[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"         "-nVNozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"        "-oTHNSC-TP"
[1] "opt"       "-OPMUTSIG"
[1] "tl" ""  
[1] "dx" ""  
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/HNSC-TP/10668120/HNSC-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/HNSC-TP/10013755/transformed.cor.cli.txt"

nPatients in clinical file=528, in cluster file=511, common to both=511
[1]  73 511
[1] "AMP PEAK  1(2Q11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  1(2Q11.2) MUTATED AMP PEAK  1(2Q11.2) WILD-TYPE 
                          104                           407 
  AMP PEAK  1(2Q11.2) MUTATED AMP PEAK  1(2Q11.2) WILD-TYPE 
                          104                           407 
[1] "AMP PEAK  2(2Q31.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  2(2Q31.2) MUTATED AMP PEAK  2(2Q31.2) WILD-TYPE 
                          108                           403 
  AMP PEAK  2(2Q31.2) MUTATED AMP PEAK  2(2Q31.2) WILD-TYPE 
                          108                           403 
[1] "AMP PEAK  3(3Q26.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  3(3Q26.33) MUTATED AMP PEAK  3(3Q26.33) WILD-TYPE 
                           372                            139 
  AMP PEAK  3(3Q26.33) MUTATED AMP PEAK  3(3Q26.33) WILD-TYPE 
                           372                            139 
[1] "AMP PEAK  4(5P15.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  4(5P15.33) MUTATED AMP PEAK  4(5P15.33) WILD-TYPE 
                           231                            280 
  AMP PEAK  4(5P15.33) MUTATED AMP PEAK  4(5P15.33) WILD-TYPE 
                           231                            280 
[1] "AMP PEAK  5(5P12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  5(5P12) MUTATED AMP PEAK  5(5P12) WILD-TYPE 
                        203                         308 
  AMP PEAK  5(5P12) MUTATED AMP PEAK  5(5P12) WILD-TYPE 
                        203                         308 
[1] "AMP PEAK  6(6P12.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  6(6P12.1) MUTATED AMP PEAK  6(6P12.1) WILD-TYPE 
                          107                           404 
  AMP PEAK  6(6P12.1) MUTATED AMP PEAK  6(6P12.1) WILD-TYPE 
                          107                           404 
[1] "AMP PEAK  7(6Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  7(6Q12) MUTATED AMP PEAK  7(6Q12) WILD-TYPE 
                         92                         419 
  AMP PEAK  7(6Q12) MUTATED AMP PEAK  7(6Q12) WILD-TYPE 
                         92                         419 
[1] "AMP PEAK  8(7P11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  8(7P11.2) MUTATED AMP PEAK  8(7P11.2) WILD-TYPE 
                          215                           296 
  AMP PEAK  8(7P11.2) MUTATED AMP PEAK  8(7P11.2) WILD-TYPE 
                          215                           296 
[1] "AMP PEAK  9(7Q21.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  9(7Q21.3) MUTATED AMP PEAK  9(7Q21.3) WILD-TYPE 
                          164                           347 
  AMP PEAK  9(7Q21.3) MUTATED AMP PEAK  9(7Q21.3) WILD-TYPE 
                          164                           347 
[1] "AMP PEAK 10(8P11.23) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 10(8P11.23) MUTATED AMP PEAK 10(8P11.23) WILD-TYPE 
                           156                            355 
  AMP PEAK 10(8P11.23) MUTATED AMP PEAK 10(8P11.23) WILD-TYPE 
                           156                            355 
[1] "AMP PEAK 11(8Q11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 11(8Q11.21) MUTATED AMP PEAK 11(8Q11.21) WILD-TYPE 
                           305                            206 
  AMP PEAK 11(8Q11.21) MUTATED AMP PEAK 11(8Q11.21) WILD-TYPE 
                           305                            206 
[1] "AMP PEAK 12(8Q24.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE 
                           379                            132 
  AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE 
                           379                            132 
[1] "AMP PEAK 13(9P24.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 13(9P24.1) MUTATED AMP PEAK 13(9P24.1) WILD-TYPE 
                          122                           389 
  AMP PEAK 13(9P24.1) MUTATED AMP PEAK 13(9P24.1) WILD-TYPE 
                          122                           389 
[1] "AMP PEAK 14(9P23) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 14(9P23) MUTATED AMP PEAK 14(9P23) WILD-TYPE 
                        121                         390 
  AMP PEAK 14(9P23) MUTATED AMP PEAK 14(9P23) WILD-TYPE 
                        121                         390 
[1] "AMP PEAK 15(9P13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE 
                          135                           376 
  AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE 
                          135                           376 
[1] "AMP PEAK 16(9Q34.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 16(9Q34.3) MUTATED AMP PEAK 16(9Q34.3) WILD-TYPE 
                          174                           337 
  AMP PEAK 16(9Q34.3) MUTATED AMP PEAK 16(9Q34.3) WILD-TYPE 
                          174                           337 
[1] "AMP PEAK 17(11P13) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 17(11P13) MUTATED AMP PEAK 17(11P13) WILD-TYPE 
                         101                          410 
  AMP PEAK 17(11P13) MUTATED AMP PEAK 17(11P13) WILD-TYPE 
                         101                          410 
[1] "AMP PEAK 18(11Q13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE 
                           223                            288 
  AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE 
                           223                            288 
[1] "AMP PEAK 19(12P13.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE 
                            162                             349 
  AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE 
                            162                             349 
[1] "AMP PEAK 20(12Q15) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE 
                         101                          410 
  AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE 
                         101                          410 
[1] "AMP PEAK 21(13Q22.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 21(13Q22.1) MUTATED AMP PEAK 21(13Q22.1) WILD-TYPE 
                           104                            407 
  AMP PEAK 21(13Q22.1) MUTATED AMP PEAK 21(13Q22.1) WILD-TYPE 
                           104                            407 
[1] "AMP PEAK 22(13Q34) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 22(13Q34) MUTATED AMP PEAK 22(13Q34) WILD-TYPE 
                         106                          405 
  AMP PEAK 22(13Q34) MUTATED AMP PEAK 22(13Q34) WILD-TYPE 
                         106                          405 
[1] "AMP PEAK 23(15Q26.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE 
                           102                            409 
  AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE 
                           102                            409 
[1] "AMP PEAK 24(17Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE 
                          88                          423 
  AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE 
                          88                          423 
[1] "AMP PEAK 25(18P11.31) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 25(18P11.31) MUTATED AMP PEAK 25(18P11.31) WILD-TYPE 
                            152                             359 
  AMP PEAK 25(18P11.31) MUTATED AMP PEAK 25(18P11.31) WILD-TYPE 
                            152                             359 
[1] "AMP PEAK 26(18Q11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE 
                           101                            410 
  AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE 
                           101                            410 
[1] "AMP PEAK 27(20P12.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE 
                           189                            322 
  AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE 
                           189                            322 
[1] "AMP PEAK 28(20Q11.22) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 28(20Q11.22) MUTATED AMP PEAK 28(20Q11.22) WILD-TYPE 
                            224                             287 
  AMP PEAK 28(20Q11.22) MUTATED AMP PEAK 28(20Q11.22) WILD-TYPE 
                            224                             287 
[1] "AMP PEAK 29(XQ28) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 29(XQ28) MUTATED AMP PEAK 29(XQ28) WILD-TYPE 
                        145                         366 
  AMP PEAK 29(XQ28) MUTATED AMP PEAK 29(XQ28) WILD-TYPE 
                        145                         366 
[1] "DEL PEAK  1(1P36.21) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE 
                            94                            417 
  DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE 
                            94                            417 
[1] "DEL PEAK  2(1P13.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE 
                          127                           384 
  DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE 
                          127                           384 
[1] "DEL PEAK  3(1Q44) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE 
                         47                         464 
  DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE 
                         47                         464 
[1] "DEL PEAK  4(2Q21.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  4(2Q21.2) MUTATED DEL PEAK  4(2Q21.2) WILD-TYPE 
                           73                           438 
  DEL PEAK  4(2Q21.2) MUTATED DEL PEAK  4(2Q21.2) WILD-TYPE 
                           73                           438 
[1] "DEL PEAK  5(2Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE 
                          114                           397 
  DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE 
                          114                           397 
[1] "DEL PEAK  6(2Q36.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  6(2Q36.2) MUTATED DEL PEAK  6(2Q36.2) WILD-TYPE 
                          152                           359 
  DEL PEAK  6(2Q36.2) MUTATED DEL PEAK  6(2Q36.2) WILD-TYPE 
                          152                           359 
[1] "DEL PEAK  7(3P24.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  7(3P24.1) MUTATED DEL PEAK  7(3P24.1) WILD-TYPE 
                          357                           154 
  DEL PEAK  7(3P24.1) MUTATED DEL PEAK  7(3P24.1) WILD-TYPE 
                          357                           154 
[1] "DEL PEAK  8(3P12.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE 
                          332                           179 
  DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE 
                          332                           179 
[1] "DEL PEAK  9(4P15.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE 
                          201                           310 
  DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE 
                          201                           310 
[1] "DEL PEAK 10(4Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE 
                          164                           347 
  DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE 
                          164                           347 
[1] "DEL PEAK 11(4Q35.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 11(4Q35.2) MUTATED DEL PEAK 11(4Q35.2) WILD-TYPE 
                          206                           305 
  DEL PEAK 11(4Q35.2) MUTATED DEL PEAK 11(4Q35.2) WILD-TYPE 
                          206                           305 
[1] "DEL PEAK 12(5Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE 
                          209                           302 
  DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE 
                          209                           302 
[1] "DEL PEAK 13(5Q15) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 13(5Q15) MUTATED DEL PEAK 13(5Q15) WILD-TYPE 
                        219                         292 
  DEL PEAK 13(5Q15) MUTATED DEL PEAK 13(5Q15) WILD-TYPE 
                        219                         292 
[1] "DEL PEAK 14(5Q35.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 14(5Q35.3) MUTATED DEL PEAK 14(5Q35.3) WILD-TYPE 
                          195                           316 
  DEL PEAK 14(5Q35.3) MUTATED DEL PEAK 14(5Q35.3) WILD-TYPE 
                          195                           316 
[1] "DEL PEAK 15(6P25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE 
                           93                           418 
  DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE 
                           93                           418 
[1] "DEL PEAK 16(7Q31.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 16(7Q31.1) MUTATED DEL PEAK 16(7Q31.1) WILD-TYPE 
                           74                           437 
  DEL PEAK 16(7Q31.1) MUTATED DEL PEAK 16(7Q31.1) WILD-TYPE 
                           74                           437 
[1] "DEL PEAK 17(7Q36.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 17(7Q36.1) MUTATED DEL PEAK 17(7Q36.1) WILD-TYPE 
                          127                           384 
  DEL PEAK 17(7Q36.1) MUTATED DEL PEAK 17(7Q36.1) WILD-TYPE 
                          127                           384 
[1] "DEL PEAK 18(8P23.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE 
                          294                           217 
  DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE 
                          294                           217 
[1] "DEL PEAK 19(9P23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE 
                        233                         278 
  DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE 
                        233                         278 
[1] "DEL PEAK 20(9P21.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE 
                          292                           219 
  DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE 
                          292                           219 
[1] "DEL PEAK 21(9Q21.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE 
                           103                            408 
  DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE 
                           103                            408 
[1] "DEL PEAK 22(9Q34.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 22(9Q34.3) MUTATED DEL PEAK 22(9Q34.3) WILD-TYPE 
                           76                           435 
  DEL PEAK 22(9Q34.3) MUTATED DEL PEAK 22(9Q34.3) WILD-TYPE 
                           76                           435 
[1] "DEL PEAK 23(10P15.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE 
                           165                            346 
  DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE 
                           165                            346 
[1] "DEL PEAK 24(10P11.21) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 24(10P11.21) MUTATED DEL PEAK 24(10P11.21) WILD-TYPE 
                            152                             359 
  DEL PEAK 24(10P11.21) MUTATED DEL PEAK 24(10P11.21) WILD-TYPE 
                            152                             359 
[1] "DEL PEAK 25(10Q23.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE 
                            134                             377 
  DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE 
                            134                             377 
[1] "DEL PEAK 26(11P15.5) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE 
                           156                            355 
  DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE 
                           156                            355 
[1] "DEL PEAK 27(11Q23.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 27(11Q23.1) MUTATED DEL PEAK 27(11Q23.1) WILD-TYPE 
                           239                            272 
  DEL PEAK 27(11Q23.1) MUTATED DEL PEAK 27(11Q23.1) WILD-TYPE 
                           239                            272 
[1] "DEL PEAK 28(12Q24.33) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE 
                             60                             451 
  DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE 
                             60                             451 
[1] "DEL PEAK 29(13Q12.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE 
                            224                             287 
  DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE 
                            224                             287 
[1] "DEL PEAK 30(13Q14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE 
                           209                            302 
  DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE 
                           209                            302 
[1] "DEL PEAK 31(14Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE 
                            72                            439 
  DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE 
                            72                            439 
[1] "DEL PEAK 32(14Q32.32) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 32(14Q32.32) MUTATED DEL PEAK 32(14Q32.32) WILD-TYPE 
                             73                             438 
  DEL PEAK 32(14Q32.32) MUTATED DEL PEAK 32(14Q32.32) WILD-TYPE 
                             73                             438 
[1] "DEL PEAK 33(15Q15.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 33(15Q15.1) MUTATED DEL PEAK 33(15Q15.1) WILD-TYPE 
                           119                            392 
  DEL PEAK 33(15Q15.1) MUTATED DEL PEAK 33(15Q15.1) WILD-TYPE 
                           119                            392 
[1] "DEL PEAK 34(16Q23.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 34(16Q23.3) MUTATED DEL PEAK 34(16Q23.3) WILD-TYPE 
                           102                            409 
  DEL PEAK 34(16Q23.3) MUTATED DEL PEAK 34(16Q23.3) WILD-TYPE 
                           102                            409 
[1] "DEL PEAK 35(17Q25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 35(17Q25.3) MUTATED DEL PEAK 35(17Q25.3) WILD-TYPE 
                            68                            443 
  DEL PEAK 35(17Q25.3) MUTATED DEL PEAK 35(17Q25.3) WILD-TYPE 
                            68                            443 
[1] "DEL PEAK 36(18Q21.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 36(18Q21.2) MUTATED DEL PEAK 36(18Q21.2) WILD-TYPE 
                           259                            252 
  DEL PEAK 36(18Q21.2) MUTATED DEL PEAK 36(18Q21.2) WILD-TYPE 
                           259                            252 
[1] "DEL PEAK 37(18Q23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 37(18Q23) MUTATED DEL PEAK 37(18Q23) WILD-TYPE 
                         278                          233 
  DEL PEAK 37(18Q23) MUTATED DEL PEAK 37(18Q23) WILD-TYPE 
                         278                          233 
[1] "DEL PEAK 38(19P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 38(19P13.3) MUTATED DEL PEAK 38(19P13.3) WILD-TYPE 
                           165                            346 
  DEL PEAK 38(19P13.3) MUTATED DEL PEAK 38(19P13.3) WILD-TYPE 
                           165                            346 
[1] "DEL PEAK 39(19Q13.43) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 39(19Q13.43) MUTATED DEL PEAK 39(19Q13.43) WILD-TYPE 
                             94                             417 
  DEL PEAK 39(19Q13.43) MUTATED DEL PEAK 39(19Q13.43) WILD-TYPE 
                             94                             417 
[1] "DEL PEAK 40(21Q22.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 40(21Q22.3) MUTATED DEL PEAK 40(21Q22.3) WILD-TYPE 
                           195                            316 
  DEL PEAK 40(21Q22.3) MUTATED DEL PEAK 40(21Q22.3) WILD-TYPE 
                           195                            316 
[1] "DEL PEAK 41(22Q13.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 41(22Q13.31) MUTATED DEL PEAK 41(22Q13.31) WILD-TYPE 
                             84                             427 
  DEL PEAK 41(22Q13.31) MUTATED DEL PEAK 41(22Q13.31) WILD-TYPE 
                             84                             427 
[1] "DEL PEAK 42(XP22.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 42(XP22.2) MUTATED DEL PEAK 42(XP22.2) WILD-TYPE 
                          152                           359 
  DEL PEAK 42(XP22.2) MUTATED DEL PEAK 42(XP22.2) WILD-TYPE 
                          152                           359 
[1] "DEL PEAK 43(XP21.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 43(XP21.3) MUTATED DEL PEAK 43(XP21.3) WILD-TYPE 
                          154                           357 
  DEL PEAK 43(XP21.3) MUTATED DEL PEAK 43(XP21.3) WILD-TYPE 
                          154                           357 
[1] "DEL PEAK 44(XQ21.33) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 44(XQ21.33) MUTATED DEL PEAK 44(XQ21.33) WILD-TYPE 
                            74                            437 
  DEL PEAK 44(XQ21.33) MUTATED DEL PEAK 44(XQ21.33) WILD-TYPE 
                            74                            437 
[1] "terrence_modification_tag"
[1] TRUE
[1] "data2feature, selection=ALL"
 [1] "CN_CNMF"                     "METHLYATION_CNMF"           
 [3] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [5] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [7] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
 [9] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 10 rows and 511 columns.

Variable 1:'CN_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=7,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'RPPA_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'RPPA_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MRNASEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MIRSEQ_MATURE_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
 [1] "CN_CNMF"                     "METHLYATION_CNMF"           
 [3] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [5] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [7] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
 [9] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 511 columns, 0 survival variables, and 10 non-survival variables.
CN_CNMF, nv=4, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=7, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=4, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=5, binary=FALSE, numeric=FALSE

Clustering(1) Variable = AMP PEAK  1(2Q11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(2Q11.2) MUTATED       54     35     12      3
  AMP PEAK  1(2Q11.2) WILD-TYPE    124     67    177     39
D1V1, multiclass
        clus
vv       AMP PEAK  1(2Q11.2) MUTATED AMP PEAK  1(2Q11.2) WILD-TYPE
  CLUS_1                          54                           124
  CLUS_2                          35                            67
  CLUS_3                          12                           177
  CLUS_4                           3                            39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  1(2Q11.2) MUTATED        6     31     20     37      2      4
  AMP PEAK  1(2Q11.2) WILD-TYPE     76     45     76     50     76     70
                               vv
clus                            CLUS_7
  AMP PEAK  1(2Q11.2) MUTATED        4
  AMP PEAK  1(2Q11.2) WILD-TYPE     14
D1V2, multiclass
        clus
vv       AMP PEAK  1(2Q11.2) MUTATED AMP PEAK  1(2Q11.2) WILD-TYPE
  CLUS_1                           6                            76
  CLUS_2                          31                            45
  CLUS_3                          20                            76
  CLUS_4                          37                            50
  CLUS_5                           2                            76
  CLUS_6                           4                            70
  CLUS_7                           4                            14
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(2Q11.2) MUTATED       12     17      9     14
  AMP PEAK  1(2Q11.2) WILD-TYPE     41     34     28     51
D1V3, multiclass
        clus
vv       AMP PEAK  1(2Q11.2) MUTATED AMP PEAK  1(2Q11.2) WILD-TYPE
  CLUS_1                          12                            41
  CLUS_2                          17                            34
  CLUS_3                           9                            28
  CLUS_4                          14                            51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(2Q11.2) MUTATED       16     22     14
  AMP PEAK  1(2Q11.2) WILD-TYPE     60     60     34
D1V4, multiclass
        clus
vv       AMP PEAK  1(2Q11.2) MUTATED AMP PEAK  1(2Q11.2) WILD-TYPE
  CLUS_1                          16                            60
  CLUS_2                          22                            60
  CLUS_3                          14                            34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(2Q11.2) MUTATED       53     26     23
  AMP PEAK  1(2Q11.2) WILD-TYPE    154    108    129
D1V5, multiclass
        clus
vv       AMP PEAK  1(2Q11.2) MUTATED AMP PEAK  1(2Q11.2) WILD-TYPE
  CLUS_1                          53                           154
  CLUS_2                          26                           108
  CLUS_3                          23                           129
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(2Q11.2) MUTATED       23     29     24     26
  AMP PEAK  1(2Q11.2) WILD-TYPE     28    128    131    104
D1V6, multiclass
        clus
vv       AMP PEAK  1(2Q11.2) MUTATED AMP PEAK  1(2Q11.2) WILD-TYPE
  CLUS_1                          23                            28
  CLUS_2                          29                           128
  CLUS_3                          24                           131
  CLUS_4                          26                           104
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(2Q11.2) MUTATED       23     54     25
  AMP PEAK  1(2Q11.2) WILD-TYPE    122    162    121
D1V7, multiclass
        clus
vv       AMP PEAK  1(2Q11.2) MUTATED AMP PEAK  1(2Q11.2) WILD-TYPE
  CLUS_1                          23                           122
  CLUS_2                          54                           162
  CLUS_3                          25                           121
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(2Q11.2) MUTATED       37     39     26
  AMP PEAK  1(2Q11.2) WILD-TYPE    161     85    159
D1V8, multiclass
        clus
vv       AMP PEAK  1(2Q11.2) MUTATED AMP PEAK  1(2Q11.2) WILD-TYPE
  CLUS_1                          37                           161
  CLUS_2                          39                            85
  CLUS_3                          26                           159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(2Q11.2) MUTATED       27     37     31
  AMP PEAK  1(2Q11.2) WILD-TYPE    147    122    107
D1V9, multiclass
        clus
vv       AMP PEAK  1(2Q11.2) MUTATED AMP PEAK  1(2Q11.2) WILD-TYPE
  CLUS_1                          27                           147
  CLUS_2                          37                           122
  CLUS_3                          31                           107
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  1(2Q11.2) MUTATED       18     43      3     23      8
  AMP PEAK  1(2Q11.2) WILD-TYPE     81     85     76     85     49
D1V10, multiclass
        clus
vv       AMP PEAK  1(2Q11.2) MUTATED AMP PEAK  1(2Q11.2) WILD-TYPE
  CLUS_1                          18                            81
  CLUS_2                          43                            85
  CLUS_3                           3                            76
  CLUS_4                          23                            85
  CLUS_5                           8                            49
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(2) Variable = AMP PEAK  2(2Q31.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(2Q31.2) MUTATED       55     40     10      3
  AMP PEAK  2(2Q31.2) WILD-TYPE    123     62    179     39
D2V1, multiclass
        clus
vv       AMP PEAK  2(2Q31.2) MUTATED AMP PEAK  2(2Q31.2) WILD-TYPE
  CLUS_1                          55                           123
  CLUS_2                          40                            62
  CLUS_3                          10                           179
  CLUS_4                           3                            39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  2(2Q31.2) MUTATED        8     25     18     46      5      3
  AMP PEAK  2(2Q31.2) WILD-TYPE     74     51     78     41     73     71
                               vv
clus                            CLUS_7
  AMP PEAK  2(2Q31.2) MUTATED        3
  AMP PEAK  2(2Q31.2) WILD-TYPE     15
D2V2, multiclass
        clus
vv       AMP PEAK  2(2Q31.2) MUTATED AMP PEAK  2(2Q31.2) WILD-TYPE
  CLUS_1                           8                            74
  CLUS_2                          25                            51
  CLUS_3                          18                            78
  CLUS_4                          46                            41
  CLUS_5                           5                            73
  CLUS_6                           3                            71
  CLUS_7                           3                            15
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(2Q31.2) MUTATED       11     19      9     15
  AMP PEAK  2(2Q31.2) WILD-TYPE     42     32     28     50
D2V3, multiclass
        clus
vv       AMP PEAK  2(2Q31.2) MUTATED AMP PEAK  2(2Q31.2) WILD-TYPE
  CLUS_1                          11                            42
  CLUS_2                          19                            32
  CLUS_3                           9                            28
  CLUS_4                          15                            50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2Q31.2) MUTATED       16     26     12
  AMP PEAK  2(2Q31.2) WILD-TYPE     60     56     36
D2V4, multiclass
        clus
vv       AMP PEAK  2(2Q31.2) MUTATED AMP PEAK  2(2Q31.2) WILD-TYPE
  CLUS_1                          16                            60
  CLUS_2                          26                            56
  CLUS_3                          12                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2Q31.2) MUTATED       52     29     26
  AMP PEAK  2(2Q31.2) WILD-TYPE    155    105    126
D2V5, multiclass
        clus
vv       AMP PEAK  2(2Q31.2) MUTATED AMP PEAK  2(2Q31.2) WILD-TYPE
  CLUS_1                          52                           155
  CLUS_2                          29                           105
  CLUS_3                          26                           126
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(2Q31.2) MUTATED       18     33     23     33
  AMP PEAK  2(2Q31.2) WILD-TYPE     33    124    132     97
D2V6, multiclass
        clus
vv       AMP PEAK  2(2Q31.2) MUTATED AMP PEAK  2(2Q31.2) WILD-TYPE
  CLUS_1                          18                            33
  CLUS_2                          33                           124
  CLUS_3                          23                           132
  CLUS_4                          33                            97
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2Q31.2) MUTATED       23     51     32
  AMP PEAK  2(2Q31.2) WILD-TYPE    122    165    114
D2V7, multiclass
        clus
vv       AMP PEAK  2(2Q31.2) MUTATED AMP PEAK  2(2Q31.2) WILD-TYPE
  CLUS_1                          23                           122
  CLUS_2                          51                           165
  CLUS_3                          32                           114
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2Q31.2) MUTATED       42     37     27
  AMP PEAK  2(2Q31.2) WILD-TYPE    156     87    158
D2V8, multiclass
        clus
vv       AMP PEAK  2(2Q31.2) MUTATED AMP PEAK  2(2Q31.2) WILD-TYPE
  CLUS_1                          42                           156
  CLUS_2                          37                            87
  CLUS_3                          27                           158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2Q31.2) MUTATED       34     32     36
  AMP PEAK  2(2Q31.2) WILD-TYPE    140    127    102
D2V9, multiclass
        clus
vv       AMP PEAK  2(2Q31.2) MUTATED AMP PEAK  2(2Q31.2) WILD-TYPE
  CLUS_1                          34                           140
  CLUS_2                          32                           127
  CLUS_3                          36                           102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  2(2Q31.2) MUTATED       21     42      3     27      9
  AMP PEAK  2(2Q31.2) WILD-TYPE     78     86     76     81     48
D2V10, multiclass
        clus
vv       AMP PEAK  2(2Q31.2) MUTATED AMP PEAK  2(2Q31.2) WILD-TYPE
  CLUS_1                          21                            78
  CLUS_2                          42                            86
  CLUS_3                           3                            76
  CLUS_4                          27                            81
  CLUS_5                           9                            48
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(3) Variable = AMP PEAK  3(3Q26.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(3Q26.33) MUTATED      149     97     96     30
  AMP PEAK  3(3Q26.33) WILD-TYPE     29      5     93     12
D3V1, multiclass
        clus
vv       AMP PEAK  3(3Q26.33) MUTATED AMP PEAK  3(3Q26.33) WILD-TYPE
  CLUS_1                          149                             29
  CLUS_2                           97                              5
  CLUS_3                           96                             93
  CLUS_4                           30                             12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  3(3Q26.33) MUTATED       49     63     77     81     62     27
  AMP PEAK  3(3Q26.33) WILD-TYPE     33     13     19      6     16     47
                                vv
clus                             CLUS_7
  AMP PEAK  3(3Q26.33) MUTATED       13
  AMP PEAK  3(3Q26.33) WILD-TYPE      5
D3V2, multiclass
        clus
vv       AMP PEAK  3(3Q26.33) MUTATED AMP PEAK  3(3Q26.33) WILD-TYPE
  CLUS_1                           49                             33
  CLUS_2                           63                             13
  CLUS_3                           77                             19
  CLUS_4                           81                              6
  CLUS_5                           62                             16
  CLUS_6                           27                             47
  CLUS_7                           13                              5
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(3Q26.33) MUTATED       38     44     25     46
  AMP PEAK  3(3Q26.33) WILD-TYPE     15      7     12     19
D3V3, multiclass
        clus
vv       AMP PEAK  3(3Q26.33) MUTATED AMP PEAK  3(3Q26.33) WILD-TYPE
  CLUS_1                           38                             15
  CLUS_2                           44                              7
  CLUS_3                           25                             12
  CLUS_4                           46                             19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(3Q26.33) MUTATED       52     65     36
  AMP PEAK  3(3Q26.33) WILD-TYPE     24     17     12
D3V4, multiclass
        clus
vv       AMP PEAK  3(3Q26.33) MUTATED AMP PEAK  3(3Q26.33) WILD-TYPE
  CLUS_1                           52                             24
  CLUS_2                           65                             17
  CLUS_3                           36                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(3Q26.33) MUTATED      174    101     88
  AMP PEAK  3(3Q26.33) WILD-TYPE     33     33     64
D3V5, multiclass
        clus
vv       AMP PEAK  3(3Q26.33) MUTATED AMP PEAK  3(3Q26.33) WILD-TYPE
  CLUS_1                          174                             33
  CLUS_2                          101                             33
  CLUS_3                           88                             64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(3Q26.33) MUTATED       41    118     94    110
  AMP PEAK  3(3Q26.33) WILD-TYPE     10     39     61     20
D3V6, multiclass
        clus
vv       AMP PEAK  3(3Q26.33) MUTATED AMP PEAK  3(3Q26.33) WILD-TYPE
  CLUS_1                           41                             10
  CLUS_2                          118                             39
  CLUS_3                           94                             61
  CLUS_4                          110                             20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(3Q26.33) MUTATED       90    176    102
  AMP PEAK  3(3Q26.33) WILD-TYPE     55     40     44
D3V7, multiclass
        clus
vv       AMP PEAK  3(3Q26.33) MUTATED AMP PEAK  3(3Q26.33) WILD-TYPE
  CLUS_1                           90                             55
  CLUS_2                          176                             40
  CLUS_3                          102                             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(3Q26.33) MUTATED      147     95    126
  AMP PEAK  3(3Q26.33) WILD-TYPE     51     29     59
D3V8, multiclass
        clus
vv       AMP PEAK  3(3Q26.33) MUTATED AMP PEAK  3(3Q26.33) WILD-TYPE
  CLUS_1                          147                             51
  CLUS_2                           95                             29
  CLUS_3                          126                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(3Q26.33) MUTATED      113    123    100
  AMP PEAK  3(3Q26.33) WILD-TYPE     61     36     38
D3V9, multiclass
        clus
vv       AMP PEAK  3(3Q26.33) MUTATED AMP PEAK  3(3Q26.33) WILD-TYPE
  CLUS_1                          113                             61
  CLUS_2                          123                             36
  CLUS_3                          100                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  3(3Q26.33) MUTATED       58    109     48     82     39
  AMP PEAK  3(3Q26.33) WILD-TYPE     41     19     31     26     18
D3V10, multiclass
        clus
vv       AMP PEAK  3(3Q26.33) MUTATED AMP PEAK  3(3Q26.33) WILD-TYPE
  CLUS_1                           58                             41
  CLUS_2                          109                             19
  CLUS_3                           48                             31
  CLUS_4                           82                             26
  CLUS_5                           39                             18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(4) Variable = AMP PEAK  4(5P15.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(5P15.33) MUTATED      111     66     39     15
  AMP PEAK  4(5P15.33) WILD-TYPE     67     36    150     27
D4V1, multiclass
        clus
vv       AMP PEAK  4(5P15.33) MUTATED AMP PEAK  4(5P15.33) WILD-TYPE
  CLUS_1                          111                             67
  CLUS_2                           66                             36
  CLUS_3                           39                            150
  CLUS_4                           15                             27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  4(5P15.33) MUTATED       27     42     54     49     35     14
  AMP PEAK  4(5P15.33) WILD-TYPE     55     34     42     38     43     60
                                vv
clus                             CLUS_7
  AMP PEAK  4(5P15.33) MUTATED       10
  AMP PEAK  4(5P15.33) WILD-TYPE      8
D4V2, multiclass
        clus
vv       AMP PEAK  4(5P15.33) MUTATED AMP PEAK  4(5P15.33) WILD-TYPE
  CLUS_1                           27                             55
  CLUS_2                           42                             34
  CLUS_3                           54                             42
  CLUS_4                           49                             38
  CLUS_5                           35                             43
  CLUS_6                           14                             60
  CLUS_7                           10                              8
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(5P15.33) MUTATED       23     23     14     25
  AMP PEAK  4(5P15.33) WILD-TYPE     30     28     23     40
D4V3, multiclass
        clus
vv       AMP PEAK  4(5P15.33) MUTATED AMP PEAK  4(5P15.33) WILD-TYPE
  CLUS_1                           23                             30
  CLUS_2                           23                             28
  CLUS_3                           14                             23
  CLUS_4                           25                             40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(5P15.33) MUTATED       30     36     19
  AMP PEAK  4(5P15.33) WILD-TYPE     46     46     29
D4V4, multiclass
        clus
vv       AMP PEAK  4(5P15.33) MUTATED AMP PEAK  4(5P15.33) WILD-TYPE
  CLUS_1                           30                             46
  CLUS_2                           36                             46
  CLUS_3                           19                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(5P15.33) MUTATED       99     67     60
  AMP PEAK  4(5P15.33) WILD-TYPE    108     67     92
D4V5, multiclass
        clus
vv       AMP PEAK  4(5P15.33) MUTATED AMP PEAK  4(5P15.33) WILD-TYPE
  CLUS_1                           99                            108
  CLUS_2                           67                             67
  CLUS_3                           60                             92
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(5P15.33) MUTATED       28     73     61     64
  AMP PEAK  4(5P15.33) WILD-TYPE     23     84     94     66
D4V6, multiclass
        clus
vv       AMP PEAK  4(5P15.33) MUTATED AMP PEAK  4(5P15.33) WILD-TYPE
  CLUS_1                           28                             23
  CLUS_2                           73                             84
  CLUS_3                           61                             94
  CLUS_4                           64                             66
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(5P15.33) MUTATED       63     95     70
  AMP PEAK  4(5P15.33) WILD-TYPE     82    121     76
D4V7, multiclass
        clus
vv       AMP PEAK  4(5P15.33) MUTATED AMP PEAK  4(5P15.33) WILD-TYPE
  CLUS_1                           63                             82
  CLUS_2                           95                            121
  CLUS_3                           70                             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(5P15.33) MUTATED       90     65     73
  AMP PEAK  4(5P15.33) WILD-TYPE    108     59    112
D4V8, multiclass
        clus
vv       AMP PEAK  4(5P15.33) MUTATED AMP PEAK  4(5P15.33) WILD-TYPE
  CLUS_1                           90                            108
  CLUS_2                           65                             59
  CLUS_3                           73                            112
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(5P15.33) MUTATED       77     70     63
  AMP PEAK  4(5P15.33) WILD-TYPE     97     89     75
D4V9, multiclass
        clus
vv       AMP PEAK  4(5P15.33) MUTATED AMP PEAK  4(5P15.33) WILD-TYPE
  CLUS_1                           77                             97
  CLUS_2                           70                             89
  CLUS_3                           63                             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  4(5P15.33) MUTATED       42     61     32     51     24
  AMP PEAK  4(5P15.33) WILD-TYPE     57     67     47     57     33
D4V10, multiclass
        clus
vv       AMP PEAK  4(5P15.33) MUTATED AMP PEAK  4(5P15.33) WILD-TYPE
  CLUS_1                           42                             57
  CLUS_2                           61                             67
  CLUS_3                           32                             47
  CLUS_4                           51                             57
  CLUS_5                           24                             33
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(5) Variable = AMP PEAK  5(5P12) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(5P12) MUTATED       97     58     33     15
  AMP PEAK  5(5P12) WILD-TYPE     81     44    156     27
D5V1, multiclass
        clus
vv       AMP PEAK  5(5P12) MUTATED AMP PEAK  5(5P12) WILD-TYPE
  CLUS_1                        97                          81
  CLUS_2                        58                          44
  CLUS_3                        33                         156
  CLUS_4                        15                          27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK  5(5P12) MUTATED       21     38     48     43     28     15     10
  AMP PEAK  5(5P12) WILD-TYPE     61     38     48     44     50     59      8
D5V2, multiclass
        clus
vv       AMP PEAK  5(5P12) MUTATED AMP PEAK  5(5P12) WILD-TYPE
  CLUS_1                        21                          61
  CLUS_2                        38                          38
  CLUS_3                        48                          48
  CLUS_4                        43                          44
  CLUS_5                        28                          50
  CLUS_6                        15                          59
  CLUS_7                        10                           8
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(5P12) MUTATED       17     23     13     24
  AMP PEAK  5(5P12) WILD-TYPE     36     28     24     41
D5V3, multiclass
        clus
vv       AMP PEAK  5(5P12) MUTATED AMP PEAK  5(5P12) WILD-TYPE
  CLUS_1                        17                          36
  CLUS_2                        23                          28
  CLUS_3                        13                          24
  CLUS_4                        24                          41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(5P12) MUTATED       24     30     23
  AMP PEAK  5(5P12) WILD-TYPE     52     52     25
D5V4, multiclass
        clus
vv       AMP PEAK  5(5P12) MUTATED AMP PEAK  5(5P12) WILD-TYPE
  CLUS_1                        24                          52
  CLUS_2                        30                          52
  CLUS_3                        23                          25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(5P12) MUTATED       88     58     54
  AMP PEAK  5(5P12) WILD-TYPE    119     76     98
D5V5, multiclass
        clus
vv       AMP PEAK  5(5P12) MUTATED AMP PEAK  5(5P12) WILD-TYPE
  CLUS_1                        88                         119
  CLUS_2                        58                          76
  CLUS_3                        54                          98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(5P12) MUTATED       28     65     55     52
  AMP PEAK  5(5P12) WILD-TYPE     23     92    100     78
D5V6, multiclass
        clus
vv       AMP PEAK  5(5P12) MUTATED AMP PEAK  5(5P12) WILD-TYPE
  CLUS_1                        28                          23
  CLUS_2                        65                          92
  CLUS_3                        55                         100
  CLUS_4                        52                          78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(5P12) MUTATED       52     88     60
  AMP PEAK  5(5P12) WILD-TYPE     93    128     86
D5V7, multiclass
        clus
vv       AMP PEAK  5(5P12) MUTATED AMP PEAK  5(5P12) WILD-TYPE
  CLUS_1                        52                          93
  CLUS_2                        88                         128
  CLUS_3                        60                          86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(5P12) MUTATED       80     59     61
  AMP PEAK  5(5P12) WILD-TYPE    118     65    124
D5V8, multiclass
        clus
vv       AMP PEAK  5(5P12) MUTATED AMP PEAK  5(5P12) WILD-TYPE
  CLUS_1                        80                         118
  CLUS_2                        59                          65
  CLUS_3                        61                         124
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(5P12) MUTATED       70     63     56
  AMP PEAK  5(5P12) WILD-TYPE    104     96     82
D5V9, multiclass
        clus
vv       AMP PEAK  5(5P12) MUTATED AMP PEAK  5(5P12) WILD-TYPE
  CLUS_1                        70                         104
  CLUS_2                        63                          96
  CLUS_3                        56                          82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  5(5P12) MUTATED       39     56     27     43     24
  AMP PEAK  5(5P12) WILD-TYPE     60     72     52     65     33
D5V10, multiclass
        clus
vv       AMP PEAK  5(5P12) MUTATED AMP PEAK  5(5P12) WILD-TYPE
  CLUS_1                        39                          60
  CLUS_2                        56                          72
  CLUS_3                        27                          52
  CLUS_4                        43                          65
  CLUS_5                        24                          33
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(6) Variable = AMP PEAK  6(6P12.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(6P12.1) MUTATED       52     29     14     12
  AMP PEAK  6(6P12.1) WILD-TYPE    126     73    175     30
D6V1, multiclass
        clus
vv       AMP PEAK  6(6P12.1) MUTATED AMP PEAK  6(6P12.1) WILD-TYPE
  CLUS_1                          52                           126
  CLUS_2                          29                            73
  CLUS_3                          14                           175
  CLUS_4                          12                            30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  6(6P12.1) MUTATED       10     25     32     22      7      7
  AMP PEAK  6(6P12.1) WILD-TYPE     72     51     64     65     71     67
                               vv
clus                            CLUS_7
  AMP PEAK  6(6P12.1) MUTATED        4
  AMP PEAK  6(6P12.1) WILD-TYPE     14
D6V2, multiclass
        clus
vv       AMP PEAK  6(6P12.1) MUTATED AMP PEAK  6(6P12.1) WILD-TYPE
  CLUS_1                          10                            72
  CLUS_2                          25                            51
  CLUS_3                          32                            64
  CLUS_4                          22                            65
  CLUS_5                           7                            71
  CLUS_6                           7                            67
  CLUS_7                           4                            14
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(6P12.1) MUTATED        9     13     10     11
  AMP PEAK  6(6P12.1) WILD-TYPE     44     38     27     54
D6V3, multiclass
        clus
vv       AMP PEAK  6(6P12.1) MUTATED AMP PEAK  6(6P12.1) WILD-TYPE
  CLUS_1                           9                            44
  CLUS_2                          13                            38
  CLUS_3                          10                            27
  CLUS_4                          11                            54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(6P12.1) MUTATED       16     18      9
  AMP PEAK  6(6P12.1) WILD-TYPE     60     64     39
D6V4, multiclass
        clus
vv       AMP PEAK  6(6P12.1) MUTATED AMP PEAK  6(6P12.1) WILD-TYPE
  CLUS_1                          16                            60
  CLUS_2                          18                            64
  CLUS_3                           9                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(6P12.1) MUTATED       43     30     30
  AMP PEAK  6(6P12.1) WILD-TYPE    164    104    122
D6V5, multiclass
        clus
vv       AMP PEAK  6(6P12.1) MUTATED AMP PEAK  6(6P12.1) WILD-TYPE
  CLUS_1                          43                           164
  CLUS_2                          30                           104
  CLUS_3                          30                           122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(6P12.1) MUTATED       18     36     31     18
  AMP PEAK  6(6P12.1) WILD-TYPE     33    121    124    112
D6V6, multiclass
        clus
vv       AMP PEAK  6(6P12.1) MUTATED AMP PEAK  6(6P12.1) WILD-TYPE
  CLUS_1                          18                            33
  CLUS_2                          36                           121
  CLUS_3                          31                           124
  CLUS_4                          18                           112
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(6P12.1) MUTATED       31     40     35
  AMP PEAK  6(6P12.1) WILD-TYPE    114    176    111
D6V7, multiclass
        clus
vv       AMP PEAK  6(6P12.1) MUTATED AMP PEAK  6(6P12.1) WILD-TYPE
  CLUS_1                          31                           114
  CLUS_2                          40                           176
  CLUS_3                          35                           111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(6P12.1) MUTATED       51     32     23
  AMP PEAK  6(6P12.1) WILD-TYPE    147     92    162
D6V8, multiclass
        clus
vv       AMP PEAK  6(6P12.1) MUTATED AMP PEAK  6(6P12.1) WILD-TYPE
  CLUS_1                          51                           147
  CLUS_2                          32                            92
  CLUS_3                          23                           162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(6P12.1) MUTATED       38     32     30
  AMP PEAK  6(6P12.1) WILD-TYPE    136    127    108
D6V9, multiclass
        clus
vv       AMP PEAK  6(6P12.1) MUTATED AMP PEAK  6(6P12.1) WILD-TYPE
  CLUS_1                          38                           136
  CLUS_2                          32                           127
  CLUS_3                          30                           108
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  6(6P12.1) MUTATED       20     33      8     24     15
  AMP PEAK  6(6P12.1) WILD-TYPE     79     95     71     84     42
D6V10, multiclass
        clus
vv       AMP PEAK  6(6P12.1) MUTATED AMP PEAK  6(6P12.1) WILD-TYPE
  CLUS_1                          20                            79
  CLUS_2                          33                            95
  CLUS_3                           8                            71
  CLUS_4                          24                            84
  CLUS_5                          15                            42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(7) Variable = AMP PEAK  7(6Q12) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(6Q12) MUTATED       47     23     10     12
  AMP PEAK  7(6Q12) WILD-TYPE    131     79    179     30
D7V1, multiclass
        clus
vv       AMP PEAK  7(6Q12) MUTATED AMP PEAK  7(6Q12) WILD-TYPE
  CLUS_1                        47                         131
  CLUS_2                        23                          79
  CLUS_3                        10                         179
  CLUS_4                        12                          30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK  7(6Q12) MUTATED       10     18     26     22      4      8      4
  AMP PEAK  7(6Q12) WILD-TYPE     72     58     70     65     74     66     14
D7V2, multiclass
        clus
vv       AMP PEAK  7(6Q12) MUTATED AMP PEAK  7(6Q12) WILD-TYPE
  CLUS_1                        10                          72
  CLUS_2                        18                          58
  CLUS_3                        26                          70
  CLUS_4                        22                          65
  CLUS_5                         4                          74
  CLUS_6                         8                          66
  CLUS_7                         4                          14
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(6Q12) MUTATED        8     11     11     10
  AMP PEAK  7(6Q12) WILD-TYPE     45     40     26     55
D7V3, multiclass
        clus
vv       AMP PEAK  7(6Q12) MUTATED AMP PEAK  7(6Q12) WILD-TYPE
  CLUS_1                         8                          45
  CLUS_2                        11                          40
  CLUS_3                        11                          26
  CLUS_4                        10                          55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(6Q12) MUTATED       16     15      9
  AMP PEAK  7(6Q12) WILD-TYPE     60     67     39
D7V4, multiclass
        clus
vv       AMP PEAK  7(6Q12) MUTATED AMP PEAK  7(6Q12) WILD-TYPE
  CLUS_1                        16                          60
  CLUS_2                        15                          67
  CLUS_3                         9                          39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(6Q12) MUTATED       35     23     29
  AMP PEAK  7(6Q12) WILD-TYPE    172    111    123
D7V5, multiclass
        clus
vv       AMP PEAK  7(6Q12) MUTATED AMP PEAK  7(6Q12) WILD-TYPE
  CLUS_1                        35                         172
  CLUS_2                        23                         111
  CLUS_3                        29                         123
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(6Q12) MUTATED       13     28     30     16
  AMP PEAK  7(6Q12) WILD-TYPE     38    129    125    114
D7V6, multiclass
        clus
vv       AMP PEAK  7(6Q12) MUTATED AMP PEAK  7(6Q12) WILD-TYPE
  CLUS_1                        13                          38
  CLUS_2                        28                         129
  CLUS_3                        30                         125
  CLUS_4                        16                         114
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(6Q12) MUTATED       32     34     25
  AMP PEAK  7(6Q12) WILD-TYPE    113    182    121
D7V7, multiclass
        clus
vv       AMP PEAK  7(6Q12) MUTATED AMP PEAK  7(6Q12) WILD-TYPE
  CLUS_1                        32                         113
  CLUS_2                        34                         182
  CLUS_3                        25                         121
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(6Q12) MUTATED       40     25     26
  AMP PEAK  7(6Q12) WILD-TYPE    158     99    159
D7V8, multiclass
        clus
vv       AMP PEAK  7(6Q12) MUTATED AMP PEAK  7(6Q12) WILD-TYPE
  CLUS_1                        40                         158
  CLUS_2                        25                          99
  CLUS_3                        26                         159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(6Q12) MUTATED       34     28     23
  AMP PEAK  7(6Q12) WILD-TYPE    140    131    115
D7V9, multiclass
        clus
vv       AMP PEAK  7(6Q12) MUTATED AMP PEAK  7(6Q12) WILD-TYPE
  CLUS_1                        34                         140
  CLUS_2                        28                         131
  CLUS_3                        23                         115
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  7(6Q12) MUTATED       21     24     10     18     12
  AMP PEAK  7(6Q12) WILD-TYPE     78    104     69     90     45
D7V10, multiclass
        clus
vv       AMP PEAK  7(6Q12) MUTATED AMP PEAK  7(6Q12) WILD-TYPE
  CLUS_1                        21                          78
  CLUS_2                        24                         104
  CLUS_3                        10                          69
  CLUS_4                        18                          90
  CLUS_5                        12                          45
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(8) Variable = AMP PEAK  8(7P11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(7P11.2) MUTATED      106     50     41     18
  AMP PEAK  8(7P11.2) WILD-TYPE     72     52    148     24
D8V1, multiclass
        clus
vv       AMP PEAK  8(7P11.2) MUTATED AMP PEAK  8(7P11.2) WILD-TYPE
  CLUS_1                         106                            72
  CLUS_2                          50                            52
  CLUS_3                          41                           148
  CLUS_4                          18                            24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  8(7P11.2) MUTATED       29     41     52     53      6     23
  AMP PEAK  8(7P11.2) WILD-TYPE     53     35     44     34     72     51
                               vv
clus                            CLUS_7
  AMP PEAK  8(7P11.2) MUTATED       11
  AMP PEAK  8(7P11.2) WILD-TYPE      7
D8V2, multiclass
        clus
vv       AMP PEAK  8(7P11.2) MUTATED AMP PEAK  8(7P11.2) WILD-TYPE
  CLUS_1                          29                            53
  CLUS_2                          41                            35
  CLUS_3                          52                            44
  CLUS_4                          53                            34
  CLUS_5                           6                            72
  CLUS_6                          23                            51
  CLUS_7                          11                             7
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(7P11.2) MUTATED       25     25     17     31
  AMP PEAK  8(7P11.2) WILD-TYPE     28     26     20     34
D8V3, multiclass
        clus
vv       AMP PEAK  8(7P11.2) MUTATED AMP PEAK  8(7P11.2) WILD-TYPE
  CLUS_1                          25                            28
  CLUS_2                          25                            26
  CLUS_3                          17                            20
  CLUS_4                          31                            34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(7P11.2) MUTATED       33     41     24
  AMP PEAK  8(7P11.2) WILD-TYPE     43     41     24
D8V4, multiclass
        clus
vv       AMP PEAK  8(7P11.2) MUTATED AMP PEAK  8(7P11.2) WILD-TYPE
  CLUS_1                          33                            43
  CLUS_2                          41                            41
  CLUS_3                          24                            24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(7P11.2) MUTATED       74     60     73
  AMP PEAK  8(7P11.2) WILD-TYPE    133     74     79
D8V5, multiclass
        clus
vv       AMP PEAK  8(7P11.2) MUTATED AMP PEAK  8(7P11.2) WILD-TYPE
  CLUS_1                          74                           133
  CLUS_2                          60                            74
  CLUS_3                          73                            79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(7P11.2) MUTATED       28     69     70     40
  AMP PEAK  8(7P11.2) WILD-TYPE     23     88     85     90
D8V6, multiclass
        clus
vv       AMP PEAK  8(7P11.2) MUTATED AMP PEAK  8(7P11.2) WILD-TYPE
  CLUS_1                          28                            23
  CLUS_2                          69                            88
  CLUS_3                          70                            85
  CLUS_4                          40                            90
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(7P11.2) MUTATED       60     87     65
  AMP PEAK  8(7P11.2) WILD-TYPE     85    129     81
D8V7, multiclass
        clus
vv       AMP PEAK  8(7P11.2) MUTATED AMP PEAK  8(7P11.2) WILD-TYPE
  CLUS_1                          60                            85
  CLUS_2                          87                           129
  CLUS_3                          65                            81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(7P11.2) MUTATED       94     71     47
  AMP PEAK  8(7P11.2) WILD-TYPE    104     53    138
D8V8, multiclass
        clus
vv       AMP PEAK  8(7P11.2) MUTATED AMP PEAK  8(7P11.2) WILD-TYPE
  CLUS_1                          94                           104
  CLUS_2                          71                            53
  CLUS_3                          47                           138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(7P11.2) MUTATED       74     59     64
  AMP PEAK  8(7P11.2) WILD-TYPE    100    100     74
D8V9, multiclass
        clus
vv       AMP PEAK  8(7P11.2) MUTATED AMP PEAK  8(7P11.2) WILD-TYPE
  CLUS_1                          74                           100
  CLUS_2                          59                           100
  CLUS_3                          64                            74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  8(7P11.2) MUTATED       45     62     15     48     27
  AMP PEAK  8(7P11.2) WILD-TYPE     54     66     64     60     30
D8V10, multiclass
        clus
vv       AMP PEAK  8(7P11.2) MUTATED AMP PEAK  8(7P11.2) WILD-TYPE
  CLUS_1                          45                            54
  CLUS_2                          62                            66
  CLUS_3                          15                            64
  CLUS_4                          48                            60
  CLUS_5                          27                            30
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(9) Variable = AMP PEAK  9(7Q21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(7Q21.3) MUTATED       84     46     22     12
  AMP PEAK  9(7Q21.3) WILD-TYPE     94     56    167     30
D9V1, multiclass
        clus
vv       AMP PEAK  9(7Q21.3) MUTATED AMP PEAK  9(7Q21.3) WILD-TYPE
  CLUS_1                          84                            94
  CLUS_2                          46                            56
  CLUS_3                          22                           167
  CLUS_4                          12                            30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  9(7Q21.3) MUTATED       14     34     29     58      9     13
  AMP PEAK  9(7Q21.3) WILD-TYPE     68     42     67     29     69     61
                               vv
clus                            CLUS_7
  AMP PEAK  9(7Q21.3) MUTATED        7
  AMP PEAK  9(7Q21.3) WILD-TYPE     11
D9V2, multiclass
        clus
vv       AMP PEAK  9(7Q21.3) MUTATED AMP PEAK  9(7Q21.3) WILD-TYPE
  CLUS_1                          14                            68
  CLUS_2                          34                            42
  CLUS_3                          29                            67
  CLUS_4                          58                            29
  CLUS_5                           9                            69
  CLUS_6                          13                            61
  CLUS_7                           7                            11
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(7Q21.3) MUTATED       22     24     14     20
  AMP PEAK  9(7Q21.3) WILD-TYPE     31     27     23     45
D9V3, multiclass
        clus
vv       AMP PEAK  9(7Q21.3) MUTATED AMP PEAK  9(7Q21.3) WILD-TYPE
  CLUS_1                          22                            31
  CLUS_2                          24                            27
  CLUS_3                          14                            23
  CLUS_4                          20                            45
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(7Q21.3) MUTATED       30     35     15
  AMP PEAK  9(7Q21.3) WILD-TYPE     46     47     33
D9V4, multiclass
        clus
vv       AMP PEAK  9(7Q21.3) MUTATED AMP PEAK  9(7Q21.3) WILD-TYPE
  CLUS_1                          30                            46
  CLUS_2                          35                            47
  CLUS_3                          15                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(7Q21.3) MUTATED       75     41     44
  AMP PEAK  9(7Q21.3) WILD-TYPE    132     93    108
D9V5, multiclass
        clus
vv       AMP PEAK  9(7Q21.3) MUTATED AMP PEAK  9(7Q21.3) WILD-TYPE
  CLUS_1                          75                           132
  CLUS_2                          41                            93
  CLUS_3                          44                           108
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(7Q21.3) MUTATED       22     45     49     44
  AMP PEAK  9(7Q21.3) WILD-TYPE     29    112    106     86
D9V6, multiclass
        clus
vv       AMP PEAK  9(7Q21.3) MUTATED AMP PEAK  9(7Q21.3) WILD-TYPE
  CLUS_1                          22                            29
  CLUS_2                          45                           112
  CLUS_3                          49                           106
  CLUS_4                          44                            86
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(7Q21.3) MUTATED       42     80     39
  AMP PEAK  9(7Q21.3) WILD-TYPE    103    136    107
D9V7, multiclass
        clus
vv       AMP PEAK  9(7Q21.3) MUTATED AMP PEAK  9(7Q21.3) WILD-TYPE
  CLUS_1                          42                           103
  CLUS_2                          80                           136
  CLUS_3                          39                           107
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(7Q21.3) MUTATED       63     56     42
  AMP PEAK  9(7Q21.3) WILD-TYPE    135     68    143
D9V8, multiclass
        clus
vv       AMP PEAK  9(7Q21.3) MUTATED AMP PEAK  9(7Q21.3) WILD-TYPE
  CLUS_1                          63                           135
  CLUS_2                          56                            68
  CLUS_3                          42                           143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(7Q21.3) MUTATED       48     53     49
  AMP PEAK  9(7Q21.3) WILD-TYPE    126    106     89
D9V9, multiclass
        clus
vv       AMP PEAK  9(7Q21.3) MUTATED AMP PEAK  9(7Q21.3) WILD-TYPE
  CLUS_1                          48                           126
  CLUS_2                          53                           106
  CLUS_3                          49                            89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  9(7Q21.3) MUTATED       29     59     13     35     14
  AMP PEAK  9(7Q21.3) WILD-TYPE     70     69     66     73     43
D9V10, multiclass
        clus
vv       AMP PEAK  9(7Q21.3) MUTATED AMP PEAK  9(7Q21.3) WILD-TYPE
  CLUS_1                          29                            70
  CLUS_2                          59                            69
  CLUS_3                          13                            66
  CLUS_4                          35                            73
  CLUS_5                          14                            43
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(10) Variable = AMP PEAK 10(8P11.23) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(8P11.23) MUTATED       45     54     45     12
  AMP PEAK 10(8P11.23) WILD-TYPE    133     48    144     30
D10V1, multiclass
        clus
vv       AMP PEAK 10(8P11.23) MUTATED AMP PEAK 10(8P11.23) WILD-TYPE
  CLUS_1                           45                            133
  CLUS_2                           54                             48
  CLUS_3                           45                            144
  CLUS_4                           12                             30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 10(8P11.23) MUTATED       18     29     27     34     26     13
  AMP PEAK 10(8P11.23) WILD-TYPE     64     47     69     53     52     61
                                vv
clus                             CLUS_7
  AMP PEAK 10(8P11.23) MUTATED        9
  AMP PEAK 10(8P11.23) WILD-TYPE      9
D10V2, multiclass
        clus
vv       AMP PEAK 10(8P11.23) MUTATED AMP PEAK 10(8P11.23) WILD-TYPE
  CLUS_1                           18                             64
  CLUS_2                           29                             47
  CLUS_3                           27                             69
  CLUS_4                           34                             53
  CLUS_5                           26                             52
  CLUS_6                           13                             61
  CLUS_7                            9                              9
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(8P11.23) MUTATED       16     18     10     18
  AMP PEAK 10(8P11.23) WILD-TYPE     37     33     27     47
D10V3, multiclass
        clus
vv       AMP PEAK 10(8P11.23) MUTATED AMP PEAK 10(8P11.23) WILD-TYPE
  CLUS_1                           16                             37
  CLUS_2                           18                             33
  CLUS_3                           10                             27
  CLUS_4                           18                             47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(8P11.23) MUTATED       23     26     13
  AMP PEAK 10(8P11.23) WILD-TYPE     53     56     35
D10V4, multiclass
        clus
vv       AMP PEAK 10(8P11.23) MUTATED AMP PEAK 10(8P11.23) WILD-TYPE
  CLUS_1                           23                             53
  CLUS_2                           26                             56
  CLUS_3                           13                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(8P11.23) MUTATED       74     35     43
  AMP PEAK 10(8P11.23) WILD-TYPE    133     99    109
D10V5, multiclass
        clus
vv       AMP PEAK 10(8P11.23) MUTATED AMP PEAK 10(8P11.23) WILD-TYPE
  CLUS_1                           74                            133
  CLUS_2                           35                             99
  CLUS_3                           43                            109
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(8P11.23) MUTATED       19     38     42     53
  AMP PEAK 10(8P11.23) WILD-TYPE     32    119    113     77
D10V6, multiclass
        clus
vv       AMP PEAK 10(8P11.23) MUTATED AMP PEAK 10(8P11.23) WILD-TYPE
  CLUS_1                           19                             32
  CLUS_2                           38                            119
  CLUS_3                           42                            113
  CLUS_4                           53                             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(8P11.23) MUTATED       34     83     37
  AMP PEAK 10(8P11.23) WILD-TYPE    111    133    109
D10V7, multiclass
        clus
vv       AMP PEAK 10(8P11.23) MUTATED AMP PEAK 10(8P11.23) WILD-TYPE
  CLUS_1                           34                            111
  CLUS_2                           83                            133
  CLUS_3                           37                            109
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(8P11.23) MUTATED       51     48     55
  AMP PEAK 10(8P11.23) WILD-TYPE    147     76    130
D10V8, multiclass
        clus
vv       AMP PEAK 10(8P11.23) MUTATED AMP PEAK 10(8P11.23) WILD-TYPE
  CLUS_1                           51                            147
  CLUS_2                           48                             76
  CLUS_3                           55                            130
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(8P11.23) MUTATED       47     55     39
  AMP PEAK 10(8P11.23) WILD-TYPE    127    104     99
D10V9, multiclass
        clus
vv       AMP PEAK 10(8P11.23) MUTATED AMP PEAK 10(8P11.23) WILD-TYPE
  CLUS_1                           47                            127
  CLUS_2                           55                            104
  CLUS_3                           39                             99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 10(8P11.23) MUTATED       28     52     20     29     12
  AMP PEAK 10(8P11.23) WILD-TYPE     71     76     59     79     45
D10V10, multiclass
        clus
vv       AMP PEAK 10(8P11.23) MUTATED AMP PEAK 10(8P11.23) WILD-TYPE
  CLUS_1                           28                             71
  CLUS_2                           52                             76
  CLUS_3                           20                             59
  CLUS_4                           29                             79
  CLUS_5                           12                             45
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(11) Variable = AMP PEAK 11(8Q11.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(8Q11.21) MUTATED      135     55     81     34
  AMP PEAK 11(8Q11.21) WILD-TYPE     43     47    108      8
D11V1, multiclass
        clus
vv       AMP PEAK 11(8Q11.21) MUTATED AMP PEAK 11(8Q11.21) WILD-TYPE
  CLUS_1                          135                             43
  CLUS_2                           55                             47
  CLUS_3                           81                            108
  CLUS_4                           34                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 11(8Q11.21) MUTATED       52     43     80     48     29     40
  AMP PEAK 11(8Q11.21) WILD-TYPE     30     33     16     39     49     34
                                vv
clus                             CLUS_7
  AMP PEAK 11(8Q11.21) MUTATED       13
  AMP PEAK 11(8Q11.21) WILD-TYPE      5
D11V2, multiclass
        clus
vv       AMP PEAK 11(8Q11.21) MUTATED AMP PEAK 11(8Q11.21) WILD-TYPE
  CLUS_1                           52                             30
  CLUS_2                           43                             33
  CLUS_3                           80                             16
  CLUS_4                           48                             39
  CLUS_5                           29                             49
  CLUS_6                           40                             34
  CLUS_7                           13                              5
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(8Q11.21) MUTATED       31     22     22     43
  AMP PEAK 11(8Q11.21) WILD-TYPE     22     29     15     22
D11V3, multiclass
        clus
vv       AMP PEAK 11(8Q11.21) MUTATED AMP PEAK 11(8Q11.21) WILD-TYPE
  CLUS_1                           31                             22
  CLUS_2                           22                             29
  CLUS_3                           22                             15
  CLUS_4                           43                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(8Q11.21) MUTATED       41     47     30
  AMP PEAK 11(8Q11.21) WILD-TYPE     35     35     18
D11V4, multiclass
        clus
vv       AMP PEAK 11(8Q11.21) MUTATED AMP PEAK 11(8Q11.21) WILD-TYPE
  CLUS_1                           41                             35
  CLUS_2                           47                             35
  CLUS_3                           30                             18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(8Q11.21) MUTATED      105     93     96
  AMP PEAK 11(8Q11.21) WILD-TYPE    102     41     56
D11V5, multiclass
        clus
vv       AMP PEAK 11(8Q11.21) MUTATED AMP PEAK 11(8Q11.21) WILD-TYPE
  CLUS_1                          105                            102
  CLUS_2                           93                             41
  CLUS_3                           96                             56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(8Q11.21) MUTATED       28    112     95     59
  AMP PEAK 11(8Q11.21) WILD-TYPE     23     45     60     71
D11V6, multiclass
        clus
vv       AMP PEAK 11(8Q11.21) MUTATED AMP PEAK 11(8Q11.21) WILD-TYPE
  CLUS_1                           28                             23
  CLUS_2                          112                             45
  CLUS_3                           95                             60
  CLUS_4                           59                             71
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(8Q11.21) MUTATED       87    117     99
  AMP PEAK 11(8Q11.21) WILD-TYPE     58     99     47
D11V7, multiclass
        clus
vv       AMP PEAK 11(8Q11.21) MUTATED AMP PEAK 11(8Q11.21) WILD-TYPE
  CLUS_1                           87                             58
  CLUS_2                          117                             99
  CLUS_3                           99                             47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(8Q11.21) MUTATED      139     71     93
  AMP PEAK 11(8Q11.21) WILD-TYPE     59     53     92
D11V8, multiclass
        clus
vv       AMP PEAK 11(8Q11.21) MUTATED AMP PEAK 11(8Q11.21) WILD-TYPE
  CLUS_1                          139                             59
  CLUS_2                           71                             53
  CLUS_3                           93                             92
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(8Q11.21) MUTATED      113     83     86
  AMP PEAK 11(8Q11.21) WILD-TYPE     61     76     52
D11V9, multiclass
        clus
vv       AMP PEAK 11(8Q11.21) MUTATED AMP PEAK 11(8Q11.21) WILD-TYPE
  CLUS_1                          113                             61
  CLUS_2                           83                             76
  CLUS_3                           86                             52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 11(8Q11.21) MUTATED       60     69     36     73     44
  AMP PEAK 11(8Q11.21) WILD-TYPE     39     59     43     35     13
D11V10, multiclass
        clus
vv       AMP PEAK 11(8Q11.21) MUTATED AMP PEAK 11(8Q11.21) WILD-TYPE
  CLUS_1                           60                             39
  CLUS_2                           69                             59
  CLUS_3                           36                             43
  CLUS_4                           73                             35
  CLUS_5                           44                             13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(12) Variable = AMP PEAK 12(8Q24.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(8Q24.21) MUTATED      167     72    105     35
  AMP PEAK 12(8Q24.21) WILD-TYPE     11     30     84      7
D12V1, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                          167                             11
  CLUS_2                           72                             30
  CLUS_3                          105                             84
  CLUS_4                           35                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 12(8Q24.21) MUTATED       63     58     87     69     35     50
  AMP PEAK 12(8Q24.21) WILD-TYPE     19     18      9     18     43     24
                                vv
clus                             CLUS_7
  AMP PEAK 12(8Q24.21) MUTATED       17
  AMP PEAK 12(8Q24.21) WILD-TYPE      1
D12V2, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                           63                             19
  CLUS_2                           58                             18
  CLUS_3                           87                              9
  CLUS_4                           69                             18
  CLUS_5                           35                             43
  CLUS_6                           50                             24
  CLUS_7                           17                              1
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(8Q24.21) MUTATED       36     36     26     53
  AMP PEAK 12(8Q24.21) WILD-TYPE     17     15     11     12
D12V3, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                           36                             17
  CLUS_2                           36                             15
  CLUS_3                           26                             11
  CLUS_4                           53                             12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8Q24.21) MUTATED       53     64     34
  AMP PEAK 12(8Q24.21) WILD-TYPE     23     18     14
D12V4, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                           53                             23
  CLUS_2                           64                             18
  CLUS_3                           34                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8Q24.21) MUTATED      140    109    117
  AMP PEAK 12(8Q24.21) WILD-TYPE     67     25     35
D12V5, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                          140                             67
  CLUS_2                          109                             25
  CLUS_3                          117                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(8Q24.21) MUTATED       37    130    122     77
  AMP PEAK 12(8Q24.21) WILD-TYPE     14     27     33     53
D12V6, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                           37                             14
  CLUS_2                          130                             27
  CLUS_3                          122                             33
  CLUS_4                           77                             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8Q24.21) MUTATED      111    149    116
  AMP PEAK 12(8Q24.21) WILD-TYPE     34     67     30
D12V7, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                          111                             34
  CLUS_2                          149                             67
  CLUS_3                          116                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8Q24.21) MUTATED      162     96    118
  AMP PEAK 12(8Q24.21) WILD-TYPE     36     28     67
D12V8, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                          162                             36
  CLUS_2                           96                             28
  CLUS_3                          118                             67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8Q24.21) MUTATED      139    102    109
  AMP PEAK 12(8Q24.21) WILD-TYPE     35     57     29
D12V9, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                          139                             35
  CLUS_2                          102                             57
  CLUS_3                          109                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 12(8Q24.21) MUTATED       81     92     42     88     47
  AMP PEAK 12(8Q24.21) WILD-TYPE     18     36     37     20     10
D12V10, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                           81                             18
  CLUS_2                           92                             36
  CLUS_3                           42                             37
  CLUS_4                           88                             20
  CLUS_5                           47                             10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(13) Variable = AMP PEAK 13(9P24.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(9P24.1) MUTATED       29     13     42     38
  AMP PEAK 13(9P24.1) WILD-TYPE    149     89    147      4
D13V1, multiclass
        clus
vv       AMP PEAK 13(9P24.1) MUTATED AMP PEAK 13(9P24.1) WILD-TYPE
  CLUS_1                          29                           149
  CLUS_2                          13                            89
  CLUS_3                          42                           147
  CLUS_4                          38                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 13(9P24.1) MUTATED       15      8     21     17     20     38
  AMP PEAK 13(9P24.1) WILD-TYPE     67     68     75     70     58     36
                               vv
clus                            CLUS_7
  AMP PEAK 13(9P24.1) MUTATED        3
  AMP PEAK 13(9P24.1) WILD-TYPE     15
D13V2, multiclass
        clus
vv       AMP PEAK 13(9P24.1) MUTATED AMP PEAK 13(9P24.1) WILD-TYPE
  CLUS_1                          15                            67
  CLUS_2                           8                            68
  CLUS_3                          21                            75
  CLUS_4                          17                            70
  CLUS_5                          20                            58
  CLUS_6                          38                            36
  CLUS_7                           3                            15
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(9P24.1) MUTATED       13     11     15     13
  AMP PEAK 13(9P24.1) WILD-TYPE     40     40     22     52
D13V3, multiclass
        clus
vv       AMP PEAK 13(9P24.1) MUTATED AMP PEAK 13(9P24.1) WILD-TYPE
  CLUS_1                          13                            40
  CLUS_2                          11                            40
  CLUS_3                          15                            22
  CLUS_4                          13                            52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(9P24.1) MUTATED       24     19      9
  AMP PEAK 13(9P24.1) WILD-TYPE     52     63     39
D13V4, multiclass
        clus
vv       AMP PEAK 13(9P24.1) MUTATED AMP PEAK 13(9P24.1) WILD-TYPE
  CLUS_1                          24                            52
  CLUS_2                          19                            63
  CLUS_3                           9                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(9P24.1) MUTATED       37     30     51
  AMP PEAK 13(9P24.1) WILD-TYPE    170    104    101
D13V5, multiclass
        clus
vv       AMP PEAK 13(9P24.1) MUTATED AMP PEAK 13(9P24.1) WILD-TYPE
  CLUS_1                          37                           170
  CLUS_2                          30                           104
  CLUS_3                          51                           101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(9P24.1) MUTATED        6     34     54     24
  AMP PEAK 13(9P24.1) WILD-TYPE     45    123    101    106
D13V6, multiclass
        clus
vv       AMP PEAK 13(9P24.1) MUTATED AMP PEAK 13(9P24.1) WILD-TYPE
  CLUS_1                           6                            45
  CLUS_2                          34                           123
  CLUS_3                          54                           101
  CLUS_4                          24                           106
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(9P24.1) MUTATED       46     43     33
  AMP PEAK 13(9P24.1) WILD-TYPE     99    173    113
D13V7, multiclass
        clus
vv       AMP PEAK 13(9P24.1) MUTATED AMP PEAK 13(9P24.1) WILD-TYPE
  CLUS_1                          46                            99
  CLUS_2                          43                           173
  CLUS_3                          33                           113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(9P24.1) MUTATED       43     20     59
  AMP PEAK 13(9P24.1) WILD-TYPE    155    104    126
D13V8, multiclass
        clus
vv       AMP PEAK 13(9P24.1) MUTATED AMP PEAK 13(9P24.1) WILD-TYPE
  CLUS_1                          43                           155
  CLUS_2                          20                           104
  CLUS_3                          59                           126
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(9P24.1) MUTATED       50     42     27
  AMP PEAK 13(9P24.1) WILD-TYPE    124    117    111
D13V9, multiclass
        clus
vv       AMP PEAK 13(9P24.1) MUTATED AMP PEAK 13(9P24.1) WILD-TYPE
  CLUS_1                          50                           124
  CLUS_2                          42                           117
  CLUS_3                          27                           111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 13(9P24.1) MUTATED       27     24     32     20     16
  AMP PEAK 13(9P24.1) WILD-TYPE     72    104     47     88     41
D13V10, multiclass
        clus
vv       AMP PEAK 13(9P24.1) MUTATED AMP PEAK 13(9P24.1) WILD-TYPE
  CLUS_1                          27                            72
  CLUS_2                          24                           104
  CLUS_3                          32                            47
  CLUS_4                          20                            88
  CLUS_5                          16                            41
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(14) Variable = AMP PEAK 14(9P23) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(9P23) MUTATED       30     14     40     37
  AMP PEAK 14(9P23) WILD-TYPE    148     88    149      5
D14V1, multiclass
        clus
vv       AMP PEAK 14(9P23) MUTATED AMP PEAK 14(9P23) WILD-TYPE
  CLUS_1                        30                         148
  CLUS_2                        14                          88
  CLUS_3                        40                         149
  CLUS_4                        37                           5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 14(9P23) MUTATED       16      7     20     19     19     37      3
  AMP PEAK 14(9P23) WILD-TYPE     66     69     76     68     59     37     15
D14V2, multiclass
        clus
vv       AMP PEAK 14(9P23) MUTATED AMP PEAK 14(9P23) WILD-TYPE
  CLUS_1                        16                          66
  CLUS_2                         7                          69
  CLUS_3                        20                          76
  CLUS_4                        19                          68
  CLUS_5                        19                          59
  CLUS_6                        37                          37
  CLUS_7                         3                          15
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(9P23) MUTATED       13     12     14     15
  AMP PEAK 14(9P23) WILD-TYPE     40     39     23     50
D14V3, multiclass
        clus
vv       AMP PEAK 14(9P23) MUTATED AMP PEAK 14(9P23) WILD-TYPE
  CLUS_1                        13                          40
  CLUS_2                        12                          39
  CLUS_3                        14                          23
  CLUS_4                        15                          50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(9P23) MUTATED       22     23      9
  AMP PEAK 14(9P23) WILD-TYPE     54     59     39
D14V4, multiclass
        clus
vv       AMP PEAK 14(9P23) MUTATED AMP PEAK 14(9P23) WILD-TYPE
  CLUS_1                        22                          54
  CLUS_2                        23                          59
  CLUS_3                         9                          39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(9P23) MUTATED       35     32     49
  AMP PEAK 14(9P23) WILD-TYPE    172    102    103
D14V5, multiclass
        clus
vv       AMP PEAK 14(9P23) MUTATED AMP PEAK 14(9P23) WILD-TYPE
  CLUS_1                        35                         172
  CLUS_2                        32                         102
  CLUS_3                        49                         103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(9P23) MUTATED        5     36     50     25
  AMP PEAK 14(9P23) WILD-TYPE     46    121    105    105
D14V6, multiclass
        clus
vv       AMP PEAK 14(9P23) MUTATED AMP PEAK 14(9P23) WILD-TYPE
  CLUS_1                         5                          46
  CLUS_2                        36                         121
  CLUS_3                        50                         105
  CLUS_4                        25                         105
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(9P23) MUTATED       44     42     35
  AMP PEAK 14(9P23) WILD-TYPE    101    174    111
D14V7, multiclass
        clus
vv       AMP PEAK 14(9P23) MUTATED AMP PEAK 14(9P23) WILD-TYPE
  CLUS_1                        44                         101
  CLUS_2                        42                         174
  CLUS_3                        35                         111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(9P23) MUTATED       45     19     57
  AMP PEAK 14(9P23) WILD-TYPE    153    105    128
D14V8, multiclass
        clus
vv       AMP PEAK 14(9P23) MUTATED AMP PEAK 14(9P23) WILD-TYPE
  CLUS_1                        45                         153
  CLUS_2                        19                         105
  CLUS_3                        57                         128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(9P23) MUTATED       50     37     29
  AMP PEAK 14(9P23) WILD-TYPE    124    122    109
D14V9, multiclass
        clus
vv       AMP PEAK 14(9P23) MUTATED AMP PEAK 14(9P23) WILD-TYPE
  CLUS_1                        50                         124
  CLUS_2                        37                         122
  CLUS_3                        29                         109
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 14(9P23) MUTATED       27     24     28     21     16
  AMP PEAK 14(9P23) WILD-TYPE     72    104     51     87     41
D14V10, multiclass
        clus
vv       AMP PEAK 14(9P23) MUTATED AMP PEAK 14(9P23) WILD-TYPE
  CLUS_1                        27                          72
  CLUS_2                        24                         104
  CLUS_3                        28                          51
  CLUS_4                        21                          87
  CLUS_5                        16                          41
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(15) Variable = AMP PEAK 15(9P13.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(9P13.3) MUTATED       39     24     37     35
  AMP PEAK 15(9P13.3) WILD-TYPE    139     78    152      7
D15V1, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          39                           139
  CLUS_2                          24                            78
  CLUS_3                          37                           152
  CLUS_4                          35                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 15(9P13.3) MUTATED       18     14     27     24     14     34
  AMP PEAK 15(9P13.3) WILD-TYPE     64     62     69     63     64     40
                               vv
clus                            CLUS_7
  AMP PEAK 15(9P13.3) MUTATED        4
  AMP PEAK 15(9P13.3) WILD-TYPE     14
D15V2, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          18                            64
  CLUS_2                          14                            62
  CLUS_3                          27                            69
  CLUS_4                          24                            63
  CLUS_5                          14                            64
  CLUS_6                          34                            40
  CLUS_7                           4                            14
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(9P13.3) MUTATED       15     13     15     19
  AMP PEAK 15(9P13.3) WILD-TYPE     38     38     22     46
D15V3, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          15                            38
  CLUS_2                          13                            38
  CLUS_3                          15                            22
  CLUS_4                          19                            46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(9P13.3) MUTATED       27     26      9
  AMP PEAK 15(9P13.3) WILD-TYPE     49     56     39
D15V4, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          27                            49
  CLUS_2                          26                            56
  CLUS_3                           9                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(9P13.3) MUTATED       37     41     52
  AMP PEAK 15(9P13.3) WILD-TYPE    170     93    100
D15V5, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          37                           170
  CLUS_2                          41                            93
  CLUS_3                          52                           100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(9P13.3) MUTATED        9     46     51     24
  AMP PEAK 15(9P13.3) WILD-TYPE     42    111    104    106
D15V6, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                           9                            42
  CLUS_2                          46                           111
  CLUS_3                          51                           104
  CLUS_4                          24                           106
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(9P13.3) MUTATED       46     41     48
  AMP PEAK 15(9P13.3) WILD-TYPE     99    175     98
D15V7, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          46                            99
  CLUS_2                          41                           175
  CLUS_3                          48                            98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(9P13.3) MUTATED       62     23     50
  AMP PEAK 15(9P13.3) WILD-TYPE    136    101    135
D15V8, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          62                           136
  CLUS_2                          23                           101
  CLUS_3                          50                           135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(9P13.3) MUTATED       50     41     38
  AMP PEAK 15(9P13.3) WILD-TYPE    124    118    100
D15V9, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          50                           124
  CLUS_2                          41                           118
  CLUS_3                          38                           100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 15(9P13.3) MUTATED       30     26     20     35     18
  AMP PEAK 15(9P13.3) WILD-TYPE     69    102     59     73     39
D15V10, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          30                            69
  CLUS_2                          26                           102
  CLUS_3                          20                            59
  CLUS_4                          35                            73
  CLUS_5                          18                            39
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(16) Variable = AMP PEAK 16(9Q34.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(9Q34.3) MUTATED       55     47     38     34
  AMP PEAK 16(9Q34.3) WILD-TYPE    123     55    151      8
D16V1, multiclass
        clus
vv       AMP PEAK 16(9Q34.3) MUTATED AMP PEAK 16(9Q34.3) WILD-TYPE
  CLUS_1                          55                           123
  CLUS_2                          47                            55
  CLUS_3                          38                           151
  CLUS_4                          34                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 16(9Q34.3) MUTATED       20     21     31     37     22     35
  AMP PEAK 16(9Q34.3) WILD-TYPE     62     55     65     50     56     39
                               vv
clus                            CLUS_7
  AMP PEAK 16(9Q34.3) MUTATED        8
  AMP PEAK 16(9Q34.3) WILD-TYPE     10
D16V2, multiclass
        clus
vv       AMP PEAK 16(9Q34.3) MUTATED AMP PEAK 16(9Q34.3) WILD-TYPE
  CLUS_1                          20                            62
  CLUS_2                          21                            55
  CLUS_3                          31                            65
  CLUS_4                          37                            50
  CLUS_5                          22                            56
  CLUS_6                          35                            39
  CLUS_7                           8                            10
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(9Q34.3) MUTATED       20     20     19     20
  AMP PEAK 16(9Q34.3) WILD-TYPE     33     31     18     45
D16V3, multiclass
        clus
vv       AMP PEAK 16(9Q34.3) MUTATED AMP PEAK 16(9Q34.3) WILD-TYPE
  CLUS_1                          20                            33
  CLUS_2                          20                            31
  CLUS_3                          19                            18
  CLUS_4                          20                            45
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(9Q34.3) MUTATED       36     32     11
  AMP PEAK 16(9Q34.3) WILD-TYPE     40     50     37
D16V4, multiclass
        clus
vv       AMP PEAK 16(9Q34.3) MUTATED AMP PEAK 16(9Q34.3) WILD-TYPE
  CLUS_1                          36                            40
  CLUS_2                          32                            50
  CLUS_3                          11                            37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(9Q34.3) MUTATED       69     45     53
  AMP PEAK 16(9Q34.3) WILD-TYPE    138     89     99
D16V5, multiclass
        clus
vv       AMP PEAK 16(9Q34.3) MUTATED AMP PEAK 16(9Q34.3) WILD-TYPE
  CLUS_1                          69                           138
  CLUS_2                          45                            89
  CLUS_3                          53                            99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(9Q34.3) MUTATED       14     53     60     40
  AMP PEAK 16(9Q34.3) WILD-TYPE     37    104     95     90
D16V6, multiclass
        clus
vv       AMP PEAK 16(9Q34.3) MUTATED AMP PEAK 16(9Q34.3) WILD-TYPE
  CLUS_1                          14                            37
  CLUS_2                          53                           104
  CLUS_3                          60                            95
  CLUS_4                          40                            90
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(9Q34.3) MUTATED       53     70     50
  AMP PEAK 16(9Q34.3) WILD-TYPE     92    146     96
D16V7, multiclass
        clus
vv       AMP PEAK 16(9Q34.3) MUTATED AMP PEAK 16(9Q34.3) WILD-TYPE
  CLUS_1                          53                            92
  CLUS_2                          70                           146
  CLUS_3                          50                            96
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(9Q34.3) MUTATED       69     34     70
  AMP PEAK 16(9Q34.3) WILD-TYPE    129     90    115
D16V8, multiclass
        clus
vv       AMP PEAK 16(9Q34.3) MUTATED AMP PEAK 16(9Q34.3) WILD-TYPE
  CLUS_1                          69                           129
  CLUS_2                          34                            90
  CLUS_3                          70                           115
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(9Q34.3) MUTATED       58     56     46
  AMP PEAK 16(9Q34.3) WILD-TYPE    116    103     92
D16V9, multiclass
        clus
vv       AMP PEAK 16(9Q34.3) MUTATED AMP PEAK 16(9Q34.3) WILD-TYPE
  CLUS_1                          58                           116
  CLUS_2                          56                           103
  CLUS_3                          46                            92
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 16(9Q34.3) MUTATED       38     39     26     35     22
  AMP PEAK 16(9Q34.3) WILD-TYPE     61     89     53     73     35
D16V10, multiclass
        clus
vv       AMP PEAK 16(9Q34.3) MUTATED AMP PEAK 16(9Q34.3) WILD-TYPE
  CLUS_1                          38                            61
  CLUS_2                          39                            89
  CLUS_3                          26                            53
  CLUS_4                          35                            73
  CLUS_5                          22                            35
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(17) Variable = AMP PEAK 17(11P13) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(11P13) MUTATED       50     13     25     13
  AMP PEAK 17(11P13) WILD-TYPE    128     89    164     29
D17V1, multiclass
        clus
vv       AMP PEAK 17(11P13) MUTATED AMP PEAK 17(11P13) WILD-TYPE
  CLUS_1                         50                          128
  CLUS_2                         13                           89
  CLUS_3                         25                          164
  CLUS_4                         13                           29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 17(11P13) MUTATED        9      9     30     23      9     16      5
  AMP PEAK 17(11P13) WILD-TYPE     73     67     66     64     69     58     13
D17V2, multiclass
        clus
vv       AMP PEAK 17(11P13) MUTATED AMP PEAK 17(11P13) WILD-TYPE
  CLUS_1                          9                           73
  CLUS_2                          9                           67
  CLUS_3                         30                           66
  CLUS_4                         23                           64
  CLUS_5                          9                           69
  CLUS_6                         16                           58
  CLUS_7                          5                           13
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(11P13) MUTATED       15      9      6     12
  AMP PEAK 17(11P13) WILD-TYPE     38     42     31     53
D17V3, multiclass
        clus
vv       AMP PEAK 17(11P13) MUTATED AMP PEAK 17(11P13) WILD-TYPE
  CLUS_1                         15                           38
  CLUS_2                          9                           42
  CLUS_3                          6                           31
  CLUS_4                         12                           53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(11P13) MUTATED       20     12     10
  AMP PEAK 17(11P13) WILD-TYPE     56     70     38
D17V4, multiclass
        clus
vv       AMP PEAK 17(11P13) MUTATED AMP PEAK 17(11P13) WILD-TYPE
  CLUS_1                         20                           56
  CLUS_2                         12                           70
  CLUS_3                         10                           38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(11P13) MUTATED       42     27     29
  AMP PEAK 17(11P13) WILD-TYPE    165    107    123
D17V5, multiclass
        clus
vv       AMP PEAK 17(11P13) MUTATED AMP PEAK 17(11P13) WILD-TYPE
  CLUS_1                         42                          165
  CLUS_2                         27                          107
  CLUS_3                         29                          123
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(11P13) MUTATED        7     36     35     20
  AMP PEAK 17(11P13) WILD-TYPE     44    121    120    110
D17V6, multiclass
        clus
vv       AMP PEAK 17(11P13) MUTATED AMP PEAK 17(11P13) WILD-TYPE
  CLUS_1                          7                           44
  CLUS_2                         36                          121
  CLUS_3                         35                          120
  CLUS_4                         20                          110
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(11P13) MUTATED       29     39     30
  AMP PEAK 17(11P13) WILD-TYPE    116    177    116
D17V7, multiclass
        clus
vv       AMP PEAK 17(11P13) MUTATED AMP PEAK 17(11P13) WILD-TYPE
  CLUS_1                         29                          116
  CLUS_2                         39                          177
  CLUS_3                         30                          116
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(11P13) MUTATED       43     23     32
  AMP PEAK 17(11P13) WILD-TYPE    155    101    153
D17V8, multiclass
        clus
vv       AMP PEAK 17(11P13) MUTATED AMP PEAK 17(11P13) WILD-TYPE
  CLUS_1                         43                          155
  CLUS_2                         23                          101
  CLUS_3                         32                          153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(11P13) MUTATED       40     26     26
  AMP PEAK 17(11P13) WILD-TYPE    134    133    112
D17V9, multiclass
        clus
vv       AMP PEAK 17(11P13) MUTATED AMP PEAK 17(11P13) WILD-TYPE
  CLUS_1                         40                          134
  CLUS_2                         26                          133
  CLUS_3                         26                          112
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 17(11P13) MUTATED       26     24     11     15     16
  AMP PEAK 17(11P13) WILD-TYPE     73    104     68     93     41
D17V10, multiclass
        clus
vv       AMP PEAK 17(11P13) MUTATED AMP PEAK 17(11P13) WILD-TYPE
  CLUS_1                         26                           73
  CLUS_2                         24                          104
  CLUS_3                         11                           68
  CLUS_4                         15                           93
  CLUS_5                         16                           41
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(18) Variable = AMP PEAK 18(11Q13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(11Q13.3) MUTATED      133     39     37     14
  AMP PEAK 18(11Q13.3) WILD-TYPE     45     63    152     28
D18V1, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                          133                             45
  CLUS_2                           39                             63
  CLUS_3                           37                            152
  CLUS_4                           14                             28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 18(11Q13.3) MUTATED       30     30     62     52     15     20
  AMP PEAK 18(11Q13.3) WILD-TYPE     52     46     34     35     63     54
                                vv
clus                             CLUS_7
  AMP PEAK 18(11Q13.3) MUTATED       14
  AMP PEAK 18(11Q13.3) WILD-TYPE      4
D18V2, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           30                             52
  CLUS_2                           30                             46
  CLUS_3                           62                             34
  CLUS_4                           52                             35
  CLUS_5                           15                             63
  CLUS_6                           20                             54
  CLUS_7                           14                              4
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(11Q13.3) MUTATED       26     25     15     32
  AMP PEAK 18(11Q13.3) WILD-TYPE     27     26     22     33
D18V3, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           26                             27
  CLUS_2                           25                             26
  CLUS_3                           15                             22
  CLUS_4                           32                             33
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11Q13.3) MUTATED       39     37     22
  AMP PEAK 18(11Q13.3) WILD-TYPE     37     45     26
D18V4, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           39                             37
  CLUS_2                           37                             45
  CLUS_3                           22                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11Q13.3) MUTATED       82     66     71
  AMP PEAK 18(11Q13.3) WILD-TYPE    125     68     81
D18V5, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           82                            125
  CLUS_2                           66                             68
  CLUS_3                           71                             81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(11Q13.3) MUTATED       18     76     75     50
  AMP PEAK 18(11Q13.3) WILD-TYPE     33     81     80     80
D18V6, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           18                             33
  CLUS_2                           76                             81
  CLUS_3                           75                             80
  CLUS_4                           50                             80
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11Q13.3) MUTATED       68     87     66
  AMP PEAK 18(11Q13.3) WILD-TYPE     77    129     80
D18V7, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           68                             77
  CLUS_2                           87                            129
  CLUS_3                           66                             80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11Q13.3) MUTATED       95     62     64
  AMP PEAK 18(11Q13.3) WILD-TYPE    103     62    121
D18V8, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           95                            103
  CLUS_2                           62                             62
  CLUS_3                           64                            121
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11Q13.3) MUTATED       74     62     67
  AMP PEAK 18(11Q13.3) WILD-TYPE    100     97     71
D18V9, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           74                            100
  CLUS_2                           62                             97
  CLUS_3                           67                             71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 18(11Q13.3) MUTATED       45     56     26     46     30
  AMP PEAK 18(11Q13.3) WILD-TYPE     54     72     53     62     27
D18V10, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           45                             54
  CLUS_2                           56                             72
  CLUS_3                           26                             53
  CLUS_4                           46                             62
  CLUS_5                           30                             27
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(19) Variable = AMP PEAK 19(12P13.33) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(12P13.33) MUTATED       73     56     19     14
  AMP PEAK 19(12P13.33) WILD-TYPE    105     46    170     28
D19V1, multiclass
        clus
vv       AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE
  CLUS_1                            73                             105
  CLUS_2                            56                              46
  CLUS_3                            19                             170
  CLUS_4                            14                              28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 19(12P13.33) MUTATED       13     36     33     43     23     10
  AMP PEAK 19(12P13.33) WILD-TYPE     69     40     63     44     55     64
                                 vv
clus                              CLUS_7
  AMP PEAK 19(12P13.33) MUTATED        4
  AMP PEAK 19(12P13.33) WILD-TYPE     14
D19V2, multiclass
        clus
vv       AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE
  CLUS_1                            13                              69
  CLUS_2                            36                              40
  CLUS_3                            33                              63
  CLUS_4                            43                              44
  CLUS_5                            23                              55
  CLUS_6                            10                              64
  CLUS_7                             4                              14
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(12P13.33) MUTATED       23     23     12     15
  AMP PEAK 19(12P13.33) WILD-TYPE     30     28     25     50
D19V3, multiclass
        clus
vv       AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE
  CLUS_1                            23                              30
  CLUS_2                            23                              28
  CLUS_3                            12                              25
  CLUS_4                            15                              50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(12P13.33) MUTATED       30     29     14
  AMP PEAK 19(12P13.33) WILD-TYPE     46     53     34
D19V4, multiclass
        clus
vv       AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE
  CLUS_1                            30                              46
  CLUS_2                            29                              53
  CLUS_3                            14                              34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(12P13.33) MUTATED       79     43     35
  AMP PEAK 19(12P13.33) WILD-TYPE    128     91    117
D19V5, multiclass
        clus
vv       AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE
  CLUS_1                            79                             128
  CLUS_2                            43                              91
  CLUS_3                            35                             117
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(12P13.33) MUTATED       24     50     34     49
  AMP PEAK 19(12P13.33) WILD-TYPE     27    107    121     81
D19V6, multiclass
        clus
vv       AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE
  CLUS_1                            24                              27
  CLUS_2                            50                             107
  CLUS_3                            34                             121
  CLUS_4                            49                              81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(12P13.33) MUTATED       34     80     47
  AMP PEAK 19(12P13.33) WILD-TYPE    111    136     99
D19V7, multiclass
        clus
vv       AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE
  CLUS_1                            34                             111
  CLUS_2                            80                             136
  CLUS_3                            47                              99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(12P13.33) MUTATED       66     49     46
  AMP PEAK 19(12P13.33) WILD-TYPE    132     75    139
D19V8, multiclass
        clus
vv       AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE
  CLUS_1                            66                             132
  CLUS_2                            49                              75
  CLUS_3                            46                             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(12P13.33) MUTATED       46     54     49
  AMP PEAK 19(12P13.33) WILD-TYPE    128    105     89
D19V9, multiclass
        clus
vv       AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE
  CLUS_1                            46                             128
  CLUS_2                            54                             105
  CLUS_3                            49                              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 19(12P13.33) MUTATED       28     54     15     39     13
  AMP PEAK 19(12P13.33) WILD-TYPE     71     74     64     69     44
D19V10, multiclass
        clus
vv       AMP PEAK 19(12P13.33) MUTATED AMP PEAK 19(12P13.33) WILD-TYPE
  CLUS_1                            28                              71
  CLUS_2                            54                              74
  CLUS_3                            15                              64
  CLUS_4                            39                              69
  CLUS_5                            13                              44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(20) Variable = AMP PEAK 20(12Q15) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(12Q15) MUTATED       47     28     14     12
  AMP PEAK 20(12Q15) WILD-TYPE    131     74    175     30
D20V1, multiclass
        clus
vv       AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE
  CLUS_1                         47                          131
  CLUS_2                         28                           74
  CLUS_3                         14                          175
  CLUS_4                         12                           30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 20(12Q15) MUTATED        8     21     22     28     13      7      2
  AMP PEAK 20(12Q15) WILD-TYPE     74     55     74     59     65     67     16
D20V2, multiclass
        clus
vv       AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE
  CLUS_1                          8                           74
  CLUS_2                         21                           55
  CLUS_3                         22                           74
  CLUS_4                         28                           59
  CLUS_5                         13                           65
  CLUS_6                          7                           67
  CLUS_7                          2                           16
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(12Q15) MUTATED       12     18      6     10
  AMP PEAK 20(12Q15) WILD-TYPE     41     33     31     55
D20V3, multiclass
        clus
vv       AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE
  CLUS_1                         12                           41
  CLUS_2                         18                           33
  CLUS_3                          6                           31
  CLUS_4                         10                           55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(12Q15) MUTATED       16     23      7
  AMP PEAK 20(12Q15) WILD-TYPE     60     59     41
D20V4, multiclass
        clus
vv       AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE
  CLUS_1                         16                           60
  CLUS_2                         23                           59
  CLUS_3                          7                           41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(12Q15) MUTATED       49     25     23
  AMP PEAK 20(12Q15) WILD-TYPE    158    109    129
D20V5, multiclass
        clus
vv       AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE
  CLUS_1                         49                          158
  CLUS_2                         25                          109
  CLUS_3                         23                          129
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(12Q15) MUTATED       15     28     23     31
  AMP PEAK 20(12Q15) WILD-TYPE     36    129    132     99
D20V6, multiclass
        clus
vv       AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE
  CLUS_1                         15                           36
  CLUS_2                         28                          129
  CLUS_3                         23                          132
  CLUS_4                         31                           99
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(12Q15) MUTATED       27     44     30
  AMP PEAK 20(12Q15) WILD-TYPE    118    172    116
D20V7, multiclass
        clus
vv       AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE
  CLUS_1                         27                          118
  CLUS_2                         44                          172
  CLUS_3                         30                          116
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(12Q15) MUTATED       42     30     29
  AMP PEAK 20(12Q15) WILD-TYPE    156     94    156
D20V8, multiclass
        clus
vv       AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE
  CLUS_1                         42                          156
  CLUS_2                         30                           94
  CLUS_3                         29                          156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(12Q15) MUTATED       35     32     27
  AMP PEAK 20(12Q15) WILD-TYPE    139    127    111
D20V9, multiclass
        clus
vv       AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE
  CLUS_1                         35                          139
  CLUS_2                         32                          127
  CLUS_3                         27                          111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 20(12Q15) MUTATED       15     32     13     23     11
  AMP PEAK 20(12Q15) WILD-TYPE     84     96     66     85     46
D20V10, multiclass
        clus
vv       AMP PEAK 20(12Q15) MUTATED AMP PEAK 20(12Q15) WILD-TYPE
  CLUS_1                         15                           84
  CLUS_2                         32                           96
  CLUS_3                         13                           66
  CLUS_4                         23                           85
  CLUS_5                         11                           46
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(21) Variable = AMP PEAK 21(13Q22.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(13Q22.1) MUTATED       71     13     17      3
  AMP PEAK 21(13Q22.1) WILD-TYPE    107     89    172     39
D21V1, multiclass
        clus
vv       AMP PEAK 21(13Q22.1) MUTATED AMP PEAK 21(13Q22.1) WILD-TYPE
  CLUS_1                           71                            107
  CLUS_2                           13                             89
  CLUS_3                           17                            172
  CLUS_4                            3                             39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 21(13Q22.1) MUTATED        8     19     35     18     12      5
  AMP PEAK 21(13Q22.1) WILD-TYPE     74     57     61     69     66     69
                                vv
clus                             CLUS_7
  AMP PEAK 21(13Q22.1) MUTATED        7
  AMP PEAK 21(13Q22.1) WILD-TYPE     11
D21V2, multiclass
        clus
vv       AMP PEAK 21(13Q22.1) MUTATED AMP PEAK 21(13Q22.1) WILD-TYPE
  CLUS_1                            8                             74
  CLUS_2                           19                             57
  CLUS_3                           35                             61
  CLUS_4                           18                             69
  CLUS_5                           12                             66
  CLUS_6                            5                             69
  CLUS_7                            7                             11
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(13Q22.1) MUTATED       13     16      4     16
  AMP PEAK 21(13Q22.1) WILD-TYPE     40     35     33     49
D21V3, multiclass
        clus
vv       AMP PEAK 21(13Q22.1) MUTATED AMP PEAK 21(13Q22.1) WILD-TYPE
  CLUS_1                           13                             40
  CLUS_2                           16                             35
  CLUS_3                            4                             33
  CLUS_4                           16                             49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(13Q22.1) MUTATED       18     24      7
  AMP PEAK 21(13Q22.1) WILD-TYPE     58     58     41
D21V4, multiclass
        clus
vv       AMP PEAK 21(13Q22.1) MUTATED AMP PEAK 21(13Q22.1) WILD-TYPE
  CLUS_1                           18                             58
  CLUS_2                           24                             58
  CLUS_3                            7                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(13Q22.1) MUTATED       35     31     32
  AMP PEAK 21(13Q22.1) WILD-TYPE    172    103    120
D21V5, multiclass
        clus
vv       AMP PEAK 21(13Q22.1) MUTATED AMP PEAK 21(13Q22.1) WILD-TYPE
  CLUS_1                           35                            172
  CLUS_2                           31                            103
  CLUS_3                           32                            120
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(13Q22.1) MUTATED       10     39     28     21
  AMP PEAK 21(13Q22.1) WILD-TYPE     41    118    127    109
D21V6, multiclass
        clus
vv       AMP PEAK 21(13Q22.1) MUTATED AMP PEAK 21(13Q22.1) WILD-TYPE
  CLUS_1                           10                             41
  CLUS_2                           39                            118
  CLUS_3                           28                            127
  CLUS_4                           21                            109
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(13Q22.1) MUTATED       25     43     34
  AMP PEAK 21(13Q22.1) WILD-TYPE    120    173    112
D21V7, multiclass
        clus
vv       AMP PEAK 21(13Q22.1) MUTATED AMP PEAK 21(13Q22.1) WILD-TYPE
  CLUS_1                           25                            120
  CLUS_2                           43                            173
  CLUS_3                           34                            112
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(13Q22.1) MUTATED       49     27     26
  AMP PEAK 21(13Q22.1) WILD-TYPE    149     97    159
D21V8, multiclass
        clus
vv       AMP PEAK 21(13Q22.1) MUTATED AMP PEAK 21(13Q22.1) WILD-TYPE
  CLUS_1                           49                            149
  CLUS_2                           27                             97
  CLUS_3                           26                            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(13Q22.1) MUTATED       32     32     29
  AMP PEAK 21(13Q22.1) WILD-TYPE    142    127    109
D21V9, multiclass
        clus
vv       AMP PEAK 21(13Q22.1) MUTATED AMP PEAK 21(13Q22.1) WILD-TYPE
  CLUS_1                           32                            142
  CLUS_2                           32                            127
  CLUS_3                           29                            109
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 21(13Q22.1) MUTATED       20     27      6     26     14
  AMP PEAK 21(13Q22.1) WILD-TYPE     79    101     73     82     43
D21V10, multiclass
        clus
vv       AMP PEAK 21(13Q22.1) MUTATED AMP PEAK 21(13Q22.1) WILD-TYPE
  CLUS_1                           20                             79
  CLUS_2                           27                            101
  CLUS_3                            6                             73
  CLUS_4                           26                             82
  CLUS_5                           14                             43
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(22) Variable = AMP PEAK 22(13Q34) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(13Q34) MUTATED       66     11     21      8
  AMP PEAK 22(13Q34) WILD-TYPE    112     91    168     34
D22V1, multiclass
        clus
vv       AMP PEAK 22(13Q34) MUTATED AMP PEAK 22(13Q34) WILD-TYPE
  CLUS_1                         66                          112
  CLUS_2                         11                           91
  CLUS_3                         21                          168
  CLUS_4                          8                           34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 22(13Q34) MUTATED       11     18     33     20     11      6      7
  AMP PEAK 22(13Q34) WILD-TYPE     71     58     63     67     67     68     11
D22V2, multiclass
        clus
vv       AMP PEAK 22(13Q34) MUTATED AMP PEAK 22(13Q34) WILD-TYPE
  CLUS_1                         11                           71
  CLUS_2                         18                           58
  CLUS_3                         33                           63
  CLUS_4                         20                           67
  CLUS_5                         11                           67
  CLUS_6                          6                           68
  CLUS_7                          7                           11
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(13Q34) MUTATED       15     10      4     13
  AMP PEAK 22(13Q34) WILD-TYPE     38     41     33     52
D22V3, multiclass
        clus
vv       AMP PEAK 22(13Q34) MUTATED AMP PEAK 22(13Q34) WILD-TYPE
  CLUS_1                         15                           38
  CLUS_2                         10                           41
  CLUS_3                          4                           33
  CLUS_4                         13                           52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(13Q34) MUTATED       18     18      6
  AMP PEAK 22(13Q34) WILD-TYPE     58     64     42
D22V4, multiclass
        clus
vv       AMP PEAK 22(13Q34) MUTATED AMP PEAK 22(13Q34) WILD-TYPE
  CLUS_1                         18                           58
  CLUS_2                         18                           64
  CLUS_3                          6                           42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(13Q34) MUTATED       35     32     35
  AMP PEAK 22(13Q34) WILD-TYPE    172    102    117
D22V5, multiclass
        clus
vv       AMP PEAK 22(13Q34) MUTATED AMP PEAK 22(13Q34) WILD-TYPE
  CLUS_1                         35                          172
  CLUS_2                         32                          102
  CLUS_3                         35                          117
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(13Q34) MUTATED       10     40     31     21
  AMP PEAK 22(13Q34) WILD-TYPE     41    117    124    109
D22V6, multiclass
        clus
vv       AMP PEAK 22(13Q34) MUTATED AMP PEAK 22(13Q34) WILD-TYPE
  CLUS_1                         10                           41
  CLUS_2                         40                          117
  CLUS_3                         31                          124
  CLUS_4                         21                          109
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(13Q34) MUTATED       27     41     36
  AMP PEAK 22(13Q34) WILD-TYPE    118    175    110
D22V7, multiclass
        clus
vv       AMP PEAK 22(13Q34) MUTATED AMP PEAK 22(13Q34) WILD-TYPE
  CLUS_1                         27                          118
  CLUS_2                         41                          175
  CLUS_3                         36                          110
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(13Q34) MUTATED       52     26     26
  AMP PEAK 22(13Q34) WILD-TYPE    146     98    159
D22V8, multiclass
        clus
vv       AMP PEAK 22(13Q34) MUTATED AMP PEAK 22(13Q34) WILD-TYPE
  CLUS_1                         52                          146
  CLUS_2                         26                           98
  CLUS_3                         26                          159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(13Q34) MUTATED       40     27     31
  AMP PEAK 22(13Q34) WILD-TYPE    134    132    107
D22V9, multiclass
        clus
vv       AMP PEAK 22(13Q34) MUTATED AMP PEAK 22(13Q34) WILD-TYPE
  CLUS_1                         40                          134
  CLUS_2                         27                          132
  CLUS_3                         31                          107
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 22(13Q34) MUTATED       24     23      8     29     14
  AMP PEAK 22(13Q34) WILD-TYPE     75    105     71     79     43
D22V10, multiclass
        clus
vv       AMP PEAK 22(13Q34) MUTATED AMP PEAK 22(13Q34) WILD-TYPE
  CLUS_1                         24                           75
  CLUS_2                         23                          105
  CLUS_3                          8                           71
  CLUS_4                         29                           79
  CLUS_5                         14                           43
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(23) Variable = AMP PEAK 23(15Q26.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(15Q26.3) MUTATED       45     27     22      8
  AMP PEAK 23(15Q26.3) WILD-TYPE    133     75    167     34
D23V1, multiclass
        clus
vv       AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE
  CLUS_1                           45                            133
  CLUS_2                           27                             75
  CLUS_3                           22                            167
  CLUS_4                            8                             34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 23(15Q26.3) MUTATED        9     17     23     25      8     14
  AMP PEAK 23(15Q26.3) WILD-TYPE     73     59     73     62     70     60
                                vv
clus                             CLUS_7
  AMP PEAK 23(15Q26.3) MUTATED        6
  AMP PEAK 23(15Q26.3) WILD-TYPE     12
D23V2, multiclass
        clus
vv       AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE
  CLUS_1                            9                             73
  CLUS_2                           17                             59
  CLUS_3                           23                             73
  CLUS_4                           25                             62
  CLUS_5                            8                             70
  CLUS_6                           14                             60
  CLUS_7                            6                             12
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(15Q26.3) MUTATED       11     15      8     11
  AMP PEAK 23(15Q26.3) WILD-TYPE     42     36     29     54
D23V3, multiclass
        clus
vv       AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE
  CLUS_1                           11                             42
  CLUS_2                           15                             36
  CLUS_3                            8                             29
  CLUS_4                           11                             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(15Q26.3) MUTATED       17     21      7
  AMP PEAK 23(15Q26.3) WILD-TYPE     59     61     41
D23V4, multiclass
        clus
vv       AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE
  CLUS_1                           17                             59
  CLUS_2                           21                             61
  CLUS_3                            7                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(15Q26.3) MUTATED       37     28     33
  AMP PEAK 23(15Q26.3) WILD-TYPE    170    106    119
D23V5, multiclass
        clus
vv       AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE
  CLUS_1                           37                            170
  CLUS_2                           28                            106
  CLUS_3                           33                            119
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(15Q26.3) MUTATED        9     31     31     27
  AMP PEAK 23(15Q26.3) WILD-TYPE     42    126    124    103
D23V6, multiclass
        clus
vv       AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE
  CLUS_1                            9                             42
  CLUS_2                           31                            126
  CLUS_3                           31                            124
  CLUS_4                           27                            103
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(15Q26.3) MUTATED       24     49     27
  AMP PEAK 23(15Q26.3) WILD-TYPE    121    167    119
D23V7, multiclass
        clus
vv       AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE
  CLUS_1                           24                            121
  CLUS_2                           49                            167
  CLUS_3                           27                            119
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(15Q26.3) MUTATED       35     36     29
  AMP PEAK 23(15Q26.3) WILD-TYPE    163     88    156
D23V8, multiclass
        clus
vv       AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE
  CLUS_1                           35                            163
  CLUS_2                           36                             88
  CLUS_3                           29                            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(15Q26.3) MUTATED       33     34     24
  AMP PEAK 23(15Q26.3) WILD-TYPE    141    125    114
D23V9, multiclass
        clus
vv       AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE
  CLUS_1                           33                            141
  CLUS_2                           34                            125
  CLUS_3                           24                            114
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 23(15Q26.3) MUTATED       24     30      9     18     10
  AMP PEAK 23(15Q26.3) WILD-TYPE     75     98     70     90     47
D23V10, multiclass
        clus
vv       AMP PEAK 23(15Q26.3) MUTATED AMP PEAK 23(15Q26.3) WILD-TYPE
  CLUS_1                           24                             75
  CLUS_2                           30                             98
  CLUS_3                            9                             70
  CLUS_4                           18                             90
  CLUS_5                           10                             47
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(24) Variable = AMP PEAK 24(17Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(17Q12) MUTATED       42     27      9     10
  AMP PEAK 24(17Q12) WILD-TYPE    136     75    180     32
D24V1, multiclass
        clus
vv       AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE
  CLUS_1                         42                          136
  CLUS_2                         27                           75
  CLUS_3                          9                          180
  CLUS_4                         10                           32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 24(17Q12) MUTATED        6     19     21     29      6      6      1
  AMP PEAK 24(17Q12) WILD-TYPE     76     57     75     58     72     68     17
D24V2, multiclass
        clus
vv       AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE
  CLUS_1                          6                           76
  CLUS_2                         19                           57
  CLUS_3                         21                           75
  CLUS_4                         29                           58
  CLUS_5                          6                           72
  CLUS_6                          6                           68
  CLUS_7                          1                           17
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(17Q12) MUTATED        6     13      7      8
  AMP PEAK 24(17Q12) WILD-TYPE     47     38     30     57
D24V3, multiclass
        clus
vv       AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE
  CLUS_1                          6                           47
  CLUS_2                         13                           38
  CLUS_3                          7                           30
  CLUS_4                          8                           57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(17Q12) MUTATED       14     14      6
  AMP PEAK 24(17Q12) WILD-TYPE     62     68     42
D24V4, multiclass
        clus
vv       AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE
  CLUS_1                         14                           62
  CLUS_2                         14                           68
  CLUS_3                          6                           42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(17Q12) MUTATED       47     19     17
  AMP PEAK 24(17Q12) WILD-TYPE    160    115    135
D24V5, multiclass
        clus
vv       AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE
  CLUS_1                         47                          160
  CLUS_2                         19                          115
  CLUS_3                         17                          135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(17Q12) MUTATED       13     21     19     30
  AMP PEAK 24(17Q12) WILD-TYPE     38    136    136    100
D24V6, multiclass
        clus
vv       AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE
  CLUS_1                         13                           38
  CLUS_2                         21                          136
  CLUS_3                         19                          136
  CLUS_4                         30                          100
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(17Q12) MUTATED       18     50     19
  AMP PEAK 24(17Q12) WILD-TYPE    127    166    127
D24V7, multiclass
        clus
vv       AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE
  CLUS_1                         18                          127
  CLUS_2                         50                          166
  CLUS_3                         19                          127
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(17Q12) MUTATED       36     33     18
  AMP PEAK 24(17Q12) WILD-TYPE    162     91    167
D24V8, multiclass
        clus
vv       AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE
  CLUS_1                         36                          162
  CLUS_2                         33                           91
  CLUS_3                         18                          167
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(17Q12) MUTATED       31     28     25
  AMP PEAK 24(17Q12) WILD-TYPE    143    131    113
D24V9, multiclass
        clus
vv       AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE
  CLUS_1                         31                          143
  CLUS_2                         28                          131
  CLUS_3                         25                          113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 24(17Q12) MUTATED       18     33      5     17     11
  AMP PEAK 24(17Q12) WILD-TYPE     81     95     74     91     46
D24V10, multiclass
        clus
vv       AMP PEAK 24(17Q12) MUTATED AMP PEAK 24(17Q12) WILD-TYPE
  CLUS_1                         18                           81
  CLUS_2                         33                           95
  CLUS_3                          5                           74
  CLUS_4                         17                           91
  CLUS_5                         11                           46
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(25) Variable = AMP PEAK 25(18P11.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(18P11.31) MUTATED       73     53     19      7
  AMP PEAK 25(18P11.31) WILD-TYPE    105     49    170     35
D25V1, multiclass
        clus
vv       AMP PEAK 25(18P11.31) MUTATED AMP PEAK 25(18P11.31) WILD-TYPE
  CLUS_1                            73                             105
  CLUS_2                            53                              49
  CLUS_3                            19                             170
  CLUS_4                             7                              35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 25(18P11.31) MUTATED        9     43     33     32     21     10
  AMP PEAK 25(18P11.31) WILD-TYPE     73     33     63     55     57     64
                                 vv
clus                              CLUS_7
  AMP PEAK 25(18P11.31) MUTATED        4
  AMP PEAK 25(18P11.31) WILD-TYPE     14
D25V2, multiclass
        clus
vv       AMP PEAK 25(18P11.31) MUTATED AMP PEAK 25(18P11.31) WILD-TYPE
  CLUS_1                             9                              73
  CLUS_2                            43                              33
  CLUS_3                            33                              63
  CLUS_4                            32                              55
  CLUS_5                            21                              57
  CLUS_6                            10                              64
  CLUS_7                             4                              14
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(18P11.31) MUTATED       16     19     12     16
  AMP PEAK 25(18P11.31) WILD-TYPE     37     32     25     49
D25V3, multiclass
        clus
vv       AMP PEAK 25(18P11.31) MUTATED AMP PEAK 25(18P11.31) WILD-TYPE
  CLUS_1                            16                              37
  CLUS_2                            19                              32
  CLUS_3                            12                              25
  CLUS_4                            16                              49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(18P11.31) MUTATED       21     29     13
  AMP PEAK 25(18P11.31) WILD-TYPE     55     53     35
D25V4, multiclass
        clus
vv       AMP PEAK 25(18P11.31) MUTATED AMP PEAK 25(18P11.31) WILD-TYPE
  CLUS_1                            21                              55
  CLUS_2                            29                              53
  CLUS_3                            13                              35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(18P11.31) MUTATED       73     39     37
  AMP PEAK 25(18P11.31) WILD-TYPE    134     95    115
D25V5, multiclass
        clus
vv       AMP PEAK 25(18P11.31) MUTATED AMP PEAK 25(18P11.31) WILD-TYPE
  CLUS_1                            73                             134
  CLUS_2                            39                              95
  CLUS_3                            37                             115
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(18P11.31) MUTATED       35     45     30     39
  AMP PEAK 25(18P11.31) WILD-TYPE     16    112    125     91
D25V6, multiclass
        clus
vv       AMP PEAK 25(18P11.31) MUTATED AMP PEAK 25(18P11.31) WILD-TYPE
  CLUS_1                            35                              16
  CLUS_2                            45                             112
  CLUS_3                            30                             125
  CLUS_4                            39                              91
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(18P11.31) MUTATED       42     68     41
  AMP PEAK 25(18P11.31) WILD-TYPE    103    148    105
D25V7, multiclass
        clus
vv       AMP PEAK 25(18P11.31) MUTATED AMP PEAK 25(18P11.31) WILD-TYPE
  CLUS_1                            42                             103
  CLUS_2                            68                             148
  CLUS_3                            41                             105
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(18P11.31) MUTATED       54     54     43
  AMP PEAK 25(18P11.31) WILD-TYPE    144     70    142
D25V8, multiclass
        clus
vv       AMP PEAK 25(18P11.31) MUTATED AMP PEAK 25(18P11.31) WILD-TYPE
  CLUS_1                            54                             144
  CLUS_2                            54                              70
  CLUS_3                            43                             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(18P11.31) MUTATED       45     49     41
  AMP PEAK 25(18P11.31) WILD-TYPE    129    110     97
D25V9, multiclass
        clus
vv       AMP PEAK 25(18P11.31) MUTATED AMP PEAK 25(18P11.31) WILD-TYPE
  CLUS_1                            45                             129
  CLUS_2                            49                             110
  CLUS_3                            41                              97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 25(18P11.31) MUTATED       25     58     11     31     10
  AMP PEAK 25(18P11.31) WILD-TYPE     74     70     68     77     47
D25V10, multiclass
        clus
vv       AMP PEAK 25(18P11.31) MUTATED AMP PEAK 25(18P11.31) WILD-TYPE
  CLUS_1                            25                              74
  CLUS_2                            58                              70
  CLUS_3                            11                              68
  CLUS_4                            31                              77
  CLUS_5                            10                              47
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(26) Variable = AMP PEAK 26(18Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(18Q11.2) MUTATED       45     34     17      5
  AMP PEAK 26(18Q11.2) WILD-TYPE    133     68    172     37
D26V1, multiclass
        clus
vv       AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE
  CLUS_1                           45                            133
  CLUS_2                           34                             68
  CLUS_3                           17                            172
  CLUS_4                            5                             37
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 26(18Q11.2) MUTATED        5     22     24     24     17      6
  AMP PEAK 26(18Q11.2) WILD-TYPE     77     54     72     63     61     68
                                vv
clus                             CLUS_7
  AMP PEAK 26(18Q11.2) MUTATED        3
  AMP PEAK 26(18Q11.2) WILD-TYPE     15
D26V2, multiclass
        clus
vv       AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE
  CLUS_1                            5                             77
  CLUS_2                           22                             54
  CLUS_3                           24                             72
  CLUS_4                           24                             63
  CLUS_5                           17                             61
  CLUS_6                            6                             68
  CLUS_7                            3                             15
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(18Q11.2) MUTATED       13     13      5     13
  AMP PEAK 26(18Q11.2) WILD-TYPE     40     38     32     52
D26V3, multiclass
        clus
vv       AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE
  CLUS_1                           13                             40
  CLUS_2                           13                             38
  CLUS_3                            5                             32
  CLUS_4                           13                             52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(18Q11.2) MUTATED       17     21      6
  AMP PEAK 26(18Q11.2) WILD-TYPE     59     61     42
D26V4, multiclass
        clus
vv       AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE
  CLUS_1                           17                             59
  CLUS_2                           21                             61
  CLUS_3                            6                             42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(18Q11.2) MUTATED       47     22     30
  AMP PEAK 26(18Q11.2) WILD-TYPE    160    112    122
D26V5, multiclass
        clus
vv       AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE
  CLUS_1                           47                            160
  CLUS_2                           22                            112
  CLUS_3                           30                            122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(18Q11.2) MUTATED       16     25     24     34
  AMP PEAK 26(18Q11.2) WILD-TYPE     35    132    131     96
D26V6, multiclass
        clus
vv       AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE
  CLUS_1                           16                             35
  CLUS_2                           25                            132
  CLUS_3                           24                            131
  CLUS_4                           34                             96
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(18Q11.2) MUTATED       22     54     24
  AMP PEAK 26(18Q11.2) WILD-TYPE    123    162    122
D26V7, multiclass
        clus
vv       AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE
  CLUS_1                           22                            123
  CLUS_2                           54                            162
  CLUS_3                           24                            122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(18Q11.2) MUTATED       35     34     31
  AMP PEAK 26(18Q11.2) WILD-TYPE    163     90    154
D26V8, multiclass
        clus
vv       AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE
  CLUS_1                           35                            163
  CLUS_2                           34                             90
  CLUS_3                           31                            154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(18Q11.2) MUTATED       30     31     27
  AMP PEAK 26(18Q11.2) WILD-TYPE    144    128    111
D26V9, multiclass
        clus
vv       AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE
  CLUS_1                           30                            144
  CLUS_2                           31                            128
  CLUS_3                           27                            111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 26(18Q11.2) MUTATED       17     35      8     21      7
  AMP PEAK 26(18Q11.2) WILD-TYPE     82     93     71     87     50
D26V10, multiclass
        clus
vv       AMP PEAK 26(18Q11.2) MUTATED AMP PEAK 26(18Q11.2) WILD-TYPE
  CLUS_1                           17                             82
  CLUS_2                           35                             93
  CLUS_3                            8                             71
  CLUS_4                           21                             87
  CLUS_5                            7                             50
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(27) Variable = AMP PEAK 27(20P12.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(20P12.2) MUTATED       83     39     46     21
  AMP PEAK 27(20P12.2) WILD-TYPE     95     63    143     21
D27V1, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           83                             95
  CLUS_2                           39                             63
  CLUS_3                           46                            143
  CLUS_4                           21                             21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 27(20P12.2) MUTATED       28     24     54     38     21     16
  AMP PEAK 27(20P12.2) WILD-TYPE     54     52     42     49     57     58
                                vv
clus                             CLUS_7
  AMP PEAK 27(20P12.2) MUTATED        8
  AMP PEAK 27(20P12.2) WILD-TYPE     10
D27V2, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           28                             54
  CLUS_2                           24                             52
  CLUS_3                           54                             42
  CLUS_4                           38                             49
  CLUS_5                           21                             57
  CLUS_6                           16                             58
  CLUS_7                            8                             10
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(20P12.2) MUTATED       20     20     17     27
  AMP PEAK 27(20P12.2) WILD-TYPE     33     31     20     38
D27V3, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           20                             33
  CLUS_2                           20                             31
  CLUS_3                           17                             20
  CLUS_4                           27                             38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       32     32     20
  AMP PEAK 27(20P12.2) WILD-TYPE     44     50     28
D27V4, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           32                             44
  CLUS_2                           32                             50
  CLUS_3                           20                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       67     59     54
  AMP PEAK 27(20P12.2) WILD-TYPE    140     75     98
D27V5, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           67                            140
  CLUS_2                           59                             75
  CLUS_3                           54                             98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(20P12.2) MUTATED       14     73     55     38
  AMP PEAK 27(20P12.2) WILD-TYPE     37     84    100     92
D27V6, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           14                             37
  CLUS_2                           73                             84
  CLUS_3                           55                            100
  CLUS_4                           38                             92
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       49     76     64
  AMP PEAK 27(20P12.2) WILD-TYPE     96    140     82
D27V7, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           49                             96
  CLUS_2                           76                            140
  CLUS_3                           64                             82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       90     42     57
  AMP PEAK 27(20P12.2) WILD-TYPE    108     82    128
D27V8, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           90                            108
  CLUS_2                           42                             82
  CLUS_3                           57                            128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       68     45     59
  AMP PEAK 27(20P12.2) WILD-TYPE    106    114     79
D27V9, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           68                            106
  CLUS_2                           45                            114
  CLUS_3                           59                             79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 27(20P12.2) MUTATED       34     46     19     48     25
  AMP PEAK 27(20P12.2) WILD-TYPE     65     82     60     60     32
D27V10, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           34                             65
  CLUS_2                           46                             82
  CLUS_3                           19                             60
  CLUS_4                           48                             60
  CLUS_5                           25                             32
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(28) Variable = AMP PEAK 28(20Q11.22) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(20Q11.22) MUTATED       99     50     51     24
  AMP PEAK 28(20Q11.22) WILD-TYPE     79     52    138     18
D28V1, multiclass
        clus
vv       AMP PEAK 28(20Q11.22) MUTATED AMP PEAK 28(20Q11.22) WILD-TYPE
  CLUS_1                            99                              79
  CLUS_2                            50                              52
  CLUS_3                            51                             138
  CLUS_4                            24                              18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 28(20Q11.22) MUTATED       31     37     59     44     27     17
  AMP PEAK 28(20Q11.22) WILD-TYPE     51     39     37     43     51     57
                                 vv
clus                              CLUS_7
  AMP PEAK 28(20Q11.22) MUTATED        9
  AMP PEAK 28(20Q11.22) WILD-TYPE      9
D28V2, multiclass
        clus
vv       AMP PEAK 28(20Q11.22) MUTATED AMP PEAK 28(20Q11.22) WILD-TYPE
  CLUS_1                            31                              51
  CLUS_2                            37                              39
  CLUS_3                            59                              37
  CLUS_4                            44                              43
  CLUS_5                            27                              51
  CLUS_6                            17                              57
  CLUS_7                             9                               9
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(20Q11.22) MUTATED       25     25     18     24
  AMP PEAK 28(20Q11.22) WILD-TYPE     28     26     19     41
D28V3, multiclass
        clus
vv       AMP PEAK 28(20Q11.22) MUTATED AMP PEAK 28(20Q11.22) WILD-TYPE
  CLUS_1                            25                              28
  CLUS_2                            25                              26
  CLUS_3                            18                              19
  CLUS_4                            24                              41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.22) MUTATED       36     35     21
  AMP PEAK 28(20Q11.22) WILD-TYPE     40     47     27
D28V4, multiclass
        clus
vv       AMP PEAK 28(20Q11.22) MUTATED AMP PEAK 28(20Q11.22) WILD-TYPE
  CLUS_1                            36                              40
  CLUS_2                            35                              47
  CLUS_3                            21                              27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.22) MUTATED       88     69     60
  AMP PEAK 28(20Q11.22) WILD-TYPE    119     65     92
D28V5, multiclass
        clus
vv       AMP PEAK 28(20Q11.22) MUTATED AMP PEAK 28(20Q11.22) WILD-TYPE
  CLUS_1                            88                             119
  CLUS_2                            69                              65
  CLUS_3                            60                              92
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(20Q11.22) MUTATED       25     84     62     46
  AMP PEAK 28(20Q11.22) WILD-TYPE     26     73     93     84
D28V6, multiclass
        clus
vv       AMP PEAK 28(20Q11.22) MUTATED AMP PEAK 28(20Q11.22) WILD-TYPE
  CLUS_1                            25                              26
  CLUS_2                            84                              73
  CLUS_3                            62                              93
  CLUS_4                            46                              84
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.22) MUTATED       60     92     70
  AMP PEAK 28(20Q11.22) WILD-TYPE     85    124     76
D28V7, multiclass
        clus
vv       AMP PEAK 28(20Q11.22) MUTATED AMP PEAK 28(20Q11.22) WILD-TYPE
  CLUS_1                            60                              85
  CLUS_2                            92                             124
  CLUS_3                            70                              76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.22) MUTATED      101     53     68
  AMP PEAK 28(20Q11.22) WILD-TYPE     97     71    117
D28V8, multiclass
        clus
vv       AMP PEAK 28(20Q11.22) MUTATED AMP PEAK 28(20Q11.22) WILD-TYPE
  CLUS_1                           101                              97
  CLUS_2                            53                              71
  CLUS_3                            68                             117
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.22) MUTATED       78     60     65
  AMP PEAK 28(20Q11.22) WILD-TYPE     96     99     73
D28V9, multiclass
        clus
vv       AMP PEAK 28(20Q11.22) MUTATED AMP PEAK 28(20Q11.22) WILD-TYPE
  CLUS_1                            78                              96
  CLUS_2                            60                              99
  CLUS_3                            65                              73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 28(20Q11.22) MUTATED       39     50     28     55     31
  AMP PEAK 28(20Q11.22) WILD-TYPE     60     78     51     53     26
D28V10, multiclass
        clus
vv       AMP PEAK 28(20Q11.22) MUTATED AMP PEAK 28(20Q11.22) WILD-TYPE
  CLUS_1                            39                              60
  CLUS_2                            50                              78
  CLUS_3                            28                              51
  CLUS_4                            55                              53
  CLUS_5                            31                              26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(29) Variable = AMP PEAK 29(XQ28) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(XQ28) MUTATED       83     23     28     11
  AMP PEAK 29(XQ28) WILD-TYPE     95     79    161     31
D29V1, multiclass
        clus
vv       AMP PEAK 29(XQ28) MUTATED AMP PEAK 29(XQ28) WILD-TYPE
  CLUS_1                        83                          95
  CLUS_2                        23                          79
  CLUS_3                        28                         161
  CLUS_4                        11                          31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 29(XQ28) MUTATED       11     19     42     34     20     12      7
  AMP PEAK 29(XQ28) WILD-TYPE     71     57     54     53     58     62     11
D29V2, multiclass
        clus
vv       AMP PEAK 29(XQ28) MUTATED AMP PEAK 29(XQ28) WILD-TYPE
  CLUS_1                        11                          71
  CLUS_2                        19                          57
  CLUS_3                        42                          54
  CLUS_4                        34                          53
  CLUS_5                        20                          58
  CLUS_6                        12                          62
  CLUS_7                         7                          11
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(XQ28) MUTATED       13     15     12     23
  AMP PEAK 29(XQ28) WILD-TYPE     40     36     25     42
D29V3, multiclass
        clus
vv       AMP PEAK 29(XQ28) MUTATED AMP PEAK 29(XQ28) WILD-TYPE
  CLUS_1                        13                          40
  CLUS_2                        15                          36
  CLUS_3                        12                          25
  CLUS_4                        23                          42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(XQ28) MUTATED       20     31     12
  AMP PEAK 29(XQ28) WILD-TYPE     56     51     36
D29V4, multiclass
        clus
vv       AMP PEAK 29(XQ28) MUTATED AMP PEAK 29(XQ28) WILD-TYPE
  CLUS_1                        20                          56
  CLUS_2                        31                          51
  CLUS_3                        12                          36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(XQ28) MUTATED       54     45     41
  AMP PEAK 29(XQ28) WILD-TYPE    153     89    111
D29V5, multiclass
        clus
vv       AMP PEAK 29(XQ28) MUTATED AMP PEAK 29(XQ28) WILD-TYPE
  CLUS_1                        54                         153
  CLUS_2                        45                          89
  CLUS_3                        41                         111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(XQ28) MUTATED       12     54     36     38
  AMP PEAK 29(XQ28) WILD-TYPE     39    103    119     92
D29V6, multiclass
        clus
vv       AMP PEAK 29(XQ28) MUTATED AMP PEAK 29(XQ28) WILD-TYPE
  CLUS_1                        12                          39
  CLUS_2                        54                         103
  CLUS_3                        36                         119
  CLUS_4                        38                          92
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(XQ28) MUTATED       33     60     48
  AMP PEAK 29(XQ28) WILD-TYPE    112    156     98
D29V7, multiclass
        clus
vv       AMP PEAK 29(XQ28) MUTATED AMP PEAK 29(XQ28) WILD-TYPE
  CLUS_1                        33                         112
  CLUS_2                        60                         156
  CLUS_3                        48                          98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(XQ28) MUTATED       65     37     39
  AMP PEAK 29(XQ28) WILD-TYPE    133     87    146
D29V8, multiclass
        clus
vv       AMP PEAK 29(XQ28) MUTATED AMP PEAK 29(XQ28) WILD-TYPE
  CLUS_1                        65                         133
  CLUS_2                        37                          87
  CLUS_3                        39                         146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(XQ28) MUTATED       48     45     40
  AMP PEAK 29(XQ28) WILD-TYPE    126    114     98
D29V9, multiclass
        clus
vv       AMP PEAK 29(XQ28) MUTATED AMP PEAK 29(XQ28) WILD-TYPE
  CLUS_1                        48                         126
  CLUS_2                        45                         114
  CLUS_3                        40                          98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 29(XQ28) MUTATED       32     38     11     36     16
  AMP PEAK 29(XQ28) WILD-TYPE     67     90     68     72     41
D29V10, multiclass
        clus
vv       AMP PEAK 29(XQ28) MUTATED AMP PEAK 29(XQ28) WILD-TYPE
  CLUS_1                        32                          67
  CLUS_2                        38                          90
  CLUS_3                        11                          68
  CLUS_4                        36                          72
  CLUS_5                        16                          41
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(30) Variable = DEL PEAK  1(1P36.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.21) MUTATED       33     41     13      7
  DEL PEAK  1(1P36.21) WILD-TYPE    145     61    176     35
D30V1, multiclass
        clus
vv       DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                           33                            145
  CLUS_2                           41                             61
  CLUS_3                           13                            176
  CLUS_4                            7                             35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  1(1P36.21) MUTATED        4     16      8     48      8      8
  DEL PEAK  1(1P36.21) WILD-TYPE     78     60     88     39     70     66
                                vv
clus                             CLUS_7
  DEL PEAK  1(1P36.21) MUTATED        2
  DEL PEAK  1(1P36.21) WILD-TYPE     16
D30V2, multiclass
        clus
vv       DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                            4                             78
  CLUS_2                           16                             60
  CLUS_3                            8                             88
  CLUS_4                           48                             39
  CLUS_5                            8                             70
  CLUS_6                            8                             66
  CLUS_7                            2                             16
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.21) MUTATED        9     22      4     10
  DEL PEAK  1(1P36.21) WILD-TYPE     44     29     33     55
D30V3, multiclass
        clus
vv       DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                            9                             44
  CLUS_2                           22                             29
  CLUS_3                            4                             33
  CLUS_4                           10                             55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.21) MUTATED       15     26      4
  DEL PEAK  1(1P36.21) WILD-TYPE     61     56     44
D30V4, multiclass
        clus
vv       DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                           15                             61
  CLUS_2                           26                             56
  CLUS_3                            4                             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.21) MUTATED       60     21     11
  DEL PEAK  1(1P36.21) WILD-TYPE    147    113    141
D30V5, multiclass
        clus
vv       DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                           60                            147
  CLUS_2                           21                            113
  CLUS_3                           11                            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.21) MUTATED       11     26     15     40
  DEL PEAK  1(1P36.21) WILD-TYPE     40    131    140     90
D30V6, multiclass
        clus
vv       DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                           11                             40
  CLUS_2                           26                            131
  CLUS_3                           15                            140
  CLUS_4                           40                             90
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.21) MUTATED       19     55     17
  DEL PEAK  1(1P36.21) WILD-TYPE    126    161    129
D30V7, multiclass
        clus
vv       DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                           19                            126
  CLUS_2                           55                            161
  CLUS_3                           17                            129
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.21) MUTATED       30     31     30
  DEL PEAK  1(1P36.21) WILD-TYPE    168     93    155
D30V8, multiclass
        clus
vv       DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                           30                            168
  CLUS_2                           31                             93
  CLUS_3                           30                            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.21) MUTATED       23     38     24
  DEL PEAK  1(1P36.21) WILD-TYPE    151    121    114
D30V9, multiclass
        clus
vv       DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                           23                            151
  CLUS_2                           38                            121
  CLUS_3                           24                            114
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.21) MUTATED       10     44      7     19      5
  DEL PEAK  1(1P36.21) WILD-TYPE     89     84     72     89     52
D30V10, multiclass
        clus
vv       DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                           10                             89
  CLUS_2                           44                             84
  CLUS_3                            7                             72
  CLUS_4                           19                             89
  CLUS_5                            5                             52
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(31) Variable = DEL PEAK  2(1P13.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.2) MUTATED       55     49     12     11
  DEL PEAK  2(1P13.2) WILD-TYPE    123     53    177     31
D31V1, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          55                           123
  CLUS_2                          49                            53
  CLUS_3                          12                           177
  CLUS_4                          11                            31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  2(1P13.2) MUTATED       12     24     20     52      6      7
  DEL PEAK  2(1P13.2) WILD-TYPE     70     52     76     35     72     67
                               vv
clus                            CLUS_7
  DEL PEAK  2(1P13.2) MUTATED        6
  DEL PEAK  2(1P13.2) WILD-TYPE     12
D31V2, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          12                            70
  CLUS_2                          24                            52
  CLUS_3                          20                            76
  CLUS_4                          52                            35
  CLUS_5                           6                            72
  CLUS_6                           7                            67
  CLUS_7                           6                            12
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.2) MUTATED        8     21     10     21
  DEL PEAK  2(1P13.2) WILD-TYPE     45     30     27     44
D31V3, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                           8                            45
  CLUS_2                          21                            30
  CLUS_3                          10                            27
  CLUS_4                          21                            44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       17     34      9
  DEL PEAK  2(1P13.2) WILD-TYPE     59     48     39
D31V4, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          17                            59
  CLUS_2                          34                            48
  CLUS_3                           9                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       64     33     28
  DEL PEAK  2(1P13.2) WILD-TYPE    143    101    124
D31V5, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          64                           143
  CLUS_2                          33                           101
  CLUS_3                          28                           124
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.2) MUTATED       15     41     32     37
  DEL PEAK  2(1P13.2) WILD-TYPE     36    116    123     93
D31V6, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          15                            36
  CLUS_2                          41                           116
  CLUS_3                          32                           123
  CLUS_4                          37                            93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       29     67     29
  DEL PEAK  2(1P13.2) WILD-TYPE    116    149    117
D31V7, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          29                           116
  CLUS_2                          67                           149
  CLUS_3                          29                           117
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       49     45     31
  DEL PEAK  2(1P13.2) WILD-TYPE    149     79    154
D31V8, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          49                           149
  CLUS_2                          45                            79
  CLUS_3                          31                           154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       34     47     36
  DEL PEAK  2(1P13.2) WILD-TYPE    140    112    102
D31V9, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          34                           140
  CLUS_2                          47                           112
  CLUS_3                          36                           102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(1P13.2) MUTATED       16     52      9     30     10
  DEL PEAK  2(1P13.2) WILD-TYPE     83     76     70     78     47
D31V10, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          16                            83
  CLUS_2                          52                            76
  CLUS_3                           9                            70
  CLUS_4                          30                            78
  CLUS_5                          10                            47
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(32) Variable = DEL PEAK  3(1Q44) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(1Q44) MUTATED       26      6      8      7
  DEL PEAK  3(1Q44) WILD-TYPE    152     96    181     35
D32V1, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                        26                         152
  CLUS_2                         6                          96
  CLUS_3                         8                         181
  CLUS_4                         7                          35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK  3(1Q44) MUTATED        7      6     16      7      1      7      3
  DEL PEAK  3(1Q44) WILD-TYPE     75     70     80     80     77     67     15
D32V2, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         7                          75
  CLUS_2                         6                          70
  CLUS_3                        16                          80
  CLUS_4                         7                          80
  CLUS_5                         1                          77
  CLUS_6                         7                          67
  CLUS_7                         3                          15
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(1Q44) MUTATED        5      4      2      8
  DEL PEAK  3(1Q44) WILD-TYPE     48     47     35     57
D32V3, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         5                          48
  CLUS_2                         4                          47
  CLUS_3                         2                          35
  CLUS_4                         8                          57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED        8      7      4
  DEL PEAK  3(1Q44) WILD-TYPE     68     75     44
D32V4, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         8                          68
  CLUS_2                         7                          75
  CLUS_3                         4                          44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED       10     17     18
  DEL PEAK  3(1Q44) WILD-TYPE    197    117    134
D32V5, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                        10                         197
  CLUS_2                        17                         117
  CLUS_3                        18                         134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(1Q44) MUTATED        5     21     16      3
  DEL PEAK  3(1Q44) WILD-TYPE     46    136    139    127
D32V6, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         5                          46
  CLUS_2                        21                         136
  CLUS_3                        16                         139
  CLUS_4                         3                         127
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED       21      8     17
  DEL PEAK  3(1Q44) WILD-TYPE    124    208    129
D32V7, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                        21                         124
  CLUS_2                         8                         208
  CLUS_3                        17                         129
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED       25     11     10
  DEL PEAK  3(1Q44) WILD-TYPE    173    113    175
D32V8, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                        25                         173
  CLUS_2                        11                         113
  CLUS_3                        10                         175
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED       22      7     14
  DEL PEAK  3(1Q44) WILD-TYPE    152    152    124
D32V9, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                        22                         152
  CLUS_2                         7                         152
  CLUS_3                        14                         124
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(1Q44) MUTATED        8      9      7      9     10
  DEL PEAK  3(1Q44) WILD-TYPE     91    119     72     99     47
D32V10, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         8                          91
  CLUS_2                         9                         119
  CLUS_3                         7                          72
  CLUS_4                         9                          99
  CLUS_5                        10                          47
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(33) Variable = DEL PEAK  4(2Q21.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q21.2) MUTATED       29     13     25      6
  DEL PEAK  4(2Q21.2) WILD-TYPE    149     89    164     36
D33V1, multiclass
        clus
vv       DEL PEAK  4(2Q21.2) MUTATED DEL PEAK  4(2Q21.2) WILD-TYPE
  CLUS_1                          29                           149
  CLUS_2                          13                            89
  CLUS_3                          25                           164
  CLUS_4                           6                            36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  4(2Q21.2) MUTATED        5      6     19     14      9     18
  DEL PEAK  4(2Q21.2) WILD-TYPE     77     70     77     73     69     56
                               vv
clus                            CLUS_7
  DEL PEAK  4(2Q21.2) MUTATED        2
  DEL PEAK  4(2Q21.2) WILD-TYPE     16
D33V2, multiclass
        clus
vv       DEL PEAK  4(2Q21.2) MUTATED DEL PEAK  4(2Q21.2) WILD-TYPE
  CLUS_1                           5                            77
  CLUS_2                           6                            70
  CLUS_3                          19                            77
  CLUS_4                          14                            73
  CLUS_5                           9                            69
  CLUS_6                          18                            56
  CLUS_7                           2                            16
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q21.2) MUTATED        6      5      5     11
  DEL PEAK  4(2Q21.2) WILD-TYPE     47     46     32     54
D33V3, multiclass
        clus
vv       DEL PEAK  4(2Q21.2) MUTATED DEL PEAK  4(2Q21.2) WILD-TYPE
  CLUS_1                           6                            47
  CLUS_2                           5                            46
  CLUS_3                           5                            32
  CLUS_4                          11                            54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q21.2) MUTATED       11      7      9
  DEL PEAK  4(2Q21.2) WILD-TYPE     65     75     39
D33V4, multiclass
        clus
vv       DEL PEAK  4(2Q21.2) MUTATED DEL PEAK  4(2Q21.2) WILD-TYPE
  CLUS_1                          11                            65
  CLUS_2                           7                            75
  CLUS_3                           9                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q21.2) MUTATED       23     13     30
  DEL PEAK  4(2Q21.2) WILD-TYPE    184    121    122
D33V5, multiclass
        clus
vv       DEL PEAK  4(2Q21.2) MUTATED DEL PEAK  4(2Q21.2) WILD-TYPE
  CLUS_1                          23                           184
  CLUS_2                          13                           121
  CLUS_3                          30                           122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q21.2) MUTATED        2     19     32     13
  DEL PEAK  4(2Q21.2) WILD-TYPE     49    138    123    117
D33V6, multiclass
        clus
vv       DEL PEAK  4(2Q21.2) MUTATED DEL PEAK  4(2Q21.2) WILD-TYPE
  CLUS_1                           2                            49
  CLUS_2                          19                           138
  CLUS_3                          32                           123
  CLUS_4                          13                           117
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q21.2) MUTATED       34     28     10
  DEL PEAK  4(2Q21.2) WILD-TYPE    111    188    136
D33V7, multiclass
        clus
vv       DEL PEAK  4(2Q21.2) MUTATED DEL PEAK  4(2Q21.2) WILD-TYPE
  CLUS_1                          34                           111
  CLUS_2                          28                           188
  CLUS_3                          10                           136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q21.2) MUTATED       25     24     23
  DEL PEAK  4(2Q21.2) WILD-TYPE    173    100    162
D33V8, multiclass
        clus
vv       DEL PEAK  4(2Q21.2) MUTATED DEL PEAK  4(2Q21.2) WILD-TYPE
  CLUS_1                          25                           173
  CLUS_2                          24                           100
  CLUS_3                          23                           162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q21.2) MUTATED       31     21     12
  DEL PEAK  4(2Q21.2) WILD-TYPE    143    138    126
D33V9, multiclass
        clus
vv       DEL PEAK  4(2Q21.2) MUTATED DEL PEAK  4(2Q21.2) WILD-TYPE
  CLUS_1                          31                           143
  CLUS_2                          21                           138
  CLUS_3                          12                           126
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(2Q21.2) MUTATED       19     14     10      9     12
  DEL PEAK  4(2Q21.2) WILD-TYPE     80    114     69     99     45
D33V10, multiclass
        clus
vv       DEL PEAK  4(2Q21.2) MUTATED DEL PEAK  4(2Q21.2) WILD-TYPE
  CLUS_1                          19                            80
  CLUS_2                          14                           114
  CLUS_3                          10                            69
  CLUS_4                           9                            99
  CLUS_5                          12                            45
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(34) Variable = DEL PEAK  5(2Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q22.1) MUTATED       45     29     31      9
  DEL PEAK  5(2Q22.1) WILD-TYPE    133     73    158     33
D34V1, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          45                           133
  CLUS_2                          29                            73
  CLUS_3                          31                           158
  CLUS_4                           9                            33
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  5(2Q22.1) MUTATED        9     14     23     34     11     22
  DEL PEAK  5(2Q22.1) WILD-TYPE     73     62     73     53     67     52
                               vv
clus                            CLUS_7
  DEL PEAK  5(2Q22.1) MUTATED        1
  DEL PEAK  5(2Q22.1) WILD-TYPE     17
D34V2, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                           9                            73
  CLUS_2                          14                            62
  CLUS_3                          23                            73
  CLUS_4                          34                            53
  CLUS_5                          11                            67
  CLUS_6                          22                            52
  CLUS_7                           1                            17
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q22.1) MUTATED       10     15      6     11
  DEL PEAK  5(2Q22.1) WILD-TYPE     43     36     31     54
D34V3, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          10                            43
  CLUS_2                          15                            36
  CLUS_3                           6                            31
  CLUS_4                          11                            54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q22.1) MUTATED       14     17     11
  DEL PEAK  5(2Q22.1) WILD-TYPE     62     65     37
D34V4, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          14                            62
  CLUS_2                          17                            65
  CLUS_3                          11                            37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q22.1) MUTATED       44     25     40
  DEL PEAK  5(2Q22.1) WILD-TYPE    163    109    112
D34V5, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          44                           163
  CLUS_2                          25                           109
  CLUS_3                          40                           112
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q22.1) MUTATED        8     29     38     34
  DEL PEAK  5(2Q22.1) WILD-TYPE     43    128    117     96
D34V6, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                           8                            43
  CLUS_2                          29                           128
  CLUS_3                          38                           117
  CLUS_4                          34                            96
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q22.1) MUTATED       36     53     25
  DEL PEAK  5(2Q22.1) WILD-TYPE    109    163    121
D34V7, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          36                           109
  CLUS_2                          53                           163
  CLUS_3                          25                           121
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q22.1) MUTATED       42     40     32
  DEL PEAK  5(2Q22.1) WILD-TYPE    156     84    153
D34V8, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          42                           156
  CLUS_2                          40                            84
  CLUS_3                          32                           153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q22.1) MUTATED       39     37     29
  DEL PEAK  5(2Q22.1) WILD-TYPE    135    122    109
D34V9, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          39                           135
  CLUS_2                          37                           122
  CLUS_3                          29                           109
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(2Q22.1) MUTATED       22     38     12     20     13
  DEL PEAK  5(2Q22.1) WILD-TYPE     77     90     67     88     44
D34V10, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          22                            77
  CLUS_2                          38                            90
  CLUS_3                          12                            67
  CLUS_4                          20                            88
  CLUS_5                          13                            44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(35) Variable = DEL PEAK  6(2Q36.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(2Q36.2) MUTATED       58     51     31     12
  DEL PEAK  6(2Q36.2) WILD-TYPE    120     51    158     30
D35V1, multiclass
        clus
vv       DEL PEAK  6(2Q36.2) MUTATED DEL PEAK  6(2Q36.2) WILD-TYPE
  CLUS_1                          58                           120
  CLUS_2                          51                            51
  CLUS_3                          31                           158
  CLUS_4                          12                            30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  6(2Q36.2) MUTATED        6     24     26     46     24     21
  DEL PEAK  6(2Q36.2) WILD-TYPE     76     52     70     41     54     53
                               vv
clus                            CLUS_7
  DEL PEAK  6(2Q36.2) MUTATED        5
  DEL PEAK  6(2Q36.2) WILD-TYPE     13
D35V2, multiclass
        clus
vv       DEL PEAK  6(2Q36.2) MUTATED DEL PEAK  6(2Q36.2) WILD-TYPE
  CLUS_1                           6                            76
  CLUS_2                          24                            52
  CLUS_3                          26                            70
  CLUS_4                          46                            41
  CLUS_5                          24                            54
  CLUS_6                          21                            53
  CLUS_7                           5                            13
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(2Q36.2) MUTATED       15     23      8     18
  DEL PEAK  6(2Q36.2) WILD-TYPE     38     28     29     47
D35V3, multiclass
        clus
vv       DEL PEAK  6(2Q36.2) MUTATED DEL PEAK  6(2Q36.2) WILD-TYPE
  CLUS_1                          15                            38
  CLUS_2                          23                            28
  CLUS_3                           8                            29
  CLUS_4                          18                            47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(2Q36.2) MUTATED       22     27     15
  DEL PEAK  6(2Q36.2) WILD-TYPE     54     55     33
D35V4, multiclass
        clus
vv       DEL PEAK  6(2Q36.2) MUTATED DEL PEAK  6(2Q36.2) WILD-TYPE
  CLUS_1                          22                            54
  CLUS_2                          27                            55
  CLUS_3                          15                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(2Q36.2) MUTATED       76     31     38
  DEL PEAK  6(2Q36.2) WILD-TYPE    131    103    114
D35V5, multiclass
        clus
vv       DEL PEAK  6(2Q36.2) MUTATED DEL PEAK  6(2Q36.2) WILD-TYPE
  CLUS_1                          76                           131
  CLUS_2                          31                           103
  CLUS_3                          38                           114
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(2Q36.2) MUTATED       14     39     39     53
  DEL PEAK  6(2Q36.2) WILD-TYPE     37    118    116     77
D35V6, multiclass
        clus
vv       DEL PEAK  6(2Q36.2) MUTATED DEL PEAK  6(2Q36.2) WILD-TYPE
  CLUS_1                          14                            37
  CLUS_2                          39                           118
  CLUS_3                          39                           116
  CLUS_4                          53                            77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(2Q36.2) MUTATED       45     71     33
  DEL PEAK  6(2Q36.2) WILD-TYPE    100    145    113
D35V7, multiclass
        clus
vv       DEL PEAK  6(2Q36.2) MUTATED DEL PEAK  6(2Q36.2) WILD-TYPE
  CLUS_1                          45                           100
  CLUS_2                          71                           145
  CLUS_3                          33                           113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(2Q36.2) MUTATED       54     48     47
  DEL PEAK  6(2Q36.2) WILD-TYPE    144     76    138
D35V8, multiclass
        clus
vv       DEL PEAK  6(2Q36.2) MUTATED DEL PEAK  6(2Q36.2) WILD-TYPE
  CLUS_1                          54                           144
  CLUS_2                          48                            76
  CLUS_3                          47                           138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(2Q36.2) MUTATED       50     55     33
  DEL PEAK  6(2Q36.2) WILD-TYPE    124    104    105
D35V9, multiclass
        clus
vv       DEL PEAK  6(2Q36.2) MUTATED DEL PEAK  6(2Q36.2) WILD-TYPE
  CLUS_1                          50                           124
  CLUS_2                          55                           104
  CLUS_3                          33                           105
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(2Q36.2) MUTATED       25     53     16     27     17
  DEL PEAK  6(2Q36.2) WILD-TYPE     74     75     63     81     40
D35V10, multiclass
        clus
vv       DEL PEAK  6(2Q36.2) MUTATED DEL PEAK  6(2Q36.2) WILD-TYPE
  CLUS_1                          25                            74
  CLUS_2                          53                            75
  CLUS_3                          16                            63
  CLUS_4                          27                            81
  CLUS_5                          17                            40
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(36) Variable = DEL PEAK  7(3P24.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P24.1) MUTATED      164     89     74     30
  DEL PEAK  7(3P24.1) WILD-TYPE     14     13    115     12
D36V1, multiclass
        clus
vv       DEL PEAK  7(3P24.1) MUTATED DEL PEAK  7(3P24.1) WILD-TYPE
  CLUS_1                         164                            14
  CLUS_2                          89                            13
  CLUS_3                          74                           115
  CLUS_4                          30                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  7(3P24.1) MUTATED       49     68     87     77     29     30
  DEL PEAK  7(3P24.1) WILD-TYPE     33      8      9     10     49     44
                               vv
clus                            CLUS_7
  DEL PEAK  7(3P24.1) MUTATED       17
  DEL PEAK  7(3P24.1) WILD-TYPE      1
D36V2, multiclass
        clus
vv       DEL PEAK  7(3P24.1) MUTATED DEL PEAK  7(3P24.1) WILD-TYPE
  CLUS_1                          49                            33
  CLUS_2                          68                             8
  CLUS_3                          87                             9
  CLUS_4                          77                            10
  CLUS_5                          29                            49
  CLUS_6                          30                            44
  CLUS_7                          17                             1
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P24.1) MUTATED       38     41     26     53
  DEL PEAK  7(3P24.1) WILD-TYPE     15     10     11     12
D36V3, multiclass
        clus
vv       DEL PEAK  7(3P24.1) MUTATED DEL PEAK  7(3P24.1) WILD-TYPE
  CLUS_1                          38                            15
  CLUS_2                          41                            10
  CLUS_3                          26                            11
  CLUS_4                          53                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P24.1) MUTATED       54     69     35
  DEL PEAK  7(3P24.1) WILD-TYPE     22     13     13
D36V4, multiclass
        clus
vv       DEL PEAK  7(3P24.1) MUTATED DEL PEAK  7(3P24.1) WILD-TYPE
  CLUS_1                          54                            22
  CLUS_2                          69                            13
  CLUS_3                          35                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P24.1) MUTATED      138    110     99
  DEL PEAK  7(3P24.1) WILD-TYPE     69     24     53
D36V5, multiclass
        clus
vv       DEL PEAK  7(3P24.1) MUTATED DEL PEAK  7(3P24.1) WILD-TYPE
  CLUS_1                         138                            69
  CLUS_2                         110                            24
  CLUS_3                          99                            53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P24.1) MUTATED       46    124    100     77
  DEL PEAK  7(3P24.1) WILD-TYPE      5     33     55     53
D36V6, multiclass
        clus
vv       DEL PEAK  7(3P24.1) MUTATED DEL PEAK  7(3P24.1) WILD-TYPE
  CLUS_1                          46                             5
  CLUS_2                         124                            33
  CLUS_3                         100                            55
  CLUS_4                          77                            53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P24.1) MUTATED       87    156    111
  DEL PEAK  7(3P24.1) WILD-TYPE     58     60     35
D36V7, multiclass
        clus
vv       DEL PEAK  7(3P24.1) MUTATED DEL PEAK  7(3P24.1) WILD-TYPE
  CLUS_1                          87                            58
  CLUS_2                         156                            60
  CLUS_3                         111                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P24.1) MUTATED      154     96    104
  DEL PEAK  7(3P24.1) WILD-TYPE     44     28     81
D36V8, multiclass
        clus
vv       DEL PEAK  7(3P24.1) MUTATED DEL PEAK  7(3P24.1) WILD-TYPE
  CLUS_1                         154                            44
  CLUS_2                          96                            28
  CLUS_3                         104                            81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P24.1) MUTATED      112    111    104
  DEL PEAK  7(3P24.1) WILD-TYPE     62     48     34
D36V9, multiclass
        clus
vv       DEL PEAK  7(3P24.1) MUTATED DEL PEAK  7(3P24.1) WILD-TYPE
  CLUS_1                         112                            62
  CLUS_2                         111                            48
  CLUS_3                         104                            34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(3P24.1) MUTATED       64    101     35     85     42
  DEL PEAK  7(3P24.1) WILD-TYPE     35     27     44     23     15
D36V10, multiclass
        clus
vv       DEL PEAK  7(3P24.1) MUTATED DEL PEAK  7(3P24.1) WILD-TYPE
  CLUS_1                          64                            35
  CLUS_2                         101                            27
  CLUS_3                          35                            44
  CLUS_4                          85                            23
  CLUS_5                          42                            15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(37) Variable = DEL PEAK  8(3P12.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P12.1) MUTATED      157     86     60     29
  DEL PEAK  8(3P12.1) WILD-TYPE     21     16    129     13
D37V1, multiclass
        clus
vv       DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE
  CLUS_1                         157                            21
  CLUS_2                          86                            16
  CLUS_3                          60                           129
  CLUS_4                          29                            13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  8(3P12.1) MUTATED       45     66     77     78     24     26
  DEL PEAK  8(3P12.1) WILD-TYPE     37     10     19      9     54     48
                               vv
clus                            CLUS_7
  DEL PEAK  8(3P12.1) MUTATED       16
  DEL PEAK  8(3P12.1) WILD-TYPE      2
D37V2, multiclass
        clus
vv       DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE
  CLUS_1                          45                            37
  CLUS_2                          66                            10
  CLUS_3                          77                            19
  CLUS_4                          78                             9
  CLUS_5                          24                            54
  CLUS_6                          26                            48
  CLUS_7                          16                             2
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P12.1) MUTATED       38     38     25     49
  DEL PEAK  8(3P12.1) WILD-TYPE     15     13     12     16
D37V3, multiclass
        clus
vv       DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE
  CLUS_1                          38                            15
  CLUS_2                          38                            13
  CLUS_3                          25                            12
  CLUS_4                          49                            16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.1) MUTATED       54     61     35
  DEL PEAK  8(3P12.1) WILD-TYPE     22     21     13
D37V4, multiclass
        clus
vv       DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE
  CLUS_1                          54                            22
  CLUS_2                          61                            21
  CLUS_3                          35                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.1) MUTATED      134    100     90
  DEL PEAK  8(3P12.1) WILD-TYPE     73     34     62
D37V5, multiclass
        clus
vv       DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE
  CLUS_1                         134                            73
  CLUS_2                         100                            34
  CLUS_3                          90                            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P12.1) MUTATED       45    114     92     73
  DEL PEAK  8(3P12.1) WILD-TYPE      6     43     63     57
D37V6, multiclass
        clus
vv       DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE
  CLUS_1                          45                             6
  CLUS_2                         114                            43
  CLUS_3                          92                            63
  CLUS_4                          73                            57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.1) MUTATED       83    146    100
  DEL PEAK  8(3P12.1) WILD-TYPE     62     70     46
D37V7, multiclass
        clus
vv       DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE
  CLUS_1                          83                            62
  CLUS_2                         146                            70
  CLUS_3                         100                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.1) MUTATED      139     92     98
  DEL PEAK  8(3P12.1) WILD-TYPE     59     32     87
D37V8, multiclass
        clus
vv       DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE
  CLUS_1                         139                            59
  CLUS_2                          92                            32
  CLUS_3                          98                            87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.1) MUTATED      106    101     95
  DEL PEAK  8(3P12.1) WILD-TYPE     68     58     43
D37V9, multiclass
        clus
vv       DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE
  CLUS_1                         106                            68
  CLUS_2                         101                            58
  CLUS_3                          95                            43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(3P12.1) MUTATED       62    101     29     75     35
  DEL PEAK  8(3P12.1) WILD-TYPE     37     27     50     33     22
D37V10, multiclass
        clus
vv       DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE
  CLUS_1                          62                            37
  CLUS_2                         101                            27
  CLUS_3                          29                            50
  CLUS_4                          75                            33
  CLUS_5                          35                            22
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(38) Variable = DEL PEAK  9(4P15.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(4P15.2) MUTATED       88     67     32     14
  DEL PEAK  9(4P15.2) WILD-TYPE     90     35    157     28
D38V1, multiclass
        clus
vv       DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE
  CLUS_1                          88                            90
  CLUS_2                          67                            35
  CLUS_3                          32                           157
  CLUS_4                          14                            28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  9(4P15.2) MUTATED       20     44     29     63     21     14
  DEL PEAK  9(4P15.2) WILD-TYPE     62     32     67     24     57     60
                               vv
clus                            CLUS_7
  DEL PEAK  9(4P15.2) MUTATED       10
  DEL PEAK  9(4P15.2) WILD-TYPE      8
D38V2, multiclass
        clus
vv       DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE
  CLUS_1                          20                            62
  CLUS_2                          44                            32
  CLUS_3                          29                            67
  CLUS_4                          63                            24
  CLUS_5                          21                            57
  CLUS_6                          14                            60
  CLUS_7                          10                             8
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(4P15.2) MUTATED       26     31     12     22
  DEL PEAK  9(4P15.2) WILD-TYPE     27     20     25     43
D38V3, multiclass
        clus
vv       DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE
  CLUS_1                          26                            27
  CLUS_2                          31                            20
  CLUS_3                          12                            25
  CLUS_4                          22                            43
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(4P15.2) MUTATED       34     40     17
  DEL PEAK  9(4P15.2) WILD-TYPE     42     42     31
D38V4, multiclass
        clus
vv       DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE
  CLUS_1                          34                            42
  CLUS_2                          40                            42
  CLUS_3                          17                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(4P15.2) MUTATED       97     59     39
  DEL PEAK  9(4P15.2) WILD-TYPE    110     75    113
D38V5, multiclass
        clus
vv       DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE
  CLUS_1                          97                           110
  CLUS_2                          59                            75
  CLUS_3                          39                           113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(4P15.2) MUTATED       28     67     42     58
  DEL PEAK  9(4P15.2) WILD-TYPE     23     90    113     72
D38V6, multiclass
        clus
vv       DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE
  CLUS_1                          28                            23
  CLUS_2                          67                            90
  CLUS_3                          42                           113
  CLUS_4                          58                            72
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(4P15.2) MUTATED       51     98     50
  DEL PEAK  9(4P15.2) WILD-TYPE     94    118     96
D38V7, multiclass
        clus
vv       DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE
  CLUS_1                          51                            94
  CLUS_2                          98                           118
  CLUS_3                          50                            96
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(4P15.2) MUTATED       80     61     58
  DEL PEAK  9(4P15.2) WILD-TYPE    118     63    127
D38V8, multiclass
        clus
vv       DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE
  CLUS_1                          80                           118
  CLUS_2                          61                            63
  CLUS_3                          58                           127
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(4P15.2) MUTATED       50     70     61
  DEL PEAK  9(4P15.2) WILD-TYPE    124     89     77
D38V9, multiclass
        clus
vv       DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE
  CLUS_1                          50                           124
  CLUS_2                          70                            89
  CLUS_3                          61                            77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(4P15.2) MUTATED       26     74     15     49     17
  DEL PEAK  9(4P15.2) WILD-TYPE     73     54     64     59     40
D38V10, multiclass
        clus
vv       DEL PEAK  9(4P15.2) MUTATED DEL PEAK  9(4P15.2) WILD-TYPE
  CLUS_1                          26                            73
  CLUS_2                          74                            54
  CLUS_3                          15                            64
  CLUS_4                          49                            59
  CLUS_5                          17                            40
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(39) Variable = DEL PEAK 10(4Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(4Q22.1) MUTATED       70     57     23     14
  DEL PEAK 10(4Q22.1) WILD-TYPE    108     45    166     28
D39V1, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          70                           108
  CLUS_2                          57                            45
  CLUS_3                          23                           166
  CLUS_4                          14                            28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 10(4Q22.1) MUTATED       12     31     29     55     18     14
  DEL PEAK 10(4Q22.1) WILD-TYPE     70     45     67     32     60     60
                               vv
clus                            CLUS_7
  DEL PEAK 10(4Q22.1) MUTATED        5
  DEL PEAK 10(4Q22.1) WILD-TYPE     13
D39V2, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          12                            70
  CLUS_2                          31                            45
  CLUS_3                          29                            67
  CLUS_4                          55                            32
  CLUS_5                          18                            60
  CLUS_6                          14                            60
  CLUS_7                           5                            13
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(4Q22.1) MUTATED       17     23     14     18
  DEL PEAK 10(4Q22.1) WILD-TYPE     36     28     23     47
D39V3, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          17                            36
  CLUS_2                          23                            28
  CLUS_3                          14                            23
  CLUS_4                          18                            47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q22.1) MUTATED       26     35     11
  DEL PEAK 10(4Q22.1) WILD-TYPE     50     47     37
D39V4, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          26                            50
  CLUS_2                          35                            47
  CLUS_3                          11                            37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q22.1) MUTATED       76     47     34
  DEL PEAK 10(4Q22.1) WILD-TYPE    131     87    118
D39V5, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          76                           131
  CLUS_2                          47                            87
  CLUS_3                          34                           118
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(4Q22.1) MUTATED       21     56     32     48
  DEL PEAK 10(4Q22.1) WILD-TYPE     30    101    123     82
D39V6, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          21                            30
  CLUS_2                          56                           101
  CLUS_3                          32                           123
  CLUS_4                          48                            82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q22.1) MUTATED       39     77     45
  DEL PEAK 10(4Q22.1) WILD-TYPE    106    139    101
D39V7, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          39                           106
  CLUS_2                          77                           139
  CLUS_3                          45                           101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q22.1) MUTATED       68     48     45
  DEL PEAK 10(4Q22.1) WILD-TYPE    130     76    140
D39V8, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          68                           130
  CLUS_2                          48                            76
  CLUS_3                          45                           140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q22.1) MUTATED       51     56     47
  DEL PEAK 10(4Q22.1) WILD-TYPE    123    103     91
D39V9, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          51                           123
  CLUS_2                          56                           103
  CLUS_3                          47                            91
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(4Q22.1) MUTATED       18     62     16     36     22
  DEL PEAK 10(4Q22.1) WILD-TYPE     81     66     63     72     35
D39V10, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          18                            81
  CLUS_2                          62                            66
  CLUS_3                          16                            63
  CLUS_4                          36                            72
  CLUS_5                          22                            35
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(40) Variable = DEL PEAK 11(4Q35.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4Q35.2) MUTATED       90     56     38     22
  DEL PEAK 11(4Q35.2) WILD-TYPE     88     46    151     20
D40V1, multiclass
        clus
vv       DEL PEAK 11(4Q35.2) MUTATED DEL PEAK 11(4Q35.2) WILD-TYPE
  CLUS_1                          90                            88
  CLUS_2                          56                            46
  CLUS_3                          38                           151
  CLUS_4                          22                            20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 11(4Q35.2) MUTATED       23     37     44     51     20     23
  DEL PEAK 11(4Q35.2) WILD-TYPE     59     39     52     36     58     51
                               vv
clus                            CLUS_7
  DEL PEAK 11(4Q35.2) MUTATED        8
  DEL PEAK 11(4Q35.2) WILD-TYPE     10
D40V2, multiclass
        clus
vv       DEL PEAK 11(4Q35.2) MUTATED DEL PEAK 11(4Q35.2) WILD-TYPE
  CLUS_1                          23                            59
  CLUS_2                          37                            39
  CLUS_3                          44                            52
  CLUS_4                          51                            36
  CLUS_5                          20                            58
  CLUS_6                          23                            51
  CLUS_7                           8                            10
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4Q35.2) MUTATED       22     25     15     29
  DEL PEAK 11(4Q35.2) WILD-TYPE     31     26     22     36
D40V3, multiclass
        clus
vv       DEL PEAK 11(4Q35.2) MUTATED DEL PEAK 11(4Q35.2) WILD-TYPE
  CLUS_1                          22                            31
  CLUS_2                          25                            26
  CLUS_3                          15                            22
  CLUS_4                          29                            36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q35.2) MUTATED       34     41     16
  DEL PEAK 11(4Q35.2) WILD-TYPE     42     41     32
D40V4, multiclass
        clus
vv       DEL PEAK 11(4Q35.2) MUTATED DEL PEAK 11(4Q35.2) WILD-TYPE
  CLUS_1                          34                            42
  CLUS_2                          41                            41
  CLUS_3                          16                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q35.2) MUTATED       88     62     46
  DEL PEAK 11(4Q35.2) WILD-TYPE    119     72    106
D40V5, multiclass
        clus
vv       DEL PEAK 11(4Q35.2) MUTATED DEL PEAK 11(4Q35.2) WILD-TYPE
  CLUS_1                          88                           119
  CLUS_2                          62                            72
  CLUS_3                          46                           106
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4Q35.2) MUTATED       24     71     52     49
  DEL PEAK 11(4Q35.2) WILD-TYPE     27     86    103     81
D40V6, multiclass
        clus
vv       DEL PEAK 11(4Q35.2) MUTATED DEL PEAK 11(4Q35.2) WILD-TYPE
  CLUS_1                          24                            27
  CLUS_2                          71                            86
  CLUS_3                          52                           103
  CLUS_4                          49                            81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q35.2) MUTATED       51     90     63
  DEL PEAK 11(4Q35.2) WILD-TYPE     94    126     83
D40V7, multiclass
        clus
vv       DEL PEAK 11(4Q35.2) MUTATED DEL PEAK 11(4Q35.2) WILD-TYPE
  CLUS_1                          51                            94
  CLUS_2                          90                           126
  CLUS_3                          63                            83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q35.2) MUTATED       90     59     55
  DEL PEAK 11(4Q35.2) WILD-TYPE    108     65    130
D40V8, multiclass
        clus
vv       DEL PEAK 11(4Q35.2) MUTATED DEL PEAK 11(4Q35.2) WILD-TYPE
  CLUS_1                          90                           108
  CLUS_2                          59                            65
  CLUS_3                          55                           130
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q35.2) MUTATED       69     61     63
  DEL PEAK 11(4Q35.2) WILD-TYPE    105     98     75
D40V9, multiclass
        clus
vv       DEL PEAK 11(4Q35.2) MUTATED DEL PEAK 11(4Q35.2) WILD-TYPE
  CLUS_1                          69                           105
  CLUS_2                          61                            98
  CLUS_3                          63                            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(4Q35.2) MUTATED       30     67     21     49     26
  DEL PEAK 11(4Q35.2) WILD-TYPE     69     61     58     59     31
D40V10, multiclass
        clus
vv       DEL PEAK 11(4Q35.2) MUTATED DEL PEAK 11(4Q35.2) WILD-TYPE
  CLUS_1                          30                            69
  CLUS_2                          67                            61
  CLUS_3                          21                            58
  CLUS_4                          49                            59
  CLUS_5                          26                            31
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(41) Variable = DEL PEAK 12(5Q11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(5Q11.2) MUTATED      112     65     21     11
  DEL PEAK 12(5Q11.2) WILD-TYPE     66     37    168     31
D41V1, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                         112                            66
  CLUS_2                          65                            37
  CLUS_3                          21                           168
  CLUS_4                          11                            31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 12(5Q11.2) MUTATED       18     51     53     59     10      8
  DEL PEAK 12(5Q11.2) WILD-TYPE     64     25     43     28     68     66
                               vv
clus                            CLUS_7
  DEL PEAK 12(5Q11.2) MUTATED       10
  DEL PEAK 12(5Q11.2) WILD-TYPE      8
D41V2, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          18                            64
  CLUS_2                          51                            25
  CLUS_3                          53                            43
  CLUS_4                          59                            28
  CLUS_5                          10                            68
  CLUS_6                           8                            66
  CLUS_7                          10                             8
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(5Q11.2) MUTATED       20     29     13     31
  DEL PEAK 12(5Q11.2) WILD-TYPE     33     22     24     34
D41V3, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          20                            33
  CLUS_2                          29                            22
  CLUS_3                          13                            24
  CLUS_4                          31                            34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(5Q11.2) MUTATED       33     41     19
  DEL PEAK 12(5Q11.2) WILD-TYPE     43     41     29
D41V4, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          33                            43
  CLUS_2                          41                            41
  CLUS_3                          19                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(5Q11.2) MUTATED       90     61     52
  DEL PEAK 12(5Q11.2) WILD-TYPE    117     73    100
D41V5, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          90                           117
  CLUS_2                          61                            73
  CLUS_3                          52                           100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(5Q11.2) MUTATED       34     74     39     56
  DEL PEAK 12(5Q11.2) WILD-TYPE     17     83    116     74
D41V6, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          34                            17
  CLUS_2                          74                            83
  CLUS_3                          39                           116
  CLUS_4                          56                            74
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(5Q11.2) MUTATED       50     95     61
  DEL PEAK 12(5Q11.2) WILD-TYPE     95    121     85
D41V7, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          50                            95
  CLUS_2                          95                           121
  CLUS_3                          61                            85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(5Q11.2) MUTATED       88     67     51
  DEL PEAK 12(5Q11.2) WILD-TYPE    110     57    134
D41V8, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          88                           110
  CLUS_2                          67                            57
  CLUS_3                          51                           134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(5Q11.2) MUTATED       67     62     63
  DEL PEAK 12(5Q11.2) WILD-TYPE    107     97     75
D41V9, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          67                           107
  CLUS_2                          62                            97
  CLUS_3                          63                            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(5Q11.2) MUTATED       34     70     14     53     21
  DEL PEAK 12(5Q11.2) WILD-TYPE     65     58     65     55     36
D41V10, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          34                            65
  CLUS_2                          70                            58
  CLUS_3                          14                            65
  CLUS_4                          53                            55
  CLUS_5                          21                            36
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(42) Variable = DEL PEAK 13(5Q15) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(5Q15) MUTATED      114     68     26     11
  DEL PEAK 13(5Q15) WILD-TYPE     64     34    163     31
D42V1, multiclass
        clus
vv       DEL PEAK 13(5Q15) MUTATED DEL PEAK 13(5Q15) WILD-TYPE
  CLUS_1                       114                          64
  CLUS_2                        68                          34
  CLUS_3                        26                         163
  CLUS_4                        11                          31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 13(5Q15) MUTATED       19     52     52     62     12     11     11
  DEL PEAK 13(5Q15) WILD-TYPE     63     24     44     25     66     63      7
D42V2, multiclass
        clus
vv       DEL PEAK 13(5Q15) MUTATED DEL PEAK 13(5Q15) WILD-TYPE
  CLUS_1                        19                          63
  CLUS_2                        52                          24
  CLUS_3                        52                          44
  CLUS_4                        62                          25
  CLUS_5                        12                          66
  CLUS_6                        11                          63
  CLUS_7                        11                           7
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(5Q15) MUTATED       19     29     14     30
  DEL PEAK 13(5Q15) WILD-TYPE     34     22     23     35
D42V3, multiclass
        clus
vv       DEL PEAK 13(5Q15) MUTATED DEL PEAK 13(5Q15) WILD-TYPE
  CLUS_1                        19                          34
  CLUS_2                        29                          22
  CLUS_3                        14                          23
  CLUS_4                        30                          35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(5Q15) MUTATED       32     41     19
  DEL PEAK 13(5Q15) WILD-TYPE     44     41     29
D42V4, multiclass
        clus
vv       DEL PEAK 13(5Q15) MUTATED DEL PEAK 13(5Q15) WILD-TYPE
  CLUS_1                        32                          44
  CLUS_2                        41                          41
  CLUS_3                        19                          29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(5Q15) MUTATED       93     64     55
  DEL PEAK 13(5Q15) WILD-TYPE    114     70     97
D42V5, multiclass
        clus
vv       DEL PEAK 13(5Q15) MUTATED DEL PEAK 13(5Q15) WILD-TYPE
  CLUS_1                        93                         114
  CLUS_2                        64                          70
  CLUS_3                        55                          97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(5Q15) MUTATED       34     76     44     58
  DEL PEAK 13(5Q15) WILD-TYPE     17     81    111     72
D42V6, multiclass
        clus
vv       DEL PEAK 13(5Q15) MUTATED DEL PEAK 13(5Q15) WILD-TYPE
  CLUS_1                        34                          17
  CLUS_2                        76                          81
  CLUS_3                        44                         111
  CLUS_4                        58                          72
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(5Q15) MUTATED       54    100     62
  DEL PEAK 13(5Q15) WILD-TYPE     91    116     84
D42V7, multiclass
        clus
vv       DEL PEAK 13(5Q15) MUTATED DEL PEAK 13(5Q15) WILD-TYPE
  CLUS_1                        54                          91
  CLUS_2                       100                         116
  CLUS_3                        62                          84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(5Q15) MUTATED       90     70     56
  DEL PEAK 13(5Q15) WILD-TYPE    108     54    129
D42V8, multiclass
        clus
vv       DEL PEAK 13(5Q15) MUTATED DEL PEAK 13(5Q15) WILD-TYPE
  CLUS_1                        90                         108
  CLUS_2                        70                          54
  CLUS_3                        56                         129
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(5Q15) MUTATED       70     69     63
  DEL PEAK 13(5Q15) WILD-TYPE    104     90     75
D42V9, multiclass
        clus
vv       DEL PEAK 13(5Q15) MUTATED DEL PEAK 13(5Q15) WILD-TYPE
  CLUS_1                        70                         104
  CLUS_2                        69                          90
  CLUS_3                        63                          75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(5Q15) MUTATED       41     74     13     52     22
  DEL PEAK 13(5Q15) WILD-TYPE     58     54     66     56     35
D42V10, multiclass
        clus
vv       DEL PEAK 13(5Q15) MUTATED DEL PEAK 13(5Q15) WILD-TYPE
  CLUS_1                        41                          58
  CLUS_2                        74                          54
  CLUS_3                        13                          66
  CLUS_4                        52                          56
  CLUS_5                        22                          35
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(43) Variable = DEL PEAK 14(5Q35.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q35.3) MUTATED       92     68     22     13
  DEL PEAK 14(5Q35.3) WILD-TYPE     86     34    167     29
D43V1, multiclass
        clus
vv       DEL PEAK 14(5Q35.3) MUTATED DEL PEAK 14(5Q35.3) WILD-TYPE
  CLUS_1                          92                            86
  CLUS_2                          68                            34
  CLUS_3                          22                           167
  CLUS_4                          13                            29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 14(5Q35.3) MUTATED       19     55     45     50     11      5
  DEL PEAK 14(5Q35.3) WILD-TYPE     63     21     51     37     67     69
                               vv
clus                            CLUS_7
  DEL PEAK 14(5Q35.3) MUTATED       10
  DEL PEAK 14(5Q35.3) WILD-TYPE      8
D43V2, multiclass
        clus
vv       DEL PEAK 14(5Q35.3) MUTATED DEL PEAK 14(5Q35.3) WILD-TYPE
  CLUS_1                          19                            63
  CLUS_2                          55                            21
  CLUS_3                          45                            51
  CLUS_4                          50                            37
  CLUS_5                          11                            67
  CLUS_6                           5                            69
  CLUS_7                          10                             8
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q35.3) MUTATED       18     26     12     27
  DEL PEAK 14(5Q35.3) WILD-TYPE     35     25     25     38
D43V3, multiclass
        clus
vv       DEL PEAK 14(5Q35.3) MUTATED DEL PEAK 14(5Q35.3) WILD-TYPE
  CLUS_1                          18                            35
  CLUS_2                          26                            25
  CLUS_3                          12                            25
  CLUS_4                          27                            38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q35.3) MUTATED       28     34     21
  DEL PEAK 14(5Q35.3) WILD-TYPE     48     48     27
D43V4, multiclass
        clus
vv       DEL PEAK 14(5Q35.3) MUTATED DEL PEAK 14(5Q35.3) WILD-TYPE
  CLUS_1                          28                            48
  CLUS_2                          34                            48
  CLUS_3                          21                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q35.3) MUTATED       88     58     45
  DEL PEAK 14(5Q35.3) WILD-TYPE    119     76    107
D43V5, multiclass
        clus
vv       DEL PEAK 14(5Q35.3) MUTATED DEL PEAK 14(5Q35.3) WILD-TYPE
  CLUS_1                          88                           119
  CLUS_2                          58                            76
  CLUS_3                          45                           107
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q35.3) MUTATED       37     68     35     51
  DEL PEAK 14(5Q35.3) WILD-TYPE     14     89    120     79
D43V6, multiclass
        clus
vv       DEL PEAK 14(5Q35.3) MUTATED DEL PEAK 14(5Q35.3) WILD-TYPE
  CLUS_1                          37                            14
  CLUS_2                          68                            89
  CLUS_3                          35                           120
  CLUS_4                          51                            79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q35.3) MUTATED       48     88     56
  DEL PEAK 14(5Q35.3) WILD-TYPE     97    128     90
D43V7, multiclass
        clus
vv       DEL PEAK 14(5Q35.3) MUTATED DEL PEAK 14(5Q35.3) WILD-TYPE
  CLUS_1                          48                            97
  CLUS_2                          88                           128
  CLUS_3                          56                            90
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q35.3) MUTATED       83     64     45
  DEL PEAK 14(5Q35.3) WILD-TYPE    115     60    140
D43V8, multiclass
        clus
vv       DEL PEAK 14(5Q35.3) MUTATED DEL PEAK 14(5Q35.3) WILD-TYPE
  CLUS_1                          83                           115
  CLUS_2                          64                            60
  CLUS_3                          45                           140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q35.3) MUTATED       64     56     58
  DEL PEAK 14(5Q35.3) WILD-TYPE    110    103     80
D43V9, multiclass
        clus
vv       DEL PEAK 14(5Q35.3) MUTATED DEL PEAK 14(5Q35.3) WILD-TYPE
  CLUS_1                          64                           110
  CLUS_2                          56                           103
  CLUS_3                          58                            80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(5Q35.3) MUTATED       33     66     10     47     22
  DEL PEAK 14(5Q35.3) WILD-TYPE     66     62     69     61     35
D43V10, multiclass
        clus
vv       DEL PEAK 14(5Q35.3) MUTATED DEL PEAK 14(5Q35.3) WILD-TYPE
  CLUS_1                          33                            66
  CLUS_2                          66                            62
  CLUS_3                          10                            69
  CLUS_4                          47                            61
  CLUS_5                          22                            35
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(44) Variable = DEL PEAK 15(6P25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED       38     30     19      6
  DEL PEAK 15(6P25.3) WILD-TYPE    140     72    170     36
D44V1, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          38                           140
  CLUS_2                          30                            72
  CLUS_3                          19                           170
  CLUS_4                           6                            36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 15(6P25.3) MUTATED       10     12     17     35     11      5
  DEL PEAK 15(6P25.3) WILD-TYPE     72     64     79     52     67     69
                               vv
clus                            CLUS_7
  DEL PEAK 15(6P25.3) MUTATED        3
  DEL PEAK 15(6P25.3) WILD-TYPE     15
D44V2, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          10                            72
  CLUS_2                          12                            64
  CLUS_3                          17                            79
  CLUS_4                          35                            52
  CLUS_5                          11                            67
  CLUS_6                           5                            69
  CLUS_7                           3                            15
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED       14     13      2     15
  DEL PEAK 15(6P25.3) WILD-TYPE     39     38     35     50
D44V3, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          14                            39
  CLUS_2                          13                            38
  CLUS_3                           2                            35
  CLUS_4                          15                            50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       15     25      4
  DEL PEAK 15(6P25.3) WILD-TYPE     61     57     44
D44V4, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          15                            61
  CLUS_2                          25                            57
  CLUS_3                           4                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       45     29     14
  DEL PEAK 15(6P25.3) WILD-TYPE    162    105    138
D44V5, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          45                           162
  CLUS_2                          29                           105
  CLUS_3                          14                           138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED        8     31     19     30
  DEL PEAK 15(6P25.3) WILD-TYPE     43    126    136    100
D44V6, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                           8                            43
  CLUS_2                          31                           126
  CLUS_3                          19                           136
  CLUS_4                          30                           100
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       20     46     27
  DEL PEAK 15(6P25.3) WILD-TYPE    125    170    119
D44V7, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          20                           125
  CLUS_2                          46                           170
  CLUS_3                          27                           119
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       37     27     29
  DEL PEAK 15(6P25.3) WILD-TYPE    161     97    156
D44V8, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          37                           161
  CLUS_2                          27                            97
  CLUS_3                          29                           156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       28     30     27
  DEL PEAK 15(6P25.3) WILD-TYPE    146    129    111
D44V9, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          28                           146
  CLUS_2                          30                           129
  CLUS_3                          27                           111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(6P25.3) MUTATED       12     31     10     24      8
  DEL PEAK 15(6P25.3) WILD-TYPE     87     97     69     84     49
D44V10, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          12                            87
  CLUS_2                          31                            97
  CLUS_3                          10                            69
  CLUS_4                          24                            84
  CLUS_5                           8                            49
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(45) Variable = DEL PEAK 16(7Q31.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(7Q31.1) MUTATED       36     16     15      7
  DEL PEAK 16(7Q31.1) WILD-TYPE    142     86    174     35
D45V1, multiclass
        clus
vv       DEL PEAK 16(7Q31.1) MUTATED DEL PEAK 16(7Q31.1) WILD-TYPE
  CLUS_1                          36                           142
  CLUS_2                          16                            86
  CLUS_3                          15                           174
  CLUS_4                           7                            35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 16(7Q31.1) MUTATED       11     16     18     13     10      5
  DEL PEAK 16(7Q31.1) WILD-TYPE     71     60     78     74     68     69
                               vv
clus                            CLUS_7
  DEL PEAK 16(7Q31.1) MUTATED        1
  DEL PEAK 16(7Q31.1) WILD-TYPE     17
D45V2, multiclass
        clus
vv       DEL PEAK 16(7Q31.1) MUTATED DEL PEAK 16(7Q31.1) WILD-TYPE
  CLUS_1                          11                            71
  CLUS_2                          16                            60
  CLUS_3                          18                            78
  CLUS_4                          13                            74
  CLUS_5                          10                            68
  CLUS_6                           5                            69
  CLUS_7                           1                            17
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(7Q31.1) MUTATED       10     11      6      8
  DEL PEAK 16(7Q31.1) WILD-TYPE     43     40     31     57
D45V3, multiclass
        clus
vv       DEL PEAK 16(7Q31.1) MUTATED DEL PEAK 16(7Q31.1) WILD-TYPE
  CLUS_1                          10                            43
  CLUS_2                          11                            40
  CLUS_3                           6                            31
  CLUS_4                           8                            57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(7Q31.1) MUTATED       13     11     11
  DEL PEAK 16(7Q31.1) WILD-TYPE     63     71     37
D45V4, multiclass
        clus
vv       DEL PEAK 16(7Q31.1) MUTATED DEL PEAK 16(7Q31.1) WILD-TYPE
  CLUS_1                          13                            63
  CLUS_2                          11                            71
  CLUS_3                          11                            37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(7Q31.1) MUTATED       28     19     27
  DEL PEAK 16(7Q31.1) WILD-TYPE    179    115    125
D45V5, multiclass
        clus
vv       DEL PEAK 16(7Q31.1) MUTATED DEL PEAK 16(7Q31.1) WILD-TYPE
  CLUS_1                          28                           179
  CLUS_2                          19                           115
  CLUS_3                          27                           125
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(7Q31.1) MUTATED       11     22     27     14
  DEL PEAK 16(7Q31.1) WILD-TYPE     40    135    128    116
D45V6, multiclass
        clus
vv       DEL PEAK 16(7Q31.1) MUTATED DEL PEAK 16(7Q31.1) WILD-TYPE
  CLUS_1                          11                            40
  CLUS_2                          22                           135
  CLUS_3                          27                           128
  CLUS_4                          14                           116
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(7Q31.1) MUTATED       23     31     20
  DEL PEAK 16(7Q31.1) WILD-TYPE    122    185    126
D45V7, multiclass
        clus
vv       DEL PEAK 16(7Q31.1) MUTATED DEL PEAK 16(7Q31.1) WILD-TYPE
  CLUS_1                          23                           122
  CLUS_2                          31                           185
  CLUS_3                          20                           126
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(7Q31.1) MUTATED       28     23     23
  DEL PEAK 16(7Q31.1) WILD-TYPE    170    101    162
D45V8, multiclass
        clus
vv       DEL PEAK 16(7Q31.1) MUTATED DEL PEAK 16(7Q31.1) WILD-TYPE
  CLUS_1                          28                           170
  CLUS_2                          23                           101
  CLUS_3                          23                           162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(7Q31.1) MUTATED       23     26     17
  DEL PEAK 16(7Q31.1) WILD-TYPE    151    133    121
D45V9, multiclass
        clus
vv       DEL PEAK 16(7Q31.1) MUTATED DEL PEAK 16(7Q31.1) WILD-TYPE
  CLUS_1                          23                           151
  CLUS_2                          26                           133
  CLUS_3                          17                           121
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(7Q31.1) MUTATED       17     19     10     13      7
  DEL PEAK 16(7Q31.1) WILD-TYPE     82    109     69     95     50
D45V10, multiclass
        clus
vv       DEL PEAK 16(7Q31.1) MUTATED DEL PEAK 16(7Q31.1) WILD-TYPE
  CLUS_1                          17                            82
  CLUS_2                          19                           109
  CLUS_3                          10                            69
  CLUS_4                          13                            95
  CLUS_5                           7                            50
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(46) Variable = DEL PEAK 17(7Q36.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(7Q36.1) MUTATED       60     24     28     15
  DEL PEAK 17(7Q36.1) WILD-TYPE    118     78    161     27
D46V1, multiclass
        clus
vv       DEL PEAK 17(7Q36.1) MUTATED DEL PEAK 17(7Q36.1) WILD-TYPE
  CLUS_1                          60                           118
  CLUS_2                          24                            78
  CLUS_3                          28                           161
  CLUS_4                          15                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 17(7Q36.1) MUTATED       22     21     22     25     20     11
  DEL PEAK 17(7Q36.1) WILD-TYPE     60     55     74     62     58     63
                               vv
clus                            CLUS_7
  DEL PEAK 17(7Q36.1) MUTATED        6
  DEL PEAK 17(7Q36.1) WILD-TYPE     12
D46V2, multiclass
        clus
vv       DEL PEAK 17(7Q36.1) MUTATED DEL PEAK 17(7Q36.1) WILD-TYPE
  CLUS_1                          22                            60
  CLUS_2                          21                            55
  CLUS_3                          22                            74
  CLUS_4                          25                            62
  CLUS_5                          20                            58
  CLUS_6                          11                            63
  CLUS_7                           6                            12
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(7Q36.1) MUTATED       16     21      8     12
  DEL PEAK 17(7Q36.1) WILD-TYPE     37     30     29     53
D46V3, multiclass
        clus
vv       DEL PEAK 17(7Q36.1) MUTATED DEL PEAK 17(7Q36.1) WILD-TYPE
  CLUS_1                          16                            37
  CLUS_2                          21                            30
  CLUS_3                           8                            29
  CLUS_4                          12                            53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(7Q36.1) MUTATED       21     25     11
  DEL PEAK 17(7Q36.1) WILD-TYPE     55     57     37
D46V4, multiclass
        clus
vv       DEL PEAK 17(7Q36.1) MUTATED DEL PEAK 17(7Q36.1) WILD-TYPE
  CLUS_1                          21                            55
  CLUS_2                          25                            57
  CLUS_3                          11                            37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(7Q36.1) MUTATED       54     35     35
  DEL PEAK 17(7Q36.1) WILD-TYPE    153     99    117
D46V5, multiclass
        clus
vv       DEL PEAK 17(7Q36.1) MUTATED DEL PEAK 17(7Q36.1) WILD-TYPE
  CLUS_1                          54                           153
  CLUS_2                          35                            99
  CLUS_3                          35                           117
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(7Q36.1) MUTATED       15     35     41     33
  DEL PEAK 17(7Q36.1) WILD-TYPE     36    122    114     97
D46V6, multiclass
        clus
vv       DEL PEAK 17(7Q36.1) MUTATED DEL PEAK 17(7Q36.1) WILD-TYPE
  CLUS_1                          15                            36
  CLUS_2                          35                           122
  CLUS_3                          41                           114
  CLUS_4                          33                            97
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(7Q36.1) MUTATED       40     51     34
  DEL PEAK 17(7Q36.1) WILD-TYPE    105    165    112
D46V7, multiclass
        clus
vv       DEL PEAK 17(7Q36.1) MUTATED DEL PEAK 17(7Q36.1) WILD-TYPE
  CLUS_1                          40                           105
  CLUS_2                          51                           165
  CLUS_3                          34                           112
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(7Q36.1) MUTATED       46     37     42
  DEL PEAK 17(7Q36.1) WILD-TYPE    152     87    143
D46V8, multiclass
        clus
vv       DEL PEAK 17(7Q36.1) MUTATED DEL PEAK 17(7Q36.1) WILD-TYPE
  CLUS_1                          46                           152
  CLUS_2                          37                            87
  CLUS_3                          42                           143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(7Q36.1) MUTATED       44     39     30
  DEL PEAK 17(7Q36.1) WILD-TYPE    130    120    108
D46V9, multiclass
        clus
vv       DEL PEAK 17(7Q36.1) MUTATED DEL PEAK 17(7Q36.1) WILD-TYPE
  CLUS_1                          44                           130
  CLUS_2                          39                           120
  CLUS_3                          30                           108
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(7Q36.1) MUTATED       24     36     17     23     13
  DEL PEAK 17(7Q36.1) WILD-TYPE     75     92     62     85     44
D46V10, multiclass
        clus
vv       DEL PEAK 17(7Q36.1) MUTATED DEL PEAK 17(7Q36.1) WILD-TYPE
  CLUS_1                          24                            75
  CLUS_2                          36                            92
  CLUS_3                          17                            62
  CLUS_4                          23                            85
  CLUS_5                          13                            44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(47) Variable = DEL PEAK 18(8P23.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(8P23.2) MUTATED      152     43     74     25
  DEL PEAK 18(8P23.2) WILD-TYPE     26     59    115     17
D47V1, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                         152                            26
  CLUS_2                          43                            59
  CLUS_3                          74                           115
  CLUS_4                          25                            17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 18(8P23.2) MUTATED       48     38     71     58     16     50
  DEL PEAK 18(8P23.2) WILD-TYPE     34     38     25     29     62     24
                               vv
clus                            CLUS_7
  DEL PEAK 18(8P23.2) MUTATED       13
  DEL PEAK 18(8P23.2) WILD-TYPE      5
D47V2, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                          48                            34
  CLUS_2                          38                            38
  CLUS_3                          71                            25
  CLUS_4                          58                            29
  CLUS_5                          16                            62
  CLUS_6                          50                            24
  CLUS_7                          13                             5
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(8P23.2) MUTATED       37     27     20     40
  DEL PEAK 18(8P23.2) WILD-TYPE     16     24     17     25
D47V3, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                          37                            16
  CLUS_2                          27                            24
  CLUS_3                          20                            17
  CLUS_4                          40                            25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P23.2) MUTATED       50     49     25
  DEL PEAK 18(8P23.2) WILD-TYPE     26     33     23
D47V4, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                          50                            26
  CLUS_2                          49                            33
  CLUS_3                          25                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P23.2) MUTATED      100     89     96
  DEL PEAK 18(8P23.2) WILD-TYPE    107     45     56
D47V5, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                         100                           107
  CLUS_2                          89                            45
  CLUS_3                          96                            56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(8P23.2) MUTATED       25    106     99     55
  DEL PEAK 18(8P23.2) WILD-TYPE     26     51     56     75
D47V6, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                          25                            26
  CLUS_2                         106                            51
  CLUS_3                          99                            56
  CLUS_4                          55                            75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P23.2) MUTATED       94    105     93
  DEL PEAK 18(8P23.2) WILD-TYPE     51    111     53
D47V7, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                          94                            51
  CLUS_2                         105                           111
  CLUS_3                          93                            53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P23.2) MUTATED      131     74     87
  DEL PEAK 18(8P23.2) WILD-TYPE     67     50     98
D47V8, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                         131                            67
  CLUS_2                          74                            50
  CLUS_3                          87                            98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P23.2) MUTATED      108     71     92
  DEL PEAK 18(8P23.2) WILD-TYPE     66     88     46
D47V9, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                         108                            66
  CLUS_2                          71                            88
  CLUS_3                          92                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(8P23.2) MUTATED       71     66     25     72     37
  DEL PEAK 18(8P23.2) WILD-TYPE     28     62     54     36     20
D47V10, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                          71                            28
  CLUS_2                          66                            62
  CLUS_3                          25                            54
  CLUS_4                          72                            36
  CLUS_5                          37                            20
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(48) Variable = DEL PEAK 19(9P23) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(9P23) MUTATED      125     63     43      2
  DEL PEAK 19(9P23) WILD-TYPE     53     39    146     40
D48V1, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                       125                          53
  CLUS_2                        63                          39
  CLUS_3                        43                         146
  CLUS_4                         2                          40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 19(9P23) MUTATED       27     54     52     62      9     18     11
  DEL PEAK 19(9P23) WILD-TYPE     55     22     44     25     69     56      7
D48V2, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        27                          55
  CLUS_2                        54                          22
  CLUS_3                        52                          44
  CLUS_4                        62                          25
  CLUS_5                         9                          69
  CLUS_6                        18                          56
  CLUS_7                        11                           7
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(9P23) MUTATED       22     28     14     34
  DEL PEAK 19(9P23) WILD-TYPE     31     23     23     31
D48V3, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        22                          31
  CLUS_2                        28                          23
  CLUS_3                        14                          23
  CLUS_4                        34                          31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(9P23) MUTATED       29     44     25
  DEL PEAK 19(9P23) WILD-TYPE     47     38     23
D48V4, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        29                          47
  CLUS_2                        44                          38
  CLUS_3                        25                          23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(9P23) MUTATED       98     61     67
  DEL PEAK 19(9P23) WILD-TYPE    109     73     85
D48V5, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        98                         109
  CLUS_2                        61                          73
  CLUS_3                        67                          85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(9P23) MUTATED       37     73     69     47
  DEL PEAK 19(9P23) WILD-TYPE     14     84     86     83
D48V6, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        37                          14
  CLUS_2                        73                          84
  CLUS_3                        69                          86
  CLUS_4                        47                          83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(9P23) MUTATED       63    102     65
  DEL PEAK 19(9P23) WILD-TYPE     82    114     81
D48V7, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        63                          82
  CLUS_2                       102                         114
  CLUS_3                        65                          81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(9P23) MUTATED       91     73     66
  DEL PEAK 19(9P23) WILD-TYPE    107     51    119
D48V8, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        91                         107
  CLUS_2                        73                          51
  CLUS_3                        66                         119
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(9P23) MUTATED       72     71     70
  DEL PEAK 19(9P23) WILD-TYPE    102     88     68
D48V9, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        72                         102
  CLUS_2                        71                          88
  CLUS_3                        70                          68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 19(9P23) MUTATED       46     77     14     53     23
  DEL PEAK 19(9P23) WILD-TYPE     53     51     65     55     34
D48V10, multiclass
        clus
vv       DEL PEAK 19(9P23) MUTATED DEL PEAK 19(9P23) WILD-TYPE
  CLUS_1                        46                          53
  CLUS_2                        77                          51
  CLUS_3                        14                          65
  CLUS_4                        53                          55
  CLUS_5                        23                          34
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(49) Variable = DEL PEAK 20(9P21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(9P21.3) MUTATED      137     72     73     10
  DEL PEAK 20(9P21.3) WILD-TYPE     41     30    116     32
D49V1, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                         137                            41
  CLUS_2                          72                            30
  CLUS_3                          73                           116
  CLUS_4                          10                            32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 20(9P21.3) MUTATED       41     63     67     64     11     34
  DEL PEAK 20(9P21.3) WILD-TYPE     41     13     29     23     67     40
                               vv
clus                            CLUS_7
  DEL PEAK 20(9P21.3) MUTATED       12
  DEL PEAK 20(9P21.3) WILD-TYPE      6
D49V2, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          41                            41
  CLUS_2                          63                            13
  CLUS_3                          67                            29
  CLUS_4                          64                            23
  CLUS_5                          11                            67
  CLUS_6                          34                            40
  CLUS_7                          12                             6
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(9P21.3) MUTATED       32     31     22     45
  DEL PEAK 20(9P21.3) WILD-TYPE     21     20     15     20
D49V3, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          32                            21
  CLUS_2                          31                            20
  CLUS_3                          22                            15
  CLUS_4                          45                            20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(9P21.3) MUTATED       44     52     34
  DEL PEAK 20(9P21.3) WILD-TYPE     32     30     14
D49V4, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          44                            32
  CLUS_2                          52                            30
  CLUS_3                          34                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(9P21.3) MUTATED      109     83     93
  DEL PEAK 20(9P21.3) WILD-TYPE     98     51     59
D49V5, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                         109                            98
  CLUS_2                          83                            51
  CLUS_3                          93                            59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(9P21.3) MUTATED       42     96     95     52
  DEL PEAK 20(9P21.3) WILD-TYPE      9     61     60     78
D49V6, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          42                             9
  CLUS_2                          96                            61
  CLUS_3                          95                            60
  CLUS_4                          52                            78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(9P21.3) MUTATED       83    123     84
  DEL PEAK 20(9P21.3) WILD-TYPE     62     93     62
D49V7, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          83                            62
  CLUS_2                         123                            93
  CLUS_3                          84                            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(9P21.3) MUTATED      120     91     79
  DEL PEAK 20(9P21.3) WILD-TYPE     78     33    106
D49V8, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                         120                            78
  CLUS_2                          91                            33
  CLUS_3                          79                           106
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(9P21.3) MUTATED       95     83     88
  DEL PEAK 20(9P21.3) WILD-TYPE     79     76     50
D49V9, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          95                            79
  CLUS_2                          83                            76
  CLUS_3                          88                            50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 20(9P21.3) MUTATED       67     86     17     66     30
  DEL PEAK 20(9P21.3) WILD-TYPE     32     42     62     42     27
D49V10, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          67                            32
  CLUS_2                          86                            42
  CLUS_3                          17                            62
  CLUS_4                          66                            42
  CLUS_5                          30                            27
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(50) Variable = DEL PEAK 21(9Q21.11) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(9Q21.11) MUTATED       68     19     15      1
  DEL PEAK 21(9Q21.11) WILD-TYPE    110     83    174     41
D50V1, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           68                            110
  CLUS_2                           19                             83
  CLUS_3                           15                            174
  CLUS_4                            1                             41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 21(9Q21.11) MUTATED       12     29     20     25      4      4
  DEL PEAK 21(9Q21.11) WILD-TYPE     70     47     76     62     74     70
                                vv
clus                             CLUS_7
  DEL PEAK 21(9Q21.11) MUTATED        9
  DEL PEAK 21(9Q21.11) WILD-TYPE      9
D50V2, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           12                             70
  CLUS_2                           29                             47
  CLUS_3                           20                             76
  CLUS_4                           25                             62
  CLUS_5                            4                             74
  CLUS_6                            4                             70
  CLUS_7                            9                              9
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(9Q21.11) MUTATED        9     10      6     12
  DEL PEAK 21(9Q21.11) WILD-TYPE     44     41     31     53
D50V3, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                            9                             44
  CLUS_2                           10                             41
  CLUS_3                            6                             31
  CLUS_4                           12                             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9Q21.11) MUTATED       10     15     12
  DEL PEAK 21(9Q21.11) WILD-TYPE     66     67     36
D50V4, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           10                             66
  CLUS_2                           15                             67
  CLUS_3                           12                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9Q21.11) MUTATED       40     29     32
  DEL PEAK 21(9Q21.11) WILD-TYPE    167    105    120
D50V5, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           40                            167
  CLUS_2                           29                            105
  CLUS_3                           32                            120
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(9Q21.11) MUTATED       18     31     33     19
  DEL PEAK 21(9Q21.11) WILD-TYPE     33    126    122    111
D50V6, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           18                             33
  CLUS_2                           31                            126
  CLUS_3                           33                            122
  CLUS_4                           19                            111
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9Q21.11) MUTATED       31     44     26
  DEL PEAK 21(9Q21.11) WILD-TYPE    114    172    120
D50V7, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           31                            114
  CLUS_2                           44                            172
  CLUS_3                           26                            120
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9Q21.11) MUTATED       34     40     27
  DEL PEAK 21(9Q21.11) WILD-TYPE    164     84    158
D50V8, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           34                            164
  CLUS_2                           40                             84
  CLUS_3                           27                            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9Q21.11) MUTATED       33     30     33
  DEL PEAK 21(9Q21.11) WILD-TYPE    141    129    105
D50V9, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           33                            141
  CLUS_2                           30                            129
  CLUS_3                           33                            105
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 21(9Q21.11) MUTATED       24     37      6     19     10
  DEL PEAK 21(9Q21.11) WILD-TYPE     75     91     73     89     47
D50V10, multiclass
        clus
vv       DEL PEAK 21(9Q21.11) MUTATED DEL PEAK 21(9Q21.11) WILD-TYPE
  CLUS_1                           24                             75
  CLUS_2                           37                             91
  CLUS_3                            6                             73
  CLUS_4                           19                             89
  CLUS_5                           10                             47
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(51) Variable = DEL PEAK 22(9Q34.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(9Q34.3) MUTATED       46     14     16      0
  DEL PEAK 22(9Q34.3) WILD-TYPE    132     88    173     42
D51V1, multiclass
        clus
vv       DEL PEAK 22(9Q34.3) MUTATED DEL PEAK 22(9Q34.3) WILD-TYPE
  CLUS_1                          46                           132
  CLUS_2                          14                            88
  CLUS_3                          16                           173
  CLUS_4                           0                            42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 22(9Q34.3) MUTATED        5     22     18     13      7      7
  DEL PEAK 22(9Q34.3) WILD-TYPE     77     54     78     74     71     67
                               vv
clus                            CLUS_7
  DEL PEAK 22(9Q34.3) MUTATED        4
  DEL PEAK 22(9Q34.3) WILD-TYPE     14
D51V2, multiclass
        clus
vv       DEL PEAK 22(9Q34.3) MUTATED DEL PEAK 22(9Q34.3) WILD-TYPE
  CLUS_1                           5                            77
  CLUS_2                          22                            54
  CLUS_3                          18                            78
  CLUS_4                          13                            74
  CLUS_5                           7                            71
  CLUS_6                           7                            67
  CLUS_7                           4                            14
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(9Q34.3) MUTATED        8      9      3     11
  DEL PEAK 22(9Q34.3) WILD-TYPE     45     42     34     54
D51V3, multiclass
        clus
vv       DEL PEAK 22(9Q34.3) MUTATED DEL PEAK 22(9Q34.3) WILD-TYPE
  CLUS_1                           8                            45
  CLUS_2                           9                            42
  CLUS_3                           3                            34
  CLUS_4                          11                            54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9Q34.3) MUTATED        8     15      8
  DEL PEAK 22(9Q34.3) WILD-TYPE     68     67     40
D51V4, multiclass
        clus
vv       DEL PEAK 22(9Q34.3) MUTATED DEL PEAK 22(9Q34.3) WILD-TYPE
  CLUS_1                           8                            68
  CLUS_2                          15                            67
  CLUS_3                           8                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9Q34.3) MUTATED       26     23     24
  DEL PEAK 22(9Q34.3) WILD-TYPE    181    111    128
D51V5, multiclass
        clus
vv       DEL PEAK 22(9Q34.3) MUTATED DEL PEAK 22(9Q34.3) WILD-TYPE
  CLUS_1                          26                           181
  CLUS_2                          23                           111
  CLUS_3                          24                           128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(9Q34.3) MUTATED       12     29     19     13
  DEL PEAK 22(9Q34.3) WILD-TYPE     39    128    136    117
D51V6, multiclass
        clus
vv       DEL PEAK 22(9Q34.3) MUTATED DEL PEAK 22(9Q34.3) WILD-TYPE
  CLUS_1                          12                            39
  CLUS_2                          29                           128
  CLUS_3                          19                           136
  CLUS_4                          13                           117
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9Q34.3) MUTATED       19     33     24
  DEL PEAK 22(9Q34.3) WILD-TYPE    126    183    122
D51V7, multiclass
        clus
vv       DEL PEAK 22(9Q34.3) MUTATED DEL PEAK 22(9Q34.3) WILD-TYPE
  CLUS_1                          19                           126
  CLUS_2                          33                           183
  CLUS_3                          24                           122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9Q34.3) MUTATED       30     27     19
  DEL PEAK 22(9Q34.3) WILD-TYPE    168     97    166
D51V8, multiclass
        clus
vv       DEL PEAK 22(9Q34.3) MUTATED DEL PEAK 22(9Q34.3) WILD-TYPE
  CLUS_1                          30                           168
  CLUS_2                          27                            97
  CLUS_3                          19                           166
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9Q34.3) MUTATED       24     21     28
  DEL PEAK 22(9Q34.3) WILD-TYPE    150    138    110
D51V9, multiclass
        clus
vv       DEL PEAK 22(9Q34.3) MUTATED DEL PEAK 22(9Q34.3) WILD-TYPE
  CLUS_1                          24                           150
  CLUS_2                          21                           138
  CLUS_3                          28                           110
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 22(9Q34.3) MUTATED       12     29      5     19      8
  DEL PEAK 22(9Q34.3) WILD-TYPE     87     99     74     89     49
D51V10, multiclass
        clus
vv       DEL PEAK 22(9Q34.3) MUTATED DEL PEAK 22(9Q34.3) WILD-TYPE
  CLUS_1                          12                            87
  CLUS_2                          29                            99
  CLUS_3                           5                            74
  CLUS_4                          19                            89
  CLUS_5                           8                            49
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(52) Variable = DEL PEAK 23(10P15.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(10P15.3) MUTATED       83     31     37     14
  DEL PEAK 23(10P15.3) WILD-TYPE     95     71    152     28
D52V1, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           83                             95
  CLUS_2                           31                             71
  CLUS_3                           37                            152
  CLUS_4                           14                             28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 23(10P15.3) MUTATED       17     24     42     39     11     21
  DEL PEAK 23(10P15.3) WILD-TYPE     65     52     54     48     67     53
                                vv
clus                             CLUS_7
  DEL PEAK 23(10P15.3) MUTATED       11
  DEL PEAK 23(10P15.3) WILD-TYPE      7
D52V2, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           17                             65
  CLUS_2                           24                             52
  CLUS_3                           42                             54
  CLUS_4                           39                             48
  CLUS_5                           11                             67
  CLUS_6                           21                             53
  CLUS_7                           11                              7
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(10P15.3) MUTATED       20     16     15     19
  DEL PEAK 23(10P15.3) WILD-TYPE     33     35     22     46
D52V3, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           20                             33
  CLUS_2                           16                             35
  CLUS_3                           15                             22
  CLUS_4                           19                             46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(10P15.3) MUTATED       29     27     14
  DEL PEAK 23(10P15.3) WILD-TYPE     47     55     34
D52V4, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           29                             47
  CLUS_2                           27                             55
  CLUS_3                           14                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(10P15.3) MUTATED       60     53     49
  DEL PEAK 23(10P15.3) WILD-TYPE    147     81    103
D52V5, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           60                            147
  CLUS_2                           53                             81
  CLUS_3                           49                            103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(10P15.3) MUTATED       14     61     52     35
  DEL PEAK 23(10P15.3) WILD-TYPE     37     96    103     95
D52V6, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           14                             37
  CLUS_2                           61                             96
  CLUS_3                           52                            103
  CLUS_4                           35                             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(10P15.3) MUTATED       39     69     55
  DEL PEAK 23(10P15.3) WILD-TYPE    106    147     91
D52V7, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           39                            106
  CLUS_2                           69                            147
  CLUS_3                           55                             91
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(10P15.3) MUTATED       72     45     46
  DEL PEAK 23(10P15.3) WILD-TYPE    126     79    139
D52V8, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           72                            126
  CLUS_2                           45                             79
  CLUS_3                           46                            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(10P15.3) MUTATED       47     52     53
  DEL PEAK 23(10P15.3) WILD-TYPE    127    107     85
D52V9, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           47                            127
  CLUS_2                           52                            107
  CLUS_3                           53                             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 23(10P15.3) MUTATED       37     46     11     42     16
  DEL PEAK 23(10P15.3) WILD-TYPE     62     82     68     66     41
D52V10, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           37                             62
  CLUS_2                           46                             82
  CLUS_3                           11                             68
  CLUS_4                           42                             66
  CLUS_5                           16                             41
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(53) Variable = DEL PEAK 24(10P11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P11.21) MUTATED       79     32     29     12
  DEL PEAK 24(10P11.21) WILD-TYPE     99     70    160     30
D53V1, multiclass
        clus
vv       DEL PEAK 24(10P11.21) MUTATED DEL PEAK 24(10P11.21) WILD-TYPE
  CLUS_1                            79                              99
  CLUS_2                            32                              70
  CLUS_3                            29                             160
  CLUS_4                            12                              30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 24(10P11.21) MUTATED       11     24     41     37     12     18
  DEL PEAK 24(10P11.21) WILD-TYPE     71     52     55     50     66     56
                                 vv
clus                              CLUS_7
  DEL PEAK 24(10P11.21) MUTATED        9
  DEL PEAK 24(10P11.21) WILD-TYPE      9
D53V2, multiclass
        clus
vv       DEL PEAK 24(10P11.21) MUTATED DEL PEAK 24(10P11.21) WILD-TYPE
  CLUS_1                            11                              71
  CLUS_2                            24                              52
  CLUS_3                            41                              55
  CLUS_4                            37                              50
  CLUS_5                            12                              66
  CLUS_6                            18                              56
  CLUS_7                             9                               9
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P11.21) MUTATED       20     15     15     18
  DEL PEAK 24(10P11.21) WILD-TYPE     33     36     22     47
D53V3, multiclass
        clus
vv       DEL PEAK 24(10P11.21) MUTATED DEL PEAK 24(10P11.21) WILD-TYPE
  CLUS_1                            20                              33
  CLUS_2                            15                              36
  CLUS_3                            15                              22
  CLUS_4                            18                              47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P11.21) MUTATED       31     22     15
  DEL PEAK 24(10P11.21) WILD-TYPE     45     60     33
D53V4, multiclass
        clus
vv       DEL PEAK 24(10P11.21) MUTATED DEL PEAK 24(10P11.21) WILD-TYPE
  CLUS_1                            31                              45
  CLUS_2                            22                              60
  CLUS_3                            15                              33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P11.21) MUTATED       62     47     40
  DEL PEAK 24(10P11.21) WILD-TYPE    145     87    112
D53V5, multiclass
        clus
vv       DEL PEAK 24(10P11.21) MUTATED DEL PEAK 24(10P11.21) WILD-TYPE
  CLUS_1                            62                             145
  CLUS_2                            47                              87
  CLUS_3                            40                             112
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P11.21) MUTATED       13     52     45     39
  DEL PEAK 24(10P11.21) WILD-TYPE     38    105    110     91
D53V6, multiclass
        clus
vv       DEL PEAK 24(10P11.21) MUTATED DEL PEAK 24(10P11.21) WILD-TYPE
  CLUS_1                            13                              38
  CLUS_2                            52                             105
  CLUS_3                            45                             110
  CLUS_4                            39                              91
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P11.21) MUTATED       30     73     47
  DEL PEAK 24(10P11.21) WILD-TYPE    115    143     99
D53V7, multiclass
        clus
vv       DEL PEAK 24(10P11.21) MUTATED DEL PEAK 24(10P11.21) WILD-TYPE
  CLUS_1                            30                             115
  CLUS_2                            73                             143
  CLUS_3                            47                              99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P11.21) MUTATED       63     44     43
  DEL PEAK 24(10P11.21) WILD-TYPE    135     80    142
D53V8, multiclass
        clus
vv       DEL PEAK 24(10P11.21) MUTATED DEL PEAK 24(10P11.21) WILD-TYPE
  CLUS_1                            63                             135
  CLUS_2                            44                              80
  CLUS_3                            43                             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P11.21) MUTATED       43     55     43
  DEL PEAK 24(10P11.21) WILD-TYPE    131    104     95
D53V9, multiclass
        clus
vv       DEL PEAK 24(10P11.21) MUTATED DEL PEAK 24(10P11.21) WILD-TYPE
  CLUS_1                            43                             131
  CLUS_2                            55                             104
  CLUS_3                            43                              95
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 24(10P11.21) MUTATED       34     47     10     36     14
  DEL PEAK 24(10P11.21) WILD-TYPE     65     81     69     72     43
D53V10, multiclass
        clus
vv       DEL PEAK 24(10P11.21) MUTATED DEL PEAK 24(10P11.21) WILD-TYPE
  CLUS_1                            34                              65
  CLUS_2                            47                              81
  CLUS_3                            10                              69
  CLUS_4                            36                              72
  CLUS_5                            14                              43
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(54) Variable = DEL PEAK 25(10Q23.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10Q23.31) MUTATED       58     40     29      7
  DEL PEAK 25(10Q23.31) WILD-TYPE    120     62    160     35
D54V1, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            58                             120
  CLUS_2                            40                              62
  CLUS_3                            29                             160
  CLUS_4                             7                              35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 25(10Q23.31) MUTATED        7     25     30     36     24      7
  DEL PEAK 25(10Q23.31) WILD-TYPE     75     51     66     51     54     67
                                 vv
clus                              CLUS_7
  DEL PEAK 25(10Q23.31) MUTATED        5
  DEL PEAK 25(10Q23.31) WILD-TYPE     13
D54V2, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                             7                              75
  CLUS_2                            25                              51
  CLUS_3                            30                              66
  CLUS_4                            36                              51
  CLUS_5                            24                              54
  CLUS_6                             7                              67
  CLUS_7                             5                              13
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10Q23.31) MUTATED       16     19      6     15
  DEL PEAK 25(10Q23.31) WILD-TYPE     37     32     31     50
D54V3, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            16                              37
  CLUS_2                            19                              32
  CLUS_3                             6                              31
  CLUS_4                            15                              50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10Q23.31) MUTATED       20     23     13
  DEL PEAK 25(10Q23.31) WILD-TYPE     56     59     35
D54V4, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            20                              56
  CLUS_2                            23                              59
  CLUS_3                            13                              35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10Q23.31) MUTATED       73     33     23
  DEL PEAK 25(10Q23.31) WILD-TYPE    134    101    129
D54V5, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            73                             134
  CLUS_2                            33                             101
  CLUS_3                            23                             129
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10Q23.31) MUTATED       17     39     22     51
  DEL PEAK 25(10Q23.31) WILD-TYPE     34    118    133     79
D54V6, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            17                              34
  CLUS_2                            39                             118
  CLUS_3                            22                             133
  CLUS_4                            51                              79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10Q23.31) MUTATED       28     71     32
  DEL PEAK 25(10Q23.31) WILD-TYPE    117    145    114
D54V7, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            28                             117
  CLUS_2                            71                             145
  CLUS_3                            32                             114
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10Q23.31) MUTATED       50     38     43
  DEL PEAK 25(10Q23.31) WILD-TYPE    148     86    142
D54V8, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            50                             148
  CLUS_2                            38                              86
  CLUS_3                            43                             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10Q23.31) MUTATED       35     51     37
  DEL PEAK 25(10Q23.31) WILD-TYPE    139    108    101
D54V9, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            35                             139
  CLUS_2                            51                             108
  CLUS_3                            37                             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 25(10Q23.31) MUTATED       18     44     18     31     12
  DEL PEAK 25(10Q23.31) WILD-TYPE     81     84     61     77     45
D54V10, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            18                              81
  CLUS_2                            44                              84
  CLUS_3                            18                              61
  CLUS_4                            31                              77
  CLUS_5                            12                              45
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(55) Variable = DEL PEAK 26(11P15.5) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(11P15.5) MUTATED       64     54     34      4
  DEL PEAK 26(11P15.5) WILD-TYPE    114     48    155     38
D55V1, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           64                            114
  CLUS_2                           54                             48
  CLUS_3                           34                            155
  CLUS_4                            4                             38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 26(11P15.5) MUTATED       19     28     24     50     26      5
  DEL PEAK 26(11P15.5) WILD-TYPE     63     48     72     37     52     69
                                vv
clus                             CLUS_7
  DEL PEAK 26(11P15.5) MUTATED        4
  DEL PEAK 26(11P15.5) WILD-TYPE     14
D55V2, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           19                             63
  CLUS_2                           28                             48
  CLUS_3                           24                             72
  CLUS_4                           50                             37
  CLUS_5                           26                             52
  CLUS_6                            5                             69
  CLUS_7                            4                             14
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(11P15.5) MUTATED       17     19     11     20
  DEL PEAK 26(11P15.5) WILD-TYPE     36     32     26     45
D55V3, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           17                             36
  CLUS_2                           19                             32
  CLUS_3                           11                             26
  CLUS_4                           20                             45
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(11P15.5) MUTATED       21     32     14
  DEL PEAK 26(11P15.5) WILD-TYPE     55     50     34
D55V4, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           21                             55
  CLUS_2                           32                             50
  CLUS_3                           14                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(11P15.5) MUTATED       85     35     30
  DEL PEAK 26(11P15.5) WILD-TYPE    122     99    122
D55V5, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           85                            122
  CLUS_2                           35                             99
  CLUS_3                           30                            122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(11P15.5) MUTATED       16     37     41     56
  DEL PEAK 26(11P15.5) WILD-TYPE     35    120    114     74
D55V6, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           16                             35
  CLUS_2                           37                            120
  CLUS_3                           41                            114
  CLUS_4                           56                             74
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(11P15.5) MUTATED       24     93     39
  DEL PEAK 26(11P15.5) WILD-TYPE    121    123    107
D55V7, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           24                            121
  CLUS_2                           93                            123
  CLUS_3                           39                            107
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(11P15.5) MUTATED       50     50     56
  DEL PEAK 26(11P15.5) WILD-TYPE    148     74    129
D55V8, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           50                            148
  CLUS_2                           50                             74
  CLUS_3                           56                            129
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(11P15.5) MUTATED       44     55     44
  DEL PEAK 26(11P15.5) WILD-TYPE    130    104     94
D55V9, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           44                            130
  CLUS_2                           55                            104
  CLUS_3                           44                             94
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 26(11P15.5) MUTATED       23     61     21     29      9
  DEL PEAK 26(11P15.5) WILD-TYPE     76     67     58     79     48
D55V10, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           23                             76
  CLUS_2                           61                             67
  CLUS_3                           21                             58
  CLUS_4                           29                             79
  CLUS_5                            9                             48
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(56) Variable = DEL PEAK 27(11Q23.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(11Q23.1) MUTATED      107     53     63     16
  DEL PEAK 27(11Q23.1) WILD-TYPE     71     49    126     26
D56V1, multiclass
        clus
vv       DEL PEAK 27(11Q23.1) MUTATED DEL PEAK 27(11Q23.1) WILD-TYPE
  CLUS_1                          107                             71
  CLUS_2                           53                             49
  CLUS_3                           63                            126
  CLUS_4                           16                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 27(11Q23.1) MUTATED       26     31     49     46     65     12
  DEL PEAK 27(11Q23.1) WILD-TYPE     56     45     47     41     13     62
                                vv
clus                             CLUS_7
  DEL PEAK 27(11Q23.1) MUTATED       10
  DEL PEAK 27(11Q23.1) WILD-TYPE      8
D56V2, multiclass
        clus
vv       DEL PEAK 27(11Q23.1) MUTATED DEL PEAK 27(11Q23.1) WILD-TYPE
  CLUS_1                           26                             56
  CLUS_2                           31                             45
  CLUS_3                           49                             47
  CLUS_4                           46                             41
  CLUS_5                           65                             13
  CLUS_6                           12                             62
  CLUS_7                           10                              8
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(11Q23.1) MUTATED       25     31     18     24
  DEL PEAK 27(11Q23.1) WILD-TYPE     28     20     19     41
D56V3, multiclass
        clus
vv       DEL PEAK 27(11Q23.1) MUTATED DEL PEAK 27(11Q23.1) WILD-TYPE
  CLUS_1                           25                             28
  CLUS_2                           31                             20
  CLUS_3                           18                             19
  CLUS_4                           24                             41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11Q23.1) MUTATED       39     42     17
  DEL PEAK 27(11Q23.1) WILD-TYPE     37     40     31
D56V4, multiclass
        clus
vv       DEL PEAK 27(11Q23.1) MUTATED DEL PEAK 27(11Q23.1) WILD-TYPE
  CLUS_1                           39                             37
  CLUS_2                           42                             40
  CLUS_3                           17                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11Q23.1) MUTATED      120     58     52
  DEL PEAK 27(11Q23.1) WILD-TYPE     87     76    100
D56V5, multiclass
        clus
vv       DEL PEAK 27(11Q23.1) MUTATED DEL PEAK 27(11Q23.1) WILD-TYPE
  CLUS_1                          120                             87
  CLUS_2                           58                             76
  CLUS_3                           52                            100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(11Q23.1) MUTATED       18     64     56     92
  DEL PEAK 27(11Q23.1) WILD-TYPE     33     93     99     38
D56V6, multiclass
        clus
vv       DEL PEAK 27(11Q23.1) MUTATED DEL PEAK 27(11Q23.1) WILD-TYPE
  CLUS_1                           18                             33
  CLUS_2                           64                             93
  CLUS_3                           56                             99
  CLUS_4                           92                             38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11Q23.1) MUTATED       54    120     64
  DEL PEAK 27(11Q23.1) WILD-TYPE     91     96     82
D56V7, multiclass
        clus
vv       DEL PEAK 27(11Q23.1) MUTATED DEL PEAK 27(11Q23.1) WILD-TYPE
  CLUS_1                           54                             91
  CLUS_2                          120                             96
  CLUS_3                           64                             82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11Q23.1) MUTATED       85     52    101
  DEL PEAK 27(11Q23.1) WILD-TYPE    113     72     84
D56V8, multiclass
        clus
vv       DEL PEAK 27(11Q23.1) MUTATED DEL PEAK 27(11Q23.1) WILD-TYPE
  CLUS_1                           85                            113
  CLUS_2                           52                             72
  CLUS_3                          101                             84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11Q23.1) MUTATED       68     86     65
  DEL PEAK 27(11Q23.1) WILD-TYPE    106     73     73
D56V9, multiclass
        clus
vv       DEL PEAK 27(11Q23.1) MUTATED DEL PEAK 27(11Q23.1) WILD-TYPE
  CLUS_1                           68                            106
  CLUS_2                           86                             73
  CLUS_3                           65                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 27(11Q23.1) MUTATED       35     63     49     48     24
  DEL PEAK 27(11Q23.1) WILD-TYPE     64     65     30     60     33
D56V10, multiclass
        clus
vv       DEL PEAK 27(11Q23.1) MUTATED DEL PEAK 27(11Q23.1) WILD-TYPE
  CLUS_1                           35                             64
  CLUS_2                           63                             65
  CLUS_3                           49                             30
  CLUS_4                           48                             60
  CLUS_5                           24                             33
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(57) Variable = DEL PEAK 28(12Q24.33) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(12Q24.33) MUTATED       37     13      7      3
  DEL PEAK 28(12Q24.33) WILD-TYPE    141     89    182     39
D57V1, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                            37                             141
  CLUS_2                            13                              89
  CLUS_3                             7                             182
  CLUS_4                             3                              39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 28(12Q24.33) MUTATED        5     12     13     21      4      1
  DEL PEAK 28(12Q24.33) WILD-TYPE     77     64     83     66     74     73
                                 vv
clus                              CLUS_7
  DEL PEAK 28(12Q24.33) MUTATED        4
  DEL PEAK 28(12Q24.33) WILD-TYPE     14
D57V2, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                             5                              77
  CLUS_2                            12                              64
  CLUS_3                            13                              83
  CLUS_4                            21                              66
  CLUS_5                             4                              74
  CLUS_6                             1                              73
  CLUS_7                             4                              14
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(12Q24.33) MUTATED        9      9      4      7
  DEL PEAK 28(12Q24.33) WILD-TYPE     44     42     33     58
D57V3, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                             9                              44
  CLUS_2                             9                              42
  CLUS_3                             4                              33
  CLUS_4                             7                              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(12Q24.33) MUTATED       12     13      4
  DEL PEAK 28(12Q24.33) WILD-TYPE     64     69     44
D57V4, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                            12                              64
  CLUS_2                            13                              69
  CLUS_3                             4                              44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(12Q24.33) MUTATED       27     15     17
  DEL PEAK 28(12Q24.33) WILD-TYPE    180    119    135
D57V5, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                            27                             180
  CLUS_2                            15                             119
  CLUS_3                            17                             135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(12Q24.33) MUTATED        8     18     15     18
  DEL PEAK 28(12Q24.33) WILD-TYPE     43    139    140    112
D57V6, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                             8                              43
  CLUS_2                            18                             139
  CLUS_3                            15                             140
  CLUS_4                            18                             112
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(12Q24.33) MUTATED       16     28     13
  DEL PEAK 28(12Q24.33) WILD-TYPE    129    188    133
D57V7, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                            16                             129
  CLUS_2                            28                             188
  CLUS_3                            13                             133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(12Q24.33) MUTATED       21     18     18
  DEL PEAK 28(12Q24.33) WILD-TYPE    177    106    167
D57V8, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                            21                             177
  CLUS_2                            18                             106
  CLUS_3                            18                             167
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(12Q24.33) MUTATED       15     25     11
  DEL PEAK 28(12Q24.33) WILD-TYPE    159    134    127
D57V9, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                            15                             159
  CLUS_2                            25                             134
  CLUS_3                            11                             127
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 28(12Q24.33) MUTATED       12     19      6      9      5
  DEL PEAK 28(12Q24.33) WILD-TYPE     87    109     73     99     52
D57V10, multiclass
        clus
vv       DEL PEAK 28(12Q24.33) MUTATED DEL PEAK 28(12Q24.33) WILD-TYPE
  CLUS_1                            12                              87
  CLUS_2                            19                             109
  CLUS_3                             6                              73
  CLUS_4                             9                              99
  CLUS_5                             5                              52
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(58) Variable = DEL PEAK 29(13Q12.11) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(13Q12.11) MUTATED       99     73     35     17
  DEL PEAK 29(13Q12.11) WILD-TYPE     79     29    154     25
D58V1, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            99                              79
  CLUS_2                            73                              29
  CLUS_3                            35                             154
  CLUS_4                            17                              25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 29(13Q12.11) MUTATED       21     51     48     57     25     16
  DEL PEAK 29(13Q12.11) WILD-TYPE     61     25     48     30     53     58
                                 vv
clus                              CLUS_7
  DEL PEAK 29(13Q12.11) MUTATED        6
  DEL PEAK 29(13Q12.11) WILD-TYPE     12
D58V2, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            21                              61
  CLUS_2                            51                              25
  CLUS_3                            48                              48
  CLUS_4                            57                              30
  CLUS_5                            25                              53
  CLUS_6                            16                              58
  CLUS_7                             6                              12
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(13Q12.11) MUTATED       21     31     16     29
  DEL PEAK 29(13Q12.11) WILD-TYPE     32     20     21     36
D58V3, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            21                              32
  CLUS_2                            31                              20
  CLUS_3                            16                              21
  CLUS_4                            29                              36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(13Q12.11) MUTATED       32     44     21
  DEL PEAK 29(13Q12.11) WILD-TYPE     44     38     27
D58V4, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            32                              44
  CLUS_2                            44                              38
  CLUS_3                            21                              27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(13Q12.11) MUTATED      101     62     53
  DEL PEAK 29(13Q12.11) WILD-TYPE    106     72     99
D58V5, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                           101                             106
  CLUS_2                            62                              72
  CLUS_3                            53                              99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(13Q12.11) MUTATED       37     73     52     54
  DEL PEAK 29(13Q12.11) WILD-TYPE     14     84    103     76
D58V6, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            37                              14
  CLUS_2                            73                              84
  CLUS_3                            52                             103
  CLUS_4                            54                              76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(13Q12.11) MUTATED       61     98     64
  DEL PEAK 29(13Q12.11) WILD-TYPE     84    118     82
D58V7, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            61                              84
  CLUS_2                            98                             118
  CLUS_3                            64                              82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(13Q12.11) MUTATED       92     64     67
  DEL PEAK 29(13Q12.11) WILD-TYPE    106     60    118
D58V8, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            92                             106
  CLUS_2                            64                              60
  CLUS_3                            67                             118
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(13Q12.11) MUTATED       74     68     66
  DEL PEAK 29(13Q12.11) WILD-TYPE    100     91     72
D58V9, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            74                             100
  CLUS_2                            68                              91
  CLUS_3                            66                              72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 29(13Q12.11) MUTATED       40     73     23     51     21
  DEL PEAK 29(13Q12.11) WILD-TYPE     59     55     56     57     36
D58V10, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            40                              59
  CLUS_2                            73                              55
  CLUS_3                            23                              56
  CLUS_4                            51                              57
  CLUS_5                            21                              36
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(59) Variable = DEL PEAK 30(13Q14.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(13Q14.2) MUTATED       69     76     49     15
  DEL PEAK 30(13Q14.2) WILD-TYPE    109     26    140     27
D59V1, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           69                            109
  CLUS_2                           76                             26
  CLUS_3                           49                            140
  CLUS_4                           15                             27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 30(13Q14.2) MUTATED       17     44     39     47     44     15
  DEL PEAK 30(13Q14.2) WILD-TYPE     65     32     57     40     34     59
                                vv
clus                             CLUS_7
  DEL PEAK 30(13Q14.2) MUTATED        3
  DEL PEAK 30(13Q14.2) WILD-TYPE     15
D59V2, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           17                             65
  CLUS_2                           44                             32
  CLUS_3                           39                             57
  CLUS_4                           47                             40
  CLUS_5                           44                             34
  CLUS_6                           15                             59
  CLUS_7                            3                             15
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(13Q14.2) MUTATED       19     28     14     22
  DEL PEAK 30(13Q14.2) WILD-TYPE     34     23     23     43
D59V3, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           19                             34
  CLUS_2                           28                             23
  CLUS_3                           14                             23
  CLUS_4                           22                             43
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(13Q14.2) MUTATED       27     35     21
  DEL PEAK 30(13Q14.2) WILD-TYPE     49     47     27
D59V4, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           27                             49
  CLUS_2                           35                             47
  CLUS_3                           21                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(13Q14.2) MUTATED      110     52     42
  DEL PEAK 30(13Q14.2) WILD-TYPE     97     82    110
D59V5, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                          110                             97
  CLUS_2                           52                             82
  CLUS_3                           42                            110
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(13Q14.2) MUTATED       32     61     42     69
  DEL PEAK 30(13Q14.2) WILD-TYPE     19     96    113     61
D59V6, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           32                             19
  CLUS_2                           61                             96
  CLUS_3                           42                            113
  CLUS_4                           69                             61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(13Q14.2) MUTATED       49    107     52
  DEL PEAK 30(13Q14.2) WILD-TYPE     96    109     94
D59V7, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           49                             96
  CLUS_2                          107                            109
  CLUS_3                           52                             94
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(13Q14.2) MUTATED       75     56     77
  DEL PEAK 30(13Q14.2) WILD-TYPE    123     68    108
D59V8, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           75                            123
  CLUS_2                           56                             68
  CLUS_3                           77                            108
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(13Q14.2) MUTATED       63     73     55
  DEL PEAK 30(13Q14.2) WILD-TYPE    111     86     83
D59V9, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           63                            111
  CLUS_2                           73                             86
  CLUS_3                           55                             83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 30(13Q14.2) MUTATED       30     71     31     42     17
  DEL PEAK 30(13Q14.2) WILD-TYPE     69     57     48     66     40
D59V10, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           30                             69
  CLUS_2                           71                             57
  CLUS_3                           31                             48
  CLUS_4                           42                             66
  CLUS_5                           17                             40
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(60) Variable = DEL PEAK 31(14Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(14Q11.2) MUTATED       31     22     17      2
  DEL PEAK 31(14Q11.2) WILD-TYPE    147     80    172     40
D60V1, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           31                            147
  CLUS_2                           22                             80
  CLUS_3                           17                            172
  CLUS_4                            2                             40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 31(14Q11.2) MUTATED        4     17     12     18      9      8
  DEL PEAK 31(14Q11.2) WILD-TYPE     78     59     84     69     69     66
                                vv
clus                             CLUS_7
  DEL PEAK 31(14Q11.2) MUTATED        4
  DEL PEAK 31(14Q11.2) WILD-TYPE     14
D60V2, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                            4                             78
  CLUS_2                           17                             59
  CLUS_3                           12                             84
  CLUS_4                           18                             69
  CLUS_5                            9                             69
  CLUS_6                            8                             66
  CLUS_7                            4                             14
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(14Q11.2) MUTATED        5      9      7      6
  DEL PEAK 31(14Q11.2) WILD-TYPE     48     42     30     59
D60V3, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                            5                             48
  CLUS_2                            9                             42
  CLUS_3                            7                             30
  CLUS_4                            6                             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(14Q11.2) MUTATED        9     11      7
  DEL PEAK 31(14Q11.2) WILD-TYPE     67     71     41
D60V4, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                            9                             67
  CLUS_2                           11                             71
  CLUS_3                            7                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(14Q11.2) MUTATED       38     16     17
  DEL PEAK 31(14Q11.2) WILD-TYPE    169    118    135
D60V5, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           38                            169
  CLUS_2                           16                            118
  CLUS_3                           17                            135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(14Q11.2) MUTATED        8     18     20     25
  DEL PEAK 31(14Q11.2) WILD-TYPE     43    139    135    105
D60V6, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                            8                             43
  CLUS_2                           18                            139
  CLUS_3                           20                            135
  CLUS_4                           25                            105
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(14Q11.2) MUTATED       17     39     13
  DEL PEAK 31(14Q11.2) WILD-TYPE    128    177    133
D60V7, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           17                            128
  CLUS_2                           39                            177
  CLUS_3                           13                            133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(14Q11.2) MUTATED       20     26     23
  DEL PEAK 31(14Q11.2) WILD-TYPE    178     98    162
D60V8, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           20                            178
  CLUS_2                           26                             98
  CLUS_3                           23                            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(14Q11.2) MUTATED       18     28     19
  DEL PEAK 31(14Q11.2) WILD-TYPE    156    131    119
D60V9, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           18                            156
  CLUS_2                           28                            131
  CLUS_3                           19                            119
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 31(14Q11.2) MUTATED       12     30      7     12      4
  DEL PEAK 31(14Q11.2) WILD-TYPE     87     98     72     96     53
D60V10, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           12                             87
  CLUS_2                           30                             98
  CLUS_3                            7                             72
  CLUS_4                           12                             96
  CLUS_5                            4                             53
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(61) Variable = DEL PEAK 32(14Q32.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(14Q32.32) MUTATED       12     26     29      6
  DEL PEAK 32(14Q32.32) WILD-TYPE    166     76    160     36
D61V1, multiclass
        clus
vv       DEL PEAK 32(14Q32.32) MUTATED DEL PEAK 32(14Q32.32) WILD-TYPE
  CLUS_1                            12                             166
  CLUS_2                            26                              76
  CLUS_3                            29                             160
  CLUS_4                             6                              36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 32(14Q32.32) MUTATED        2     11      7     17     32      3
  DEL PEAK 32(14Q32.32) WILD-TYPE     80     65     89     70     46     71
                                 vv
clus                              CLUS_7
  DEL PEAK 32(14Q32.32) MUTATED        1
  DEL PEAK 32(14Q32.32) WILD-TYPE     17
D61V2, multiclass
        clus
vv       DEL PEAK 32(14Q32.32) MUTATED DEL PEAK 32(14Q32.32) WILD-TYPE
  CLUS_1                             2                              80
  CLUS_2                            11                              65
  CLUS_3                             7                              89
  CLUS_4                            17                              70
  CLUS_5                            32                              46
  CLUS_6                             3                              71
  CLUS_7                             1                              17
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(14Q32.32) MUTATED        8     14      2      6
  DEL PEAK 32(14Q32.32) WILD-TYPE     45     37     35     59
D61V3, multiclass
        clus
vv       DEL PEAK 32(14Q32.32) MUTATED DEL PEAK 32(14Q32.32) WILD-TYPE
  CLUS_1                             8                              45
  CLUS_2                            14                              37
  CLUS_3                             2                              35
  CLUS_4                             6                              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(14Q32.32) MUTATED       10     15      5
  DEL PEAK 32(14Q32.32) WILD-TYPE     66     67     43
D61V4, multiclass
        clus
vv       DEL PEAK 32(14Q32.32) MUTATED DEL PEAK 32(14Q32.32) WILD-TYPE
  CLUS_1                            10                              66
  CLUS_2                            15                              67
  CLUS_3                             5                              43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(14Q32.32) MUTATED       48     14      7
  DEL PEAK 32(14Q32.32) WILD-TYPE    159    120    145
D61V5, multiclass
        clus
vv       DEL PEAK 32(14Q32.32) MUTATED DEL PEAK 32(14Q32.32) WILD-TYPE
  CLUS_1                            48                             159
  CLUS_2                            14                             120
  CLUS_3                             7                             145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(14Q32.32) MUTATED        6     15      7     41
  DEL PEAK 32(14Q32.32) WILD-TYPE     45    142    148     89
D61V6, multiclass
        clus
vv       DEL PEAK 32(14Q32.32) MUTATED DEL PEAK 32(14Q32.32) WILD-TYPE
  CLUS_1                             6                              45
  CLUS_2                            15                             142
  CLUS_3                             7                             148
  CLUS_4                            41                              89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(14Q32.32) MUTATED       13     44     15
  DEL PEAK 32(14Q32.32) WILD-TYPE    132    172    131
D61V7, multiclass
        clus
vv       DEL PEAK 32(14Q32.32) MUTATED DEL PEAK 32(14Q32.32) WILD-TYPE
  CLUS_1                            13                             132
  CLUS_2                            44                             172
  CLUS_3                            15                             131
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(14Q32.32) MUTATED       20     15     37
  DEL PEAK 32(14Q32.32) WILD-TYPE    178    109    148
D61V8, multiclass
        clus
vv       DEL PEAK 32(14Q32.32) MUTATED DEL PEAK 32(14Q32.32) WILD-TYPE
  CLUS_1                            20                             178
  CLUS_2                            15                             109
  CLUS_3                            37                             148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(14Q32.32) MUTATED       17     32     16
  DEL PEAK 32(14Q32.32) WILD-TYPE    157    127    122
D61V9, multiclass
        clus
vv       DEL PEAK 32(14Q32.32) MUTATED DEL PEAK 32(14Q32.32) WILD-TYPE
  CLUS_1                            17                             157
  CLUS_2                            32                             127
  CLUS_3                            16                             122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 32(14Q32.32) MUTATED        6     24     18     13      4
  DEL PEAK 32(14Q32.32) WILD-TYPE     93    104     61     95     53
D61V10, multiclass
        clus
vv       DEL PEAK 32(14Q32.32) MUTATED DEL PEAK 32(14Q32.32) WILD-TYPE
  CLUS_1                             6                              93
  CLUS_2                            24                             104
  CLUS_3                            18                              61
  CLUS_4                            13                              95
  CLUS_5                             4                              53
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(62) Variable = DEL PEAK 33(15Q15.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(15Q15.1) MUTATED       56     26     18     19
  DEL PEAK 33(15Q15.1) WILD-TYPE    122     76    171     23
D62V1, multiclass
        clus
vv       DEL PEAK 33(15Q15.1) MUTATED DEL PEAK 33(15Q15.1) WILD-TYPE
  CLUS_1                           56                            122
  CLUS_2                           26                             76
  CLUS_3                           18                            171
  CLUS_4                           19                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 33(15Q15.1) MUTATED       16     20     24     27     14     12
  DEL PEAK 33(15Q15.1) WILD-TYPE     66     56     72     60     64     62
                                vv
clus                             CLUS_7
  DEL PEAK 33(15Q15.1) MUTATED        6
  DEL PEAK 33(15Q15.1) WILD-TYPE     12
D62V2, multiclass
        clus
vv       DEL PEAK 33(15Q15.1) MUTATED DEL PEAK 33(15Q15.1) WILD-TYPE
  CLUS_1                           16                             66
  CLUS_2                           20                             56
  CLUS_3                           24                             72
  CLUS_4                           27                             60
  CLUS_5                           14                             64
  CLUS_6                           12                             62
  CLUS_7                            6                             12
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(15Q15.1) MUTATED       13     16      8     20
  DEL PEAK 33(15Q15.1) WILD-TYPE     40     35     29     45
D62V3, multiclass
        clus
vv       DEL PEAK 33(15Q15.1) MUTATED DEL PEAK 33(15Q15.1) WILD-TYPE
  CLUS_1                           13                             40
  CLUS_2                           16                             35
  CLUS_3                            8                             29
  CLUS_4                           20                             45
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(15Q15.1) MUTATED       17     26     14
  DEL PEAK 33(15Q15.1) WILD-TYPE     59     56     34
D62V4, multiclass
        clus
vv       DEL PEAK 33(15Q15.1) MUTATED DEL PEAK 33(15Q15.1) WILD-TYPE
  CLUS_1                           17                             59
  CLUS_2                           26                             56
  CLUS_3                           14                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(15Q15.1) MUTATED       51     39     27
  DEL PEAK 33(15Q15.1) WILD-TYPE    156     95    125
D62V5, multiclass
        clus
vv       DEL PEAK 33(15Q15.1) MUTATED DEL PEAK 33(15Q15.1) WILD-TYPE
  CLUS_1                           51                            156
  CLUS_2                           39                             95
  CLUS_3                           27                            125
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(15Q15.1) MUTATED       17     41     27     32
  DEL PEAK 33(15Q15.1) WILD-TYPE     34    116    128     98
D62V6, multiclass
        clus
vv       DEL PEAK 33(15Q15.1) MUTATED DEL PEAK 33(15Q15.1) WILD-TYPE
  CLUS_1                           17                             34
  CLUS_2                           41                            116
  CLUS_3                           27                            128
  CLUS_4                           32                             98
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(15Q15.1) MUTATED       37     49     33
  DEL PEAK 33(15Q15.1) WILD-TYPE    108    167    113
D62V7, multiclass
        clus
vv       DEL PEAK 33(15Q15.1) MUTATED DEL PEAK 33(15Q15.1) WILD-TYPE
  CLUS_1                           37                            108
  CLUS_2                           49                            167
  CLUS_3                           33                            113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(15Q15.1) MUTATED       50     31     38
  DEL PEAK 33(15Q15.1) WILD-TYPE    148     93    147
D62V8, multiclass
        clus
vv       DEL PEAK 33(15Q15.1) MUTATED DEL PEAK 33(15Q15.1) WILD-TYPE
  CLUS_1                           50                            148
  CLUS_2                           31                             93
  CLUS_3                           38                            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(15Q15.1) MUTATED       40     35     36
  DEL PEAK 33(15Q15.1) WILD-TYPE    134    124    102
D62V9, multiclass
        clus
vv       DEL PEAK 33(15Q15.1) MUTATED DEL PEAK 33(15Q15.1) WILD-TYPE
  CLUS_1                           40                            134
  CLUS_2                           35                            124
  CLUS_3                           36                            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 33(15Q15.1) MUTATED       17     35     14     28     17
  DEL PEAK 33(15Q15.1) WILD-TYPE     82     93     65     80     40
D62V10, multiclass
        clus
vv       DEL PEAK 33(15Q15.1) MUTATED DEL PEAK 33(15Q15.1) WILD-TYPE
  CLUS_1                           17                             82
  CLUS_2                           35                             93
  CLUS_3                           14                             65
  CLUS_4                           28                             80
  CLUS_5                           17                             40
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(63) Variable = DEL PEAK 34(16Q23.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(16Q23.3) MUTATED       25     32     32     13
  DEL PEAK 34(16Q23.3) WILD-TYPE    153     70    157     29
D63V1, multiclass
        clus
vv       DEL PEAK 34(16Q23.3) MUTATED DEL PEAK 34(16Q23.3) WILD-TYPE
  CLUS_1                           25                            153
  CLUS_2                           32                             70
  CLUS_3                           32                            157
  CLUS_4                           13                             29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 34(16Q23.3) MUTATED        6     16      8     31     27     10
  DEL PEAK 34(16Q23.3) WILD-TYPE     76     60     88     56     51     64
                                vv
clus                             CLUS_7
  DEL PEAK 34(16Q23.3) MUTATED        4
  DEL PEAK 34(16Q23.3) WILD-TYPE     14
D63V2, multiclass
        clus
vv       DEL PEAK 34(16Q23.3) MUTATED DEL PEAK 34(16Q23.3) WILD-TYPE
  CLUS_1                            6                             76
  CLUS_2                           16                             60
  CLUS_3                            8                             88
  CLUS_4                           31                             56
  CLUS_5                           27                             51
  CLUS_6                           10                             64
  CLUS_7                            4                             14
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(16Q23.3) MUTATED        7     16      7     13
  DEL PEAK 34(16Q23.3) WILD-TYPE     46     35     30     52
D63V3, multiclass
        clus
vv       DEL PEAK 34(16Q23.3) MUTATED DEL PEAK 34(16Q23.3) WILD-TYPE
  CLUS_1                            7                             46
  CLUS_2                           16                             35
  CLUS_3                            7                             30
  CLUS_4                           13                             52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(16Q23.3) MUTATED       12     22      9
  DEL PEAK 34(16Q23.3) WILD-TYPE     64     60     39
D63V4, multiclass
        clus
vv       DEL PEAK 34(16Q23.3) MUTATED DEL PEAK 34(16Q23.3) WILD-TYPE
  CLUS_1                           12                             64
  CLUS_2                           22                             60
  CLUS_3                            9                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(16Q23.3) MUTATED       63     22     15
  DEL PEAK 34(16Q23.3) WILD-TYPE    144    112    137
D63V5, multiclass
        clus
vv       DEL PEAK 34(16Q23.3) MUTATED DEL PEAK 34(16Q23.3) WILD-TYPE
  CLUS_1                           63                            144
  CLUS_2                           22                            112
  CLUS_3                           15                            137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(16Q23.3) MUTATED       13     25     14     48
  DEL PEAK 34(16Q23.3) WILD-TYPE     38    132    141     82
D63V6, multiclass
        clus
vv       DEL PEAK 34(16Q23.3) MUTATED DEL PEAK 34(16Q23.3) WILD-TYPE
  CLUS_1                           13                             38
  CLUS_2                           25                            132
  CLUS_3                           14                            141
  CLUS_4                           48                             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(16Q23.3) MUTATED       21     58     22
  DEL PEAK 34(16Q23.3) WILD-TYPE    124    158    124
D63V7, multiclass
        clus
vv       DEL PEAK 34(16Q23.3) MUTATED DEL PEAK 34(16Q23.3) WILD-TYPE
  CLUS_1                           21                            124
  CLUS_2                           58                            158
  CLUS_3                           22                            124
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(16Q23.3) MUTATED       31     27     43
  DEL PEAK 34(16Q23.3) WILD-TYPE    167     97    142
D63V8, multiclass
        clus
vv       DEL PEAK 34(16Q23.3) MUTATED DEL PEAK 34(16Q23.3) WILD-TYPE
  CLUS_1                           31                            167
  CLUS_2                           27                             97
  CLUS_3                           43                            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(16Q23.3) MUTATED       23     43     25
  DEL PEAK 34(16Q23.3) WILD-TYPE    151    116    113
D63V9, multiclass
        clus
vv       DEL PEAK 34(16Q23.3) MUTATED DEL PEAK 34(16Q23.3) WILD-TYPE
  CLUS_1                           23                            151
  CLUS_2                           43                            116
  CLUS_3                           25                            113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 34(16Q23.3) MUTATED       13     30     21     21      6
  DEL PEAK 34(16Q23.3) WILD-TYPE     86     98     58     87     51
D63V10, multiclass
        clus
vv       DEL PEAK 34(16Q23.3) MUTATED DEL PEAK 34(16Q23.3) WILD-TYPE
  CLUS_1                           13                             86
  CLUS_2                           30                             98
  CLUS_3                           21                             58
  CLUS_4                           21                             87
  CLUS_5                            6                             51
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(64) Variable = DEL PEAK 35(17Q25.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(17Q25.3) MUTATED       29     19     16      4
  DEL PEAK 35(17Q25.3) WILD-TYPE    149     83    173     38
D64V1, multiclass
        clus
vv       DEL PEAK 35(17Q25.3) MUTATED DEL PEAK 35(17Q25.3) WILD-TYPE
  CLUS_1                           29                            149
  CLUS_2                           19                             83
  CLUS_3                           16                            173
  CLUS_4                            4                             38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 35(17Q25.3) MUTATED        3      8     10     20     19      3
  DEL PEAK 35(17Q25.3) WILD-TYPE     79     68     86     67     59     71
                                vv
clus                             CLUS_7
  DEL PEAK 35(17Q25.3) MUTATED        5
  DEL PEAK 35(17Q25.3) WILD-TYPE     13
D64V2, multiclass
        clus
vv       DEL PEAK 35(17Q25.3) MUTATED DEL PEAK 35(17Q25.3) WILD-TYPE
  CLUS_1                            3                             79
  CLUS_2                            8                             68
  CLUS_3                           10                             86
  CLUS_4                           20                             67
  CLUS_5                           19                             59
  CLUS_6                            3                             71
  CLUS_7                            5                             13
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(17Q25.3) MUTATED        5      8      2      5
  DEL PEAK 35(17Q25.3) WILD-TYPE     48     43     35     60
D64V3, multiclass
        clus
vv       DEL PEAK 35(17Q25.3) MUTATED DEL PEAK 35(17Q25.3) WILD-TYPE
  CLUS_1                            5                             48
  CLUS_2                            8                             43
  CLUS_3                            2                             35
  CLUS_4                            5                             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(17Q25.3) MUTATED        8      9      3
  DEL PEAK 35(17Q25.3) WILD-TYPE     68     73     45
D64V4, multiclass
        clus
vv       DEL PEAK 35(17Q25.3) MUTATED DEL PEAK 35(17Q25.3) WILD-TYPE
  CLUS_1                            8                             68
  CLUS_2                            9                             73
  CLUS_3                            3                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(17Q25.3) MUTATED       38     13     13
  DEL PEAK 35(17Q25.3) WILD-TYPE    169    121    139
D64V5, multiclass
        clus
vv       DEL PEAK 35(17Q25.3) MUTATED DEL PEAK 35(17Q25.3) WILD-TYPE
  CLUS_1                           38                            169
  CLUS_2                           13                            121
  CLUS_3                           13                            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(17Q25.3) MUTATED        5     12     18     29
  DEL PEAK 35(17Q25.3) WILD-TYPE     46    145    137    101
D64V6, multiclass
        clus
vv       DEL PEAK 35(17Q25.3) MUTATED DEL PEAK 35(17Q25.3) WILD-TYPE
  CLUS_1                            5                             46
  CLUS_2                           12                            145
  CLUS_3                           18                            137
  CLUS_4                           29                            101
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(17Q25.3) MUTATED       15     41     11
  DEL PEAK 35(17Q25.3) WILD-TYPE    130    175    135
D64V7, multiclass
        clus
vv       DEL PEAK 35(17Q25.3) MUTATED DEL PEAK 35(17Q25.3) WILD-TYPE
  CLUS_1                           15                            130
  CLUS_2                           41                            175
  CLUS_3                           11                            135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(17Q25.3) MUTATED       18     24     25
  DEL PEAK 35(17Q25.3) WILD-TYPE    180    100    160
D64V8, multiclass
        clus
vv       DEL PEAK 35(17Q25.3) MUTATED DEL PEAK 35(17Q25.3) WILD-TYPE
  CLUS_1                           18                            180
  CLUS_2                           24                            100
  CLUS_3                           25                            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(17Q25.3) MUTATED       22     32     10
  DEL PEAK 35(17Q25.3) WILD-TYPE    152    127    128
D64V9, multiclass
        clus
vv       DEL PEAK 35(17Q25.3) MUTATED DEL PEAK 35(17Q25.3) WILD-TYPE
  CLUS_1                           22                            152
  CLUS_2                           32                            127
  CLUS_3                           10                            128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 35(17Q25.3) MUTATED        9     25     13     10      7
  DEL PEAK 35(17Q25.3) WILD-TYPE     90    103     66     98     50
D64V10, multiclass
        clus
vv       DEL PEAK 35(17Q25.3) MUTATED DEL PEAK 35(17Q25.3) WILD-TYPE
  CLUS_1                            9                             90
  CLUS_2                           25                            103
  CLUS_3                           13                             66
  CLUS_4                           10                             98
  CLUS_5                            7                             50
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(65) Variable = DEL PEAK 36(18Q21.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(18Q21.2) MUTATED      133     56     48     22
  DEL PEAK 36(18Q21.2) WILD-TYPE     45     46    141     20
D65V1, multiclass
        clus
vv       DEL PEAK 36(18Q21.2) MUTATED DEL PEAK 36(18Q21.2) WILD-TYPE
  CLUS_1                          133                             45
  CLUS_2                           56                             46
  CLUS_3                           48                            141
  CLUS_4                           22                             20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 36(18Q21.2) MUTATED       41     54     65     59      5     25
  DEL PEAK 36(18Q21.2) WILD-TYPE     41     22     31     28     73     49
                                vv
clus                             CLUS_7
  DEL PEAK 36(18Q21.2) MUTATED       10
  DEL PEAK 36(18Q21.2) WILD-TYPE      8
D65V2, multiclass
        clus
vv       DEL PEAK 36(18Q21.2) MUTATED DEL PEAK 36(18Q21.2) WILD-TYPE
  CLUS_1                           41                             41
  CLUS_2                           54                             22
  CLUS_3                           65                             31
  CLUS_4                           59                             28
  CLUS_5                            5                             73
  CLUS_6                           25                             49
  CLUS_7                           10                              8
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(18Q21.2) MUTATED       32     29     20     35
  DEL PEAK 36(18Q21.2) WILD-TYPE     21     22     17     30
D65V3, multiclass
        clus
vv       DEL PEAK 36(18Q21.2) MUTATED DEL PEAK 36(18Q21.2) WILD-TYPE
  CLUS_1                           32                             21
  CLUS_2                           29                             22
  CLUS_3                           20                             17
  CLUS_4                           35                             30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(18Q21.2) MUTATED       46     47     23
  DEL PEAK 36(18Q21.2) WILD-TYPE     30     35     25
D65V4, multiclass
        clus
vv       DEL PEAK 36(18Q21.2) MUTATED DEL PEAK 36(18Q21.2) WILD-TYPE
  CLUS_1                           46                             30
  CLUS_2                           47                             35
  CLUS_3                           23                             25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(18Q21.2) MUTATED       92     83     77
  DEL PEAK 36(18Q21.2) WILD-TYPE    115     51     75
D65V5, multiclass
        clus
vv       DEL PEAK 36(18Q21.2) MUTATED DEL PEAK 36(18Q21.2) WILD-TYPE
  CLUS_1                           92                            115
  CLUS_2                           83                             51
  CLUS_3                           77                             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(18Q21.2) MUTATED       38     97     78     39
  DEL PEAK 36(18Q21.2) WILD-TYPE     13     60     77     91
D65V6, multiclass
        clus
vv       DEL PEAK 36(18Q21.2) MUTATED DEL PEAK 36(18Q21.2) WILD-TYPE
  CLUS_1                           38                             13
  CLUS_2                           97                             60
  CLUS_3                           78                             77
  CLUS_4                           39                             91
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(18Q21.2) MUTATED       76     95     86
  DEL PEAK 36(18Q21.2) WILD-TYPE     69    121     60
D65V7, multiclass
        clus
vv       DEL PEAK 36(18Q21.2) MUTATED DEL PEAK 36(18Q21.2) WILD-TYPE
  CLUS_1                           76                             69
  CLUS_2                           95                            121
  CLUS_3                           86                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(18Q21.2) MUTATED      117     75     65
  DEL PEAK 36(18Q21.2) WILD-TYPE     81     49    120
D65V8, multiclass
        clus
vv       DEL PEAK 36(18Q21.2) MUTATED DEL PEAK 36(18Q21.2) WILD-TYPE
  CLUS_1                          117                             81
  CLUS_2                           75                             49
  CLUS_3                           65                            120
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(18Q21.2) MUTATED       88     73     78
  DEL PEAK 36(18Q21.2) WILD-TYPE     86     86     60
D65V9, multiclass
        clus
vv       DEL PEAK 36(18Q21.2) MUTATED DEL PEAK 36(18Q21.2) WILD-TYPE
  CLUS_1                           88                             86
  CLUS_2                           73                             86
  CLUS_3                           78                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 36(18Q21.2) MUTATED       51     78     18     59     33
  DEL PEAK 36(18Q21.2) WILD-TYPE     48     50     61     49     24
D65V10, multiclass
        clus
vv       DEL PEAK 36(18Q21.2) MUTATED DEL PEAK 36(18Q21.2) WILD-TYPE
  CLUS_1                           51                             48
  CLUS_2                           78                             50
  CLUS_3                           18                             61
  CLUS_4                           59                             49
  CLUS_5                           33                             24
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(66) Variable = DEL PEAK 37(18Q23) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(18Q23) MUTATED      141     63     52     22
  DEL PEAK 37(18Q23) WILD-TYPE     37     39    137     20
D66V1, multiclass
        clus
vv       DEL PEAK 37(18Q23) MUTATED DEL PEAK 37(18Q23) WILD-TYPE
  CLUS_1                        141                           37
  CLUS_2                         63                           39
  CLUS_3                         52                          137
  CLUS_4                         22                           20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 37(18Q23) MUTATED       43     55     71     65      9     24     11
  DEL PEAK 37(18Q23) WILD-TYPE     39     21     25     22     69     50      7
D66V2, multiclass
        clus
vv       DEL PEAK 37(18Q23) MUTATED DEL PEAK 37(18Q23) WILD-TYPE
  CLUS_1                         43                           39
  CLUS_2                         55                           21
  CLUS_3                         71                           25
  CLUS_4                         65                           22
  CLUS_5                          9                           69
  CLUS_6                         24                           50
  CLUS_7                         11                            7
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(18Q23) MUTATED       37     31     18     40
  DEL PEAK 37(18Q23) WILD-TYPE     16     20     19     25
D66V3, multiclass
        clus
vv       DEL PEAK 37(18Q23) MUTATED DEL PEAK 37(18Q23) WILD-TYPE
  CLUS_1                         37                           16
  CLUS_2                         31                           20
  CLUS_3                         18                           19
  CLUS_4                         40                           25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(18Q23) MUTATED       51     50     25
  DEL PEAK 37(18Q23) WILD-TYPE     25     32     23
D66V4, multiclass
        clus
vv       DEL PEAK 37(18Q23) MUTATED DEL PEAK 37(18Q23) WILD-TYPE
  CLUS_1                         51                           25
  CLUS_2                         50                           32
  CLUS_3                         25                           23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(18Q23) MUTATED       99     88     84
  DEL PEAK 37(18Q23) WILD-TYPE    108     46     68
D66V5, multiclass
        clus
vv       DEL PEAK 37(18Q23) MUTATED DEL PEAK 37(18Q23) WILD-TYPE
  CLUS_1                         99                          108
  CLUS_2                         88                           46
  CLUS_3                         84                           68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(18Q23) MUTATED       39    103     83     46
  DEL PEAK 37(18Q23) WILD-TYPE     12     54     72     84
D66V6, multiclass
        clus
vv       DEL PEAK 37(18Q23) MUTATED DEL PEAK 37(18Q23) WILD-TYPE
  CLUS_1                         39                           12
  CLUS_2                        103                           54
  CLUS_3                         83                           72
  CLUS_4                         46                           84
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(18Q23) MUTATED       83    103     90
  DEL PEAK 37(18Q23) WILD-TYPE     62    113     56
D66V7, multiclass
        clus
vv       DEL PEAK 37(18Q23) MUTATED DEL PEAK 37(18Q23) WILD-TYPE
  CLUS_1                         83                           62
  CLUS_2                        103                          113
  CLUS_3                         90                           56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(18Q23) MUTATED      123     81     72
  DEL PEAK 37(18Q23) WILD-TYPE     75     43    113
D66V8, multiclass
        clus
vv       DEL PEAK 37(18Q23) MUTATED DEL PEAK 37(18Q23) WILD-TYPE
  CLUS_1                        123                           75
  CLUS_2                         81                           43
  CLUS_3                         72                          113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(18Q23) MUTATED       99     75     82
  DEL PEAK 37(18Q23) WILD-TYPE     75     84     56
D66V9, multiclass
        clus
vv       DEL PEAK 37(18Q23) MUTATED DEL PEAK 37(18Q23) WILD-TYPE
  CLUS_1                         99                           75
  CLUS_2                         75                           84
  CLUS_3                         82                           56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 37(18Q23) MUTATED       57     82     19     64     34
  DEL PEAK 37(18Q23) WILD-TYPE     42     46     60     44     23
D66V10, multiclass
        clus
vv       DEL PEAK 37(18Q23) MUTATED DEL PEAK 37(18Q23) WILD-TYPE
  CLUS_1                         57                           42
  CLUS_2                         82                           46
  CLUS_3                         19                           60
  CLUS_4                         64                           44
  CLUS_5                         34                           23
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(67) Variable = DEL PEAK 38(19P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(19P13.3) MUTATED       79     37     32     17
  DEL PEAK 38(19P13.3) WILD-TYPE     99     65    157     25
D67V1, multiclass
        clus
vv       DEL PEAK 38(19P13.3) MUTATED DEL PEAK 38(19P13.3) WILD-TYPE
  CLUS_1                           79                             99
  CLUS_2                           37                             65
  CLUS_3                           32                            157
  CLUS_4                           17                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 38(19P13.3) MUTATED       15     26     49     38     13     19
  DEL PEAK 38(19P13.3) WILD-TYPE     67     50     47     49     65     55
                                vv
clus                             CLUS_7
  DEL PEAK 38(19P13.3) MUTATED        5
  DEL PEAK 38(19P13.3) WILD-TYPE     13
D67V2, multiclass
        clus
vv       DEL PEAK 38(19P13.3) MUTATED DEL PEAK 38(19P13.3) WILD-TYPE
  CLUS_1                           15                             67
  CLUS_2                           26                             50
  CLUS_3                           49                             47
  CLUS_4                           38                             49
  CLUS_5                           13                             65
  CLUS_6                           19                             55
  CLUS_7                            5                             13
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(19P13.3) MUTATED       20     19     18     21
  DEL PEAK 38(19P13.3) WILD-TYPE     33     32     19     44
D67V3, multiclass
        clus
vv       DEL PEAK 38(19P13.3) MUTATED DEL PEAK 38(19P13.3) WILD-TYPE
  CLUS_1                           20                             33
  CLUS_2                           19                             32
  CLUS_3                           18                             19
  CLUS_4                           21                             44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(19P13.3) MUTATED       33     28     17
  DEL PEAK 38(19P13.3) WILD-TYPE     43     54     31
D67V4, multiclass
        clus
vv       DEL PEAK 38(19P13.3) MUTATED DEL PEAK 38(19P13.3) WILD-TYPE
  CLUS_1                           33                             43
  CLUS_2                           28                             54
  CLUS_3                           17                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(19P13.3) MUTATED       57     56     46
  DEL PEAK 38(19P13.3) WILD-TYPE    150     78    106
D67V5, multiclass
        clus
vv       DEL PEAK 38(19P13.3) MUTATED DEL PEAK 38(19P13.3) WILD-TYPE
  CLUS_1                           57                            150
  CLUS_2                           56                             78
  CLUS_3                           46                            106
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(19P13.3) MUTATED       20     62     47     30
  DEL PEAK 38(19P13.3) WILD-TYPE     31     95    108    100
D67V6, multiclass
        clus
vv       DEL PEAK 38(19P13.3) MUTATED DEL PEAK 38(19P13.3) WILD-TYPE
  CLUS_1                           20                             31
  CLUS_2                           62                             95
  CLUS_3                           47                            108
  CLUS_4                           30                            100
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(19P13.3) MUTATED       43     64     55
  DEL PEAK 38(19P13.3) WILD-TYPE    102    152     91
D67V7, multiclass
        clus
vv       DEL PEAK 38(19P13.3) MUTATED DEL PEAK 38(19P13.3) WILD-TYPE
  CLUS_1                           43                            102
  CLUS_2                           64                            152
  CLUS_3                           55                             91
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(19P13.3) MUTATED       75     50     37
  DEL PEAK 38(19P13.3) WILD-TYPE    123     74    148
D67V8, multiclass
        clus
vv       DEL PEAK 38(19P13.3) MUTATED DEL PEAK 38(19P13.3) WILD-TYPE
  CLUS_1                           75                            123
  CLUS_2                           50                             74
  CLUS_3                           37                            148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(19P13.3) MUTATED       58     45     46
  DEL PEAK 38(19P13.3) WILD-TYPE    116    114     92
D67V9, multiclass
        clus
vv       DEL PEAK 38(19P13.3) MUTATED DEL PEAK 38(19P13.3) WILD-TYPE
  CLUS_1                           58                            116
  CLUS_2                           45                            114
  CLUS_3                           46                             92
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 38(19P13.3) MUTATED       30     49     10     40     20
  DEL PEAK 38(19P13.3) WILD-TYPE     69     79     69     68     37
D67V10, multiclass
        clus
vv       DEL PEAK 38(19P13.3) MUTATED DEL PEAK 38(19P13.3) WILD-TYPE
  CLUS_1                           30                             69
  CLUS_2                           49                             79
  CLUS_3                           10                             69
  CLUS_4                           40                             68
  CLUS_5                           20                             37
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(68) Variable = DEL PEAK 39(19Q13.43) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(19Q13.43) MUTATED       48     25     13      8
  DEL PEAK 39(19Q13.43) WILD-TYPE    130     77    176     34
D68V1, multiclass
        clus
vv       DEL PEAK 39(19Q13.43) MUTATED DEL PEAK 39(19Q13.43) WILD-TYPE
  CLUS_1                            48                             130
  CLUS_2                            25                              77
  CLUS_3                            13                             176
  CLUS_4                             8                              34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 39(19Q13.43) MUTATED        7     17     27     29      5      5
  DEL PEAK 39(19Q13.43) WILD-TYPE     75     59     69     58     73     69
                                 vv
clus                              CLUS_7
  DEL PEAK 39(19Q13.43) MUTATED        4
  DEL PEAK 39(19Q13.43) WILD-TYPE     14
D68V2, multiclass
        clus
vv       DEL PEAK 39(19Q13.43) MUTATED DEL PEAK 39(19Q13.43) WILD-TYPE
  CLUS_1                             7                              75
  CLUS_2                            17                              59
  CLUS_3                            27                              69
  CLUS_4                            29                              58
  CLUS_5                             5                              73
  CLUS_6                             5                              69
  CLUS_7                             4                              14
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(19Q13.43) MUTATED       11     13     11     10
  DEL PEAK 39(19Q13.43) WILD-TYPE     42     38     26     55
D68V3, multiclass
        clus
vv       DEL PEAK 39(19Q13.43) MUTATED DEL PEAK 39(19Q13.43) WILD-TYPE
  CLUS_1                            11                              42
  CLUS_2                            13                              38
  CLUS_3                            11                              26
  CLUS_4                            10                              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(19Q13.43) MUTATED       16     16     13
  DEL PEAK 39(19Q13.43) WILD-TYPE     60     66     35
D68V4, multiclass
        clus
vv       DEL PEAK 39(19Q13.43) MUTATED DEL PEAK 39(19Q13.43) WILD-TYPE
  CLUS_1                            16                              60
  CLUS_2                            16                              66
  CLUS_3                            13                              35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(19Q13.43) MUTATED       40     25     26
  DEL PEAK 39(19Q13.43) WILD-TYPE    167    109    126
D68V5, multiclass
        clus
vv       DEL PEAK 39(19Q13.43) MUTATED DEL PEAK 39(19Q13.43) WILD-TYPE
  CLUS_1                            40                             167
  CLUS_2                            25                             109
  CLUS_3                            26                             126
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(19Q13.43) MUTATED       13     29     23     26
  DEL PEAK 39(19Q13.43) WILD-TYPE     38    128    132    104
D68V6, multiclass
        clus
vv       DEL PEAK 39(19Q13.43) MUTATED DEL PEAK 39(19Q13.43) WILD-TYPE
  CLUS_1                            13                              38
  CLUS_2                            29                             128
  CLUS_3                            23                             132
  CLUS_4                            26                             104
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(19Q13.43) MUTATED       23     43     26
  DEL PEAK 39(19Q13.43) WILD-TYPE    122    173    120
D68V7, multiclass
        clus
vv       DEL PEAK 39(19Q13.43) MUTATED DEL PEAK 39(19Q13.43) WILD-TYPE
  CLUS_1                            23                             122
  CLUS_2                            43                             173
  CLUS_3                            26                             120
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(19Q13.43) MUTATED       40     30     22
  DEL PEAK 39(19Q13.43) WILD-TYPE    158     94    163
D68V8, multiclass
        clus
vv       DEL PEAK 39(19Q13.43) MUTATED DEL PEAK 39(19Q13.43) WILD-TYPE
  CLUS_1                            40                             158
  CLUS_2                            30                              94
  CLUS_3                            22                             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(19Q13.43) MUTATED       29     33     24
  DEL PEAK 39(19Q13.43) WILD-TYPE    145    126    114
D68V9, multiclass
        clus
vv       DEL PEAK 39(19Q13.43) MUTATED DEL PEAK 39(19Q13.43) WILD-TYPE
  CLUS_1                            29                             145
  CLUS_2                            33                             126
  CLUS_3                            24                             114
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 39(19Q13.43) MUTATED       19     32      7     19      9
  DEL PEAK 39(19Q13.43) WILD-TYPE     80     96     72     89     48
D68V10, multiclass
        clus
vv       DEL PEAK 39(19Q13.43) MUTATED DEL PEAK 39(19Q13.43) WILD-TYPE
  CLUS_1                            19                              80
  CLUS_2                            32                              96
  CLUS_3                             7                              72
  CLUS_4                            19                              89
  CLUS_5                             9                              48
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(69) Variable = DEL PEAK 40(21Q22.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(21Q22.3) MUTATED       89     55     30     21
  DEL PEAK 40(21Q22.3) WILD-TYPE     89     47    159     21
D69V1, multiclass
        clus
vv       DEL PEAK 40(21Q22.3) MUTATED DEL PEAK 40(21Q22.3) WILD-TYPE
  CLUS_1                           89                             89
  CLUS_2                           55                             47
  CLUS_3                           30                            159
  CLUS_4                           21                             21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 40(21Q22.3) MUTATED       19     33     53     48     12     18
  DEL PEAK 40(21Q22.3) WILD-TYPE     63     43     43     39     66     56
                                vv
clus                             CLUS_7
  DEL PEAK 40(21Q22.3) MUTATED       12
  DEL PEAK 40(21Q22.3) WILD-TYPE      6
D69V2, multiclass
        clus
vv       DEL PEAK 40(21Q22.3) MUTATED DEL PEAK 40(21Q22.3) WILD-TYPE
  CLUS_1                           19                             63
  CLUS_2                           33                             43
  CLUS_3                           53                             43
  CLUS_4                           48                             39
  CLUS_5                           12                             66
  CLUS_6                           18                             56
  CLUS_7                           12                              6
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(21Q22.3) MUTATED       23     18     16     31
  DEL PEAK 40(21Q22.3) WILD-TYPE     30     33     21     34
D69V3, multiclass
        clus
vv       DEL PEAK 40(21Q22.3) MUTATED DEL PEAK 40(21Q22.3) WILD-TYPE
  CLUS_1                           23                             30
  CLUS_2                           18                             33
  CLUS_3                           16                             21
  CLUS_4                           31                             34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(21Q22.3) MUTATED       31     36     21
  DEL PEAK 40(21Q22.3) WILD-TYPE     45     46     27
D69V4, multiclass
        clus
vv       DEL PEAK 40(21Q22.3) MUTATED DEL PEAK 40(21Q22.3) WILD-TYPE
  CLUS_1                           31                             45
  CLUS_2                           36                             46
  CLUS_3                           21                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(21Q22.3) MUTATED       68     62     58
  DEL PEAK 40(21Q22.3) WILD-TYPE    139     72     94
D69V5, multiclass
        clus
vv       DEL PEAK 40(21Q22.3) MUTATED DEL PEAK 40(21Q22.3) WILD-TYPE
  CLUS_1                           68                            139
  CLUS_2                           62                             72
  CLUS_3                           58                             94
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(21Q22.3) MUTATED       20     72     56     40
  DEL PEAK 40(21Q22.3) WILD-TYPE     31     85     99     90
D69V6, multiclass
        clus
vv       DEL PEAK 40(21Q22.3) MUTATED DEL PEAK 40(21Q22.3) WILD-TYPE
  CLUS_1                           20                             31
  CLUS_2                           72                             85
  CLUS_3                           56                             99
  CLUS_4                           40                             90
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(21Q22.3) MUTATED       57     77     59
  DEL PEAK 40(21Q22.3) WILD-TYPE     88    139     87
D69V7, multiclass
        clus
vv       DEL PEAK 40(21Q22.3) MUTATED DEL PEAK 40(21Q22.3) WILD-TYPE
  CLUS_1                           57                             88
  CLUS_2                           77                            139
  CLUS_3                           59                             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(21Q22.3) MUTATED       85     62     46
  DEL PEAK 40(21Q22.3) WILD-TYPE    113     62    139
D69V8, multiclass
        clus
vv       DEL PEAK 40(21Q22.3) MUTATED DEL PEAK 40(21Q22.3) WILD-TYPE
  CLUS_1                           85                            113
  CLUS_2                           62                             62
  CLUS_3                           46                            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(21Q22.3) MUTATED       68     59     54
  DEL PEAK 40(21Q22.3) WILD-TYPE    106    100     84
D69V9, multiclass
        clus
vv       DEL PEAK 40(21Q22.3) MUTATED DEL PEAK 40(21Q22.3) WILD-TYPE
  CLUS_1                           68                            106
  CLUS_2                           59                            100
  CLUS_3                           54                             84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 40(21Q22.3) MUTATED       36     59     14     45     27
  DEL PEAK 40(21Q22.3) WILD-TYPE     63     69     65     63     30
D69V10, multiclass
        clus
vv       DEL PEAK 40(21Q22.3) MUTATED DEL PEAK 40(21Q22.3) WILD-TYPE
  CLUS_1                           36                             63
  CLUS_2                           59                             69
  CLUS_3                           14                             65
  CLUS_4                           45                             63
  CLUS_5                           27                             30
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(70) Variable = DEL PEAK 41(22Q13.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(22Q13.31) MUTATED       35     19     17     13
  DEL PEAK 41(22Q13.31) WILD-TYPE    143     83    172     29
D70V1, multiclass
        clus
vv       DEL PEAK 41(22Q13.31) MUTATED DEL PEAK 41(22Q13.31) WILD-TYPE
  CLUS_1                            35                             143
  CLUS_2                            19                              83
  CLUS_3                            17                             172
  CLUS_4                            13                              29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 41(22Q13.31) MUTATED        8      9     26     11     14     11
  DEL PEAK 41(22Q13.31) WILD-TYPE     74     67     70     76     64     63
                                 vv
clus                              CLUS_7
  DEL PEAK 41(22Q13.31) MUTATED        5
  DEL PEAK 41(22Q13.31) WILD-TYPE     13
D70V2, multiclass
        clus
vv       DEL PEAK 41(22Q13.31) MUTATED DEL PEAK 41(22Q13.31) WILD-TYPE
  CLUS_1                             8                              74
  CLUS_2                             9                              67
  CLUS_3                            26                              70
  CLUS_4                            11                              76
  CLUS_5                            14                              64
  CLUS_6                            11                              63
  CLUS_7                             5                              13
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(22Q13.31) MUTATED        9      8      9     10
  DEL PEAK 41(22Q13.31) WILD-TYPE     44     43     28     55
D70V3, multiclass
        clus
vv       DEL PEAK 41(22Q13.31) MUTATED DEL PEAK 41(22Q13.31) WILD-TYPE
  CLUS_1                             9                              44
  CLUS_2                             8                              43
  CLUS_3                             9                              28
  CLUS_4                            10                              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(22Q13.31) MUTATED       14     13      9
  DEL PEAK 41(22Q13.31) WILD-TYPE     62     69     39
D70V4, multiclass
        clus
vv       DEL PEAK 41(22Q13.31) MUTATED DEL PEAK 41(22Q13.31) WILD-TYPE
  CLUS_1                            14                              62
  CLUS_2                            13                              69
  CLUS_3                             9                              39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(22Q13.31) MUTATED       26     20     36
  DEL PEAK 41(22Q13.31) WILD-TYPE    181    114    116
D70V5, multiclass
        clus
vv       DEL PEAK 41(22Q13.31) MUTATED DEL PEAK 41(22Q13.31) WILD-TYPE
  CLUS_1                            26                             181
  CLUS_2                            20                             114
  CLUS_3                            36                             116
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(22Q13.31) MUTATED        7     32     23     20
  DEL PEAK 41(22Q13.31) WILD-TYPE     44    125    132    110
D70V6, multiclass
        clus
vv       DEL PEAK 41(22Q13.31) MUTATED DEL PEAK 41(22Q13.31) WILD-TYPE
  CLUS_1                             7                              44
  CLUS_2                            32                             125
  CLUS_3                            23                             132
  CLUS_4                            20                             110
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(22Q13.31) MUTATED       35     28     19
  DEL PEAK 41(22Q13.31) WILD-TYPE    110    188    127
D70V7, multiclass
        clus
vv       DEL PEAK 41(22Q13.31) MUTATED DEL PEAK 41(22Q13.31) WILD-TYPE
  CLUS_1                            35                             110
  CLUS_2                            28                             188
  CLUS_3                            19                             127
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(22Q13.31) MUTATED       36     23     23
  DEL PEAK 41(22Q13.31) WILD-TYPE    162    101    162
D70V8, multiclass
        clus
vv       DEL PEAK 41(22Q13.31) MUTATED DEL PEAK 41(22Q13.31) WILD-TYPE
  CLUS_1                            36                             162
  CLUS_2                            23                             101
  CLUS_3                            23                             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(22Q13.31) MUTATED       35     25     16
  DEL PEAK 41(22Q13.31) WILD-TYPE    139    134    122
D70V9, multiclass
        clus
vv       DEL PEAK 41(22Q13.31) MUTATED DEL PEAK 41(22Q13.31) WILD-TYPE
  CLUS_1                            35                             139
  CLUS_2                            25                             134
  CLUS_3                            16                             122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 41(22Q13.31) MUTATED       16     14     16     11     19
  DEL PEAK 41(22Q13.31) WILD-TYPE     83    114     63     97     38
D70V10, multiclass
        clus
vv       DEL PEAK 41(22Q13.31) MUTATED DEL PEAK 41(22Q13.31) WILD-TYPE
  CLUS_1                            16                              83
  CLUS_2                            14                             114
  CLUS_3                            16                              63
  CLUS_4                            11                              97
  CLUS_5                            19                              38
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(71) Variable = DEL PEAK 42(XP22.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(XP22.2) MUTATED       76     37     29     10
  DEL PEAK 42(XP22.2) WILD-TYPE    102     65    160     32
D71V1, multiclass
        clus
vv       DEL PEAK 42(XP22.2) MUTATED DEL PEAK 42(XP22.2) WILD-TYPE
  CLUS_1                          76                           102
  CLUS_2                          37                            65
  CLUS_3                          29                           160
  CLUS_4                          10                            32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 42(XP22.2) MUTATED       14     23     35     47     17      9
  DEL PEAK 42(XP22.2) WILD-TYPE     68     53     61     40     61     65
                               vv
clus                            CLUS_7
  DEL PEAK 42(XP22.2) MUTATED        7
  DEL PEAK 42(XP22.2) WILD-TYPE     11
D71V2, multiclass
        clus
vv       DEL PEAK 42(XP22.2) MUTATED DEL PEAK 42(XP22.2) WILD-TYPE
  CLUS_1                          14                            68
  CLUS_2                          23                            53
  CLUS_3                          35                            61
  CLUS_4                          47                            40
  CLUS_5                          17                            61
  CLUS_6                           9                            65
  CLUS_7                           7                            11
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(XP22.2) MUTATED       14     21     10     24
  DEL PEAK 42(XP22.2) WILD-TYPE     39     30     27     41
D71V3, multiclass
        clus
vv       DEL PEAK 42(XP22.2) MUTATED DEL PEAK 42(XP22.2) WILD-TYPE
  CLUS_1                          14                            39
  CLUS_2                          21                            30
  CLUS_3                          10                            27
  CLUS_4                          24                            41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(XP22.2) MUTATED       19     39     11
  DEL PEAK 42(XP22.2) WILD-TYPE     57     43     37
D71V4, multiclass
        clus
vv       DEL PEAK 42(XP22.2) MUTATED DEL PEAK 42(XP22.2) WILD-TYPE
  CLUS_1                          19                            57
  CLUS_2                          39                            43
  CLUS_3                          11                            37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(XP22.2) MUTATED       68     46     36
  DEL PEAK 42(XP22.2) WILD-TYPE    139     88    116
D71V5, multiclass
        clus
vv       DEL PEAK 42(XP22.2) MUTATED DEL PEAK 42(XP22.2) WILD-TYPE
  CLUS_1                          68                           139
  CLUS_2                          46                            88
  CLUS_3                          36                           116
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(XP22.2) MUTATED       12     52     34     52
  DEL PEAK 42(XP22.2) WILD-TYPE     39    105    121     78
D71V6, multiclass
        clus
vv       DEL PEAK 42(XP22.2) MUTATED DEL PEAK 42(XP22.2) WILD-TYPE
  CLUS_1                          12                            39
  CLUS_2                          52                           105
  CLUS_3                          34                           121
  CLUS_4                          52                            78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(XP22.2) MUTATED       30     74     45
  DEL PEAK 42(XP22.2) WILD-TYPE    115    142    101
D71V7, multiclass
        clus
vv       DEL PEAK 42(XP22.2) MUTATED DEL PEAK 42(XP22.2) WILD-TYPE
  CLUS_1                          30                           115
  CLUS_2                          74                           142
  CLUS_3                          45                           101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(XP22.2) MUTATED       63     42     44
  DEL PEAK 42(XP22.2) WILD-TYPE    135     82    141
D71V8, multiclass
        clus
vv       DEL PEAK 42(XP22.2) MUTATED DEL PEAK 42(XP22.2) WILD-TYPE
  CLUS_1                          63                           135
  CLUS_2                          42                            82
  CLUS_3                          44                           141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(XP22.2) MUTATED       45     52     41
  DEL PEAK 42(XP22.2) WILD-TYPE    129    107     97
D71V9, multiclass
        clus
vv       DEL PEAK 42(XP22.2) MUTATED DEL PEAK 42(XP22.2) WILD-TYPE
  CLUS_1                          45                           129
  CLUS_2                          52                           107
  CLUS_3                          41                            97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 42(XP22.2) MUTATED       29     48     13     35     13
  DEL PEAK 42(XP22.2) WILD-TYPE     70     80     66     73     44
D71V10, multiclass
        clus
vv       DEL PEAK 42(XP22.2) MUTATED DEL PEAK 42(XP22.2) WILD-TYPE
  CLUS_1                          29                            70
  CLUS_2                          48                            80
  CLUS_3                          13                            66
  CLUS_4                          35                            73
  CLUS_5                          13                            44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(72) Variable = DEL PEAK 43(XP21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(XP21.3) MUTATED       81     34     30      9
  DEL PEAK 43(XP21.3) WILD-TYPE     97     68    159     33
D72V1, multiclass
        clus
vv       DEL PEAK 43(XP21.3) MUTATED DEL PEAK 43(XP21.3) WILD-TYPE
  CLUS_1                          81                            97
  CLUS_2                          34                            68
  CLUS_3                          30                           159
  CLUS_4                           9                            33
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 43(XP21.3) MUTATED       16     24     38     42     15     12
  DEL PEAK 43(XP21.3) WILD-TYPE     66     52     58     45     63     62
                               vv
clus                            CLUS_7
  DEL PEAK 43(XP21.3) MUTATED        7
  DEL PEAK 43(XP21.3) WILD-TYPE     11
D72V2, multiclass
        clus
vv       DEL PEAK 43(XP21.3) MUTATED DEL PEAK 43(XP21.3) WILD-TYPE
  CLUS_1                          16                            66
  CLUS_2                          24                            52
  CLUS_3                          38                            58
  CLUS_4                          42                            45
  CLUS_5                          15                            63
  CLUS_6                          12                            62
  CLUS_7                           7                            11
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(XP21.3) MUTATED       16     16     12     27
  DEL PEAK 43(XP21.3) WILD-TYPE     37     35     25     38
D72V3, multiclass
        clus
vv       DEL PEAK 43(XP21.3) MUTATED DEL PEAK 43(XP21.3) WILD-TYPE
  CLUS_1                          16                            37
  CLUS_2                          16                            35
  CLUS_3                          12                            25
  CLUS_4                          27                            38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(XP21.3) MUTATED       23     36     12
  DEL PEAK 43(XP21.3) WILD-TYPE     53     46     36
D72V4, multiclass
        clus
vv       DEL PEAK 43(XP21.3) MUTATED DEL PEAK 43(XP21.3) WILD-TYPE
  CLUS_1                          23                            53
  CLUS_2                          36                            46
  CLUS_3                          12                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(XP21.3) MUTATED       64     45     41
  DEL PEAK 43(XP21.3) WILD-TYPE    143     89    111
D72V5, multiclass
        clus
vv       DEL PEAK 43(XP21.3) MUTATED DEL PEAK 43(XP21.3) WILD-TYPE
  CLUS_1                          64                           143
  CLUS_2                          45                            89
  CLUS_3                          41                           111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(XP21.3) MUTATED       14     56     33     47
  DEL PEAK 43(XP21.3) WILD-TYPE     37    101    122     83
D72V6, multiclass
        clus
vv       DEL PEAK 43(XP21.3) MUTATED DEL PEAK 43(XP21.3) WILD-TYPE
  CLUS_1                          14                            37
  CLUS_2                          56                           101
  CLUS_3                          33                           122
  CLUS_4                          47                            83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(XP21.3) MUTATED       35     69     47
  DEL PEAK 43(XP21.3) WILD-TYPE    110    147     99
D72V7, multiclass
        clus
vv       DEL PEAK 43(XP21.3) MUTATED DEL PEAK 43(XP21.3) WILD-TYPE
  CLUS_1                          35                           110
  CLUS_2                          69                           147
  CLUS_3                          47                            99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(XP21.3) MUTATED       65     42     44
  DEL PEAK 43(XP21.3) WILD-TYPE    133     82    141
D72V8, multiclass
        clus
vv       DEL PEAK 43(XP21.3) MUTATED DEL PEAK 43(XP21.3) WILD-TYPE
  CLUS_1                          65                           133
  CLUS_2                          42                            82
  CLUS_3                          44                           141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(XP21.3) MUTATED       48     50     41
  DEL PEAK 43(XP21.3) WILD-TYPE    126    109     97
D72V9, multiclass
        clus
vv       DEL PEAK 43(XP21.3) MUTATED DEL PEAK 43(XP21.3) WILD-TYPE
  CLUS_1                          48                           126
  CLUS_2                          50                           109
  CLUS_3                          41                            97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 43(XP21.3) MUTATED       29     46     11     36     17
  DEL PEAK 43(XP21.3) WILD-TYPE     70     82     68     72     40
D72V10, multiclass
        clus
vv       DEL PEAK 43(XP21.3) MUTATED DEL PEAK 43(XP21.3) WILD-TYPE
  CLUS_1                          29                            70
  CLUS_2                          46                            82
  CLUS_3                          11                            68
  CLUS_4                          36                            72
  CLUS_5                          17                            40
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(73) Variable = DEL PEAK 44(XQ21.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(XQ21.33) MUTATED       36     24     13      1
  DEL PEAK 44(XQ21.33) WILD-TYPE    142     78    176     41
D73V1, multiclass
        clus
vv       DEL PEAK 44(XQ21.33) MUTATED DEL PEAK 44(XQ21.33) WILD-TYPE
  CLUS_1                           36                            142
  CLUS_2                           24                             78
  CLUS_3                           13                            176
  CLUS_4                            1                             41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 44(XQ21.33) MUTATED        4     13     14     29     11      0
  DEL PEAK 44(XQ21.33) WILD-TYPE     78     63     82     58     67     74
                                vv
clus                             CLUS_7
  DEL PEAK 44(XQ21.33) MUTATED        3
  DEL PEAK 44(XQ21.33) WILD-TYPE     15
D73V2, multiclass
        clus
vv       DEL PEAK 44(XQ21.33) MUTATED DEL PEAK 44(XQ21.33) WILD-TYPE
  CLUS_1                            4                             78
  CLUS_2                           13                             63
  CLUS_3                           14                             82
  CLUS_4                           29                             58
  CLUS_5                           11                             67
  CLUS_6                            0                             74
  CLUS_7                            3                             15
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(XQ21.33) MUTATED        6      8      3     12
  DEL PEAK 44(XQ21.33) WILD-TYPE     47     43     34     53
D73V3, multiclass
        clus
vv       DEL PEAK 44(XQ21.33) MUTATED DEL PEAK 44(XQ21.33) WILD-TYPE
  CLUS_1                            6                             47
  CLUS_2                            8                             43
  CLUS_3                            3                             34
  CLUS_4                           12                             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(XQ21.33) MUTATED        7     16      6
  DEL PEAK 44(XQ21.33) WILD-TYPE     69     66     42
D73V4, multiclass
        clus
vv       DEL PEAK 44(XQ21.33) MUTATED DEL PEAK 44(XQ21.33) WILD-TYPE
  CLUS_1                            7                             69
  CLUS_2                           16                             66
  CLUS_3                            6                             42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(XQ21.33) MUTATED       45     12     15
  DEL PEAK 44(XQ21.33) WILD-TYPE    162    122    137
D73V5, multiclass
        clus
vv       DEL PEAK 44(XQ21.33) MUTATED DEL PEAK 44(XQ21.33) WILD-TYPE
  CLUS_1                           45                            162
  CLUS_2                           12                            122
  CLUS_3                           15                            137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(XQ21.33) MUTATED        7     15     20     30
  DEL PEAK 44(XQ21.33) WILD-TYPE     44    142    135    100
D73V6, multiclass
        clus
vv       DEL PEAK 44(XQ21.33) MUTATED DEL PEAK 44(XQ21.33) WILD-TYPE
  CLUS_1                            7                             44
  CLUS_2                           15                            142
  CLUS_3                           20                            135
  CLUS_4                           30                            100
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(XQ21.33) MUTATED       14     48     11
  DEL PEAK 44(XQ21.33) WILD-TYPE    131    168    135
D73V7, multiclass
        clus
vv       DEL PEAK 44(XQ21.33) MUTATED DEL PEAK 44(XQ21.33) WILD-TYPE
  CLUS_1                           14                            131
  CLUS_2                           48                            168
  CLUS_3                           11                            135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(XQ21.33) MUTATED       20     23     30
  DEL PEAK 44(XQ21.33) WILD-TYPE    178    101    155
D73V8, multiclass
        clus
vv       DEL PEAK 44(XQ21.33) MUTATED DEL PEAK 44(XQ21.33) WILD-TYPE
  CLUS_1                           20                            178
  CLUS_2                           23                            101
  CLUS_3                           30                            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(XQ21.33) MUTATED       22     28     15
  DEL PEAK 44(XQ21.33) WILD-TYPE    152    131    123
D73V9, multiclass
        clus
vv       DEL PEAK 44(XQ21.33) MUTATED DEL PEAK 44(XQ21.33) WILD-TYPE
  CLUS_1                           22                            152
  CLUS_2                           28                            131
  CLUS_3                           15                            123
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 44(XQ21.33) MUTATED       16     31      6      8      4
  DEL PEAK 44(XQ21.33) WILD-TYPE     83     97     73    100     53
D73V10, multiclass
        clus
vv       DEL PEAK 44(XQ21.33) MUTATED DEL PEAK 44(XQ21.33) WILD-TYPE
  CLUS_1                           16                             83
  CLUS_2                           31                             97
  CLUS_3                            6                             73
  CLUS_4                            8                            100
  CLUS_5                            4                             53
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
