name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme_name	cov_idx	N_tot	N_c	nsil_tot	nnon_tot	n_tot	rate_sil	rate_non	rate_tot	log_rate_tot	n_c	n_ind	N_ind	rate_c	rate_ind
TCGA-BC-4073-01B-02D-A12Z-10	404	393	11	276	2.722772e-02	coding only	1	28837332	...	107	250	363	3.710468e-06	8.669318e-06	1.258785e-05	-4.900048e+00	...	4	28781126	...	1.389800e-07
TCGA-BC-A10Q-01A-11D-A12Z-10	508	498	10	342	1.968504e-02	coding only	1	28837332	...	143	311	459	4.958850e-06	1.078463e-05	1.591687e-05	-4.798142e+00	...	5	28781126	...	1.737250e-07
TCGA-BC-A10R-01A-11D-A12Z-10	671	661	10	473	1.490313e-02	coding only	1	28837332	...	181	425	621	6.276586e-06	1.473784e-05	2.153459e-05	-4.666863e+00	...	14	28781126	...	4.864299e-07
TCGA-BC-A10S-01A-22D-A12Z-10	6018	5850	168	2897	2.791625e-02	coding only	1	28837332	...	2782	2681	5498	9.647217e-05	9.296977e-05	1.906556e-04	-3.719750e+00	...	18	28781126	...	6.254099e-07
TCGA-BC-A10T-01A-11D-A12Z-10	368	359	9	256	2.445652e-02	coding only	1	28837332	...	98	220	336	3.398373e-06	7.629000e-06	1.165156e-05	-4.933616e+00	...	14	28781126	...	4.864299e-07
TCGA-BC-A10U-01A-11D-A12Z-10	282	269	13	217	4.609929e-02	exome+100bp flanks	2	35947376	...	47	184	255	1.307467e-06	5.118593e-06	7.093703e-06	-5.149127e+00	...	23	32215698	...	7.139377e-07
TCGA-BC-A10W-01A-11D-A12Z-10	783	766	17	551	2.171137e-02	coding only	1	28837332	...	204	514	729	7.074163e-06	1.782412e-05	2.527973e-05	-4.597228e+00	...	10	28781126	...	3.474499e-07
TCGA-BC-A10X-01A-11D-A12Z-10	196	190	6	122	3.061224e-02	exome+100bp flanks	2	35947376	...	64	112	177	1.780380e-06	3.115666e-06	4.923864e-06	-5.307694e+00	...	0	32215698	...	0
TCGA-BC-A10Y-01A-11D-A12Z-10	627	611	16	425	2.551834e-02	coding only	1	28837332	...	175	395	579	6.068523e-06	1.369752e-05	2.007814e-05	-4.697277e+00	...	7	28781126	...	2.432149e-07
TCGA-BC-A10Z-01A-11D-A12Z-10	404	387	17	298	4.207921e-02	exome+100bp flanks	2	35947376	...	86	264	373	2.392386e-06	7.344069e-06	1.037628e-05	-4.983958e+00	...	22	32215698	...	6.828969e-07
TCGA-BC-A110-01A-11D-A12Z-10	509	497	12	302	2.357564e-02	coding only	1	28837332	...	187	279	478	6.484650e-06	9.674959e-06	1.657574e-05	-4.780527e+00	...	10	28781126	...	3.474499e-07
TCGA-BC-A112-01A-11D-A12Z-10	621	597	24	482	3.864734e-02	exome+100bp flanks	2	35947376	...	109	304	561	3.032210e-06	8.456806e-06	1.560615e-05	-4.806704e+00	...	143	32215698	...	4.438830e-06
TCGA-BC-A216-01A-11D-A152-10	310	301	9	211	2.903226e-02	coding only	1	28837332	...	79	195	278	2.739504e-06	6.762068e-06	9.640282e-06	-5.015910e+00	...	4	28781126	...	1.389800e-07
TCGA-BC-A217-01A-11D-A152-10	298	288	10	207	3.355705e-02	exome+100bp flanks	2	35947376	...	77	187	271	2.142020e-06	5.202049e-06	7.538798e-06	-5.122698e+00	...	6	32215698	...	1.862446e-07
TCGA-BC-A3KF-01A-11D-A20W-10	472	468	4	326	8.474576e-03	coding only	1	28837332	...	134	313	451	4.646754e-06	1.085399e-05	1.563945e-05	-4.805779e+00	...	3	28781126	...	1.042350e-07
TCGA-BC-A3KG-01A-11D-A20W-10	357	345	12	267	3.361345e-02	exome+100bp flanks	2	35947376	...	72	177	320	2.002928e-06	4.923864e-06	8.901901e-06	-5.050517e+00	...	71	32215698	...	2.203895e-06
TCGA-BC-A5W4-01A-11D-A28X-10	140	134	6	96	4.285714e-02	exome+100bp flanks	2	35947376	...	36	85	128	1.001464e-06	2.364568e-06	3.560761e-06	-5.448457e+00	...	6	32215698	...	1.862446e-07
TCGA-BC-A69H-01A-11D-A30V-10	186	180	6	130	3.225806e-02	exome+100bp flanks	2	35947376	...	47	113	169	1.307467e-06	3.143484e-06	4.701317e-06	-5.327780e+00	...	8	32215698	...	2.483261e-07
TCGA-BC-A69I-01A-11D-A30V-10	1438	1389	49	676	3.407510e-02	exome+100bp flanks	2	35947376	...	675	620	1303	1.877745e-05	1.724743e-05	3.624743e-05	-4.440723e+00	...	5	32215698	...	1.552038e-07
TCGA-BD-A2L6-01A-11D-A20W-10	190	182	8	140	4.210526e-02	exome+100bp flanks	2	35947376	...	41	130	179	1.140556e-06	3.616397e-06	4.979501e-06	-5.302814e+00	...	7	32215698	...	2.172854e-07
TCGA-BD-A3EP-01A-11D-A22F-10	386	382	4	290	1.036269e-02	coding only	1	28837332	...	82	262	352	2.843536e-06	9.085445e-06	1.220640e-05	-4.913412e+00	...	8	28781126	...	2.779599e-07
TCGA-BD-A3ER-01A-11D-A20W-10	212	206	6	142	2.830189e-02	coding only	1	28837332	...	60	127	189	2.080636e-06	4.404014e-06	6.554004e-06	-5.183493e+00	...	2	28781126	...	6.948998e-08
TCGA-BW-A5NO-01A-11D-A27I-10	247	242	5	162	2.024291e-02	coding only	1	28837332	...	72	143	223	2.496764e-06	4.958850e-06	7.733032e-06	-5.111650e+00	...	7	28781126	...	2.432149e-07
TCGA-BW-A5NP-01A-11D-A27I-10	135	134	1	95	7.407407e-03	coding only	1	28837332	...	37	85	126	1.283059e-06	2.947568e-06	4.369336e-06	-5.359585e+00	...	4	28781126	...	1.389800e-07
TCGA-BW-A5NQ-01A-11D-A27I-10	156	153	3	109	1.923077e-02	coding only	1	28837332	...	36	91	135	1.248382e-06	3.155632e-06	4.681432e-06	-5.329621e+00	...	8	28781126	...	2.779599e-07
TCGA-CC-5258-01A-01D-A12Z-10	645	635	10	461	1.550388e-02	coding only	1	28837332	...	170	395	595	5.895136e-06	1.369752e-05	2.063298e-05	-4.685438e+00	...	30	28781126	...	1.042350e-06
TCGA-CC-5259-01A-31D-A20W-10	257	248	9	195	3.501946e-02	exome+100bp flanks	2	35947376	...	47	163	227	1.307467e-06	4.534406e-06	6.314786e-06	-5.199641e+00	...	15	32215698	...	4.656115e-07
TCGA-CC-5260-01A-01D-A12Z-10	499	489	10	332	2.004008e-02	coding only	1	28837332	...	149	297	466	5.166913e-06	1.029915e-05	1.615961e-05	-4.791569e+00	...	18	28781126	...	6.254099e-07
TCGA-CC-5261-01A-01D-A12Z-10	1246	1213	33	668	2.648475e-02	coding only	1	28837332	...	508	612	1126	1.761605e-05	2.122249e-05	3.904661e-05	-4.408417e+00	...	3	28781126	...	1.042350e-07
TCGA-CC-5262-01A-01D-A12Z-10	391	384	7	281	1.790281e-02	coding only	1	28837332	...	99	244	351	3.433050e-06	8.461254e-06	1.217172e-05	-4.914648e+00	...	6	28781126	...	2.084700e-07
TCGA-CC-5263-01A-01D-A12Z-10	544	528	16	360	2.941176e-02	coding only	1	28837332	...	155	328	490	5.374977e-06	1.137415e-05	1.699186e-05	-4.769759e+00	...	6	28781126	...	2.084700e-07
TCGA-CC-5264-01A-01D-A12Z-10	765	749	16	520	2.091503e-02	coding only	1	28837332	...	219	476	702	7.594323e-06	1.650638e-05	2.434344e-05	-4.613618e+00	...	7	28781126	...	2.432149e-07
TCGA-CC-A123-01A-11D-A12Z-10	538	522	16	361	2.973978e-02	coding only	1	28837332	...	152	325	485	5.270945e-06	1.127011e-05	1.681848e-05	-4.774213e+00	...	7	28781126	...	2.432149e-07
TCGA-CC-A1HT-01A-11D-A12Z-10	806	791	15	550	1.861042e-02	coding only	1	28837332	...	226	505	741	7.837063e-06	1.751202e-05	2.569586e-05	-4.590137e+00	...	8	28781126	...	2.779599e-07
TCGA-CC-A3M9-01A-11D-A20W-10	340	332	8	223	2.352941e-02	coding only	1	28837332	...	100	205	312	3.467727e-06	7.108841e-06	1.081931e-05	-4.965800e+00	...	6	28781126	...	2.084700e-07
TCGA-CC-A3MA-01A-11D-A20W-10	469	465	4	328	8.528785e-03	coding only	1	28837332	...	135	304	444	4.681432e-06	1.054189e-05	1.539671e-05	-4.812572e+00	...	4	28781126	...	1.389800e-07
TCGA-CC-A3MB-01A-11D-A20W-10	510	500	10	361	1.960784e-02	coding only	1	28837332	...	135	335	473	4.681432e-06	1.161689e-05	1.640235e-05	-4.785094e+00	...	3	28781126	...	1.042350e-07
TCGA-CC-A3MC-01A-11D-A22F-10	218	210	8	156	3.669725e-02	exome+100bp flanks	2	35947376	...	50	143	207	1.390922e-06	3.978037e-06	5.758418e-06	-5.239697e+00	...	9	32215698	...	2.793669e-07
TCGA-CC-A5UC-01A-11D-A28X-10	122	122	0	75	0	coding only	1	28837332	...	44	69	116	1.525800e-06	2.392732e-06	4.022564e-06	-5.395497e+00	...	3	28781126	...	1.042350e-07
TCGA-CC-A5UD-01A-11D-A28X-10	290	282	8	207	2.758621e-02	coding only	1	28837332	...	70	185	263	2.427409e-06	6.415295e-06	9.120122e-06	-5.039999e+00	...	8	28781126	...	2.779599e-07
TCGA-CC-A5UE-01A-11D-A28X-10	187	180	7	137	3.743316e-02	exome+100bp flanks	2	35947376	...	40	124	173	1.112738e-06	3.449487e-06	4.812590e-06	-5.317621e+00	...	9	32215698	...	2.793669e-07
TCGA-CC-A7IF-01A-11D-A33K-10	185	175	10	135	5.405405e-02	exome+100bp flanks	2	35947376	...	39	121	170	1.084919e-06	3.366032e-06	4.729135e-06	-5.325218e+00	...	7	32215698	...	2.172854e-07
TCGA-CC-A7IG-01A-11D-A33K-10	206	199	7	148	3.398058e-02	exome+100bp flanks	2	35947376	...	48	133	188	1.335285e-06	3.699853e-06	5.229867e-06	-5.281509e+00	...	6	32215698	...	1.862446e-07
TCGA-CC-A7IH-01A-11D-A33K-10	1024	985	39	729	3.808594e-02	exome+100bp flanks	2	35947376	...	240	661	928	6.676426e-06	1.838799e-05	2.581551e-05	-4.588119e+00	...	22	32215698	...	6.828969e-07
TCGA-CC-A7II-01A-11D-A33K-10	233	221	12	162	5.150215e-02	exome+100bp flanks	2	35947376	...	57	143	211	1.585651e-06	3.978037e-06	5.869691e-06	-5.231385e+00	...	10	32215698	...	3.104077e-07
TCGA-CC-A7IJ-01A-11D-A33Q-10	207	201	6	150	2.898551e-02	coding only	1	28837332	...	46	139	189	1.595155e-06	4.820141e-06	6.554004e-06	-5.183493e+00	...	3	28781126	...	1.042350e-07
TCGA-CC-A7IK-01A-12D-A33Q-10	409	398	11	315	2.689487e-02	coding only	1	28837332	...	79	287	378	2.739504e-06	9.952377e-06	1.310801e-05	-4.882463e+00	...	10	28781126	...	3.474499e-07
TCGA-CC-A7IL-01A-11D-A33Q-10	166	157	9	117	5.421687e-02	exome+100bp flanks	2	35947376	...	39	106	150	1.084919e-06	2.948755e-06	4.172766e-06	-5.379576e+00	...	4	32215698	...	1.241631e-07
TCGA-DD-A113-01A-11D-A12Z-10	560	536	24	385	4.285714e-02	exome+100bp flanks	2	35947376	...	142	359	507	3.950219e-06	9.986821e-06	1.410395e-05	-4.850659e+00	...	4	32215698	...	1.241631e-07
TCGA-DD-A114-01A-11D-A12Z-10	377	365	12	270	3.183024e-02	exome+100bp flanks	2	35947376	...	88	237	339	2.448023e-06	6.592971e-06	9.430452e-06	-5.025467e+00	...	13	32215698	...	4.035300e-07
TCGA-DD-A115-01A-11D-A12Z-10	299	294	5	209	1.672241e-02	coding only	1	28837332	...	78	192	279	2.704827e-06	6.658036e-06	9.674959e-06	-5.014351e+00	...	8	28781126	...	2.779599e-07
TCGA-DD-A116-01A-11D-A12Z-10	814	779	35	564	4.299754e-02	exome+100bp flanks	2	35947376	...	199	482	732	5.535870e-06	1.340849e-05	2.036310e-05	-4.691156e+00	...	49	32215698	...	1.520998e-06
TCGA-DD-A118-01A-11D-A12Z-10	563	550	13	392	2.309059e-02	coding only	1	28837332	...	145	362	520	5.028204e-06	1.255317e-05	1.803218e-05	-4.743952e+00	...	11	28781126	...	3.821949e-07
TCGA-DD-A119-01A-11D-A12Z-10	948	939	9	655	9.493671e-03	coding only	1	28837332	...	266	604	873	9.224154e-06	2.094507e-05	3.027326e-05	-4.518941e+00	...	2	28781126	...	6.948998e-08
TCGA-DD-A11A-01A-11D-A12Z-10	1143	1107	36	715	3.149606e-02	exome+100bp flanks	2	35947376	...	357	649	1038	9.931184e-06	1.805417e-05	2.887554e-05	-4.539470e+00	...	29	32215698	...	9.001823e-07
TCGA-DD-A11B-01A-11D-A16Z-10	284	275	9	198	3.169014e-02	exome+100bp flanks	2	35947376	...	76	183	264	2.114202e-06	5.090775e-06	7.344069e-06	-5.134063e+00	...	3	32215698	...	9.312230e-08
TCGA-DD-A11C-01A-11D-A12Z-10	1192	1177	15	806	1.258389e-02	coding only	1	28837332	...	351	757	1114	1.217172e-05	2.625069e-05	3.863048e-05	-4.413070e+00	...	4	28781126	...	1.389800e-07
TCGA-DD-A11D-01A-11D-A12Z-10	573	562	11	390	1.919721e-02	coding only	1	28837332	...	157	355	525	5.444332e-06	1.231043e-05	1.820557e-05	-4.739796e+00	...	12	28781126	...	4.169399e-07
TCGA-DD-A1E9-01A-21D-A152-10	208	203	5	135	2.403846e-02	coding only	1	28837332	...	61	121	183	2.115314e-06	4.195950e-06	6.345941e-06	-5.197504e+00	...	1	28781126	...	3.474499e-08
TCGA-DD-A1EA-01A-11D-A12Z-10	587	571	16	403	2.725724e-02	coding only	1	28837332	...	159	367	541	5.513686e-06	1.272656e-05	1.876040e-05	-4.726758e+00	...	15	28781126	...	5.211749e-07
TCGA-DD-A1EB-01A-11D-A12Z-10	714	683	31	450	4.341737e-02	exome+100bp flanks	2	35947376	...	217	384	635	6.036602e-06	1.068228e-05	1.766471e-05	-4.752893e+00	...	31	32215698	...	9.622638e-07
TCGA-DD-A1EC-01A-21D-A12Z-10	277	269	8	178	2.888087e-02	coding only	1	28837332	...	88	168	256	3.051600e-06	5.825782e-06	8.877382e-06	-5.051715e+00	...	0	28781126	...	0
TCGA-DD-A1ED-01A-11D-A152-10	6641	6562	79	3154	1.189580e-02	coding only	1	28837332	...	3224	2895	6144	1.117995e-04	1.003907e-04	2.130572e-04	-3.671504e+00	...	17	28781126	...	5.906649e-07
TCGA-DD-A1EF-01A-11D-A12Z-10	669	644	25	455	3.736921e-02	exome+100bp flanks	2	35947376	...	172	404	597	4.784772e-06	1.123865e-05	1.660761e-05	-4.779693e+00	...	19	32215698	...	5.897746e-07
TCGA-DD-A1EG-01A-11D-A20W-10	1263	1227	36	1136	2.850356e-02	coding only	1	28837332	...	81	227	1144	2.808859e-06	7.871741e-06	3.967080e-05	-4.401529e+00	...	829	28781126	...	2.880360e-05
TCGA-DD-A1EH-01A-11D-A12Z-10	460	441	19	318	4.130435e-02	exome+100bp flanks	2	35947376	...	116	271	411	3.226939e-06	7.538798e-06	1.143338e-05	-4.941825e+00	...	24	32215698	...	7.449784e-07
TCGA-DD-A1EI-01A-11D-A12Z-10	379	374	5	262	1.319261e-02	coding only	1	28837332	...	107	236	349	3.710468e-06	8.183836e-06	1.210237e-05	-4.917130e+00	...	5	28781126	...	1.737250e-07
TCGA-DD-A1EJ-01A-11D-A152-10	299	286	13	206	4.347826e-02	exome+100bp flanks	2	35947376	...	73	185	269	2.030746e-06	5.146412e-06	7.483161e-06	-5.125915e+00	...	10	32215698	...	3.104077e-07
TCGA-DD-A1EK-01A-11D-A20W-10	238	233	5	169	2.100840e-02	coding only	1	28837332	...	57	156	214	1.976604e-06	5.409654e-06	7.420936e-06	-5.129541e+00	...	1	28781126	...	3.474499e-08
TCGA-DD-A1EL-01A-11D-A152-10	1179	1153	26	795	2.205259e-02	coding only	1	28837332	...	337	733	1075	1.168624e-05	2.541844e-05	3.727807e-05	-4.428547e+00	...	2	28781126	...	6.948998e-08
TCGA-DD-A39V-01A-11D-A20W-10	270	265	5	177	1.851852e-02	coding only	1	28837332	...	83	163	252	2.878214e-06	5.652395e-06	8.738672e-06	-5.058555e+00	...	5	28781126	...	1.737250e-07
TCGA-DD-A39W-01A-11D-A20W-10	198	196	2	143	1.010101e-02	coding only	1	28837332	...	51	128	183	1.768541e-06	4.438691e-06	6.345941e-06	-5.197504e+00	...	4	28781126	...	1.389800e-07
TCGA-DD-A39X-01A-11D-A20W-10	480	479	1	339	2.083333e-03	coding only	1	28837332	...	128	320	454	4.438691e-06	1.109673e-05	1.574348e-05	-4.802899e+00	...	6	28781126	...	2.084700e-07
TCGA-DD-A39Y-01A-11D-A20W-10	1614	1578	36	1412	2.230483e-02	coding only	1	28837332	...	155	515	1482	5.374977e-06	1.785879e-05	5.139172e-05	-4.289107e+00	...	802	28781126	...	2.786548e-05
TCGA-DD-A39Z-01A-11D-A20W-10	499	497	2	352	4.008016e-03	coding only	1	28837332	...	133	326	462	4.612077e-06	1.130479e-05	1.602090e-05	-4.795313e+00	...	3	28781126	...	1.042350e-07
TCGA-DD-A3A0-01A-11D-A20W-10	1738	1699	39	1492	2.243959e-02	coding only	1	28837332	...	195	517	1598	6.762068e-06	1.792815e-05	5.541428e-05	-4.256378e+00	...	879	28781126	...	3.054085e-05
TCGA-DD-A3A1-01A-11D-A20W-10	329	322	7	244	2.127660e-02	coding only	1	28837332	...	75	182	306	2.600795e-06	6.311263e-06	1.061125e-05	-4.974234e+00	...	47	28781126	...	1.633015e-06
TCGA-DD-A3A2-01A-11D-A20W-10	241	233	8	169	3.319502e-02	exome+100bp flanks	2	35947376	...	61	152	219	1.696925e-06	4.228403e-06	6.092239e-06	-5.215223e+00	...	5	32215698	...	1.552038e-07
TCGA-DD-A3A3-01A-11D-A22F-10	177	172	5	123	2.824859e-02	coding only	1	28837332	...	47	105	160	1.629832e-06	3.641114e-06	5.548363e-06	-5.255835e+00	...	8	28781126	...	2.779599e-07
TCGA-DD-A3A4-01A-11D-A22F-10	181	180	1	132	5.524862e-03	coding only	1	28837332	...	46	120	171	1.595155e-06	4.161273e-06	5.929813e-06	-5.226959e+00	...	4	28781126	...	1.389800e-07
TCGA-DD-A3A5-01A-11D-A22F-10	191	183	8	134	4.188482e-02	exome+100bp flanks	2	35947376	...	45	120	171	1.251830e-06	3.338213e-06	4.756954e-06	-5.322671e+00	...	4	32215698	...	1.241631e-07
TCGA-DD-A3A6-01A-11D-A22F-10	138	135	3	97	2.173913e-02	coding only	1	28837332	...	32	90	125	1.109673e-06	3.120954e-06	4.334659e-06	-5.363045e+00	...	2	28781126	...	6.948998e-08
TCGA-DD-A3A7-01A-11D-A22F-10	272	260	12	188	4.411765e-02	exome+100bp flanks	2	35947376	...	68	173	248	1.891654e-06	4.812590e-06	6.898974e-06	-5.161216e+00	...	7	32215698	...	2.172854e-07
TCGA-DD-A3A8-01A-11D-A22F-10	291	277	14	194	4.810997e-02	exome+100bp flanks	2	35947376	...	78	182	264	2.169838e-06	5.062956e-06	7.344069e-06	-5.134063e+00	...	2	32215698	...	6.208154e-08
TCGA-DD-A3A9-01A-11D-A25V-10	535	514	21	374	3.925234e-02	exome+100bp flanks	2	35947376	...	127	350	487	3.532942e-06	9.736455e-06	1.354758e-05	-4.868138e+00	...	7	32215698	...	2.172854e-07
TCGA-DD-A4NA-01A-11D-A25V-10	62	61	1	42	1.612903e-02	coding only	1	28837332	...	19	34	55	6.588682e-07	1.179027e-06	1.907250e-06	-5.719592e+00	...	2	28781126	...	6.948998e-08
TCGA-DD-A4NB-01A-12D-A25V-10	61	57	4	40	6.557377e-02	coding only	1	28837332	...	15	28	49	5.201591e-07	9.709636e-07	1.699186e-06	-5.769759e+00	...	6	28781126	...	2.084700e-07
TCGA-DD-A4ND-01A-11D-A25V-10	92	88	4	61	4.347826e-02	coding only	1	28837332	...	26	54	84	9.016091e-07	1.872573e-06	2.912891e-06	-5.535676e+00	...	4	28781126	...	1.389800e-07
TCGA-DD-A4NE-01A-11D-A27I-10	105	102	3	73	2.857143e-02	coding only	1	28837332	...	27	60	96	9.362863e-07	2.080636e-06	3.329018e-06	-5.477684e+00	...	8	28781126	...	2.779599e-07
TCGA-DD-A4NF-01A-11D-A27I-10	190	185	5	136	2.631579e-02	coding only	1	28837332	...	44	127	174	1.525800e-06	4.404014e-06	6.033845e-06	-5.219406e+00	...	2	28781126	...	6.948998e-08
TCGA-DD-A4NG-01A-11D-A27I-10	128	122	6	86	4.687500e-02	exome+100bp flanks	2	35947376	...	35	74	118	9.736455e-07	2.058565e-06	3.282576e-06	-5.483785e+00	...	8	32215698	...	2.483261e-07
TCGA-DD-A4NH-01A-11D-A27I-10	93	90	3	64	3.225806e-02	coding only	1	28837332	...	26	54	84	9.016091e-07	1.872573e-06	2.912891e-06	-5.535676e+00	...	4	28781126	...	1.389800e-07
TCGA-DD-A4NI-01A-11D-A27I-10	258	243	15	183	5.813953e-02	exome+100bp flanks	2	35947376	...	57	168	234	1.585651e-06	4.673498e-06	6.509515e-06	-5.186451e+00	...	6	32215698	...	1.862446e-07
TCGA-DD-A4NJ-01A-11D-A27I-10	133	124	9	99	6.766917e-02	exome+100bp flanks	2	35947376	...	22	85	114	6.120057e-07	2.364568e-06	3.171302e-06	-5.498762e+00	...	6	32215698	...	1.862446e-07
TCGA-DD-A4NK-01A-11D-A28X-10	149	141	8	93	5.369128e-02	exome+100bp flanks	2	35947376	...	46	81	136	1.279648e-06	2.253294e-06	3.783308e-06	-5.422128e+00	...	6	32215698	...	1.862446e-07
TCGA-DD-A4NL-01A-11D-A28X-10	114	106	8	65	7.017544e-02	exome+100bp flanks	2	35947376	...	39	57	100	1.084919e-06	1.585651e-06	2.781844e-06	-5.555667e+00	...	2	32215698	...	6.208154e-08
TCGA-DD-A4NN-01A-11D-A28X-10	117	112	5	79	4.273504e-02	exome+100bp flanks	2	35947376	...	30	67	105	8.345533e-07	1.863836e-06	2.920936e-06	-5.534478e+00	...	8	32215698	...	2.483261e-07
TCGA-DD-A4NO-01A-11D-A28X-10	88	87	1	68	1.136364e-02	coding only	1	28837332	...	18	55	78	6.241909e-07	1.907250e-06	2.704827e-06	-5.567860e+00	...	5	28781126	...	1.737250e-07
TCGA-DD-A4NP-01A-11D-A28X-10	88	84	4	51	4.545455e-02	coding only	1	28837332	...	28	44	74	9.709636e-07	1.525800e-06	2.566118e-06	-5.590723e+00	...	2	28781126	...	6.948998e-08
TCGA-DD-A4NQ-01A-21D-A28X-10	165	159	6	105	3.636364e-02	exome+100bp flanks	2	35947376	...	50	92	148	1.390922e-06	2.559297e-06	4.117129e-06	-5.385405e+00	...	6	32215698	...	1.862446e-07
TCGA-DD-A4NR-01A-11D-A30V-10	96	91	5	67	5.208333e-02	exome+100bp flanks	2	35947376	...	22	59	85	6.120057e-07	1.641288e-06	2.364568e-06	-5.626248e+00	...	3	32215698	...	9.312230e-08
TCGA-DD-A4NS-01A-11D-A30V-10	112	108	4	83	3.571429e-02	coding only	1	28837332	...	21	75	100	7.282227e-07	2.600795e-06	3.467727e-06	-5.459955e+00	...	3	28781126	...	1.042350e-07
TCGA-DD-A4NV-01A-11D-A30V-10	232	226	6	175	2.586207e-02	coding only	1	28837332	...	47	159	214	1.629832e-06	5.513686e-06	7.420936e-06	-5.129541e+00	...	8	28781126	...	2.779599e-07
TCGA-DD-A73A-01A-12D-A32G-10	149	144	5	104	3.355705e-02	exome+100bp flanks	2	35947376	...	40	88	136	1.112738e-06	2.448023e-06	3.783308e-06	-5.422128e+00	...	8	32215698	...	2.483261e-07
TCGA-DD-A73B-01A-12D-A32G-10	112	106	6	79	5.357143e-02	exome+100bp flanks	2	35947376	...	24	79	105	6.676426e-07	2.197657e-06	2.920936e-06	-5.534478e+00	...	0	32215698	...	0
TCGA-DD-A73C-01A-12D-A33K-10	122	122	0	89	0	coding only	1	28837332	...	32	75	116	1.109673e-06	2.600795e-06	4.022564e-06	-5.395497e+00	...	9	28781126	...	3.127049e-07
TCGA-DD-A73D-01A-12D-A32G-10	107	102	5	81	4.672897e-02	exome+100bp flanks	2	35947376	...	21	68	96	5.841873e-07	1.891654e-06	2.670570e-06	-5.573396e+00	...	6	32215698	...	1.862446e-07
TCGA-DD-A73E-01A-12D-A32G-10	259	247	12	188	4.633205e-02	exome+100bp flanks	2	35947376	...	58	175	242	1.613470e-06	4.868227e-06	6.732063e-06	-5.171852e+00	...	6	32215698	...	1.862446e-07
TCGA-DD-A73F-01A-11D-A32G-10	210	203	7	142	3.333333e-02	exome+100bp flanks	2	35947376	...	58	134	195	1.613470e-06	3.727671e-06	5.424596e-06	-5.265633e+00	...	1	32215698	...	3.104077e-08
TCGA-DD-A73G-01A-22D-A32G-10	164	163	1	115	6.097561e-03	coding only	1	28837332	...	44	102	152	1.525800e-06	3.537082e-06	5.270945e-06	-5.278111e+00	...	6	28781126	...	2.084700e-07
TCGA-ED-A459-01A-11D-A25V-10	332	325	7	251	2.108434e-02	coding only	1	28837332	...	71	233	314	2.462086e-06	8.079804e-06	1.088866e-05	-4.963025e+00	...	7	28781126	...	2.432149e-07
TCGA-ED-A4XI-01A-11D-A25V-10	255	249	6	192	2.352941e-02	coding only	1	28837332	...	55	171	234	1.907250e-06	5.929813e-06	8.114482e-06	-5.090739e+00	...	8	28781126	...	2.779599e-07
TCGA-ED-A5KG-01A-11D-A27I-10	79	75	4	43	5.063291e-02	coding only	1	28837332	...	28	39	68	9.709636e-07	1.352414e-06	2.358054e-06	-5.627446e+00	...	1	28781126	...	3.474499e-08
TCGA-ED-A627-01A-12D-A30V-10	53	50	3	34	5.660377e-02	coding only	1	28837332	...	13	30	44	4.508045e-07	1.040318e-06	1.525800e-06	-5.816502e+00	...	1	28781126	...	3.474499e-08
TCGA-ED-A66X-01A-11D-A30V-10	103	98	5	74	4.854369e-02	exome+100bp flanks	2	35947376	...	23	65	90	6.398242e-07	1.808199e-06	2.503660e-06	-5.601425e+00	...	1	32215698	...	3.104077e-08
TCGA-ED-A66Y-01A-11D-A30V-10	135	132	3	104	2.222222e-02	coding only	1	28837332	...	25	97	126	8.669318e-07	3.363695e-06	4.369336e-06	-5.359585e+00	...	3	28781126	...	1.042350e-07
TCGA-ED-A7PX-01A-51D-A34Z-10	58	55	3	46	5.172414e-02	coding only	1	28837332	...	7	38	47	2.427409e-07	1.317736e-06	1.629832e-06	-5.787857e+00	...	2	28781126	...	6.948998e-08
TCGA-ED-A7PY-01A-11D-A33Q-10	63	58	5	45	7.936508e-02	exome+100bp flanks	2	35947376	...	13	44	59	3.616397e-07	1.224011e-06	1.641288e-06	-5.784815e+00	...	0	32215698	...	0
TCGA-ED-A7PZ-01A-11D-A33Q-10	328	318	10	253	3.048780e-02	exome+100bp flanks	2	35947376	...	64	236	312	1.780380e-06	6.565152e-06	8.679354e-06	-5.061513e+00	...	10	32215698	...	3.104077e-07
TCGA-ED-A7XO-01A-11D-A34Z-10	92	89	3	69	3.260870e-02	coding only	1	28837332	...	17	63	81	5.895136e-07	2.184668e-06	2.808859e-06	-5.551470e+00	...	1	28781126	...	3.474499e-08
TCGA-ED-A7XP-01A-11D-A34Z-10	107	105	2	77	1.869159e-02	coding only	1	28837332	...	26	68	99	9.016091e-07	2.358054e-06	3.433050e-06	-5.464320e+00	...	5	28781126	...	1.737250e-07
TCGA-ED-A82E-01A-11D-A34Z-10	60	59	1	43	1.666667e-02	coding only	1	28837332	...	13	39	55	4.508045e-07	1.352414e-06	1.907250e-06	-5.719592e+00	...	3	28781126	...	1.042350e-07
TCGA-EP-A12J-01A-11D-A12Z-10	455	428	27	288	5.934066e-02	exome+100bp flanks	2	35947376	...	131	224	397	3.644216e-06	6.231331e-06	1.104392e-05	-4.956877e+00	...	41	32215698	...	1.272671e-06
TCGA-EP-A26S-01A-11D-A16V-10	794	777	17	528	2.141058e-02	coding only	1	28837332	...	236	493	735	8.183836e-06	1.709590e-05	2.548779e-05	-4.593668e+00	...	6	28781126	...	2.084700e-07
TCGA-EP-A2KA-01A-11D-A183-10	1432	1410	22	975	1.536313e-02	coding only	1	28837332	...	417	904	1332	1.446042e-05	3.134825e-05	4.619013e-05	-4.335451e+00	...	5	28781126	...	1.737250e-07
TCGA-EP-A2KB-01A-11D-A183-10	1060	1053	7	722	6.603774e-03	coding only	1	28837332	...	308	672	983	1.068060e-05	2.330313e-05	3.408776e-05	-4.467402e+00	...	2	28781126	...	6.948998e-08
TCGA-EP-A2KC-01A-11D-A20W-10	196	190	6	125	3.061224e-02	exome+100bp flanks	2	35947376	...	60	113	177	1.669107e-06	3.143484e-06	4.923864e-06	-5.307694e+00	...	4	32215698	...	1.241631e-07
TCGA-EP-A3JL-01A-11D-A20W-10	244	242	2	176	8.196721e-03	coding only	1	28837332	...	63	161	229	2.184668e-06	5.583041e-06	7.941095e-06	-5.100120e+00	...	5	28781126	...	1.737250e-07
TCGA-EP-A3RK-01A-11D-A22F-10	155	148	7	110	4.516129e-02	exome+100bp flanks	2	35947376	...	35	105	143	9.736455e-07	2.920936e-06	3.978037e-06	-5.400331e+00	...	1	32215698	...	3.104077e-08
TCGA-ES-A2HS-01A-11D-A183-10	1141	1131	10	795	8.764242e-03	coding only	1	28837332	...	309	749	1064	1.071528e-05	2.597328e-05	3.689662e-05	-4.433013e+00	...	5	28781126	...	1.737250e-07
TCGA-ES-A2HT-01A-12D-A183-10	1163	1153	10	815	8.598452e-03	coding only	1	28837332	...	320	766	1089	1.109673e-05	2.656279e-05	3.776355e-05	-4.422927e+00	...	2	28781126	...	6.948998e-08
TCGA-FV-A23B-01A-11D-A16V-10	2023	1995	28	1426	1.384083e-02	coding only	1	28837332	...	534	1336	1876	1.851766e-05	4.632884e-05	6.505456e-05	-4.186722e+00	...	6	28781126	...	2.084700e-07
TCGA-FV-A2QQ-01A-11D-A22F-10	283	269	14	203	4.946996e-02	exome+100bp flanks	2	35947376	...	65	183	259	1.808199e-06	5.090775e-06	7.204977e-06	-5.142367e+00	...	9	32215698	...	2.793669e-07
TCGA-FV-A2QR-01A-11D-A20W-10	573	563	10	411	1.745201e-02	coding only	1	28837332	...	140	375	527	4.854818e-06	1.300398e-05	1.827492e-05	-4.738144e+00	...	9	28781126	...	3.127049e-07
TCGA-FV-A3I0-01A-11D-A22F-10	205	199	6	146	2.926829e-02	coding only	1	28837332	...	51	135	191	1.768541e-06	4.681432e-06	6.623359e-06	-5.178922e+00	...	5	28781126	...	1.737250e-07
TCGA-FV-A3I1-01A-11D-A22F-10	125	119	6	85	4.800000e-02	exome+100bp flanks	2	35947376	...	31	75	111	8.623717e-07	2.086383e-06	3.087847e-06	-5.510344e+00	...	4	32215698	...	1.241631e-07
TCGA-FV-A3R2-01A-11D-A22F-10	191	184	7	127	3.664921e-02	exome+100bp flanks	2	35947376	...	55	119	180	1.530014e-06	3.310395e-06	5.007320e-06	-5.300395e+00	...	4	32215698	...	1.241631e-07
TCGA-FV-A3R3-01A-11D-A22F-10	203	198	5	146	2.463054e-02	coding only	1	28837332	...	47	134	184	1.629832e-06	4.646754e-06	6.380618e-06	-5.195137e+00	...	3	28781126	...	1.042350e-07
TCGA-FV-A495-01A-11D-A25V-10	180	169	11	124	6.111111e-02	exome+100bp flanks	2	35947376	...	43	107	159	1.196193e-06	2.976573e-06	4.423132e-06	-5.354270e+00	...	7	32215698	...	2.172854e-07
TCGA-FV-A496-01A-11D-A25V-10	195	192	3	147	1.538462e-02	coding only	1	28837332	...	45	128	185	1.560477e-06	4.438691e-06	6.415295e-06	-5.192783e+00	...	12	28781126	...	4.169399e-07
TCGA-FV-A4ZP-01A-12D-A25V-10	167	165	2	120	1.197605e-02	coding only	1	28837332	...	41	108	153	1.421768e-06	3.745145e-06	5.305623e-06	-5.275264e+00	...	4	28781126	...	1.389800e-07
TCGA-FV-A4ZQ-01A-11D-A25V-10	132	128	4	92	3.030303e-02	coding only	1	28837332	...	35	85	124	1.213705e-06	2.947568e-06	4.299982e-06	-5.366533e+00	...	4	28781126	...	1.389800e-07
TCGA-G3-A25S-01A-11D-A16V-10	1959	1933	26	1352	1.327208e-02	coding only	1	28837332	...	556	1274	1842	1.928056e-05	4.417884e-05	6.387553e-05	-4.194665e+00	...	8	28781126	...	2.779599e-07
TCGA-G3-A25T-01A-11D-A16V-10	1634	1618	16	1151	9.791922e-03	coding only	1	28837332	...	436	1071	1513	1.511929e-05	3.713936e-05	5.246671e-05	-4.280116e+00	...	5	28781126	...	1.737250e-07
TCGA-G3-A25U-01A-11D-A16V-10	1997	1975	22	1422	1.101652e-02	coding only	1	28837332	...	514	1334	1854	1.782412e-05	4.625948e-05	6.429166e-05	-4.191845e+00	...	4	28781126	...	1.389800e-07
TCGA-G3-A25V-01A-11D-A16V-10	1140	1124	16	782	1.403509e-02	coding only	1	28837332	...	325	743	1079	1.127011e-05	2.576521e-05	3.741678e-05	-4.426934e+00	...	7	28781126	...	2.432149e-07
TCGA-G3-A25W-01A-11D-A16V-10	1495	1474	21	1036	1.404682e-02	coding only	1	28837332	...	407	972	1385	1.411365e-05	3.370631e-05	4.802802e-05	-4.318505e+00	...	4	28781126	...	1.389800e-07
TCGA-G3-A25Y-01A-11D-A16V-10	1019	995	24	688	2.355250e-02	coding only	1	28837332	...	289	643	942	1.002173e-05	2.229749e-05	3.266599e-05	-4.485904e+00	...	3	28781126	...	1.042350e-07
TCGA-G3-A25Z-01A-11D-A16V-10	746	730	16	487	2.144772e-02	coding only	1	28837332	...	226	440	669	7.837063e-06	1.525800e-05	2.319909e-05	-4.634529e+00	...	3	28781126	...	1.042350e-07
TCGA-G3-A3CG-01A-11D-A20W-10	264	263	1	182	3.787879e-03	coding only	1	28837332	...	72	166	244	2.496764e-06	5.756427e-06	8.461254e-06	-5.072565e+00	...	6	28781126	...	2.084700e-07
TCGA-G3-A3CH-01A-11D-A22F-10	176	169	7	118	3.977273e-02	exome+100bp flanks	2	35947376	...	44	105	155	1.224011e-06	2.920936e-06	4.311859e-06	-5.365335e+00	...	6	32215698	...	1.862446e-07
TCGA-G3-A3CI-01A-11D-A20W-10	153	151	2	110	1.307190e-02	coding only	1	28837332	...	38	107	147	1.317736e-06	3.710468e-06	5.097559e-06	-5.292638e+00	...	0	28781126	...	0
TCGA-G3-A3CJ-01A-11D-A20W-10	1660	1610	50	1511	3.012048e-02	exome+100bp flanks	2	35947376	...	89	291	1517	2.475841e-06	8.095167e-06	4.220058e-05	-4.374682e+00	...	1124	32215698	...	3.488982e-05
TCGA-G3-A3CK-01A-11D-A20W-10	439	431	8	314	1.822323e-02	coding only	1	28837332	...	109	270	404	3.779823e-06	9.362863e-06	1.400962e-05	-4.853574e+00	...	24	28781126	...	8.338798e-07
TCGA-G3-A5SI-01A-31D-A27I-10	85	82	3	53	3.529412e-02	coding only	1	28837332	...	28	43	77	9.709636e-07	1.491123e-06	2.670150e-06	-5.573464e+00	...	6	28781126	...	2.084700e-07
TCGA-G3-A5SJ-01A-11D-A27I-10	177	173	4	136	2.259887e-02	coding only	1	28837332	...	36	121	166	1.248382e-06	4.195950e-06	5.756427e-06	-5.239847e+00	...	9	28781126	...	3.127049e-07
TCGA-G3-A5SK-01A-11D-A27I-10	161	152	9	112	5.590062e-02	exome+100bp flanks	2	35947376	...	37	102	143	1.029282e-06	2.837481e-06	3.978037e-06	-5.400331e+00	...	4	32215698	...	1.241631e-07
TCGA-G3-A5SL-01A-11D-A27I-10	194	187	7	150	3.608247e-02	exome+100bp flanks	2	35947376	...	37	130	176	1.029282e-06	3.616397e-06	4.896046e-06	-5.310155e+00	...	7	32215698	...	2.172854e-07
TCGA-G3-A5SM-01A-12D-A28X-10	190	180	10	123	5.263158e-02	exome+100bp flanks	2	35947376	...	54	112	171	1.502196e-06	3.115666e-06	4.756954e-06	-5.322671e+00	...	4	32215698	...	1.241631e-07
TCGA-G3-A6UC-01A-21D-A33K-10	182	171	11	126	6.043956e-02	exome+100bp flanks	2	35947376	...	44	111	163	1.224011e-06	3.087847e-06	4.534406e-06	-5.343480e+00	...	7	32215698	...	2.172854e-07
TCGA-G3-A7M5-01A-11D-A33Q-10	262	251	11	188	4.198473e-02	exome+100bp flanks	2	35947376	...	60	164	244	1.669107e-06	4.562225e-06	6.787700e-06	-5.168277e+00	...	16	32215698	...	4.966523e-07
TCGA-G3-A7M6-01A-11D-A33Q-10	153	149	4	117	2.614379e-02	coding only	1	28837332	...	29	108	143	1.005641e-06	3.745145e-06	4.958850e-06	-5.304619e+00	...	6	28781126	...	2.084700e-07
TCGA-G3-A7M7-01A-12D-A34Z-10	162	156	6	119	3.703704e-02	exome+100bp flanks	2	35947376	...	33	107	142	9.180086e-07	2.976573e-06	3.950219e-06	-5.403379e+00	...	1	32215698	...	3.104077e-08
TCGA-G3-A7M8-01A-11D-A33Q-10	64	62	2	49	3.125000e-02	coding only	1	28837332	...	13	43	57	4.508045e-07	1.491123e-06	1.976604e-06	-5.704080e+00	...	1	28781126	...	3.474499e-08
TCGA-G3-A7M9-01A-23D-A34Z-10	234	231	3	173	1.282051e-02	coding only	1	28837332	...	53	154	218	1.837895e-06	5.340300e-06	7.559645e-06	-5.121499e+00	...	11	28781126	...	3.821949e-07
TCGA-GJ-A6C0-01A-12D-A30V-10	130	126	4	96	3.076923e-02	coding only	1	28837332	...	25	91	116	8.669318e-07	3.155632e-06	4.022564e-06	-5.395497e+00	...	0	28781126	...	0
TCGA-HP-A5MZ-01A-21D-A27I-10	96	93	3	62	3.125000e-02	coding only	1	28837332	...	30	53	90	1.040318e-06	1.837895e-06	3.120954e-06	-5.505713e+00	...	6	28781126	...	2.084700e-07
TCGA-HP-A5N0-01A-11D-A28X-10	211	205	6	157	2.843602e-02	coding only	1	28837332	...	47	140	198	1.629832e-06	4.854818e-06	6.866100e-06	-5.163290e+00	...	10	28781126	...	3.474499e-07
TCGA-K7-A5RF-01A-11D-A28X-10	130	126	4	79	3.076923e-02	coding only	1	28837332	...	41	75	118	1.421768e-06	2.600795e-06	4.091918e-06	-5.388073e+00	...	2	28781126	...	6.948998e-08
TCGA-K7-A5RG-01A-11D-A28X-10	213	202	11	156	5.164319e-02	exome+100bp flanks	2	35947376	...	44	140	188	1.224011e-06	3.894582e-06	5.229867e-06	-5.281509e+00	...	3	32215698	...	9.312230e-08
TCGA-K7-A6G5-01A-11D-A30V-10	143	136	7	87	4.895105e-02	exome+100bp flanks	2	35947376	...	46	76	128	1.279648e-06	2.114202e-06	3.560761e-06	-5.448457e+00	...	5	32215698	...	1.552038e-07
TCGA-KR-A7K0-01A-12D-A33Q-10	133	131	2	95	1.503759e-02	coding only	1	28837332	...	35	76	124	1.213705e-06	2.635473e-06	4.299982e-06	-5.366533e+00	...	12	28781126	...	4.169399e-07
TCGA-KR-A7K2-01A-12D-A33Q-10	95	92	3	56	3.157895e-02	coding only	1	28837332	...	36	46	88	1.248382e-06	1.595155e-06	3.051600e-06	-5.515472e+00	...	5	28781126	...	1.737250e-07
TCGA-KR-A7K7-01A-11D-A33K-10	101	97	4	73	3.960396e-02	coding only	1	28837332	...	22	66	96	7.629000e-07	2.288700e-06	3.329018e-06	-5.477684e+00	...	6	28781126	...	2.084700e-07
TCGA-KR-A7K8-01A-11D-A33K-10	92	87	5	64	5.434783e-02	exome+100bp flanks	2	35947376	...	23	59	85	6.398242e-07	1.641288e-06	2.364568e-06	-5.626248e+00	...	3	32215698	...	9.312230e-08
TCGA-LG-A6GG-01A-11D-A30V-10	280	270	10	203	3.571429e-02	exome+100bp flanks	2	35947376	...	65	186	256	1.808199e-06	5.174230e-06	7.121521e-06	-5.147427e+00	...	4	32215698	...	1.241631e-07
TCGA-MI-A75C-01A-11D-A32G-10	175	167	8	129	4.571429e-02	exome+100bp flanks	2	35947376	...	35	114	158	9.736455e-07	3.171302e-06	4.395314e-06	-5.357010e+00	...	9	32215698	...	2.793669e-07
TCGA-MI-A75E-01A-11D-A32G-10	175	172	3	127	1.714286e-02	coding only	1	28837332	...	41	106	155	1.421768e-06	3.675791e-06	5.374977e-06	-5.269623e+00	...	8	28781126	...	2.779599e-07
TCGA-MI-A75G-01A-11D-A32G-10	324	319	5	256	1.543210e-02	coding only	1	28837332	...	58	218	295	2.011282e-06	7.559645e-06	1.022980e-05	-4.990133e+00	...	19	28781126	...	6.601549e-07
TCGA-MI-A75H-01A-11D-A32G-10	190	180	10	131	5.263158e-02	exome+100bp flanks	2	35947376	...	47	117	175	1.307467e-06	3.254758e-06	4.868227e-06	-5.312629e+00	...	8	32215698	...	2.483261e-07
TCGA-MI-A75I-01A-11D-A32G-10	254	243	11	183	4.330709e-02	exome+100bp flanks	2	35947376	...	58	166	233	1.613470e-06	4.617861e-06	6.481697e-06	-5.188311e+00	...	9	32215698	...	2.793669e-07
TCGA-MR-A520-01A-11D-A25V-10	65	62	3	39	4.615385e-02	coding only	1	28837332	...	22	33	57	7.629000e-07	1.144350e-06	1.976604e-06	-5.704080e+00	...	2	28781126	...	6.948998e-08
TCGA-NI-A4U2-01A-11D-A28X-10	201	196	5	148	2.487562e-02	coding only	1	28837332	...	45	132	188	1.560477e-06	4.577400e-06	6.519327e-06	-5.185797e+00	...	10	28781126	...	3.474499e-07
TCGA-O8-A75V-01A-11D-A32G-10	123	116	7	75	5.691057e-02	exome+100bp flanks	2	35947376	...	39	64	109	1.084919e-06	1.780380e-06	3.032210e-06	-5.518241e+00	...	3	32215698	...	9.312230e-08
TCGA-PD-A5DF-01A-11D-A27I-10	79	77	2	61	2.531646e-02	coding only	1	28837332	...	15	51	72	5.201591e-07	1.768541e-06	2.496764e-06	-5.602623e+00	...	6	28781126	...	2.084700e-07
TCGA-QA-A7B7-01A-11D-A32G-10	148	141	7	98	4.729730e-02	exome+100bp flanks	2	35947376	...	43	90	140	1.196193e-06	2.503660e-06	3.894582e-06	-5.409539e+00	...	5	32215698	...	1.552038e-07
TCGA-RC-A6M3-01A-11D-A32G-10	134	129	5	99	3.731343e-02	exome+100bp flanks	2	35947376	...	26	86	116	7.232795e-07	2.392386e-06	3.226939e-06	-5.491209e+00	...	4	32215698	...	1.241631e-07
TCGA-RC-A6M4-01A-11D-A32G-10	247	234	13	169	5.263158e-02	exome+100bp flanks	2	35947376	...	59	160	222	1.641288e-06	4.450951e-06	6.175694e-06	-5.209314e+00	...	1	32215698	...	3.104077e-08
TCGA-RC-A6M5-01A-11D-A32G-10	62	58	4	46	6.451613e-02	coding only	1	28837332	...	11	40	55	3.814500e-07	1.387091e-06	1.907250e-06	-5.719592e+00	...	3	28781126	...	1.042350e-07
TCGA-RC-A6M6-01A-11D-A32G-10	253	243	10	196	3.952569e-02	exome+100bp flanks	2	35947376	...	44	164	232	1.224011e-06	4.562225e-06	6.453879e-06	-5.190179e+00	...	22	32215698	...	6.828969e-07
TCGA-RC-A7S9-01A-11D-A33Q-10	88	86	2	66	2.272727e-02	coding only	1	28837332	...	20	56	83	6.935454e-07	1.941927e-06	2.878214e-06	-5.540877e+00	...	7	28781126	...	2.432149e-07
TCGA-RC-A7SB-01A-21D-A34Z-10	116	115	1	84	8.620690e-03	coding only	1	28837332	...	30	70	107	1.040318e-06	2.427409e-06	3.710468e-06	-5.430571e+00	...	7	28781126	...	2.432149e-07
TCGA-RC-A7SF-01A-11D-A34Z-10	130	128	2	94	1.538462e-02	coding only	1	28837332	...	32	85	120	1.109673e-06	2.947568e-06	4.161273e-06	-5.380774e+00	...	3	28781126	...	1.042350e-07
TCGA-RC-A7SK-01A-11D-A34Z-10	213	207	6	157	2.816901e-02	coding only	1	28837332	...	47	138	193	1.629832e-06	4.785464e-06	6.692713e-06	-5.174398e+00	...	7	28781126	...	2.432149e-07
TCGA-RG-A7D4-01A-12D-A33Q-10	147	138	9	96	6.122449e-02	exome+100bp flanks	2	35947376	...	39	87	130	1.084919e-06	2.420204e-06	3.616397e-06	-5.441724e+00	...	4	32215698	...	1.241631e-07
TCGA-T1-A6J8-01A-11D-A32G-10	142	133	9	96	6.338028e-02	exome+100bp flanks	2	35947376	...	37	79	131	1.029282e-06	2.197657e-06	3.644216e-06	-5.438396e+00	...	12	32215698	...	3.724892e-07
TCGA-UB-A7MA-01A-11D-A33Q-10	177	168	9	117	5.084746e-02	exome+100bp flanks	2	35947376	...	48	100	157	1.335285e-06	2.781844e-06	4.367495e-06	-5.359768e+00	...	8	32215698	...	2.483261e-07
TCGA-UB-A7MB-01A-11D-A33Q-10	1865	1812	53	1354	2.841823e-02	coding only	1	28837332	...	429	1257	1708	1.487655e-05	4.358933e-05	5.922878e-05	-4.227467e+00	...	13	28781126	...	4.516849e-07
TCGA-UB-A7MC-01A-11D-A33Q-10	116	113	3	87	2.586207e-02	coding only	1	28837332	...	23	76	105	7.975773e-07	2.635473e-06	3.641114e-06	-5.438766e+00	...	6	28781126	...	2.084700e-07
TCGA-UB-A7MD-01A-12D-A34Z-10	151	144	7	107	4.635762e-02	exome+100bp flanks	2	35947376	...	36	92	134	1.001464e-06	2.559297e-06	3.727671e-06	-5.428562e+00	...	5	32215698	...	1.552038e-07
TCGA-UB-A7ME-01A-11D-A33K-10	146	141	5	99	3.424658e-02	exome+100bp flanks	2	35947376	...	40	87	132	1.112738e-06	2.420204e-06	3.672034e-06	-5.435093e+00	...	5	32215698	...	1.552038e-07
TCGA-UB-A7MF-01A-11D-A33K-10	165	163	2	121	1.212121e-02	coding only	1	28837332	...	41	109	157	1.421768e-06	3.779823e-06	5.444332e-06	-5.264055e+00	...	7	28781126	...	2.432149e-07
