name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme_name	cov_idx	N_tot	N_c	nsil_tot	nnon_tot	n_tot	rate_sil	rate_non	rate_tot	log_rate_tot	n_c	n_ind	N_ind	rate_c	rate_ind
TCGA-BA-4074-01A-01D-1434-08	179	172	7	132	3.910615e-02	exome+100bp flanks	2	35929628	...	40	123	175	1.113287e-06	3.423359e-06	4.870632e-06	-5.312415e+00	...	9	32199509	...	2.795074e-07
TCGA-BA-4075-01A-01D-1434-08	209	204	5	150	2.392344e-02	coding only	1	28837536	...	54	134	205	1.872559e-06	4.646722e-06	7.108790e-06	-5.148204e+00	...	14	28781335	...	4.864264e-07
TCGA-BA-4076-01A-01D-1434-08	398	385	13	297	3.266332e-02	exome+100bp flanks	2	35929628	...	86	284	382	2.393568e-06	7.904340e-06	1.063189e-05	-4.973389e+00	...	10	32199509	...	3.105637e-07
TCGA-BA-4077-01B-01D-1434-08	383	375	8	279	2.088773e-02	coding only	1	28837536	...	94	267	374	3.259640e-06	9.258766e-06	1.296921e-05	-4.887087e+00	...	12	28781335	...	4.169369e-07
TCGA-BA-4078-01A-01D-1434-08	525	503	22	380	4.190476e-02	exome+100bp flanks	2	35929628	...	123	361	505	3.423359e-06	1.004742e-05	1.405525e-05	-4.852161e+00	...	14	32199509	...	4.347892e-07
TCGA-BA-5149-01A-01D-1512-08	148	144	4	120	2.702703e-02	coding only	1	28837536	...	24	111	144	8.322486e-07	3.849150e-06	4.993492e-06	-5.301596e+00	...	8	28781335	...	2.779579e-07
TCGA-BA-5151-01A-01D-1434-08	108	103	5	74	4.629630e-02	exome+100bp flanks	2	35929628	...	28	70	104	7.793011e-07	1.948253e-06	2.894547e-06	-5.538419e+00	...	4	32199509	...	1.242255e-07
TCGA-BA-5152-01A-02D-1870-08	607	602	5	442	8.237232e-03	coding only	1	28837536	...	160	437	600	5.548324e-06	1.515386e-05	2.080622e-05	-4.681807e+00	...	3	28781335	...	1.042342e-07
TCGA-BA-5153-01A-01D-1434-08	56	55	1	44	1.785714e-02	coding only	1	28837536	...	11	42	55	3.814473e-07	1.456435e-06	1.907236e-06	-5.719595e+00	...	2	28781335	...	6.948948e-08
TCGA-BA-5555-01A-01D-1512-08	161	157	4	127	2.484472e-02	coding only	1	28837536	...	30	120	157	1.040311e-06	4.161243e-06	5.444293e-06	-5.264058e+00	...	5	28781335	...	1.737237e-07
TCGA-BA-5556-01A-01D-1512-08	170	167	3	131	1.764706e-02	coding only	1	28837536	...	35	124	164	1.213696e-06	4.299951e-06	5.687032e-06	-5.245114e+00	...	5	28781335	...	1.737237e-07
TCGA-BA-5557-01A-01D-1512-08	59	58	1	41	1.694915e-02	coding only	1	28837536	...	17	40	59	5.895095e-07	1.387081e-06	2.045945e-06	-5.689106e+00	...	1	28781335	...	3.474474e-08
TCGA-BA-5558-01A-01D-1512-08	192	186	6	124	3.125000e-02	exome+100bp flanks	2	35929628	...	62	120	187	1.725595e-06	3.339862e-06	5.204618e-06	-5.283611e+00	...	3	32199509	...	9.316912e-08
TCGA-BA-5559-01A-01D-1512-08	94	93	1	68	1.063830e-02	coding only	1	28837536	...	24	66	92	8.322486e-07	2.288684e-06	3.190286e-06	-5.496170e+00	...	2	28781335	...	6.948948e-08
TCGA-BA-6868-01B-12D-1912-08	192	186	6	137	3.125000e-02	exome+100bp flanks	2	35929628	...	48	127	185	1.335945e-06	3.534687e-06	5.148954e-06	-5.288281e+00	...	8	32199509	...	2.484510e-07
TCGA-BA-6869-01A-11D-1870-08	561	546	15	414	2.673797e-02	coding only	1	28837536	...	130	389	538	4.508013e-06	1.348936e-05	1.865624e-05	-4.729176e+00	...	16	28781335	...	5.559158e-07
TCGA-BA-6870-01A-11D-1870-08	112	110	2	81	1.785714e-02	coding only	1	28837536	...	29	71	110	1.005634e-06	2.462069e-06	3.814473e-06	-5.418565e+00	...	10	28781335	...	3.474474e-07
TCGA-BA-6871-01A-11D-1870-08	164	162	2	126	1.219512e-02	coding only	1	28837536	...	35	121	162	1.213696e-06	4.195920e-06	5.617678e-06	-5.250443e+00	...	5	28781335	...	1.737237e-07
TCGA-BA-6872-01A-11D-1870-08	200	194	6	162	3.000000e-02	exome+100bp flanks	2	35929628	...	32	148	193	8.906299e-07	4.119163e-06	5.371611e-06	-5.269895e+00	...	11	32199509	...	3.416201e-07
TCGA-BA-6873-01A-11D-1870-08	82	80	2	61	2.439024e-02	coding only	1	28837536	...	19	52	79	6.588635e-07	1.803205e-06	2.739485e-06	-5.562331e+00	...	7	28781335	...	2.432132e-07
TCGA-BA-7269-01A-11D-2012-08	113	111	2	83	1.769912e-02	coding only	1	28837536	...	28	76	111	9.709567e-07	2.635454e-06	3.849150e-06	-5.414635e+00	...	5	28781335	...	1.737237e-07
TCGA-BB-4217-01A-11D-2078-08	35	34	1	24	2.857143e-02	coding only	1	28837536	...	10	18	34	3.467703e-07	6.241865e-07	1.179019e-06	-5.928479e+00	...	6	28781335	...	2.084684e-07
TCGA-BB-4223-01A-01D-1434-08	347	344	3	256	8.645533e-03	coding only	1	28837536	...	88	252	345	3.051578e-06	8.738611e-06	1.196357e-05	-4.922139e+00	...	4	28781335	...	1.389790e-07
TCGA-BB-4224-01A-01D-1434-08	96	95	1	77	1.041667e-02	coding only	1	28837536	...	17	70	94	5.895095e-07	2.427392e-06	3.259640e-06	-5.486830e+00	...	5	28781335	...	1.737237e-07
TCGA-BB-4225-01A-01D-1434-08	94	93	1	61	1.063830e-02	coding only	1	28837536	...	32	61	93	1.109665e-06	2.115299e-06	3.224963e-06	-5.491475e+00	...	0	28781335	...	0
TCGA-BB-4227-01A-01D-1870-08	311	309	2	213	6.430868e-03	coding only	1	28837536	...	96	198	307	3.328995e-06	6.866051e-06	1.064585e-05	-4.972820e+00	...	12	28781335	...	4.169369e-07
TCGA-BB-4228-01A-01D-1434-08	49	48	1	38	2.040816e-02	coding only	1	28837536	...	10	36	49	3.467703e-07	1.248373e-06	1.699174e-06	-5.769762e+00	...	2	28781335	...	6.948948e-08
TCGA-BB-7861-01A-11D-2229-08	35	31	4	24	1.142857e-01	coding only	1	28837536	...	7	10	31	2.427392e-07	3.467703e-07	1.074988e-06	-5.968596e+00	...	12	28781335	...	4.169369e-07
TCGA-BB-7862-01A-21D-2229-08	458	448	10	328	2.183406e-02	coding only	1	28837536	...	119	296	443	4.126566e-06	1.026440e-05	1.536192e-05	-4.813554e+00	...	26	28781335	...	9.033632e-07
TCGA-BB-7863-01A-11D-2229-08	77	74	3	45	3.896104e-02	coding only	1	28837536	...	29	36	73	1.005634e-06	1.248373e-06	2.531423e-06	-5.596635e+00	...	7	28781335	...	2.432132e-07
TCGA-BB-7864-01A-11D-2229-08	97	96	1	71	1.030928e-02	coding only	1	28837536	...	25	56	97	8.669257e-07	1.941913e-06	3.363672e-06	-5.473186e+00	...	15	28781335	...	5.211711e-07
TCGA-BB-7866-01A-11D-2229-08	73	70	3	56	4.109589e-02	coding only	1	28837536	...	13	49	69	4.508013e-07	1.699174e-06	2.392715e-06	-5.621109e+00	...	6	28781335	...	2.084684e-07
TCGA-BB-7870-01A-11D-2229-08	78	76	2	55	2.564103e-02	coding only	1	28837536	...	21	48	76	7.282176e-07	1.664497e-06	2.635454e-06	-5.579145e+00	...	6	28781335	...	2.084684e-07
TCGA-BB-7871-01A-11D-2229-08	443	434	9	353	2.031603e-02	coding only	1	28837536	...	81	328	433	2.808839e-06	1.137406e-05	1.501515e-05	-4.823470e+00	...	23	28781335	...	7.991290e-07
TCGA-BB-7872-01A-11D-2229-08	79	76	3	60	3.797468e-02	coding only	1	28837536	...	16	41	75	5.548324e-07	1.421758e-06	2.600777e-06	-5.584897e+00	...	17	28781335	...	5.906606e-07
TCGA-CN-4723-01A-01D-1434-08	1067	1051	16	773	1.499531e-02	coding only	1	28837536	...	273	753	1044	9.466828e-06	2.611180e-05	3.620282e-05	-4.441258e+00	...	12	28781335	...	4.169369e-07
TCGA-CN-4725-01A-01D-1434-08	74	73	1	53	1.351351e-02	coding only	1	28837536	...	20	47	73	6.935405e-07	1.629820e-06	2.531423e-06	-5.596635e+00	...	5	28781335	...	1.737237e-07
TCGA-CN-4726-01A-01D-1434-08	101	97	4	70	3.960396e-02	coding only	1	28837536	...	27	67	99	9.362797e-07	2.323361e-06	3.433026e-06	-5.464323e+00	...	2	28781335	...	6.948948e-08
TCGA-CN-4727-01A-01D-1434-08	493	482	11	373	2.231237e-02	coding only	1	28837536	...	109	349	483	3.779796e-06	1.210228e-05	1.674900e-05	-4.776011e+00	...	21	28781335	...	7.296395e-07
TCGA-CN-4728-01A-01D-1434-08	172	166	6	124	3.488372e-02	exome+100bp flanks	2	35929628	...	42	110	165	1.168952e-06	3.061540e-06	4.592310e-06	-5.337969e+00	...	10	32199509	...	3.105637e-07
TCGA-CN-4729-01A-01D-1434-08	178	175	3	125	1.685393e-02	coding only	1	28837536	...	50	112	174	1.733851e-06	3.883827e-06	6.033803e-06	-5.219409e+00	...	10	28781335	...	3.474474e-07
TCGA-CN-4730-01A-01D-1434-08	202	196	6	154	2.970297e-02	coding only	1	28837536	...	42	148	198	1.456435e-06	5.132200e-06	6.866051e-06	-5.163293e+00	...	4	28781335	...	1.389790e-07
TCGA-CN-4731-01A-01D-1434-08	142	139	3	95	2.112676e-02	coding only	1	28837536	...	44	84	141	1.525789e-06	2.912870e-06	4.889461e-06	-5.310739e+00	...	11	28781335	...	3.821921e-07
TCGA-CN-4733-01A-02D-1870-08	49	47	2	34	4.081633e-02	coding only	1	28837536	...	13	33	48	4.508013e-07	1.144342e-06	1.664497e-06	-5.778717e+00	...	1	28781335	...	3.474474e-08
TCGA-CN-4734-01A-01D-1434-08	191	189	2	133	1.047120e-02	coding only	1	28837536	...	56	127	189	1.941913e-06	4.403982e-06	6.553958e-06	-5.183496e+00	...	6	28781335	...	2.084684e-07
TCGA-CN-4735-01A-01D-1434-08	181	176	5	130	2.762431e-02	coding only	1	28837536	...	44	126	173	1.525789e-06	4.369305e-06	5.999126e-06	-5.221912e+00	...	1	28781335	...	3.474474e-08
TCGA-CN-4736-01A-01D-1434-08	106	104	2	86	1.886792e-02	coding only	1	28837536	...	18	84	104	6.241865e-07	2.912870e-06	3.606411e-06	-5.442925e+00	...	2	28781335	...	6.948948e-08
TCGA-CN-4737-01A-01D-1434-08	58	58	0	41	0	coding only	1	28837536	...	17	37	58	5.895095e-07	1.283050e-06	2.011268e-06	-5.696530e+00	...	3	28781335	...	1.042342e-07
TCGA-CN-4738-01A-02D-1512-08	133	131	2	95	1.503759e-02	coding only	1	28837536	...	35	90	130	1.213696e-06	3.120932e-06	4.508013e-06	-5.346015e+00	...	4	28781335	...	1.389790e-07
TCGA-CN-4739-01A-02D-1512-08	251	246	5	188	1.992032e-02	coding only	1	28837536	...	57	176	243	1.976591e-06	6.103157e-06	8.426517e-06	-5.074352e+00	...	8	28781335	...	2.779579e-07
TCGA-CN-4740-01A-01D-1434-08	185	177	8	134	4.324324e-02	exome+100bp flanks	2	35929628	...	43	130	181	1.196784e-06	3.618184e-06	5.037625e-06	-5.297774e+00	...	4	32199509	...	1.242255e-07
TCGA-CN-4741-01A-01D-1434-08	210	204	6	150	2.857143e-02	coding only	1	28837536	...	52	147	204	1.803205e-06	5.097523e-06	7.074113e-06	-5.150328e+00	...	0	28781335	...	0
TCGA-CN-4742-01A-02D-1512-08	103	97	6	75	5.825243e-02	exome+100bp flanks	2	35929628	...	22	69	100	6.123080e-07	1.920421e-06	2.783218e-06	-5.555453e+00	...	5	32199509	...	1.552819e-07
TCGA-CN-5355-01A-01D-1434-08	130	124	6	97	4.615385e-02	exome+100bp flanks	2	35929628	...	27	89	126	7.514690e-07	2.477064e-06	3.506855e-06	-5.455082e+00	...	6	32199509	...	1.863382e-07
TCGA-CN-5356-01A-01D-1434-08	430	415	15	316	3.488372e-02	exome+100bp flanks	2	35929628	...	98	297	413	2.727554e-06	8.266159e-06	1.149469e-05	-4.939503e+00	...	16	32199509	...	4.969020e-07
TCGA-CN-5358-01A-01D-1512-08	65	64	1	52	1.538462e-02	coding only	1	28837536	...	12	49	63	4.161243e-07	1.699174e-06	2.184653e-06	-5.660618e+00	...	2	28781335	...	6.948948e-08
TCGA-CN-5359-01A-01D-1434-08	179	177	2	135	1.117318e-02	coding only	1	28837536	...	42	124	176	1.456435e-06	4.299951e-06	6.103157e-06	-5.214445e+00	...	9	28781335	...	3.127027e-07
TCGA-CN-5360-01A-01D-1434-08	594	576	18	444	3.030303e-02	exome+100bp flanks	2	35929628	...	131	420	576	3.646016e-06	1.168952e-05	1.603134e-05	-4.795030e+00	...	17	32199509	...	5.279584e-07
TCGA-CN-5361-01A-01D-1434-08	139	135	4	89	2.877698e-02	coding only	1	28837536	...	46	79	135	1.595143e-06	2.739485e-06	4.681399e-06	-5.329624e+00	...	9	28781335	...	3.127027e-07
TCGA-CN-5363-01A-01D-1434-08	234	229	5	164	2.136752e-02	coding only	1	28837536	...	64	149	230	2.219330e-06	5.166877e-06	7.975716e-06	-5.098230e+00	...	14	28781335	...	4.864264e-07
TCGA-CN-5364-01A-01D-1434-08	160	157	3	132	1.875000e-02	coding only	1	28837536	...	25	124	157	8.669257e-07	4.299951e-06	5.444293e-06	-5.264058e+00	...	7	28781335	...	2.432132e-07
TCGA-CN-5365-01A-01D-1434-08	102	101	1	77	9.803922e-03	coding only	1	28837536	...	22	71	100	7.628946e-07	2.462069e-06	3.467703e-06	-5.459958e+00	...	6	28781335	...	2.084684e-07
TCGA-CN-5366-01A-01D-1434-08	126	121	5	94	3.968254e-02	exome+100bp flanks	2	35929628	...	27	85	121	7.514690e-07	2.365736e-06	3.367694e-06	-5.472667e+00	...	9	32199509	...	2.795074e-07
TCGA-CN-5367-01A-01D-1434-08	132	126	6	97	4.545455e-02	exome+100bp flanks	2	35929628	...	28	90	127	7.793011e-07	2.504897e-06	3.534687e-06	-5.451649e+00	...	6	32199509	...	1.863382e-07
TCGA-CN-5369-01A-01D-1434-08	636	623	13	494	2.044025e-02	coding only	1	28837536	...	127	406	622	4.403982e-06	1.407887e-05	2.156911e-05	-4.666168e+00	...	85	28781335	...	2.953303e-06
TCGA-CN-5370-01A-01D-2012-08	123	119	4	94	3.252033e-02	coding only	1	28837536	...	25	87	122	8.669257e-07	3.016901e-06	4.230597e-06	-5.373598e+00	...	7	28781335	...	2.432132e-07
TCGA-CN-5373-01A-01D-1434-08	185	181	4	132	2.162162e-02	coding only	1	28837536	...	48	121	179	1.664497e-06	4.195920e-06	6.207188e-06	-5.207105e+00	...	10	28781335	...	3.474474e-07
TCGA-CN-5374-01A-01D-1434-08	219	209	10	149	4.566210e-02	exome+100bp flanks	2	35929628	...	60	147	212	1.669931e-06	4.091331e-06	5.900423e-06	-5.229117e+00	...	1	32199509	...	3.105637e-08
TCGA-CN-6010-01A-11D-1683-08	191	188	3	142	1.570681e-02	coding only	1	28837536	...	46	137	188	1.595143e-06	4.750753e-06	6.519281e-06	-5.185800e+00	...	5	28781335	...	1.737237e-07
TCGA-CN-6011-01A-11D-1683-08	420	409	11	307	2.619048e-02	coding only	1	28837536	...	101	300	409	3.502380e-06	1.040311e-05	1.418290e-05	-4.848235e+00	...	6	28781335	...	2.084684e-07
TCGA-CN-6012-01A-11D-1683-08	141	137	4	111	2.836879e-02	coding only	1	28837536	...	26	104	139	9.016027e-07	3.606411e-06	4.820107e-06	-5.316943e+00	...	6	28781335	...	2.084684e-07
TCGA-CN-6013-01A-11D-1683-08	226	221	5	166	2.212389e-02	coding only	1	28837536	...	53	164	218	1.837882e-06	5.687032e-06	7.559592e-06	-5.121502e+00	...	0	28781335	...	0
TCGA-CN-6016-01A-11D-1683-08	143	141	2	105	1.398601e-02	coding only	1	28837536	...	36	102	140	1.248373e-06	3.537057e-06	4.854784e-06	-5.313830e+00	...	2	28781335	...	6.948948e-08
TCGA-CN-6017-01A-11D-1683-08	9	8	1	6	1.111111e-01	coding only	1	28837536	...	2	5	9	6.935405e-08	1.733851e-07	3.120932e-07	-6.505716e+00	...	1	28781335	...	3.474474e-08
TCGA-CN-6018-01A-11D-1683-08	129	127	2	89	1.550388e-02	coding only	1	28837536	...	38	81	127	1.317727e-06	2.808839e-06	4.403982e-06	-5.356154e+00	...	7	28781335	...	2.432132e-07
TCGA-CN-6019-01A-11D-1683-08	151	150	1	122	6.622517e-03	coding only	1	28837536	...	28	116	149	9.709567e-07	4.022535e-06	5.166877e-06	-5.286772e+00	...	5	28781335	...	1.737237e-07
TCGA-CN-6020-01A-11D-1683-08	185	183	2	127	1.081081e-02	coding only	1	28837536	...	55	122	182	1.907236e-06	4.230597e-06	6.311219e-06	-5.199887e+00	...	4	28781335	...	1.389790e-07
TCGA-CN-6021-01A-11D-1683-08	333	325	8	253	2.402402e-02	coding only	1	28837536	...	70	233	321	2.427392e-06	8.079747e-06	1.113133e-05	-4.953453e+00	...	16	28781335	...	5.559158e-07
TCGA-CN-6022-01A-21D-1683-08	94	93	1	63	1.063830e-02	coding only	1	28837536	...	30	62	94	1.040311e-06	2.149976e-06	3.259640e-06	-5.486830e+00	...	1	28781335	...	3.474474e-08
TCGA-CN-6023-01A-11D-1683-08	128	124	4	105	3.125000e-02	coding only	1	28837536	...	19	96	125	6.588635e-07	3.328995e-06	4.334628e-06	-5.363048e+00	...	6	28781335	...	2.084684e-07
TCGA-CN-6024-01A-11D-1683-08	206	203	3	126	1.456311e-02	coding only	1	28837536	...	77	118	203	2.670131e-06	4.091889e-06	7.039436e-06	-5.152462e+00	...	8	28781335	...	2.779579e-07
TCGA-CN-6988-01A-11D-1912-08	182	177	5	135	2.747253e-02	coding only	1	28837536	...	42	124	177	1.456435e-06	4.299951e-06	6.137834e-06	-5.211985e+00	...	8	28781335	...	2.779579e-07
TCGA-CN-6989-01A-11D-1912-08	123	123	0	92	0	coding only	1	28837536	...	29	86	121	1.005634e-06	2.982224e-06	4.195920e-06	-5.377173e+00	...	6	28781335	...	2.084684e-07
TCGA-CN-6992-01A-11D-1912-08	408	393	15	295	3.676471e-02	exome+100bp flanks	2	35929628	...	97	279	390	2.699722e-06	7.765179e-06	1.085455e-05	-4.964388e+00	...	11	32199509	...	3.416201e-07
TCGA-CN-6994-01A-11D-1912-08	147	138	9	101	6.122449e-02	exome+100bp flanks	2	35929628	...	37	98	141	1.029791e-06	2.727554e-06	3.924338e-06	-5.406234e+00	...	2	32199509	...	6.211275e-08
TCGA-CN-6995-01A-31D-2012-08	267	260	7	207	2.621723e-02	coding only	1	28837536	...	53	198	261	1.837882e-06	6.866051e-06	9.050704e-06	-5.043318e+00	...	8	28781335	...	2.779579e-07
TCGA-CN-6996-01A-11D-1912-08	68	66	2	50	2.941176e-02	coding only	1	28837536	...	16	48	65	5.548324e-07	1.664497e-06	2.254007e-06	-5.647045e+00	...	1	28781335	...	3.474474e-08
TCGA-CN-6997-01A-11D-2012-08	164	161	3	130	1.829268e-02	coding only	1	28837536	...	31	118	161	1.074988e-06	4.091889e-06	5.583001e-06	-5.253132e+00	...	10	28781335	...	3.474474e-07
TCGA-CN-6998-01A-23D-2012-08	105	101	4	67	3.809524e-02	coding only	1	28837536	...	34	63	102	1.179019e-06	2.184653e-06	3.537057e-06	-5.451358e+00	...	4	28781335	...	1.389790e-07
TCGA-CQ-5323-01A-01D-1683-08	84	82	2	62	2.380952e-02	coding only	1	28837536	...	20	56	83	6.935405e-07	1.941913e-06	2.878193e-06	-5.540880e+00	...	6	28781335	...	2.084684e-07
TCGA-CQ-5324-01A-01D-1683-08	81	81	0	65	0	coding only	1	28837536	...	16	60	81	5.548324e-07	2.080622e-06	2.808839e-06	-5.551473e+00	...	5	28781335	...	1.737237e-07
TCGA-CQ-5325-01A-01D-1683-08	64	63	1	51	1.562500e-02	coding only	1	28837536	...	12	50	63	4.161243e-07	1.733851e-06	2.184653e-06	-5.660618e+00	...	1	28781335	...	3.474474e-08
TCGA-CQ-5326-01A-01D-1870-08	262	261	1	183	3.816794e-03	coding only	1	28837536	...	77	179	259	2.670131e-06	6.207188e-06	8.981350e-06	-5.046658e+00	...	3	28781335	...	1.042342e-07
TCGA-CQ-5327-01A-01D-1683-08	277	270	7	204	2.527076e-02	coding only	1	28837536	...	66	192	272	2.288684e-06	6.657989e-06	9.432151e-06	-5.025389e+00	...	12	28781335	...	4.169369e-07
TCGA-CQ-5329-01A-01D-1683-08	37	36	1	29	2.702703e-02	coding only	1	28837536	...	7	27	37	2.427392e-07	9.362797e-07	1.283050e-06	-5.891756e+00	...	2	28781335	...	6.948948e-08
TCGA-CQ-5330-01A-01D-1683-08	78	78	0	59	0	coding only	1	28837536	...	19	57	78	6.588635e-07	1.976591e-06	2.704808e-06	-5.567864e+00	...	2	28781335	...	6.948948e-08
TCGA-CQ-5331-01A-02D-1870-08	172	171	1	136	5.813953e-03	coding only	1	28837536	...	35	133	170	1.213696e-06	4.612045e-06	5.895095e-06	-5.229509e+00	...	2	28781335	...	6.948948e-08
TCGA-CQ-5332-01A-01D-1683-08	167	163	4	124	2.395210e-02	coding only	1	28837536	...	39	117	162	1.352404e-06	4.057212e-06	5.617678e-06	-5.250443e+00	...	4	28781335	...	1.389790e-07
TCGA-CQ-5334-01A-01D-1683-08	215	213	2	162	9.302326e-03	coding only	1	28837536	...	51	151	215	1.768528e-06	5.236231e-06	7.455561e-06	-5.127520e+00	...	11	28781335	...	3.821921e-07
TCGA-CQ-6218-01A-11D-1912-08	167	164	3	111	1.796407e-02	coding only	1	28837536	...	52	103	161	1.803205e-06	3.571734e-06	5.583001e-06	-5.253132e+00	...	5	28781335	...	1.737237e-07
TCGA-CQ-6219-01A-11D-1912-08	92	91	1	66	1.086957e-02	coding only	1	28837536	...	24	63	91	8.322486e-07	2.184653e-06	3.155609e-06	-5.500917e+00	...	3	28781335	...	1.042342e-07
TCGA-CQ-6220-01A-11D-1912-08	135	134	1	100	7.407407e-03	coding only	1	28837536	...	34	98	134	1.179019e-06	3.398349e-06	4.646722e-06	-5.332853e+00	...	2	28781335	...	6.948948e-08
TCGA-CQ-6221-01A-11D-2078-08	138	136	2	109	1.449275e-02	coding only	1	28837536	...	27	97	136	9.362797e-07	3.363672e-06	4.716076e-06	-5.326419e+00	...	12	28781335	...	4.169369e-07
TCGA-CQ-6222-01A-11D-1912-08	77	77	0	60	0	coding only	1	28837536	...	17	57	77	5.895095e-07	1.976591e-06	2.670131e-06	-5.573467e+00	...	3	28781335	...	1.042342e-07
TCGA-CQ-6223-01A-11D-1912-08	109	107	2	78	1.834862e-02	coding only	1	28837536	...	28	76	107	9.709567e-07	2.635454e-06	3.710442e-06	-5.430574e+00	...	2	28781335	...	6.948948e-08
TCGA-CQ-6224-01A-11D-1912-08	89	88	1	59	1.123596e-02	coding only	1	28837536	...	29	56	86	1.005634e-06	1.941913e-06	2.982224e-06	-5.525460e+00	...	1	28781335	...	3.474474e-08
TCGA-CQ-6225-01A-11D-1912-08	187	181	6	138	3.208556e-02	exome+100bp flanks	2	35929628	...	41	119	179	1.141120e-06	3.312030e-06	4.981961e-06	-5.302600e+00	...	18	32199509	...	5.590147e-07
TCGA-CQ-6227-01A-11D-1912-08	52	51	1	38	1.923077e-02	coding only	1	28837536	...	13	36	50	4.508013e-07	1.248373e-06	1.733851e-06	-5.760988e+00	...	1	28781335	...	3.474474e-08
TCGA-CQ-6228-01A-11D-1912-08	130	126	4	106	3.076923e-02	coding only	1	28837536	...	20	99	125	6.935405e-07	3.433026e-06	4.334628e-06	-5.363048e+00	...	2	28781335	...	6.948948e-08
TCGA-CQ-6229-01A-11D-1912-08	35	35	0	25	0	coding only	1	28837536	...	10	21	35	3.467703e-07	7.282176e-07	1.213696e-06	-5.915890e+00	...	4	28781335	...	1.389790e-07
TCGA-CQ-7065-01A-11D-2078-08	41	37	4	26	9.756098e-02	coding only	1	28837536	...	11	24	39	3.814473e-07	8.322486e-07	1.352404e-06	-5.868894e+00	...	2	28781335	...	6.948948e-08
TCGA-CQ-7067-01A-11D-2229-08	72	65	7	51	9.722222e-02	coding only	1	28837536	...	14	43	66	4.854784e-07	1.491112e-06	2.288684e-06	-5.640414e+00	...	6	28781335	...	2.084684e-07
TCGA-CQ-7068-01A-11D-2078-08	131	126	5	90	3.816794e-02	exome+100bp flanks	2	35929628	...	36	84	126	1.001959e-06	2.337903e-06	3.506855e-06	-5.455082e+00	...	5	32199509	...	1.552819e-07
TCGA-CR-5243-01A-01D-1512-08	90	88	2	66	2.222222e-02	coding only	1	28837536	...	22	61	88	7.628946e-07	2.115299e-06	3.051578e-06	-5.515475e+00	...	2	28781335	...	6.948948e-08
TCGA-CR-5247-01A-01D-2012-08	92	88	4	69	4.347826e-02	coding only	1	28837536	...	19	59	89	6.588635e-07	2.045945e-06	3.086255e-06	-5.510568e+00	...	9	28781335	...	3.127027e-07
TCGA-CR-5248-01A-01D-2012-08	396	391	5	303	1.262626e-02	coding only	1	28837536	...	88	280	389	3.051578e-06	9.709567e-06	1.348936e-05	-4.870009e+00	...	19	28781335	...	6.601501e-07
TCGA-CR-5249-01A-01D-1512-08	56	53	3	35	5.357143e-02	coding only	1	28837536	...	18	32	55	6.241865e-07	1.109665e-06	1.907236e-06	-5.719595e+00	...	3	28781335	...	1.042342e-07
TCGA-CR-5250-01A-01D-1512-08	44	41	3	33	6.818182e-02	coding only	1	28837536	...	8	28	41	2.774162e-07	9.709567e-07	1.421758e-06	-5.847174e+00	...	4	28781335	...	1.389790e-07
TCGA-CR-6467-01A-11D-1870-08	59	57	2	36	3.389831e-02	coding only	1	28837536	...	21	33	57	7.282176e-07	1.144342e-06	1.976591e-06	-5.704083e+00	...	3	28781335	...	1.042342e-07
TCGA-CR-6470-01A-11D-1870-08	48	48	0	38	0	coding only	1	28837536	...	10	36	48	3.467703e-07	1.248373e-06	1.664497e-06	-5.778717e+00	...	2	28781335	...	6.948948e-08
TCGA-CR-6471-01A-11D-1870-08	163	161	2	118	1.226994e-02	coding only	1	28837536	...	43	108	160	1.491112e-06	3.745119e-06	5.548324e-06	-5.255838e+00	...	9	28781335	...	3.127027e-07
TCGA-CR-6472-01A-11D-1870-08	551	545	6	412	1.088929e-02	coding only	1	28837536	...	132	400	545	4.577367e-06	1.387081e-05	1.889898e-05	-4.723562e+00	...	11	28781335	...	3.821921e-07
TCGA-CR-6473-01A-11D-1870-08	111	110	1	84	9.009009e-03	coding only	1	28837536	...	26	80	111	9.016027e-07	2.774162e-06	3.849150e-06	-5.414635e+00	...	4	28781335	...	1.389790e-07
TCGA-CR-6474-01A-11D-1870-08	128	128	0	98	0	coding only	1	28837536	...	30	93	127	1.040311e-06	3.224963e-06	4.403982e-06	-5.356154e+00	...	4	28781335	...	1.389790e-07
TCGA-CR-6477-01A-11D-1870-08	107	105	2	79	1.869159e-02	coding only	1	28837536	...	26	68	105	9.016027e-07	2.358038e-06	3.641088e-06	-5.438769e+00	...	10	28781335	...	3.474474e-07
TCGA-CR-6478-01A-11D-1870-08	150	146	4	94	2.666667e-02	coding only	1	28837536	...	52	91	147	1.803205e-06	3.155609e-06	5.097523e-06	-5.292641e+00	...	3	28781335	...	1.042342e-07
TCGA-CR-6480-01A-11D-1870-08	137	132	5	96	3.649635e-02	exome+100bp flanks	2	35929628	...	36	92	132	1.001959e-06	2.560561e-06	3.673848e-06	-5.434879e+00	...	3	32199509	...	9.316912e-08
TCGA-CR-6481-01A-11D-1870-08	570	559	11	429	1.929825e-02	coding only	1	28837536	...	130	426	561	4.508013e-06	1.477241e-05	1.945381e-05	-4.710995e+00	...	2	28781335	...	6.948948e-08
TCGA-CR-6482-01A-11D-1870-08	57	57	0	40	0	coding only	1	28837536	...	17	40	57	5.895095e-07	1.387081e-06	1.976591e-06	-5.704083e+00	...	0	28781335	...	0
TCGA-CR-6484-01A-11D-1870-08	326	324	2	239	6.134969e-03	coding only	1	28837536	...	84	235	323	2.912870e-06	8.149101e-06	1.120068e-05	-4.950756e+00	...	2	28781335	...	6.948948e-08
TCGA-CR-6487-01A-11D-1870-08	158	152	6	123	3.797468e-02	exome+100bp flanks	2	35929628	...	28	117	151	7.793011e-07	3.256365e-06	4.202660e-06	-5.376476e+00	...	4	32199509	...	1.242255e-07
TCGA-CR-6488-01A-12D-2078-08	45	45	0	34	0	coding only	1	28837536	...	11	32	44	3.814473e-07	1.109665e-06	1.525789e-06	-5.816505e+00	...	1	28781335	...	3.474474e-08
TCGA-CR-6491-01A-11D-1870-08	172	166	6	115	3.488372e-02	exome+100bp flanks	2	35929628	...	51	108	167	1.419441e-06	3.005876e-06	4.647975e-06	-5.332736e+00	...	7	32199509	...	2.173946e-07
TCGA-CR-6492-01A-12D-2078-08	79	78	1	58	1.265823e-02	coding only	1	28837536	...	19	57	77	6.588635e-07	1.976591e-06	2.670131e-06	-5.573467e+00	...	1	28781335	...	3.474474e-08
TCGA-CR-6493-01A-11D-1870-08	44	42	2	35	4.545455e-02	coding only	1	28837536	...	7	32	42	2.427392e-07	1.109665e-06	1.456435e-06	-5.836709e+00	...	3	28781335	...	1.042342e-07
TCGA-CR-7364-01A-11D-2012-08	534	518	16	398	2.996255e-02	coding only	1	28837536	...	120	375	519	4.161243e-06	1.300388e-05	1.799738e-05	-4.744791e+00	...	18	28781335	...	6.254053e-07
TCGA-CR-7365-01A-11D-2012-08	196	195	1	149	5.102041e-03	coding only	1	28837536	...	46	135	192	1.595143e-06	4.681399e-06	6.657989e-06	-5.176657e+00	...	11	28781335	...	3.821921e-07
TCGA-CR-7367-01A-11D-2012-08	206	200	6	156	2.912621e-02	coding only	1	28837536	...	44	147	202	1.525789e-06	5.097523e-06	7.004759e-06	-5.154607e+00	...	8	28781335	...	2.779579e-07
TCGA-CR-7368-01A-11D-2129-08	241	241	0	183	0	coding only	1	28837536	...	56	173	239	1.941913e-06	5.999126e-06	8.287809e-06	-5.081560e+00	...	10	28781335	...	3.474474e-07
TCGA-CR-7369-01A-11D-2129-08	88	87	1	68	1.136364e-02	coding only	1	28837536	...	19	63	87	6.588635e-07	2.184653e-06	3.016901e-06	-5.520439e+00	...	5	28781335	...	1.737237e-07
TCGA-CR-7370-01A-11D-2129-08	625	613	12	447	1.920000e-02	coding only	1	28837536	...	165	425	612	5.721709e-06	1.473774e-05	2.122234e-05	-4.673207e+00	...	19	28781335	...	6.601501e-07
TCGA-CR-7371-01A-11D-2012-08	345	340	5	258	1.449275e-02	coding only	1	28837536	...	82	248	337	2.843516e-06	8.599903e-06	1.168616e-05	-4.932328e+00	...	7	28781335	...	2.432132e-07
TCGA-CR-7372-01A-11D-2012-08	57	57	0	45	0	coding only	1	28837536	...	12	41	57	4.161243e-07	1.421758e-06	1.976591e-06	-5.704083e+00	...	4	28781335	...	1.389790e-07
TCGA-CR-7373-01A-11D-2012-08	139	139	0	95	0	coding only	1	28837536	...	44	90	139	1.525789e-06	3.120932e-06	4.820107e-06	-5.316943e+00	...	5	28781335	...	1.737237e-07
TCGA-CR-7374-01A-11D-2012-08	424	418	6	327	1.415094e-02	coding only	1	28837536	...	91	312	417	3.155609e-06	1.081923e-05	1.446032e-05	-4.839822e+00	...	10	28781335	...	3.474474e-07
TCGA-CR-7376-01A-11D-2129-08	74	73	1	58	1.351351e-02	coding only	1	28837536	...	15	55	72	5.201554e-07	1.907236e-06	2.496746e-06	-5.602626e+00	...	2	28781335	...	6.948948e-08
TCGA-CR-7377-01A-11D-2012-08	150	149	1	106	6.666667e-03	coding only	1	28837536	...	43	104	149	1.491112e-06	3.606411e-06	5.166877e-06	-5.286772e+00	...	1	28781335	...	3.474474e-08
TCGA-CR-7379-01A-11D-2012-08	176	173	3	117	1.704545e-02	coding only	1	28837536	...	56	112	173	1.941913e-06	3.883827e-06	5.999126e-06	-5.221912e+00	...	4	28781335	...	1.389790e-07
TCGA-CR-7380-01A-11D-2012-08	115	114	1	90	8.695652e-03	coding only	1	28837536	...	24	79	113	8.322486e-07	2.739485e-06	3.918504e-06	-5.406880e+00	...	10	28781335	...	3.474474e-07
TCGA-CR-7382-01A-11D-2129-08	103	102	1	77	9.708738e-03	coding only	1	28837536	...	25	73	102	8.669257e-07	2.531423e-06	3.537057e-06	-5.451358e+00	...	3	28781335	...	1.042342e-07
TCGA-CR-7383-01A-11D-2129-08	123	121	2	93	1.626016e-02	coding only	1	28837536	...	27	87	122	9.362797e-07	3.016901e-06	4.230597e-06	-5.373598e+00	...	4	28781335	...	1.389790e-07
TCGA-CR-7385-01A-11D-2012-08	59	58	1	44	1.694915e-02	coding only	1	28837536	...	13	41	57	4.508013e-07	1.421758e-06	1.976591e-06	-5.704083e+00	...	2	28781335	...	6.948948e-08
TCGA-CR-7386-01A-11D-2012-08	225	221	4	161	1.777778e-02	coding only	1	28837536	...	60	156	222	2.080622e-06	5.409616e-06	7.698300e-06	-5.113605e+00	...	3	28781335	...	1.042342e-07
TCGA-CR-7388-01A-11D-2012-08	853	843	10	649	1.172333e-02	coding only	1	28837536	...	192	624	838	6.657989e-06	2.163846e-05	2.905935e-05	-4.536714e+00	...	17	28781335	...	5.906606e-07
TCGA-CR-7389-01A-11D-2012-08	135	134	1	95	7.407407e-03	coding only	1	28837536	...	38	89	132	1.317727e-06	3.086255e-06	4.577367e-06	-5.339384e+00	...	5	28781335	...	1.737237e-07
TCGA-CR-7390-01A-11D-2012-08	162	159	3	108	1.851852e-02	coding only	1	28837536	...	51	102	161	1.768528e-06	3.537057e-06	5.583001e-06	-5.253132e+00	...	6	28781335	...	2.084684e-07
TCGA-CR-7391-01A-11D-2012-08	13	13	0	11	0	coding only	1	28837536	...	2	10	13	6.935405e-08	3.467703e-07	4.508013e-07	-6.346015e+00	...	1	28781335	...	3.474474e-08
TCGA-CR-7392-01A-11D-2012-08	39	39	0	32	0	coding only	1	28837536	...	7	30	39	2.427392e-07	1.040311e-06	1.352404e-06	-5.868894e+00	...	2	28781335	...	6.948948e-08
TCGA-CR-7393-01A-11D-2012-08	4	4	0	3	0	coding only	1	28837536	...	1	2	4	3.467703e-08	6.935405e-08	1.387081e-07	-6.857898e+00	...	1	28781335	...	3.474474e-08
TCGA-CR-7394-01A-11D-2012-08	212	212	0	150	0	coding only	1	28837536	...	61	149	210	2.115299e-06	5.166877e-06	7.282176e-06	-5.137739e+00	...	0	28781335	...	0
TCGA-CR-7395-01A-11D-2012-08	207	207	0	143	0	coding only	1	28837536	...	64	135	206	2.219330e-06	4.681399e-06	7.143467e-06	-5.146091e+00	...	7	28781335	...	2.432132e-07
TCGA-CR-7397-01A-11D-2012-08	55	55	0	39	0	coding only	1	28837536	...	16	39	55	5.548324e-07	1.352404e-06	1.907236e-06	-5.719595e+00	...	0	28781335	...	0
TCGA-CR-7398-01A-11D-2012-08	406	398	8	299	1.970443e-02	coding only	1	28837536	...	97	279	393	3.363672e-06	9.674890e-06	1.362807e-05	-4.865566e+00	...	17	28781335	...	5.906606e-07
TCGA-CR-7399-01A-11D-2012-08	330	323	7	255	2.121212e-02	coding only	1	28837536	...	66	244	323	2.288684e-06	8.461194e-06	1.120068e-05	-4.950756e+00	...	10	28781335	...	3.474474e-07
TCGA-CR-7401-01A-11D-2012-08	109	105	4	68	3.669725e-02	coding only	1	28837536	...	36	66	107	1.248373e-06	2.288684e-06	3.710442e-06	-5.430574e+00	...	2	28781335	...	6.948948e-08
TCGA-CR-7402-01A-11D-2012-08	1098	1079	19	842	1.730419e-02	coding only	1	28837536	...	234	797	1072	8.114424e-06	2.763759e-05	3.717377e-05	-4.429763e+00	...	40	28781335	...	1.389790e-06
TCGA-CR-7404-01A-11D-2129-08	157	152	5	112	3.184713e-02	exome+100bp flanks	2	35929628	...	40	107	151	1.113287e-06	2.978044e-06	4.202660e-06	-5.376476e+00	...	4	32199509	...	1.242255e-07
TCGA-CV-5430-01A-02D-1683-08	186	179	7	133	3.763441e-02	exome+100bp flanks	2	35929628	...	46	120	179	1.280280e-06	3.339862e-06	4.981961e-06	-5.302600e+00	...	11	32199509	...	3.416201e-07
TCGA-CV-5431-01A-01D-1512-08	108	107	1	76	9.259259e-03	coding only	1	28837536	...	31	71	106	1.074988e-06	2.462069e-06	3.675765e-06	-5.434652e+00	...	4	28781335	...	1.389790e-07
TCGA-CV-5432-01A-02D-1683-08	322	314	8	231	2.484472e-02	coding only	1	28837536	...	83	222	312	2.878193e-06	7.698300e-06	1.081923e-05	-4.965804e+00	...	5	28781335	...	1.737237e-07
TCGA-CV-5434-01A-01D-1683-08	175	171	4	139	2.285714e-02	coding only	1	28837536	...	31	130	171	1.074988e-06	4.508013e-06	5.929772e-06	-5.226962e+00	...	8	28781335	...	2.779579e-07
TCGA-CV-5435-01A-01D-1683-08	140	137	3	101	2.142857e-02	coding only	1	28837536	...	36	92	136	1.248373e-06	3.190286e-06	4.716076e-06	-5.326419e+00	...	8	28781335	...	2.779579e-07
TCGA-CV-5436-01A-01D-1512-08	135	122	13	94	9.629630e-02	exome+100bp flanks	2	35929628	...	28	83	129	7.793011e-07	2.310071e-06	3.590352e-06	-5.444863e+00	...	10	32199509	...	3.105637e-07
TCGA-CV-5439-01A-01D-1683-08	133	128	5	93	3.759398e-02	exome+100bp flanks	2	35929628	...	35	86	130	9.741264e-07	2.393568e-06	3.618184e-06	-5.441509e+00	...	6	32199509	...	1.863382e-07
TCGA-CV-5440-01A-01D-1512-08	134	132	2	100	1.492537e-02	coding only	1	28837536	...	32	93	132	1.109665e-06	3.224963e-06	4.577367e-06	-5.339384e+00	...	6	28781335	...	2.084684e-07
TCGA-CV-5441-01A-01D-1512-08	438	427	11	321	2.511416e-02	coding only	1	28837536	...	106	300	428	3.675765e-06	1.040311e-05	1.484177e-05	-4.828514e+00	...	19	28781335	...	6.601501e-07
TCGA-CV-5442-01A-01D-1512-08	311	307	4	237	1.286174e-02	coding only	1	28837536	...	70	230	308	2.427392e-06	7.975716e-06	1.068052e-05	-4.971407e+00	...	6	28781335	...	2.084684e-07
TCGA-CV-5443-01A-01D-1512-08	80	69	11	46	1.375000e-01	coding only	1	28837536	...	23	43	74	7.975716e-07	1.491112e-06	2.566100e-06	-5.590726e+00	...	2	28781335	...	6.948948e-08
TCGA-CV-5444-01A-02D-1512-08	163	157	6	108	3.680982e-02	exome+100bp flanks	2	35929628	...	49	103	158	1.363777e-06	2.866715e-06	4.397485e-06	-5.356796e+00	...	4	32199509	...	1.242255e-07
TCGA-CV-5966-01A-11D-1683-08	130	127	3	98	2.307692e-02	coding only	1	28837536	...	29	94	126	1.005634e-06	3.259640e-06	4.369305e-06	-5.359588e+00	...	3	28781335	...	1.042342e-07
TCGA-CV-5970-01A-11D-1683-08	233	230	3	170	1.287554e-02	coding only	1	28837536	...	60	164	229	2.080622e-06	5.687032e-06	7.941039e-06	-5.100123e+00	...	4	28781335	...	1.389790e-07
TCGA-CV-5971-01A-11D-1683-08	33	33	0	21	0	coding only	1	28837536	...	12	21	33	4.161243e-07	7.282176e-07	1.144342e-06	-5.941444e+00	...	0	28781335	...	0
TCGA-CV-5973-01A-11D-1683-08	74	74	0	49	0	coding only	1	28837536	...	25	40	73	8.669257e-07	1.387081e-06	2.531423e-06	-5.596635e+00	...	8	28781335	...	2.779579e-07
TCGA-CV-5976-01A-11D-1683-08	92	91	1	66	1.086957e-02	coding only	1	28837536	...	25	62	92	8.669257e-07	2.149976e-06	3.190286e-06	-5.496170e+00	...	4	28781335	...	1.389790e-07
TCGA-CV-5977-01A-11D-1683-08	111	107	4	69	3.603604e-02	coding only	1	28837536	...	38	66	107	1.317727e-06	2.288684e-06	3.710442e-06	-5.430574e+00	...	3	28781335	...	1.042342e-07
TCGA-CV-5978-01A-11D-1683-08	204	200	4	155	1.960784e-02	coding only	1	28837536	...	44	149	199	1.525789e-06	5.166877e-06	6.900728e-06	-5.161105e+00	...	5	28781335	...	1.737237e-07
TCGA-CV-5979-01A-11D-1683-08	43	42	1	35	2.325581e-02	coding only	1	28837536	...	7	35	43	2.427392e-07	1.213696e-06	1.491112e-06	-5.826490e+00	...	0	28781335	...	0
TCGA-CV-6003-01A-11D-1683-08	118	115	3	91	2.542373e-02	coding only	1	28837536	...	24	82	114	8.322486e-07	2.843516e-06	3.953181e-06	-5.403053e+00	...	8	28781335	...	2.779579e-07
TCGA-CV-6433-01A-11D-1683-08	73	72	1	53	1.369863e-02	coding only	1	28837536	...	19	49	73	6.588635e-07	1.699174e-06	2.531423e-06	-5.596635e+00	...	4	28781335	...	1.389790e-07
TCGA-CV-6436-01A-11D-1683-08	91	89	2	68	2.197802e-02	coding only	1	28837536	...	21	64	88	7.282176e-07	2.219330e-06	3.051578e-06	-5.515475e+00	...	3	28781335	...	1.042342e-07
TCGA-CV-6441-01A-11D-1683-08	267	261	6	194	2.247191e-02	coding only	1	28837536	...	66	178	260	2.288684e-06	6.172511e-06	9.016027e-06	-5.044985e+00	...	14	28781335	...	4.864264e-07
TCGA-CV-6933-01A-11D-1912-08	139	138	1	107	7.194245e-03	coding only	1	28837536	...	31	103	138	1.074988e-06	3.571734e-06	4.785430e-06	-5.320079e+00	...	4	28781335	...	1.389790e-07
TCGA-CV-6934-01A-11D-1912-08	110	109	1	86	9.090909e-03	coding only	1	28837536	...	23	79	108	7.975716e-07	2.739485e-06	3.745119e-06	-5.426534e+00	...	6	28781335	...	2.084684e-07
TCGA-CV-6935-01A-11D-1912-08	259	253	6	199	2.316602e-02	coding only	1	28837536	...	54	188	253	1.872559e-06	6.519281e-06	8.773288e-06	-5.056838e+00	...	8	28781335	...	2.779579e-07
TCGA-CV-6936-01A-11D-1912-08	326	321	5	236	1.533742e-02	coding only	1	28837536	...	85	228	322	2.947547e-06	7.906362e-06	1.116600e-05	-4.952102e+00	...	7	28781335	...	2.432132e-07
TCGA-CV-6937-01A-11D-2012-08	157	154	3	115	1.910828e-02	coding only	1	28837536	...	38	108	155	1.317727e-06	3.745119e-06	5.374939e-06	-5.269626e+00	...	7	28781335	...	2.432132e-07
TCGA-CV-6938-01A-11D-1912-08	176	175	1	143	5.681818e-03	coding only	1	28837536	...	32	131	175	1.109665e-06	4.542690e-06	6.068480e-06	-5.216920e+00	...	12	28781335	...	4.169369e-07
TCGA-CV-6939-01A-11D-1912-08	56	55	1	40	1.785714e-02	coding only	1	28837536	...	15	32	55	5.201554e-07	1.109665e-06	1.907236e-06	-5.719595e+00	...	7	28781335	...	2.432132e-07
TCGA-CV-6940-01A-11D-1912-08	156	153	3	114	1.923077e-02	coding only	1	28837536	...	39	109	153	1.352404e-06	3.779796e-06	5.305585e-06	-5.275267e+00	...	4	28781335	...	1.389790e-07
TCGA-CV-6941-01A-11D-1912-08	177	168	9	126	5.084746e-02	exome+100bp flanks	2	35929628	...	42	118	169	1.168952e-06	3.284198e-06	4.703639e-06	-5.327566e+00	...	7	32199509	...	2.173946e-07
TCGA-CV-6942-01A-21D-2012-08	265	262	3	199	1.132075e-02	coding only	1	28837536	...	63	192	263	2.184653e-06	6.657989e-06	9.120058e-06	-5.040002e+00	...	7	28781335	...	2.432132e-07
TCGA-CV-6943-01A-11D-1912-08	74	74	0	56	0	coding only	1	28837536	...	18	53	74	6.241865e-07	1.837882e-06	2.566100e-06	-5.590726e+00	...	3	28781335	...	1.042342e-07
TCGA-CV-6945-01A-11D-1912-08	161	157	4	113	2.484472e-02	coding only	1	28837536	...	43	104	156	1.491112e-06	3.606411e-06	5.409616e-06	-5.266834e+00	...	8	28781335	...	2.779579e-07
TCGA-CV-6948-01A-11D-1912-08	238	236	2	175	8.403361e-03	coding only	1	28837536	...	61	160	234	2.115299e-06	5.548324e-06	8.114424e-06	-5.090742e+00	...	13	28781335	...	4.516816e-07
TCGA-CV-6950-01A-11D-1912-08	70	69	1	53	1.428571e-02	coding only	1	28837536	...	16	50	69	5.548324e-07	1.733851e-06	2.392715e-06	-5.621109e+00	...	3	28781335	...	1.042342e-07
TCGA-CV-6951-01A-11D-1912-08	153	152	1	117	6.535948e-03	coding only	1	28837536	...	35	109	152	1.213696e-06	3.779796e-06	5.270908e-06	-5.278115e+00	...	8	28781335	...	2.779579e-07
TCGA-CV-6952-01A-11D-1912-08	201	193	8	147	3.980100e-02	exome+100bp flanks	2	35929628	...	46	136	195	1.280280e-06	3.785177e-06	5.427276e-06	-5.265418e+00	...	11	32199509	...	3.416201e-07
TCGA-CV-6953-01A-11D-1912-08	126	120	6	95	4.761905e-02	exome+100bp flanks	2	35929628	...	24	93	122	6.679724e-07	2.588393e-06	3.395526e-06	-5.469093e+00	...	1	32199509	...	3.105637e-08
TCGA-CV-6954-01A-11D-1912-08	196	190	6	149	3.061224e-02	exome+100bp flanks	2	35929628	...	41	139	188	1.141120e-06	3.868674e-06	5.232451e-06	-5.281295e+00	...	6	32199509	...	1.863382e-07
TCGA-CV-6955-01A-11D-2012-08	160	155	5	114	3.125000e-02	exome+100bp flanks	2	35929628	...	41	105	157	1.141120e-06	2.922379e-06	4.369653e-06	-5.359553e+00	...	8	32199509	...	2.484510e-07
TCGA-CV-6956-01A-21D-2012-08	224	219	5	157	2.232143e-02	coding only	1	28837536	...	62	147	221	2.149976e-06	5.097523e-06	7.663623e-06	-5.115566e+00	...	7	28781335	...	2.432132e-07
TCGA-CV-6959-01A-11D-1912-08	80	78	2	56	2.500000e-02	coding only	1	28837536	...	22	48	77	7.628946e-07	1.664497e-06	2.670131e-06	-5.573467e+00	...	6	28781335	...	2.084684e-07
TCGA-CV-6960-01A-41D-2012-08	210	204	6	156	2.857143e-02	coding only	1	28837536	...	48	141	203	1.664497e-06	4.889461e-06	7.039436e-06	-5.152462e+00	...	14	28781335	...	4.864264e-07
TCGA-CV-6961-01A-21D-1912-08	693	665	28	493	4.040404e-02	exome+100bp flanks	2	35929628	...	172	484	665	4.787136e-06	1.347078e-05	1.850840e-05	-4.732631e+00	...	7	32199509	...	2.173946e-07
TCGA-CV-6962-01A-11D-1912-08	173	169	4	143	2.312139e-02	coding only	1	28837536	...	26	125	169	9.016027e-07	4.334628e-06	5.860417e-06	-5.232071e+00	...	16	28781335	...	5.559158e-07
TCGA-CV-7089-01A-11D-2012-08	200	194	6	150	3.000000e-02	exome+100bp flanks	2	35929628	...	44	143	195	1.224616e-06	3.980002e-06	5.427276e-06	-5.265418e+00	...	6	32199509	...	1.863382e-07
TCGA-CV-7090-01A-11D-2012-08	60	58	2	42	3.333333e-02	coding only	1	28837536	...	16	40	59	5.548324e-07	1.387081e-06	2.045945e-06	-5.689106e+00	...	2	28781335	...	6.948948e-08
TCGA-CV-7091-01A-11D-2012-08	159	157	2	120	1.257862e-02	coding only	1	28837536	...	37	111	159	1.283050e-06	3.849150e-06	5.513647e-06	-5.258561e+00	...	9	28781335	...	3.127027e-07
TCGA-CV-7095-01A-21D-2012-08	285	282	3	206	1.052632e-02	coding only	1	28837536	...	73	201	280	2.531423e-06	6.970082e-06	9.709567e-06	-5.012800e+00	...	5	28781335	...	1.737237e-07
TCGA-CV-7097-01A-11D-2012-08	113	109	4	78	3.539823e-02	coding only	1	28837536	...	31	68	109	1.074988e-06	2.358038e-06	3.779796e-06	-5.422532e+00	...	9	28781335	...	3.127027e-07
TCGA-CV-7099-01A-41D-2012-08	356	349	7	254	1.966292e-02	coding only	1	28837536	...	95	241	347	3.294318e-06	8.357163e-06	1.203293e-05	-4.919629e+00	...	10	28781335	...	3.474474e-07
TCGA-CV-7100-01A-11D-2012-08	22	22	0	18	0	coding only	1	28837536	...	4	10	21	1.387081e-07	3.467703e-07	7.282176e-07	-6.137739e+00	...	7	28781335	...	2.432132e-07
TCGA-CV-7101-01A-11D-2012-08	235	229	6	179	2.553191e-02	coding only	1	28837536	...	50	168	229	1.733851e-06	5.825740e-06	7.941039e-06	-5.100123e+00	...	10	28781335	...	3.474474e-07
TCGA-CV-7102-01A-11D-2012-08	170	166	4	129	2.352941e-02	coding only	1	28837536	...	37	126	167	1.283050e-06	4.369305e-06	5.791063e-06	-5.237242e+00	...	3	28781335	...	1.042342e-07
TCGA-CV-7103-01A-21D-2012-08	57	55	2	42	3.508772e-02	coding only	1	28837536	...	13	36	55	4.508013e-07	1.248373e-06	1.907236e-06	-5.719595e+00	...	6	28781335	...	2.084684e-07
TCGA-CV-7104-01A-11D-2012-08	128	125	3	99	2.343750e-02	coding only	1	28837536	...	26	89	126	9.016027e-07	3.086255e-06	4.369305e-06	-5.359588e+00	...	9	28781335	...	3.127027e-07
TCGA-CV-7177-01A-11D-2012-08	141	136	5	103	3.546099e-02	exome+100bp flanks	2	35929628	...	33	91	139	9.184621e-07	2.532729e-06	3.868674e-06	-5.412438e+00	...	11	32199509	...	3.416201e-07
TCGA-CV-7178-01A-21D-2012-08	144	139	5	102	3.472222e-02	exome+100bp flanks	2	35929628	...	37	96	140	1.029791e-06	2.671890e-06	3.896506e-06	-5.409325e+00	...	6	32199509	...	1.863382e-07
TCGA-CV-7180-01A-11D-2012-08	77	77	0	58	0	coding only	1	28837536	...	19	56	77	6.588635e-07	1.941913e-06	2.670131e-06	-5.573467e+00	...	2	28781335	...	6.948948e-08
TCGA-CV-7183-01A-11D-2012-08	81	80	1	62	1.234568e-02	coding only	1	28837536	...	18	52	80	6.241865e-07	1.803205e-06	2.774162e-06	-5.556868e+00	...	9	28781335	...	3.127027e-07
TCGA-CV-7235-01A-11D-2012-08	161	159	2	116	1.242236e-02	coding only	1	28837536	...	43	111	159	1.491112e-06	3.849150e-06	5.513647e-06	-5.258561e+00	...	5	28781335	...	1.737237e-07
TCGA-CV-7236-01A-11D-2012-08	66	66	0	44	0	coding only	1	28837536	...	22	36	66	7.628946e-07	1.248373e-06	2.288684e-06	-5.640414e+00	...	7	28781335	...	2.432132e-07
TCGA-CV-7238-01A-11D-2012-08	82	79	3	58	3.658537e-02	coding only	1	28837536	...	21	56	80	7.282176e-07	1.941913e-06	2.774162e-06	-5.556868e+00	...	2	28781335	...	6.948948e-08
TCGA-CV-7242-01A-11D-2012-08	351	338	13	271	3.703704e-02	exome+100bp flanks	2	35929628	...	67	257	340	1.864756e-06	7.152871e-06	9.462942e-06	-5.023974e+00	...	11	32199509	...	3.416201e-07
TCGA-CV-7243-01A-11D-2012-08	88	85	3	65	3.409091e-02	coding only	1	28837536	...	20	58	86	6.935405e-07	2.011268e-06	2.982224e-06	-5.525460e+00	...	7	28781335	...	2.432132e-07
TCGA-CV-7245-01A-11D-2012-08	582	571	11	436	1.890034e-02	coding only	1	28837536	...	134	413	566	4.646722e-06	1.432161e-05	1.962720e-05	-4.707142e+00	...	14	28781335	...	4.864264e-07
TCGA-CV-7247-01A-11D-2012-08	90	84	6	67	6.666667e-02	coding only	1	28837536	...	17	59	89	5.895095e-07	2.045945e-06	3.086255e-06	-5.510568e+00	...	8	28781335	...	2.779579e-07
TCGA-CV-7248-01A-11D-2012-08	348	336	12	254	3.448276e-02	exome+100bp flanks	2	35929628	...	82	243	340	2.282239e-06	6.763221e-06	9.462942e-06	-5.023974e+00	...	9	32199509	...	2.795074e-07
TCGA-CV-7250-01A-11D-2012-08	251	245	6	180	2.390438e-02	coding only	1	28837536	...	65	165	247	2.254007e-06	5.721709e-06	8.565226e-06	-5.067261e+00	...	15	28781335	...	5.211711e-07
TCGA-CV-7252-01A-11D-2012-08	273	271	2	195	7.326007e-03	coding only	1	28837536	...	76	180	271	2.635454e-06	6.241865e-06	9.397474e-06	-5.026989e+00	...	14	28781335	...	4.864264e-07
TCGA-CV-7253-01A-11D-2012-08	224	221	3	175	1.339286e-02	coding only	1	28837536	...	45	161	220	1.560466e-06	5.583001e-06	7.628946e-06	-5.117535e+00	...	14	28781335	...	4.864264e-07
TCGA-CV-7254-01A-11D-2012-08	301	297	4	225	1.328904e-02	coding only	1	28837536	...	72	208	297	2.496746e-06	7.212822e-06	1.029908e-05	-4.987202e+00	...	14	28781335	...	4.864264e-07
TCGA-CV-7255-01A-11D-2012-08	132	131	1	103	7.575758e-03	coding only	1	28837536	...	28	84	128	9.709567e-07	2.912870e-06	4.438659e-06	-5.352748e+00	...	15	28781335	...	5.211711e-07
TCGA-CV-7261-01A-11D-2012-08	143	137	6	105	4.195804e-02	exome+100bp flanks	2	35929628	...	30	101	138	8.349655e-07	2.811051e-06	3.840841e-06	-5.415574e+00	...	3	32199509	...	9.316912e-08
TCGA-CV-7263-01A-11D-2012-08	131	126	5	104	3.816794e-02	exome+100bp flanks	2	35929628	...	22	98	129	6.123080e-07	2.727554e-06	3.590352e-06	-5.444863e+00	...	5	32199509	...	1.552819e-07
TCGA-CV-7406-01A-11D-2078-08	227	225	2	163	8.810573e-03	coding only	1	28837536	...	62	150	223	2.149976e-06	5.201554e-06	7.732977e-06	-5.111653e+00	...	11	28781335	...	3.821921e-07
TCGA-CV-7407-01A-11D-2078-08	152	150	2	107	1.315789e-02	coding only	1	28837536	...	43	101	149	1.491112e-06	3.502380e-06	5.166877e-06	-5.286772e+00	...	5	28781335	...	1.737237e-07
TCGA-CV-7409-01A-31D-2229-08	294	286	8	234	2.721088e-02	coding only	1	28837536	...	51	210	288	1.768528e-06	7.282176e-06	9.986984e-06	-5.000566e+00	...	24	28781335	...	8.338738e-07
TCGA-CV-7410-01A-21D-2078-08	49	48	1	39	2.040816e-02	coding only	1	28837536	...	9	37	49	3.120932e-07	1.283050e-06	1.699174e-06	-5.769762e+00	...	2	28781335	...	6.948948e-08
TCGA-CV-7411-01A-11D-2078-08	137	137	0	104	0	coding only	1	28837536	...	33	98	137	1.144342e-06	3.398349e-06	4.750753e-06	-5.323238e+00	...	5	28781335	...	1.737237e-07
TCGA-CV-7413-01A-11D-2078-08	87	82	5	61	5.747126e-02	coding only	1	28837536	...	19	59	82	6.588635e-07	2.045945e-06	2.843516e-06	-5.546144e+00	...	2	28781335	...	6.948948e-08
TCGA-CV-7414-01A-11D-2078-08	319	317	2	231	6.269592e-03	coding only	1	28837536	...	85	226	314	2.947547e-06	7.837008e-06	1.088859e-05	-4.963029e+00	...	2	28781335	...	6.948948e-08
TCGA-CV-7415-01A-11D-2078-08	98	98	0	69	0	coding only	1	28837536	...	29	67	98	1.005634e-06	2.323361e-06	3.398349e-06	-5.468732e+00	...	2	28781335	...	6.948948e-08
TCGA-CV-7416-01A-11D-2078-08	96	91	5	68	5.208333e-02	coding only	1	28837536	...	23	60	91	7.975716e-07	2.080622e-06	3.155609e-06	-5.500917e+00	...	6	28781335	...	2.084684e-07
TCGA-CV-7418-01A-11D-2078-08	193	188	5	142	2.590674e-02	coding only	1	28837536	...	46	130	189	1.595143e-06	4.508013e-06	6.553958e-06	-5.183496e+00	...	12	28781335	...	4.169369e-07
TCGA-CV-7421-01A-11D-2078-08	84	82	2	52	2.380952e-02	coding only	1	28837536	...	30	47	83	1.040311e-06	1.629820e-06	2.878193e-06	-5.540880e+00	...	5	28781335	...	1.737237e-07
TCGA-CV-7422-01A-21D-2078-08	163	162	1	119	6.134969e-03	coding only	1	28837536	...	43	114	160	1.491112e-06	3.953181e-06	5.548324e-06	-5.255838e+00	...	3	28781335	...	1.042342e-07
TCGA-CV-7423-01A-11D-2078-08	107	106	1	73	9.345794e-03	coding only	1	28837536	...	33	63	104	1.144342e-06	2.184653e-06	3.606411e-06	-5.442925e+00	...	7	28781335	...	2.432132e-07
TCGA-CV-7424-01A-11D-2078-08	213	211	2	155	9.389671e-03	coding only	1	28837536	...	56	150	210	1.941913e-06	5.201554e-06	7.282176e-06	-5.137739e+00	...	3	28781335	...	1.042342e-07
TCGA-CV-7425-01A-11D-2078-08	143	139	4	99	2.797203e-02	coding only	1	28837536	...	40	92	136	1.387081e-06	3.190286e-06	4.716076e-06	-5.326419e+00	...	4	28781335	...	1.389790e-07
TCGA-CV-7427-01A-11D-2078-08	519	515	4	391	7.707129e-03	coding only	1	28837536	...	124	382	512	4.299951e-06	1.324662e-05	1.775464e-05	-4.750688e+00	...	6	28781335	...	2.084684e-07
TCGA-CV-7429-01A-11D-2129-08	63	63	0	47	0	coding only	1	28837536	...	16	41	62	5.548324e-07	1.421758e-06	2.149976e-06	-5.667566e+00	...	4	28781335	...	1.389790e-07
TCGA-CV-7430-01A-11D-2129-08	125	121	4	92	3.200000e-02	coding only	1	28837536	...	29	84	120	1.005634e-06	2.912870e-06	4.161243e-06	-5.380777e+00	...	5	28781335	...	1.737237e-07
TCGA-CV-7432-01A-11D-2129-08	189	185	4	136	2.116402e-02	coding only	1	28837536	...	49	123	185	1.699174e-06	4.265274e-06	6.415250e-06	-5.192786e+00	...	12	28781335	...	4.169369e-07
TCGA-CV-7433-01A-11D-2129-08	135	135	0	99	0	coding only	1	28837536	...	36	94	134	1.248373e-06	3.259640e-06	4.646722e-06	-5.332853e+00	...	4	28781335	...	1.389790e-07
TCGA-CV-7434-01A-11D-2129-08	115	111	4	86	3.478261e-02	coding only	1	28837536	...	25	78	110	8.669257e-07	2.704808e-06	3.814473e-06	-5.418565e+00	...	5	28781335	...	1.737237e-07
TCGA-CV-7435-01A-11D-2129-08	99	96	3	76	3.030303e-02	coding only	1	28837536	...	20	69	99	6.935405e-07	2.392715e-06	3.433026e-06	-5.464323e+00	...	7	28781335	...	2.432132e-07
TCGA-CV-7437-01A-21D-2129-08	167	166	1	124	5.988024e-03	coding only	1	28837536	...	42	111	164	1.456435e-06	3.849150e-06	5.687032e-06	-5.245114e+00	...	11	28781335	...	3.821921e-07
TCGA-CV-7438-01A-21D-2129-08	129	127	2	94	1.550388e-02	coding only	1	28837536	...	33	86	126	1.144342e-06	2.982224e-06	4.369305e-06	-5.359588e+00	...	6	28781335	...	2.084684e-07
TCGA-CV-7440-01A-11D-2129-08	254	245	9	199	3.543307e-02	exome+100bp flanks	2	35929628	...	45	179	245	1.252448e-06	4.981961e-06	6.818885e-06	-5.166287e+00	...	20	32199509	...	6.211275e-07
TCGA-CX-7082-01A-11D-2012-08	113	111	2	84	1.769912e-02	coding only	1	28837536	...	27	78	111	9.362797e-07	2.704808e-06	3.849150e-06	-5.414635e+00	...	6	28781335	...	2.084684e-07
TCGA-CX-7085-01A-21D-2012-08	184	179	5	144	2.717391e-02	coding only	1	28837536	...	35	142	179	1.213696e-06	4.924138e-06	6.207188e-06	-5.207105e+00	...	1	28781335	...	3.474474e-08
TCGA-CX-7086-01A-11D-2078-08	265	259	6	201	2.264151e-02	coding only	1	28837536	...	58	189	257	2.011268e-06	6.553958e-06	8.911996e-06	-5.050025e+00	...	10	28781335	...	3.474474e-07
TCGA-CX-7219-01A-11D-2012-08	147	145	2	111	1.360544e-02	coding only	1	28837536	...	33	104	144	1.144342e-06	3.606411e-06	4.993492e-06	-5.301596e+00	...	6	28781335	...	2.084684e-07
TCGA-D6-6515-01A-21D-1870-08	65	65	0	47	0	coding only	1	28837536	...	18	45	65	6.241865e-07	1.560466e-06	2.254007e-06	-5.647045e+00	...	2	28781335	...	6.948948e-08
TCGA-D6-6516-01A-11D-1870-08	2171	2140	31	1444	1.427913e-02	coding only	1	28837536	...	690	1425	2130	2.392715e-05	4.941476e-05	7.386207e-05	-4.131579e+00	...	9	28781335	...	3.127027e-07
TCGA-D6-6517-01A-11D-1870-08	83	81	2	63	2.409639e-02	coding only	1	28837536	...	18	57	81	6.241865e-07	1.976591e-06	2.808839e-06	-5.551473e+00	...	6	28781335	...	2.084684e-07
TCGA-D6-6823-01A-11D-1912-08	118	118	0	99	0	coding only	1	28837536	...	19	94	118	6.588635e-07	3.259640e-06	4.091889e-06	-5.388076e+00	...	5	28781335	...	1.737237e-07
TCGA-D6-6824-01A-11D-1912-08	78	77	1	63	1.282051e-02	coding only	1	28837536	...	13	58	75	4.508013e-07	2.011268e-06	2.600777e-06	-5.584897e+00	...	3	28781335	...	1.042342e-07
TCGA-D6-6825-01A-21D-1912-08	87	85	2	60	2.298851e-02	coding only	1	28837536	...	25	56	85	8.669257e-07	1.941913e-06	2.947547e-06	-5.530539e+00	...	4	28781335	...	1.389790e-07
TCGA-D6-6826-01A-11D-1912-08	120	117	3	88	2.500000e-02	coding only	1	28837536	...	29	83	118	1.005634e-06	2.878193e-06	4.091889e-06	-5.388076e+00	...	5	28781335	...	1.737237e-07
TCGA-D6-6827-01A-11D-1912-08	17	17	0	12	0	coding only	1	28837536	...	5	9	17	1.733851e-07	3.120932e-07	5.895095e-07	-6.229509e+00	...	3	28781335	...	1.042342e-07
TCGA-DQ-5624-01A-01D-1870-08	121	117	4	91	3.305785e-02	coding only	1	28837536	...	26	90	119	9.016027e-07	3.120932e-06	4.126566e-06	-5.384411e+00	...	1	28781335	...	3.474474e-08
TCGA-DQ-5625-01A-01D-1870-08	226	224	2	178	8.849558e-03	coding only	1	28837536	...	46	167	223	1.595143e-06	5.791063e-06	7.732977e-06	-5.111653e+00	...	10	28781335	...	3.474474e-07
TCGA-DQ-5629-01A-01D-1870-08	390	384	6	286	1.538462e-02	coding only	1	28837536	...	98	268	383	3.398349e-06	9.293443e-06	1.328130e-05	-4.876759e+00	...	14	28781335	...	4.864264e-07
TCGA-DQ-5630-01A-01D-1870-08	96	95	1	72	1.041667e-02	coding only	1	28837536	...	23	66	94	7.975716e-07	2.288684e-06	3.259640e-06	-5.486830e+00	...	5	28781335	...	1.737237e-07
TCGA-DQ-5631-01A-01D-1870-08	115	111	4	79	3.478261e-02	coding only	1	28837536	...	32	74	114	1.109665e-06	2.566100e-06	3.953181e-06	-5.403053e+00	...	4	28781335	...	1.389790e-07
TCGA-DQ-7588-01A-11D-2078-08	126	124	2	95	1.587302e-02	coding only	1	28837536	...	29	86	123	1.005634e-06	2.982224e-06	4.265274e-06	-5.370053e+00	...	7	28781335	...	2.432132e-07
TCGA-DQ-7589-01A-11D-2229-08	220	214	6	166	2.727273e-02	coding only	1	28837536	...	48	145	214	1.664497e-06	5.028169e-06	7.420884e-06	-5.129544e+00	...	20	28781335	...	6.948948e-07
TCGA-DQ-7590-01A-11D-2229-08	34	34	0	28	0	coding only	1	28837536	...	6	21	33	2.080622e-07	7.282176e-07	1.144342e-06	-5.941444e+00	...	6	28781335	...	2.084684e-07
TCGA-DQ-7591-01A-11D-2078-08	45	44	1	34	2.222222e-02	coding only	1	28837536	...	10	32	44	3.467703e-07	1.109665e-06	1.525789e-06	-5.816505e+00	...	2	28781335	...	6.948948e-08
TCGA-DQ-7592-01A-11D-2078-08	95	93	2	65	2.105263e-02	coding only	1	28837536	...	27	58	92	9.362797e-07	2.011268e-06	3.190286e-06	-5.496170e+00	...	6	28781335	...	2.084684e-07
TCGA-DQ-7594-01A-11D-2229-08	52	51	1	30	1.923077e-02	coding only	1	28837536	...	20	27	49	6.935405e-07	9.362797e-07	1.699174e-06	-5.769762e+00	...	2	28781335	...	6.948948e-08
TCGA-DQ-7595-01A-11D-2229-08	375	373	2	299	5.333333e-03	coding only	1	28837536	...	73	269	370	2.531423e-06	9.328120e-06	1.283050e-05	-4.891756e+00	...	27	28781335	...	9.381080e-07
TCGA-F7-7848-01A-11D-2129-08	376	371	5	278	1.329787e-02	coding only	1	28837536	...	92	264	369	3.190286e-06	9.154735e-06	1.279582e-05	-4.892932e+00	...	12	28781335	...	4.169369e-07
TCGA-H7-7774-01A-21D-2078-08	177	175	2	136	1.129944e-02	coding only	1	28837536	...	39	127	175	1.352404e-06	4.403982e-06	6.068480e-06	-5.216920e+00	...	9	28781335	...	3.127027e-07
TCGA-HD-7229-01A-11D-2012-08	192	189	3	145	1.562500e-02	coding only	1	28837536	...	44	136	189	1.525789e-06	4.716076e-06	6.553958e-06	-5.183496e+00	...	7	28781335	...	2.432132e-07
TCGA-HD-7753-01A-11D-2078-08	111	107	4	89	3.603604e-02	coding only	1	28837536	...	18	77	108	6.241865e-07	2.670131e-06	3.745119e-06	-5.426534e+00	...	11	28781335	...	3.821921e-07
TCGA-HD-7754-01A-11D-2078-08	77	76	1	53	1.298701e-02	coding only	1	28837536	...	23	50	76	7.975716e-07	1.733851e-06	2.635454e-06	-5.579145e+00	...	3	28781335	...	1.042342e-07
TCGA-HD-7831-01A-11D-2129-08	47	46	1	32	2.127660e-02	coding only	1	28837536	...	14	26	46	4.854784e-07	9.016027e-07	1.595143e-06	-5.797200e+00	...	6	28781335	...	2.084684e-07
TCGA-HD-7832-01A-11D-2129-08	119	118	1	84	8.403361e-03	coding only	1	28837536	...	34	76	117	1.179019e-06	2.635454e-06	4.057212e-06	-5.391772e+00	...	7	28781335	...	2.432132e-07
TCGA-HD-7917-01A-11D-2229-08	78	77	1	59	1.282051e-02	coding only	1	28837536	...	17	49	76	5.895095e-07	1.699174e-06	2.635454e-06	-5.579145e+00	...	10	28781335	...	3.474474e-07
TCGA-HL-7533-01A-11D-2229-08	774	764	10	556	1.291990e-02	coding only	1	28837536	...	205	545	760	7.108790e-06	1.889898e-05	2.635454e-05	-4.579145e+00	...	6	28781335	...	2.084684e-07
TCGA-IQ-7630-01A-11D-2078-08	156	153	3	115	1.923077e-02	coding only	1	28837536	...	38	108	151	1.317727e-06	3.745119e-06	5.236231e-06	-5.280981e+00	...	3	28781335	...	1.042342e-07
TCGA-IQ-7631-01A-11D-2078-08	40	39	1	23	2.500000e-02	coding only	1	28837536	...	16	20	39	5.548324e-07	6.935405e-07	1.352404e-06	-5.868894e+00	...	3	28781335	...	1.042342e-07
TCGA-IQ-7632-01A-11D-2078-08	64	62	2	46	3.125000e-02	coding only	1	28837536	...	16	42	61	5.548324e-07	1.456435e-06	2.115299e-06	-5.674628e+00	...	3	28781335	...	1.042342e-07
