Q21.2) MUTATED       12      3     21     15
  DEL PEAK 33(13Q21.2) WILD-TYPE     24     12     22     16
D59V6, multiclass
        clus
vv       DEL PEAK 33(13Q21.2) MUTATED DEL PEAK 33(13Q21.2) WILD-TYPE
  CLUS_1                           12                             24
  CLUS_2                            3                             12
  CLUS_3                           21                             22
  CLUS_4                           15                             16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q21.2) MUTATED       14     31      6
  DEL PEAK 33(13Q21.2) WILD-TYPE     31     33     10
D59V7, multiclass
        clus
vv       DEL PEAK 33(13Q21.2) MUTATED DEL PEAK 33(13Q21.2) WILD-TYPE
  CLUS_1                           14                             31
  CLUS_2                           31                             33
  CLUS_3                            6                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q21.2) MUTATED       13      2     36
  DEL PEAK 33(13Q21.2) WILD-TYPE     27      8     39
D59V8, multiclass
        clus
vv       DEL PEAK 33(13Q21.2) MUTATED DEL PEAK 33(13Q21.2) WILD-TYPE
  CLUS_1                           13                             27
  CLUS_2                            2                              8
  CLUS_3                           36                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(60) Variable = DEL PEAK 34(14Q31.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q31.1) MUTATED       17     10     17
  DEL PEAK 34(14Q31.1) WILD-TYPE     25     42     15
D60V1, multiclass
        clus
vv       DEL PEAK 34(14Q31.1) MUTATED DEL PEAK 34(14Q31.1) WILD-TYPE
  CLUS_1                           17                             25
  CLUS_2                           10                             42
  CLUS_3                           17                             15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q31.1) MUTATED       23      6     15
  DEL PEAK 34(14Q31.1) WILD-TYPE     18     19     45
D60V2, multiclass
        clus
vv       DEL PEAK 34(14Q31.1) MUTATED DEL PEAK 34(14Q31.1) WILD-TYPE
  CLUS_1                           23                             18
  CLUS_2                            6                             19
  CLUS_3                           15                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(14Q31.1) MUTATED        5      2      2     12
  DEL PEAK 34(14Q31.1) WILD-TYPE     10     21      5     13
D60V3, multiclass
        clus
vv       DEL PEAK 34(14Q31.1) MUTATED DEL PEAK 34(14Q31.1) WILD-TYPE
  CLUS_1                            5                             10
  CLUS_2                            2                             21
  CLUS_3                            2                              5
  CLUS_4                           12                             13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(14Q31.1) MUTATED        5      1     12      3
  DEL PEAK 34(14Q31.1) WILD-TYPE     10     19     15      5
D60V4, multiclass
        clus
vv       DEL PEAK 34(14Q31.1) MUTATED DEL PEAK 34(14Q31.1) WILD-TYPE
  CLUS_1                            5                             10
  CLUS_2                            1                             19
  CLUS_3                           12                             15
  CLUS_4                            3                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q31.1) MUTATED       24     17      3
  DEL PEAK 34(14Q31.1) WILD-TYPE     23     51      7
D60V5, multiclass
        clus
vv       DEL PEAK 34(14Q31.1) MUTATED DEL PEAK 34(14Q31.1) WILD-TYPE
  CLUS_1                           24                             23
  CLUS_2                           17                             51
  CLUS_3                            3                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(14Q31.1) MUTATED       21      3     14      6
  DEL PEAK 34(14Q31.1) WILD-TYPE     15     12     29     25
D60V6, multiclass
        clus
vv       DEL PEAK 34(14Q31.1) MUTATED DEL PEAK 34(14Q31.1) WILD-TYPE
  CLUS_1                           21                             15
  CLUS_2                            3                             12
  CLUS_3                           14                             29
  CLUS_4                            6                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q31.1) MUTATED       24     15      5
  DEL PEAK 34(14Q31.1) WILD-TYPE     21     49     11
D60V7, multiclass
        clus
vv       DEL PEAK 34(14Q31.1) MUTATED DEL PEAK 34(14Q31.1) WILD-TYPE
  CLUS_1                           24                             21
  CLUS_2                           15                             49
  CLUS_3                            5                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q31.1) MUTATED       22      2     20
  DEL PEAK 34(14Q31.1) WILD-TYPE     18      8     55
D60V8, multiclass
        clus
vv       DEL PEAK 34(14Q31.1) MUTATED DEL PEAK 34(14Q31.1) WILD-TYPE
  CLUS_1                           22                             18
  CLUS_2                            2                              8
  CLUS_3                           20                             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(61) Variable = DEL PEAK 35(15Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q11.2) MUTATED       14     14     13
  DEL PEAK 35(15Q11.2) WILD-TYPE     28     38     19
D61V1, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           14                             28
  CLUS_2                           14                             38
  CLUS_3                           13                             19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q11.2) MUTATED       17      6     18
  DEL PEAK 35(15Q11.2) WILD-TYPE     24     19     42
D61V2, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           17                             24
  CLUS_2                            6                             19
  CLUS_3                           18                             42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(15Q11.2) MUTATED        6      7      3     11
  DEL PEAK 35(15Q11.2) WILD-TYPE      9     16      4     14
D61V3, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                            6                              9
  CLUS_2                            7                             16
  CLUS_3                            3                              4
  CLUS_4                           11                             14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(15Q11.2) MUTATED        5      7     12      3
  DEL PEAK 35(15Q11.2) WILD-TYPE     10     13     15      5
D61V4, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                            5                             10
  CLUS_2                            7                             13
  CLUS_3                           12                             15
  CLUS_4                            3                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q11.2) MUTATED       18     21      2
  DEL PEAK 35(15Q11.2) WILD-TYPE     29     47      8
D61V5, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           18                             29
  CLUS_2                           21                             47
  CLUS_3                            2                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(15Q11.2) MUTATED       11      8     14      8
  DEL PEAK 35(15Q11.2) WILD-TYPE     25      7     29     23
D61V6, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           11                             25
  CLUS_2                            8                              7
  CLUS_3                           14                             29
  CLUS_4                            8                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q11.2) MUTATED       18     20      3
  DEL PEAK 35(15Q11.2) WILD-TYPE     27     44     13
D61V7, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           18                             27
  CLUS_2                           20                             44
  CLUS_3                            3                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q11.2) MUTATED       13      6     22
  DEL PEAK 35(15Q11.2) WILD-TYPE     27      4     53
D61V8, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           13                             27
  CLUS_2                            6                              4
  CLUS_3                           22                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(62) Variable = DEL PEAK 36(16Q23.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16Q23.1) MUTATED       18     10     25
  DEL PEAK 36(16Q23.1) WILD-TYPE     24     42      7
D62V1, multiclass
        clus
vv       DEL PEAK 36(16Q23.1) MUTATED DEL PEAK 36(16Q23.1) WILD-TYPE
  CLUS_1                           18                             24
  CLUS_2                           10                             42
  CLUS_3                           25                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16Q23.1) MUTATED       31      8     14
  DEL PEAK 36(16Q23.1) WILD-TYPE     10     17     46
D62V2, multiclass
        clus
vv       DEL PEAK 36(16Q23.1) MUTATED DEL PEAK 36(16Q23.1) WILD-TYPE
  CLUS_1                           31                             10
  CLUS_2                            8                             17
  CLUS_3                           14                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(16Q23.1) MUTATED        2      6      4     17
  DEL PEAK 36(16Q23.1) WILD-TYPE     13     17      3      8
D62V3, multiclass
        clus
vv       DEL PEAK 36(16Q23.1) MUTATED DEL PEAK 36(16Q23.1) WILD-TYPE
  CLUS_1                            2                             13
  CLUS_2                            6                             17
  CLUS_3                            4                              3
  CLUS_4                           17                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(16Q23.1) MUTATED        3      5     18      3
  DEL PEAK 36(16Q23.1) WILD-TYPE     12     15      9      5
D62V4, multiclass
        clus
vv       DEL PEAK 36(16Q23.1) MUTATED DEL PEAK 36(16Q23.1) WILD-TYPE
  CLUS_1                            3                             12
  CLUS_2                            5                             15
  CLUS_3                           18                              9
  CLUS_4                            3                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16Q23.1) MUTATED       34     17      1
  DEL PEAK 36(16Q23.1) WILD-TYPE     13     51      9
D62V5, multiclass
        clus
vv       DEL PEAK 36(16Q23.1) MUTATED DEL PEAK 36(16Q23.1) WILD-TYPE
  CLUS_1                           34                             13
  CLUS_2                           17                             51
  CLUS_3                            1                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(16Q23.1) MUTATED       27      8      8      9
  DEL PEAK 36(16Q23.1) WILD-TYPE      9      7     35     22
D62V6, multiclass
        clus
vv       DEL PEAK 36(16Q23.1) MUTATED DEL PEAK 36(16Q23.1) WILD-TYPE
  CLUS_1                           27                              9
  CLUS_2                            8                              7
  CLUS_3                            8                             35
  CLUS_4                            9                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16Q23.1) MUTATED       34     16      2
  DEL PEAK 36(16Q23.1) WILD-TYPE     11     48     14
D62V7, multiclass
        clus
vv       DEL PEAK 36(16Q23.1) MUTATED DEL PEAK 36(16Q23.1) WILD-TYPE
  CLUS_1                           34                             11
  CLUS_2                           16                             48
  CLUS_3                            2                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16Q23.1) MUTATED       31      4     17
  DEL PEAK 36(16Q23.1) WILD-TYPE      9      6     58
D62V8, multiclass
        clus
vv       DEL PEAK 36(16Q23.1) MUTATED DEL PEAK 36(16Q23.1) WILD-TYPE
  CLUS_1                           31                              9
  CLUS_2                            4                              6
  CLUS_3                           17                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(63) Variable = DEL PEAK 37(17P11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(17P11.2) MUTATED       17     20     20
  DEL PEAK 37(17P11.2) WILD-TYPE     25     32     12
D63V1, multiclass
        clus
vv       DEL PEAK 37(17P11.2) MUTATED DEL PEAK 37(17P11.2) WILD-TYPE
  CLUS_1                           17                             25
  CLUS_2                           20                             32
  CLUS_3                           20                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(17P11.2) MUTATED       27     10     20
  DEL PEAK 37(17P11.2) WILD-TYPE     14     15     40
D63V2, multiclass
        clus
vv       DEL PEAK 37(17P11.2) MUTATED DEL PEAK 37(17P11.2) WILD-TYPE
  CLUS_1                           27                             14
  CLUS_2                           10                             15
  CLUS_3                           20                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(17P11.2) MUTATED        4      8      4     18
  DEL PEAK 37(17P11.2) WILD-TYPE     11     15      3      7
D63V3, multiclass
        clus
vv       DEL PEAK 37(17P11.2) MUTATED DEL PEAK 37(17P11.2) WILD-TYPE
  CLUS_1                            4                             11
  CLUS_2                            8                             15
  CLUS_3                            4                              3
  CLUS_4                           18                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(17P11.2) MUTATED        5      7     19      3
  DEL PEAK 37(17P11.2) WILD-TYPE     10     13      8      5
D63V4, multiclass
        clus
vv       DEL PEAK 37(17P11.2) MUTATED DEL PEAK 37(17P11.2) WILD-TYPE
  CLUS_1                            5                             10
  CLUS_2                            7                             13
  CLUS_3                           19                              8
  CLUS_4                            3                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(17P11.2) MUTATED       32     24      1
  DEL PEAK 37(17P11.2) WILD-TYPE     15     44      9
D63V5, multiclass
        clus
vv       DEL PEAK 37(17P11.2) MUTATED DEL PEAK 37(17P11.2) WILD-TYPE
  CLUS_1                           32                             15
  CLUS_2                           24                             44
  CLUS_3                            1                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(17P11.2) MUTATED       25      8     15      9
  DEL PEAK 37(17P11.2) WILD-TYPE     11      7     28     22
D63V6, multiclass
        clus
vv       DEL PEAK 37(17P11.2) MUTATED DEL PEAK 37(17P11.2) WILD-TYPE
  CLUS_1                           25                             11
  CLUS_2                            8                              7
  CLUS_3                           15                             28
  CLUS_4                            9                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(17P11.2) MUTATED       30     23      4
  DEL PEAK 37(17P11.2) WILD-TYPE     15     41     12
D63V7, multiclass
        clus
vv       DEL PEAK 37(17P11.2) MUTATED DEL PEAK 37(17P11.2) WILD-TYPE
  CLUS_1                           30                             15
  CLUS_2                           23                             41
  CLUS_3                            4                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(17P11.2) MUTATED       27      6     24
  DEL PEAK 37(17P11.2) WILD-TYPE     13      4     51
D63V8, multiclass
        clus
vv       DEL PEAK 37(17P11.2) MUTATED DEL PEAK 37(17P11.2) WILD-TYPE
  CLUS_1                           27                             13
  CLUS_2                            6                              4
  CLUS_3                           24                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(64) Variable = DEL PEAK 38(17Q25.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17Q25.3) MUTATED        8     13      7
  DEL PEAK 38(17Q25.3) WILD-TYPE     34     39     25
D64V1, multiclass
        clus
vv       DEL PEAK 38(17Q25.3) MUTATED DEL PEAK 38(17Q25.3) WILD-TYPE
  CLUS_1                            8                             34
  CLUS_2                           13                             39
  CLUS_3                            7                             25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17Q25.3) MUTATED       11      4     13
  DEL PEAK 38(17Q25.3) WILD-TYPE     30     21     47
D64V2, multiclass
        clus
vv       DEL PEAK 38(17Q25.3) MUTATED DEL PEAK 38(17Q25.3) WILD-TYPE
  CLUS_1                           11                             30
  CLUS_2                            4                             21
  CLUS_3                           13                             47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(17Q25.3) MUTATED        2      6      4      5
  DEL PEAK 38(17Q25.3) WILD-TYPE     13     17      3     20
D64V3, multiclass
        clus
vv       DEL PEAK 38(17Q25.3) MUTATED DEL PEAK 38(17Q25.3) WILD-TYPE
  CLUS_1                            2                             13
  CLUS_2                            6                             17
  CLUS_3                            4                              3
  CLUS_4                            5                             20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(17Q25.3) MUTATED        4      5      6      2
  DEL PEAK 38(17Q25.3) WILD-TYPE     11     15     21      6
D64V4, multiclass
        clus
vv       DEL PEAK 38(17Q25.3) MUTATED DEL PEAK 38(17Q25.3) WILD-TYPE
  CLUS_1                            4                             11
  CLUS_2                            5                             15
  CLUS_3                            6                             21
  CLUS_4                            2                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17Q25.3) MUTATED       11     17      0
  DEL PEAK 38(17Q25.3) WILD-TYPE     36     51     10
D64V5, multiclass
        clus
vv       DEL PEAK 38(17Q25.3) MUTATED DEL PEAK 38(17Q25.3) WILD-TYPE
  CLUS_1                           11                             36
  CLUS_2                           17                             51
  CLUS_3                            0                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(17Q25.3) MUTATED        8      3      8      9
  DEL PEAK 38(17Q25.3) WILD-TYPE     28     12     35     22
D64V6, multiclass
        clus
vv       DEL PEAK 38(17Q25.3) MUTATED DEL PEAK 38(17Q25.3) WILD-TYPE
  CLUS_1                            8                             28
  CLUS_2                            3                             12
  CLUS_3                            8                             35
  CLUS_4                            9                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17Q25.3) MUTATED       10     17      1
  DEL PEAK 38(17Q25.3) WILD-TYPE     35     47     15
D64V7, multiclass
        clus
vv       DEL PEAK 38(17Q25.3) MUTATED DEL PEAK 38(17Q25.3) WILD-TYPE
  CLUS_1                           10                             35
  CLUS_2                           17                             47
  CLUS_3                            1                             15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17Q25.3) MUTATED        8      3     17
  DEL PEAK 38(17Q25.3) WILD-TYPE     32      7     58
D64V8, multiclass
        clus
vv       DEL PEAK 38(17Q25.3) MUTATED DEL PEAK 38(17Q25.3) WILD-TYPE
  CLUS_1                            8                             32
  CLUS_2                            3                              7
  CLUS_3                           17                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(65) Variable = DEL PEAK 39(18Q12.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(18Q12.2) MUTATED       25     26     20
  DEL PEAK 39(18Q12.2) WILD-TYPE     17     26     12
D65V1, multiclass
        clus
vv       DEL PEAK 39(18Q12.2) MUTATED DEL PEAK 39(18Q12.2) WILD-TYPE
  CLUS_1                           25                             17
  CLUS_2                           26                             26
  CLUS_3                           20                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(18Q12.2) MUTATED       29     12     30
  DEL PEAK 39(18Q12.2) WILD-TYPE     12     13     30
D65V2, multiclass
        clus
vv       DEL PEAK 39(18Q12.2) MUTATED DEL PEAK 39(18Q12.2) WILD-TYPE
  CLUS_1                           29                             12
  CLUS_2                           12                             13
  CLUS_3                           30                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(18Q12.2) MUTATED        6     13      3     19
  DEL PEAK 39(18Q12.2) WILD-TYPE      9     10      4      6
D65V3, multiclass
        clus
vv       DEL PEAK 39(18Q12.2) MUTATED DEL PEAK 39(18Q12.2) WILD-TYPE
  CLUS_1                            6                              9
  CLUS_2                           13                             10
  CLUS_3                            3                              4
  CLUS_4                           19                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(18Q12.2) MUTATED        6     11     20      4
  DEL PEAK 39(18Q12.2) WILD-TYPE      9      9      7      4
D65V4, multiclass
        clus
vv       DEL PEAK 39(18Q12.2) MUTATED DEL PEAK 39(18Q12.2) WILD-TYPE
  CLUS_1                            6                              9
  CLUS_2                           11                              9
  CLUS_3                           20                              7
  CLUS_4                            4                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(18Q12.2) MUTATED       32     34      5
  DEL PEAK 39(18Q12.2) WILD-TYPE     15     34      5
D65V5, multiclass
        clus
vv       DEL PEAK 39(18Q12.2) MUTATED DEL PEAK 39(18Q12.2) WILD-TYPE
  CLUS_1                           32                             15
  CLUS_2                           34                             34
  CLUS_3                            5                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(18Q12.2) MUTATED       21     12     25     13
  DEL PEAK 39(18Q12.2) WILD-TYPE     15      3     18     18
D65V6, multiclass
        clus
vv       DEL PEAK 39(18Q12.2) MUTATED DEL PEAK 39(18Q12.2) WILD-TYPE
  CLUS_1                           21                             15
  CLUS_2                           12                              3
  CLUS_3                           25                             18
  CLUS_4                           13                             18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(18Q12.2) MUTATED       30     30     11
  DEL PEAK 39(18Q12.2) WILD-TYPE     15     34      5
D65V7, multiclass
        clus
vv       DEL PEAK 39(18Q12.2) MUTATED DEL PEAK 39(18Q12.2) WILD-TYPE
  CLUS_1                           30                             15
  CLUS_2                           30                             34
  CLUS_3                           11                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(18Q12.2) MUTATED       25      8     38
  DEL PEAK 39(18Q12.2) WILD-TYPE     15      2     37
D65V8, multiclass
        clus
vv       DEL PEAK 39(18Q12.2) MUTATED DEL PEAK 39(18Q12.2) WILD-TYPE
  CLUS_1                           25                             15
  CLUS_2                            8                              2
  CLUS_3                           38                             37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(66) Variable = DEL PEAK 40(18Q21.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18Q21.2) MUTATED       28     30     19
  DEL PEAK 40(18Q21.2) WILD-TYPE     14     22     13
D66V1, multiclass
        clus
vv       DEL PEAK 40(18Q21.2) MUTATED DEL PEAK 40(18Q21.2) WILD-TYPE
  CLUS_1                           28                             14
  CLUS_2                           30                             22
  CLUS_3                           19                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18Q21.2) MUTATED       32     13     32
  DEL PEAK 40(18Q21.2) WILD-TYPE      9     12     28
D66V2, multiclass
        clus
vv       DEL PEAK 40(18Q21.2) MUTATED DEL PEAK 40(18Q21.2) WILD-TYPE
  CLUS_1                           32                              9
  CLUS_2                           13                             12
  CLUS_3                           32                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(18Q21.2) MUTATED        7     14      4     19
  DEL PEAK 40(18Q21.2) WILD-TYPE      8      9      3      6
D66V3, multiclass
        clus
vv       DEL PEAK 40(18Q21.2) MUTATED DEL PEAK 40(18Q21.2) WILD-TYPE
  CLUS_1                            7                              8
  CLUS_2                           14                              9
  CLUS_3                            4                              3
  CLUS_4                           19                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(18Q21.2) MUTATED        7     12     20      5
  DEL PEAK 40(18Q21.2) WILD-TYPE      8      8      7      3
D66V4, multiclass
        clus
vv       DEL PEAK 40(18Q21.2) MUTATED DEL PEAK 40(18Q21.2) WILD-TYPE
  CLUS_1                            7                              8
  CLUS_2                           12                              8
  CLUS_3                           20                              7
  CLUS_4                            5                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18Q21.2) MUTATED       35     37      5
  DEL PEAK 40(18Q21.2) WILD-TYPE     12     31      5
D66V5, multiclass
        clus
vv       DEL PEAK 40(18Q21.2) MUTATED DEL PEAK 40(18Q21.2) WILD-TYPE
  CLUS_1                           35                             12
  CLUS_2                           37                             31
  CLUS_3                            5                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(18Q21.2) MUTATED       24     12     26     15
  DEL PEAK 40(18Q21.2) WILD-TYPE     12      3     17     16
D66V6, multiclass
        clus
vv       DEL PEAK 40(18Q21.2) MUTATED DEL PEAK 40(18Q21.2) WILD-TYPE
  CLUS_1                           24                             12
  CLUS_2                           12                              3
  CLUS_3                           26                             17
  CLUS_4                           15                             16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18Q21.2) MUTATED       33     33     11
  DEL PEAK 40(18Q21.2) WILD-TYPE     12     31      5
D66V7, multiclass
        clus
vv       DEL PEAK 40(18Q21.2) MUTATED DEL PEAK 40(18Q21.2) WILD-TYPE
  CLUS_1                           33                             12
  CLUS_2                           33                             31
  CLUS_3                           11                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18Q21.2) MUTATED       28      8     41
  DEL PEAK 40(18Q21.2) WILD-TYPE     12      2     34
D66V8, multiclass
        clus
vv       DEL PEAK 40(18Q21.2) MUTATED DEL PEAK 40(18Q21.2) WILD-TYPE
  CLUS_1                           28                             12
  CLUS_2                            8                              2
  CLUS_3                           41                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(67) Variable = DEL PEAK 41(19P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(19P13.3) MUTATED       11     27     18
  DEL PEAK 41(19P13.3) WILD-TYPE     31     25     14
D67V1, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           11                             31
  CLUS_2                           27                             25
  CLUS_3                           18                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(19P13.3) MUTATED       18      9     29
  DEL PEAK 41(19P13.3) WILD-TYPE     23     16     31
D67V2, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           18                             23
  CLUS_2                            9                             16
  CLUS_3                           29                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(19P13.3) MUTATED        5     10      4     12
  DEL PEAK 41(19P13.3) WILD-TYPE     10     13      3     13
D67V3, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                            5                             10
  CLUS_2                           10                             13
  CLUS_3                            4                              3
  CLUS_4                           12                             13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(19P13.3) MUTATED        8      7     12      4
  DEL PEAK 41(19P13.3) WILD-TYPE      7     13     15      4
D67V4, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                            8                              7
  CLUS_2                            7                             13
  CLUS_3                           12                             15
  CLUS_4                            4                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(19P13.3) MUTATED       22     33      1
  DEL PEAK 41(19P13.3) WILD-TYPE     25     35      9
D67V5, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           22                             25
  CLUS_2                           33                             35
  CLUS_3                            1                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(19P13.3) MUTATED       19      3     17     17
  DEL PEAK 41(19P13.3) WILD-TYPE     17     12     26     14
D67V6, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           19                             17
  CLUS_2                            3                             12
  CLUS_3                           17                             26
  CLUS_4                           17                             14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(19P13.3) MUTATED       21     32      3
  DEL PEAK 41(19P13.3) WILD-TYPE     24     32     13
D67V7, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           21                             24
  CLUS_2                           32                             32
  CLUS_3                            3                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(19P13.3) MUTATED       20      2     34
  DEL PEAK 41(19P13.3) WILD-TYPE     20      8     41
D67V8, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           20                             20
  CLUS_2                            2                              8
  CLUS_3                           34                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(68) Variable = DEL PEAK 42(19Q13.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(19Q13.31) MUTATED        8     21      7
  DEL PEAK 42(19Q13.31) WILD-TYPE     34     31     25
D68V1, multiclass
        clus
vv       DEL PEAK 42(19Q13.31) MUTATED DEL PEAK 42(19Q13.31) WILD-TYPE
  CLUS_1                             8                              34
  CLUS_2                            21                              31
  CLUS_3                             7                              25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(19Q13.31) MUTATED        7      6     23
  DEL PEAK 42(19Q13.31) WILD-TYPE     34     19     37
D68V2, multiclass
        clus
vv       DEL PEAK 42(19Q13.31) MUTATED DEL PEAK 42(19Q13.31) WILD-TYPE
  CLUS_1                             7                              34
  CLUS_2                             6                              19
  CLUS_3                            23                              37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(19Q13.31) MUTATED        6      9      1      5
  DEL PEAK 42(19Q13.31) WILD-TYPE      9     14      6     20
D68V3, multiclass
        clus
vv       DEL PEAK 42(19Q13.31) MUTATED DEL PEAK 42(19Q13.31) WILD-TYPE
  CLUS_1                             6                               9
  CLUS_2                             9                              14
  CLUS_3                             1                               6
  CLUS_4                             5                              20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(19Q13.31) MUTATED        4      7      5      5
  DEL PEAK 42(19Q13.31) WILD-TYPE     11     13     22      3
D68V4, multiclass
        clus
vv       DEL PEAK 42(19Q13.31) MUTATED DEL PEAK 42(19Q13.31) WILD-TYPE
  CLUS_1                             4                              11
  CLUS_2                             7                              13
  CLUS_3                             5                              22
  CLUS_4                             5                               3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(19Q13.31) MUTATED        8     24      3
  DEL PEAK 42(19Q13.31) WILD-TYPE     39     44      7
D68V5, multiclass
        clus
vv       DEL PEAK 42(19Q13.31) MUTATED DEL PEAK 42(19Q13.31) WILD-TYPE
  CLUS_1                             8                              39
  CLUS_2                            24                              44
  CLUS_3                             3                               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(19Q13.31) MUTATED        6      2     17     10
  DEL PEAK 42(19Q13.31) WILD-TYPE     30     13     26     21
D68V6, multiclass
        clus
vv       DEL PEAK 42(19Q13.31) MUTATED DEL PEAK 42(19Q13.31) WILD-TYPE
  CLUS_1                             6                              30
  CLUS_2                             2                              13
  CLUS_3                            17                              26
  CLUS_4                            10                              21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(19Q13.31) MUTATED        8     23      4
  DEL PEAK 42(19Q13.31) WILD-TYPE     37     41     12
D68V7, multiclass
        clus
vv       DEL PEAK 42(19Q13.31) MUTATED DEL PEAK 42(19Q13.31) WILD-TYPE
  CLUS_1                             8                              37
  CLUS_2                            23                              41
  CLUS_3                             4                              12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(19Q13.31) MUTATED        7      1     27
  DEL PEAK 42(19Q13.31) WILD-TYPE     33      9     48
D68V8, multiclass
        clus
vv       DEL PEAK 42(19Q13.31) MUTATED DEL PEAK 42(19Q13.31) WILD-TYPE
  CLUS_1                             7                              33
  CLUS_2                             1                               9
  CLUS_3                            27                              48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(69) Variable = DEL PEAK 43(20P12.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(20P12.1) MUTATED        8      7      8
  DEL PEAK 43(20P12.1) WILD-TYPE     34     45     24
D69V1, multiclass
        clus
vv       DEL PEAK 43(20P12.1) MUTATED DEL PEAK 43(20P12.1) WILD-TYPE
  CLUS_1                            8                             34
  CLUS_2                            7                             45
  CLUS_3                            8                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(20P12.1) MUTATED        9      5      9
  DEL PEAK 43(20P12.1) WILD-TYPE     32     20     51
D69V2, multiclass
        clus
vv       DEL PEAK 43(20P12.1) MUTATED DEL PEAK 43(20P12.1) WILD-TYPE
  CLUS_1                            9                             32
  CLUS_2                            5                             20
  CLUS_3                            9                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(20P12.1) MUTATED        2      3      0      6
  DEL PEAK 43(20P12.1) WILD-TYPE     13     20      7     19
D69V3, multiclass
        clus
vv       DEL PEAK 43(20P12.1) MUTATED DEL PEAK 43(20P12.1) WILD-TYPE
  CLUS_1                            2                             13
  CLUS_2                            3                             20
  CLUS_3                            0                              7
  CLUS_4                            6                             19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(20P12.1) MUTATED        0      3      6      2
  DEL PEAK 43(20P12.1) WILD-TYPE     15     17     21      6
D69V4, multiclass
        clus
vv       DEL PEAK 43(20P12.1) MUTATED DEL PEAK 43(20P12.1) WILD-TYPE
  CLUS_1                            0                             15
  CLUS_2                            3                             17
  CLUS_3                            6                             21
  CLUS_4                            2                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(20P12.1) MUTATED       12     10      1
  DEL PEAK 43(20P12.1) WILD-TYPE     35     58      9
D69V5, multiclass
        clus
vv       DEL PEAK 43(20P12.1) MUTATED DEL PEAK 43(20P12.1) WILD-TYPE
  CLUS_1                           12                             35
  CLUS_2                           10                             58
  CLUS_3                            1                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(20P12.1) MUTATED       10      3      3      7
  DEL PEAK 43(20P12.1) WILD-TYPE     26     12     40     24
D69V6, multiclass
        clus
vv       DEL PEAK 43(20P12.1) MUTATED DEL PEAK 43(20P12.1) WILD-TYPE
  CLUS_1                           10                             26
  CLUS_2                            3                             12
  CLUS_3                            3                             40
  CLUS_4                            7                             24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(20P12.1) MUTATED       11     10      2
  DEL PEAK 43(20P12.1) WILD-TYPE     34     54     14
D69V7, multiclass
        clus
vv       DEL PEAK 43(20P12.1) MUTATED DEL PEAK 43(20P12.1) WILD-TYPE
  CLUS_1                           11                             34
  CLUS_2                           10                             54
  CLUS_3                            2                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(20P12.1) MUTATED       10      3     10
  DEL PEAK 43(20P12.1) WILD-TYPE     30      7     65
D69V8, multiclass
        clus
vv       DEL PEAK 43(20P12.1) MUTATED DEL PEAK 43(20P12.1) WILD-TYPE
  CLUS_1                           10                             30
  CLUS_2                            3                              7
  CLUS_3                           10                             65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(70) Variable = DEL PEAK 44(21Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(21Q11.2) MUTATED       24     35     16
  DEL PEAK 44(21Q11.2) WILD-TYPE     18     17     16
D70V1, multiclass
        clus
vv       DEL PEAK 44(21Q11.2) MUTATED DEL PEAK 44(21Q11.2) WILD-TYPE
  CLUS_1                           24                             18
  CLUS_2                           35                             17
  CLUS_3                           16                             16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(21Q11.2) MUTATED       30     13     32
  DEL PEAK 44(21Q11.2) WILD-TYPE     11     12     28
D70V2, multiclass
        clus
vv       DEL PEAK 44(21Q11.2) MUTATED DEL PEAK 44(21Q11.2) WILD-TYPE
  CLUS_1                           30                             11
  CLUS_2                           13                             12
  CLUS_3                           32                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(21Q11.2) MUTATED        7     15      5     19
  DEL PEAK 44(21Q11.2) WILD-TYPE      8      8      2      6
D70V3, multiclass
        clus
vv       DEL PEAK 44(21Q11.2) MUTATED DEL PEAK 44(21Q11.2) WILD-TYPE
  CLUS_1                            7                              8
  CLUS_2                           15                              8
  CLUS_3                            5                              2
  CLUS_4                           19                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(21Q11.2) MUTATED       11     12     20      3
  DEL PEAK 44(21Q11.2) WILD-TYPE      4      8      7      5
D70V4, multiclass
        clus
vv       DEL PEAK 44(21Q11.2) MUTATED DEL PEAK 44(21Q11.2) WILD-TYPE
  CLUS_1                           11                              4
  CLUS_2                           12                              8
  CLUS_3                           20                              7
  CLUS_4                            3                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(21Q11.2) MUTATED       33     39      3
  DEL PEAK 44(21Q11.2) WILD-TYPE     14     29      7
D70V5, multiclass
        clus
vv       DEL PEAK 44(21Q11.2) MUTATED DEL PEAK 44(21Q11.2) WILD-TYPE
  CLUS_1                           33                             14
  CLUS_2                           39                             29
  CLUS_3                            3                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(21Q11.2) MUTATED       26      7     27     15
  DEL PEAK 44(21Q11.2) WILD-TYPE     10      8     16     16
D70V6, multiclass
        clus
vv       DEL PEAK 44(21Q11.2) MUTATED DEL PEAK 44(21Q11.2) WILD-TYPE
  CLUS_1                           26                             10
  CLUS_2                            7                              8
  CLUS_3                           27                             16
  CLUS_4                           15                             16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(21Q11.2) MUTATED       32     36      7
  DEL PEAK 44(21Q11.2) WILD-TYPE     13     28      9
D70V7, multiclass
        clus
vv       DEL PEAK 44(21Q11.2) MUTATED DEL PEAK 44(21Q11.2) WILD-TYPE
  CLUS_1                           32                             13
  CLUS_2                           36                             28
  CLUS_3                            7                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(21Q11.2) MUTATED       29      4     42
  DEL PEAK 44(21Q11.2) WILD-TYPE     11      6     33
D70V8, multiclass
        clus
vv       DEL PEAK 44(21Q11.2) MUTATED DEL PEAK 44(21Q11.2) WILD-TYPE
  CLUS_1                           29                             11
  CLUS_2                            4                              6
  CLUS_3                           42                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(71) Variable = DEL PEAK 45(21Q22.12) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(21Q22.12) MUTATED       21     33     19
  DEL PEAK 45(21Q22.12) WILD-TYPE     21     19     13
D71V1, multiclass
        clus
vv       DEL PEAK 45(21Q22.12) MUTATED DEL PEAK 45(21Q22.12) WILD-TYPE
  CLUS_1                            21                              21
  CLUS_2                            33                              19
  CLUS_3                            19                              13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(21Q22.12) MUTATED       31     11     31
  DEL PEAK 45(21Q22.12) WILD-TYPE     10     14     29
D71V2, multiclass
        clus
vv       DEL PEAK 45(21Q22.12) MUTATED DEL PEAK 45(21Q22.12) WILD-TYPE
  CLUS_1                            31                              10
  CLUS_2                            11                              14
  CLUS_3                            31                              29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(21Q22.12) MUTATED        5     11      6     19
  DEL PEAK 45(21Q22.12) WILD-TYPE     10     12      1      6
D71V3, multiclass
        clus
vv       DEL PEAK 45(21Q22.12) MUTATED DEL PEAK 45(21Q22.12) WILD-TYPE
  CLUS_1                             5                              10
  CLUS_2                            11                              12
  CLUS_3                             6                               1
  CLUS_4                            19                               6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(21Q22.12) MUTATED       11      9     20      1
  DEL PEAK 45(21Q22.12) WILD-TYPE      4     11      7      7
D71V4, multiclass
        clus
vv       DEL PEAK 45(21Q22.12) MUTATED DEL PEAK 45(21Q22.12) WILD-TYPE
  CLUS_1                            11                               4
  CLUS_2                             9                              11
  CLUS_3                            20                               7
  CLUS_4                             1                               7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(21Q22.12) MUTATED       34     36      3
  DEL PEAK 45(21Q22.12) WILD-TYPE     13     32      7
D71V5, multiclass
        clus
vv       DEL PEAK 45(21Q22.12) MUTATED DEL PEAK 45(21Q22.12) WILD-TYPE
  CLUS_1                            34                              13
  CLUS_2                            36                              32
  CLUS_3                             3                               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(21Q22.12) MUTATED       26      8     25     14
  DEL PEAK 45(21Q22.12) WILD-TYPE     10      7     18     17
D71V6, multiclass
        clus
vv       DEL PEAK 45(21Q22.12) MUTATED DEL PEAK 45(21Q22.12) WILD-TYPE
  CLUS_1                            26                              10
  CLUS_2                             8                               7
  CLUS_3                            25                              18
  CLUS_4                            14                              17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(21Q22.12) MUTATED       33     35      5
  DEL PEAK 45(21Q22.12) WILD-TYPE     12     29     11
D71V7, multiclass
        clus
vv       DEL PEAK 45(21Q22.12) MUTATED DEL PEAK 45(21Q22.12) WILD-TYPE
  CLUS_1                            33                              12
  CLUS_2                            35                              29
  CLUS_3                             5                              11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(21Q22.12) MUTATED       30      4     39
  DEL PEAK 45(21Q22.12) WILD-TYPE     10      6     36
D71V8, multiclass
        clus
vv       DEL PEAK 45(21Q22.12) MUTATED DEL PEAK 45(21Q22.12) WILD-TYPE
  CLUS_1                            30                              10
  CLUS_2                             4                               6
  CLUS_3                            39                              36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(72) Variable = DEL PEAK 46(22Q11.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(22Q11.1) MUTATED       15     15     20
  DEL PEAK 46(22Q11.1) WILD-TYPE     27     37     12
D72V1, multiclass
        clus
vv       DEL PEAK 46(22Q11.1) MUTATED DEL PEAK 46(22Q11.1) WILD-TYPE
  CLUS_1                           15                             27
  CLUS_2                           15                             37
  CLUS_3                           20                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(22Q11.1) MUTATED       27      8     15
  DEL PEAK 46(22Q11.1) WILD-TYPE     14     17     45
D72V2, multiclass
        clus
vv       DEL PEAK 46(22Q11.1) MUTATED DEL PEAK 46(22Q11.1) WILD-TYPE
  CLUS_1                           27                             14
  CLUS_2                            8                             17
  CLUS_3                           15                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(22Q11.1) MUTATED        3      8      1     16
  DEL PEAK 46(22Q11.1) WILD-TYPE     12     15      6      9
D72V3, multiclass
        clus
vv       DEL PEAK 46(22Q11.1) MUTATED DEL PEAK 46(22Q11.1) WILD-TYPE
  CLUS_1                            3                             12
  CLUS_2                            8                             15
  CLUS_3                            1                              6
  CLUS_4                           16                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(22Q11.1) MUTATED        4      6     16      2
  DEL PEAK 46(22Q11.1) WILD-TYPE     11     14     11      6
D72V4, multiclass
        clus
vv       DEL PEAK 46(22Q11.1) MUTATED DEL PEAK 46(22Q11.1) WILD-TYPE
  CLUS_1                            4                             11
  CLUS_2                            6                             14
  CLUS_3                           16                             11
  CLUS_4                            2                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(22Q11.1) MUTATED       28     21      1
  DEL PEAK 46(22Q11.1) WILD-TYPE     19     47      9
D72V5, multiclass
        clus
vv       DEL PEAK 46(22Q11.1) MUTATED DEL PEAK 46(22Q11.1) WILD-TYPE
  CLUS_1                           28                             19
  CLUS_2                           21                             47
  CLUS_3                            1                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(22Q11.1) MUTATED       22      6     13      9
  DEL PEAK 46(22Q11.1) WILD-TYPE     14      9     30     22
D72V6, multiclass
        clus
vv       DEL PEAK 46(22Q11.1) MUTATED DEL PEAK 46(22Q11.1) WILD-TYPE
  CLUS_1                           22                             14
  CLUS_2                            6                              9
  CLUS_3                           13                             30
  CLUS_4                            9                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(22Q11.1) MUTATED       28     20      2
  DEL PEAK 46(22Q11.1) WILD-TYPE     17     44     14
D72V7, multiclass
        clus
vv       DEL PEAK 46(22Q11.1) MUTATED DEL PEAK 46(22Q11.1) WILD-TYPE
  CLUS_1                           28                             17
  CLUS_2                           20                             44
  CLUS_3                            2                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(22Q11.1) MUTATED       26      2     22
  DEL PEAK 46(22Q11.1) WILD-TYPE     14      8     53
D72V8, multiclass
        clus
vv       DEL PEAK 46(22Q11.1) MUTATED DEL PEAK 46(22Q11.1) WILD-TYPE
  CLUS_1                           26                             14
  CLUS_2                            2                              8
  CLUS_3                           22                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(73) Variable = DEL PEAK 47(XP21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XP21.1) MUTATED       10     28     12
  DEL PEAK 47(XP21.1) WILD-TYPE     32     24     20
D73V1, multiclass
        clus
vv       DEL PEAK 47(XP21.1) MUTATED DEL PEAK 47(XP21.1) WILD-TYPE
  CLUS_1                          10                            32
  CLUS_2                          28                            24
  CLUS_3                          12                            20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XP21.1) MUTATED       14      6     30
  DEL PEAK 47(XP21.1) WILD-TYPE     27     19     30
D73V2, multiclass
        clus
vv       DEL PEAK 47(XP21.1) MUTATED DEL PEAK 47(XP21.1) WILD-TYPE
  CLUS_1                          14                            27
  CLUS_2                           6                            19
  CLUS_3                          30                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(XP21.1) MUTATED        9     12      0     11
  DEL PEAK 47(XP21.1) WILD-TYPE      6     11      7     14
D73V3, multiclass
        clus
vv       DEL PEAK 47(XP21.1) MUTATED DEL PEAK 47(XP21.1) WILD-TYPE
  CLUS_1                           9                             6
  CLUS_2                          12                            11
  CLUS_3                           0                             7
  CLUS_4                          11                            14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(XP21.1) MUTATED        7     12     11      2
  DEL PEAK 47(XP21.1) WILD-TYPE      8      8     16      6
D73V4, multiclass
        clus
vv       DEL PEAK 47(XP21.1) MUTATED DEL PEAK 47(XP21.1) WILD-TYPE
  CLUS_1                           7                             8
  CLUS_2                          12                             8
  CLUS_3                          11                            16
  CLUS_4                           2                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XP21.1) MUTATED       15     33      2
  DEL PEAK 47(XP21.1) WILD-TYPE     32     35      8
D73V5, multiclass
        clus
vv       DEL PEAK 47(XP21.1) MUTATED DEL PEAK 47(XP21.1) WILD-TYPE
  CLUS_1                          15                            32
  CLUS_2                          33                            35
  CLUS_3                           2                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(XP21.1) MUTATED       13      2     22     13
  DEL PEAK 47(XP21.1) WILD-TYPE     23     13     21     18
D73V6, multiclass
        clus
vv       DEL PEAK 47(XP21.1) MUTATED DEL PEAK 47(XP21.1) WILD-TYPE
  CLUS_1                          13                            23
  CLUS_2                           2                            13
  CLUS_3                          22                            21
  CLUS_4                          13                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XP21.1) MUTATED       15     32      3
  DEL PEAK 47(XP21.1) WILD-TYPE     30     32     13
D73V7, multiclass
        clus
vv       DEL PEAK 47(XP21.1) MUTATED DEL PEAK 47(XP21.1) WILD-TYPE
  CLUS_1                          15                            30
  CLUS_2                          32                            32
  CLUS_3                           3                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XP21.1) MUTATED       14      1     35
  DEL PEAK 47(XP21.1) WILD-TYPE     26      9     40
D73V8, multiclass
        clus
vv       DEL PEAK 47(XP21.1) MUTATED DEL PEAK 47(XP21.1) WILD-TYPE
  CLUS_1                          14                            26
  CLUS_2                           1                             9
  CLUS_3                          35                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(74) Variable = DEL PEAK 48(XP11.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(XP11.3) MUTATED       13     29     10
  DEL PEAK 48(XP11.3) WILD-TYPE     29     23     22
D74V1, multiclass
        clus
vv       DEL PEAK 48(XP11.3) MUTATED DEL PEAK 48(XP11.3) WILD-TYPE
  CLUS_1                          13                            29
  CLUS_2                          29                            23
  CLUS_3                          10                            22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(XP11.3) MUTATED       12     10     30
  DEL PEAK 48(XP11.3) WILD-TYPE     29     15     30
D74V2, multiclass
        clus
vv       DEL PEAK 48(XP11.3) MUTATED DEL PEAK 48(XP11.3) WILD-TYPE
  CLUS_1                          12                            29
  CLUS_2                          10                            15
  CLUS_3                          30                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(XP11.3) MUTATED        8     15      1      9
  DEL PEAK 48(XP11.3) WILD-TYPE      7      8      6     16
D74V3, multiclass
        clus
vv       DEL PEAK 48(XP11.3) MUTATED DEL PEAK 48(XP11.3) WILD-TYPE
  CLUS_1                           8                             7
  CLUS_2                          15                             8
  CLUS_3                           1                             6
  CLUS_4                           9                            16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(XP11.3) MUTATED        7     14      9      3
  DEL PEAK 48(XP11.3) WILD-TYPE      8      6     18      5
D74V4, multiclass
        clus
vv       DEL PEAK 48(XP11.3) MUTATED DEL PEAK 48(XP11.3) WILD-TYPE
  CLUS_1                           7                             8
  CLUS_2                          14                             6
  CLUS_3                           9                            18
  CLUS_4                           3                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(XP11.3) MUTATED       12     38      2
  DEL PEAK 48(XP11.3) WILD-TYPE     35     30      8
D74V5, multiclass
        clus
vv       DEL PEAK 48(XP11.3) MUTATED DEL PEAK 48(XP11.3) WILD-TYPE
  CLUS_1                          12                            35
  CLUS_2                          38                            30
  CLUS_3                           2                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(XP11.3) MUTATED       11      1     23     17
  DEL PEAK 48(XP11.3) WILD-TYPE     25     14     20     14
D74V6, multiclass
        clus
vv       DEL PEAK 48(XP11.3) MUTATED DEL PEAK 48(XP11.3) WILD-TYPE
  CLUS_1                          11                            25
  CLUS_2                           1                            14
  CLUS_3                          23                            20
  CLUS_4                          17                            14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(XP11.3) MUTATED       12     36      4
  DEL PEAK 48(XP11.3) WILD-TYPE     33     28     12
D74V7, multiclass
        clus
vv       DEL PEAK 48(XP11.3) MUTATED DEL PEAK 48(XP11.3) WILD-TYPE
  CLUS_1                          12                            33
  CLUS_2                          36                            28
  CLUS_3                           4                            12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(XP11.3) MUTATED       11      1     40
  DEL PEAK 48(XP11.3) WILD-TYPE     29      9     35
D74V8, multiclass
        clus
vv       DEL PEAK 48(XP11.3) MUTATED DEL PEAK 48(XP11.3) WILD-TYPE
  CLUS_1                          11                            29
  CLUS_2                           1                             9
  CLUS_3                          40                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(75) Variable = DEL PEAK 49(XQ21.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(XQ21.33) MUTATED        9      9      8
  DEL PEAK 49(XQ21.33) WILD-TYPE     33     43     24
D75V1, multiclass
        clus
vv       DEL PEAK 49(XQ21.33) MUTATED DEL PEAK 49(XQ21.33) WILD-TYPE
  CLUS_1                            9                             33
  CLUS_2                            9                             43
  CLUS_3                            8                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(XQ21.33) MUTATED       12      4     10
  DEL PEAK 49(XQ21.33) WILD-TYPE     29     21     50
D75V2, multiclass
        clus
vv       DEL PEAK 49(XQ21.33) MUTATED DEL PEAK 49(XQ21.33) WILD-TYPE
  CLUS_1                           12                             29
  CLUS_2                            4                             21
  CLUS_3                           10                             50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(XQ21.33) MUTATED        3      6      0      7
  DEL PEAK 49(XQ21.33) WILD-TYPE     12     17      7     18
D75V3, multiclass
        clus
vv       DEL PEAK 49(XQ21.33) MUTATED DEL PEAK 49(XQ21.33) WILD-TYPE
  CLUS_1                            3                             12
  CLUS_2                            6                             17
  CLUS_3                            0                              7
  CLUS_4                            7                             18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(XQ21.33) MUTATED        1      4      7      4
  DEL PEAK 49(XQ21.33) WILD-TYPE     14     16     20      4
D75V4, multiclass
        clus
vv       DEL PEAK 49(XQ21.33) MUTATED DEL PEAK 49(XQ21.33) WILD-TYPE
  CLUS_1                            1                             14
  CLUS_2                            4                             16
  CLUS_3                            7                             20
  CLUS_4                            4                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(XQ21.33) MUTATED       13     13      0
  DEL PEAK 49(XQ21.33) WILD-TYPE     34     55     10
D75V5, multiclass
        clus
vv       DEL PEAK 49(XQ21.33) MUTATED DEL PEAK 49(XQ21.33) WILD-TYPE
  CLUS_1                           13                             34
  CLUS_2                           13                             55
  CLUS_3                            0                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(XQ21.33) MUTATED       12      1      6      7
  DEL PEAK 49(XQ21.33) WILD-TYPE     24     14     37     24
D75V6, multiclass
        clus
vv       DEL PEAK 49(XQ21.33) MUTATED DEL PEAK 49(XQ21.33) WILD-TYPE
  CLUS_1                           12                             24
  CLUS_2                            1                             14
  CLUS_3                            6                             37
  CLUS_4                            7                             24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(XQ21.33) MUTATED       13     11      2
  DEL PEAK 49(XQ21.33) WILD-TYPE     32     53     14
D75V7, multiclass
        clus
vv       DEL PEAK 49(XQ21.33) MUTATED DEL PEAK 49(XQ21.33) WILD-TYPE
  CLUS_1                           13                             32
  CLUS_2                           11                             53
  CLUS_3                            2                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(XQ21.33) MUTATED       12      1     13
  DEL PEAK 49(XQ21.33) WILD-TYPE     28      9     62
D75V8, multiclass
        clus
vv       DEL PEAK 49(XQ21.33) MUTATED DEL PEAK 49(XQ21.33) WILD-TYPE
  CLUS_1                           12                             28
  CLUS_2                            1                              9
  CLUS_3                           13                             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
