[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"         "-nVNozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"        "-oTLUAD-TP"
[1] "opt"       "-OPMUTSIG"
[1] "tl" ""  
[1] "dx" ""  
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/LUAD-TP/10667984/LUAD-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/LUAD-TP/10013791/transformed.cor.cli.txt"

nPatients in clinical file=511, in cluster file=493, common to both=493
[1]  82 493
[1] "AMP PEAK  1(1P34.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE 
                          132                           361 
  AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE 
                          132                           361 
[1] "AMP PEAK  2(1P22.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE 
                          133                           360 
  AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE 
                          133                           360 
[1] "AMP PEAK  3(1Q21.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE 
                          359                           134 
  AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE 
                          359                           134 
[1] "AMP PEAK  4(3Q26.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE 
                          163                           330 
  AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE 
                          163                           330 
[1] "AMP PEAK  5(4Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE 
                         93                         400 
  AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE 
                         93                         400 
[1] "AMP PEAK  6(5P15.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                           319                            174 
  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                           319                            174 
[1] "AMP PEAK  7(5P13.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE 
                          291                           202 
  AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE 
                          291                           202 
[1] "AMP PEAK  8(5Q35.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE 
                          123                           370 
  AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE 
                          123                           370 
[1] "AMP PEAK  9(6P21.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE 
                          186                           307 
  AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE 
                          186                           307 
[1] "AMP PEAK 10(7P21.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 10(7P21.1) MUTATED AMP PEAK 10(7P21.1) WILD-TYPE 
                          270                           223 
  AMP PEAK 10(7P21.1) MUTATED AMP PEAK 10(7P21.1) WILD-TYPE 
                          270                           223 
[1] "AMP PEAK 11(7P11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE 
                          260                           233 
  AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE 
                          260                           233 
[1] "AMP PEAK 12(7Q31.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 12(7Q31.2) MUTATED AMP PEAK 12(7Q31.2) WILD-TYPE 
                          206                           287 
  AMP PEAK 12(7Q31.2) MUTATED AMP PEAK 12(7Q31.2) WILD-TYPE 
                          206                           287 
[1] "AMP PEAK 13(8P11.23) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE 
                           134                            359 
  AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE 
                           134                            359 
[1] "AMP PEAK 14(8P11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE 
                           170                            323 
  AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE 
                           170                            323 
[1] "AMP PEAK 15(8Q11.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE 
                          224                           269 
  AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE 
                          224                           269 
[1] "AMP PEAK 16(8Q24.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE 
                           310                            183 
  AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE 
                           310                            183 
[1] "AMP PEAK 17(10P15.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE 
                           136                            357 
  AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE 
                           136                            357 
[1] "AMP PEAK 18(11Q13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE 
                           165                            328 
  AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE 
                           165                            328 
[1] "AMP PEAK 19(12P12.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE 
                           174                            319 
  AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE 
                           174                            319 
[1] "AMP PEAK 20(12Q14.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE 
                           161                            332 
  AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE 
                           161                            332 
[1] "AMP PEAK 21(12Q15) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE 
                         162                          331 
  AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE 
                         162                          331 
[1] "AMP PEAK 22(13Q33.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE 
                            77                            416 
  AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE 
                            77                            416 
[1] "AMP PEAK 23(14Q13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE 
                           222                            271 
  AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE 
                           222                            271 
[1] "AMP PEAK 24(16P11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 24(16P11.2) MUTATED AMP PEAK 24(16P11.2) WILD-TYPE 
                           159                            334 
  AMP PEAK 24(16P11.2) MUTATED AMP PEAK 24(16P11.2) WILD-TYPE 
                           159                            334 
[1] "AMP PEAK 25(17Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE 
                         219                          274 
  AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE 
                         219                          274 
[1] "AMP PEAK 26(17Q23.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 26(17Q23.1) MUTATED AMP PEAK 26(17Q23.1) WILD-TYPE 
                           241                            252 
  AMP PEAK 26(17Q23.1) MUTATED AMP PEAK 26(17Q23.1) WILD-TYPE 
                           241                            252 
[1] "AMP PEAK 27(18Q11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE 
                            99                            394 
  AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE 
                            99                            394 
[1] "AMP PEAK 28(19Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE 
                         133                          360 
  AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE 
                         133                          360 
[1] "AMP PEAK 29(20P11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 29(20P11.21) MUTATED AMP PEAK 29(20P11.21) WILD-TYPE 
                            188                             305 
  AMP PEAK 29(20P11.21) MUTATED AMP PEAK 29(20P11.21) WILD-TYPE 
                            188                             305 
[1] "AMP PEAK 30(20Q13.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE 
                            237                             256 
  AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE 
                            237                             256 
[1] "AMP PEAK 31(22Q11.22) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE 
                             87                             406 
  AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE 
                             87                             406 
[1] "AMP PEAK 32(XQ28) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE 
                        149                         344 
  AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE 
                        149                         344 
[1] "DEL PEAK  1(1P36.13) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE 
                           116                            377 
  DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE 
                           116                            377 
[1] "DEL PEAK  2(1P13.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE 
                          144                           349 
  DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE 
                          144                           349 
[1] "DEL PEAK  3(2Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE 
                           44                           449 
  DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE 
                           44                           449 
[1] "DEL PEAK  4(2Q37.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE 
                           63                           430 
  DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE 
                           63                           430 
[1] "DEL PEAK  5(3P26.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE 
                          223                           270 
  DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE 
                          223                           270 
[1] "DEL PEAK  6(3P21.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE 
                           237                            256 
  DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE 
                           237                            256 
[1] "DEL PEAK  7(3Q11.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE 
                          136                           357 
  DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE 
                          136                           357 
[1] "DEL PEAK  8(3Q29) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE 
                        133                         360 
  DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE 
                        133                         360 
[1] "DEL PEAK  9(4P16.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE 
                          126                           367 
  DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE 
                          126                           367 
[1] "DEL PEAK 10(4Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE 
                          154                           339 
  DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE 
                          154                           339 
[1] "DEL PEAK 11(4Q35.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE 
                          182                           311 
  DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE 
                          182                           311 
[1] "DEL PEAK 12(5Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE 
                          172                           321 
  DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE 
                          172                           321 
[1] "DEL PEAK 13(5Q31.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 13(5Q31.1) MUTATED DEL PEAK 13(5Q31.1) WILD-TYPE 
                          199                           294 
  DEL PEAK 13(5Q31.1) MUTATED DEL PEAK 13(5Q31.1) WILD-TYPE 
                          199                           294 
[1] "DEL PEAK 14(6Q12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE 
                        174                         319 
  DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE 
                        174                         319 
[1] "DEL PEAK 15(6Q22.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE 
                           246                            247 
  DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE 
                           246                            247 
[1] "DEL PEAK 16(6Q26) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE 
                        249                         244 
  DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE 
                        249                         244 
[1] "DEL PEAK 17(8P23.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE 
                          241                           252 
  DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE 
                          241                           252 
[1] "DEL PEAK 18(8P12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 18(8P12) MUTATED DEL PEAK 18(8P12) WILD-TYPE 
                        215                         278 
  DEL PEAK 18(8P12) MUTATED DEL PEAK 18(8P12) WILD-TYPE 
                        215                         278 
[1] "DEL PEAK 19(8P11.21) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 19(8P11.21) MUTATED DEL PEAK 19(8P11.21) WILD-TYPE 
                           113                            380 
  DEL PEAK 19(8P11.21) MUTATED DEL PEAK 19(8P11.21) WILD-TYPE 
                           113                            380 
[1] "DEL PEAK 20(8Q11.21) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 20(8Q11.21) MUTATED DEL PEAK 20(8Q11.21) WILD-TYPE 
                            63                            430 
  DEL PEAK 20(8Q11.21) MUTATED DEL PEAK 20(8Q11.21) WILD-TYPE 
                            63                            430 
[1] "DEL PEAK 21(9P23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE 
                        271                         222 
  DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE 
                        271                         222 
[1] "DEL PEAK 22(9P21.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE 
                          278                           215 
  DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE 
                          278                           215 
[1] "DEL PEAK 23(9Q21.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE 
                           246                            247 
  DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE 
                           246                            247 
[1] "DEL PEAK 24(10P15.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE 
                           122                            371 
  DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE 
                           122                            371 
[1] "DEL PEAK 25(10Q26.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE 
                           142                            351 
  DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE 
                           142                            351 
[1] "DEL PEAK 26(11P15.5) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE 
                           135                            358 
  DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE 
                           135                            358 
[1] "DEL PEAK 27(11Q23.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 27(11Q23.2) MUTATED DEL PEAK 27(11Q23.2) WILD-TYPE 
                           116                            377 
  DEL PEAK 27(11Q23.2) MUTATED DEL PEAK 27(11Q23.2) WILD-TYPE 
                           116                            377 
[1] "DEL PEAK 28(11Q25) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 28(11Q25) MUTATED DEL PEAK 28(11Q25) WILD-TYPE 
                         112                          381 
  DEL PEAK 28(11Q25) MUTATED DEL PEAK 28(11Q25) WILD-TYPE 
                         112                          381 
[1] "DEL PEAK 29(12P13.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 29(12P13.2) MUTATED DEL PEAK 29(12P13.2) WILD-TYPE 
                           134                            359 
  DEL PEAK 29(12P13.2) MUTATED DEL PEAK 29(12P13.2) WILD-TYPE 
                           134                            359 
[1] "DEL PEAK 30(12Q12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE 
                          94                          399 
  DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE 
                          94                          399 
[1] "DEL PEAK 31(12Q24.33) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 31(12Q24.33) MUTATED DEL PEAK 31(12Q24.33) WILD-TYPE 
                            123                             370 
  DEL PEAK 31(12Q24.33) MUTATED DEL PEAK 31(12Q24.33) WILD-TYPE 
                            123                             370 
[1] "DEL PEAK 32(13Q12.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE 
                            282                             211 
  DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE 
                            282                             211 
[1] "DEL PEAK 33(13Q12.13) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 33(13Q12.13) MUTATED DEL PEAK 33(13Q12.13) WILD-TYPE 
                            282                             211 
  DEL PEAK 33(13Q12.13) MUTATED DEL PEAK 33(13Q12.13) WILD-TYPE 
                            282                             211 
[1] "DEL PEAK 34(13Q14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE 
                           271                            222 
  DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE 
                           271                            222 
[1] "DEL PEAK 35(13Q34) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 35(13Q34) MUTATED DEL PEAK 35(13Q34) WILD-TYPE 
                         232                          261 
  DEL PEAK 35(13Q34) MUTATED DEL PEAK 35(13Q34) WILD-TYPE 
                         232                          261 
[1] "DEL PEAK 36(14Q32.33) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 36(14Q32.33) MUTATED DEL PEAK 36(14Q32.33) WILD-TYPE 
                            144                             349 
  DEL PEAK 36(14Q32.33) MUTATED DEL PEAK 36(14Q32.33) WILD-TYPE 
                            144                             349 
[1] "DEL PEAK 37(15Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 37(15Q11.2) MUTATED DEL PEAK 37(15Q11.2) WILD-TYPE 
                           253                            240 
  DEL PEAK 37(15Q11.2) MUTATED DEL PEAK 37(15Q11.2) WILD-TYPE 
                           253                            240 
[1] "DEL PEAK 38(16Q23.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE 
                           167                            326 
  DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE 
                           167                            326 
[1] "DEL PEAK 39(17P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 39(17P13.3) MUTATED DEL PEAK 39(17P13.3) WILD-TYPE 
                           265                            228 
  DEL PEAK 39(17P13.3) MUTATED DEL PEAK 39(17P13.3) WILD-TYPE 
                           265                            228 
[1] "DEL PEAK 40(17P11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE 
                           216                            277 
  DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE 
                           216                            277 
[1] "DEL PEAK 41(18Q21.32) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 41(18Q21.32) MUTATED DEL PEAK 41(18Q21.32) WILD-TYPE 
                            241                             252 
  DEL PEAK 41(18Q21.32) MUTATED DEL PEAK 41(18Q21.32) WILD-TYPE 
                            241                             252 
[1] "DEL PEAK 42(18Q23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE 
                         238                          255 
  DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE 
                         238                          255 
[1] "DEL PEAK 43(19P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE 
                           265                            228 
  DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE 
                           265                            228 
[1] "DEL PEAK 44(19P13.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 44(19P13.2) MUTATED DEL PEAK 44(19P13.2) WILD-TYPE 
                           260                            233 
  DEL PEAK 44(19P13.2) MUTATED DEL PEAK 44(19P13.2) WILD-TYPE 
                           260                            233 
[1] "DEL PEAK 45(19Q13.33) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 45(19Q13.33) MUTATED DEL PEAK 45(19Q13.33) WILD-TYPE 
                            187                             306 
  DEL PEAK 45(19Q13.33) MUTATED DEL PEAK 45(19Q13.33) WILD-TYPE 
                            187                             306 
[1] "DEL PEAK 46(20P13) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 46(20P13) MUTATED DEL PEAK 46(20P13) WILD-TYPE 
                         126                          367 
  DEL PEAK 46(20P13) MUTATED DEL PEAK 46(20P13) WILD-TYPE 
                         126                          367 
[1] "DEL PEAK 47(20Q13.12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 47(20Q13.12) MUTATED DEL PEAK 47(20Q13.12) WILD-TYPE 
                             81                             412 
  DEL PEAK 47(20Q13.12) MUTATED DEL PEAK 47(20Q13.12) WILD-TYPE 
                             81                             412 
[1] "DEL PEAK 48(21Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE 
                           167                            326 
  DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE 
                           167                            326 
[1] "DEL PEAK 49(22Q13.32) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE 
                            240                             253 
  DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE 
                            240                             253 
[1] "DEL PEAK 50(XP22.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE 
                          135                           358 
  DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE 
                          135                           358 
[1] "terrence_modification_tag"
[1] TRUE
[1] "data2feature, selection=ALL"
 [1] "MRNA_CNMF"                   "MRNA_CHIERARCHICAL"         
 [3] "CN_CNMF"                     "METHLYATION_CNMF"           
 [5] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [7] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [9] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[11] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 12 rows and 493 columns.

Variable 1:'MRNA_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'MRNA_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'METHLYATION_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'RPPA_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'RPPA_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MRNASEQ_CNMF':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=9,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=6,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 11:'MIRSEQ_MATURE_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 12:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
 [1] "MRNA_CNMF"                   "MRNA_CHIERARCHICAL"         
 [3] "CN_CNMF"                     "METHLYATION_CNMF"           
 [5] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [7] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [9] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[11] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 493 columns, 0 survival variables, and 12 non-survival variables.
MRNA_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNA_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=4, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=5, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=9, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=6, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = AMP PEAK  1(1P34.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P34.3) MUTATED        0      3      4      1
  AMP PEAK  1(1P34.3) WILD-TYPE      5      6      8      5
D1V1, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                           0                             5
  CLUS_2                           3                             6
  CLUS_3                           4                             8
  CLUS_4                           1                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.3) MUTATED        5      2      1
  AMP PEAK  1(1P34.3) WILD-TYPE      9      9      6
D1V2, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                           5                             9
  CLUS_2                           2                             9
  CLUS_3                           1                             6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.3) MUTATED       80     34     18
  AMP PEAK  1(1P34.3) WILD-TYPE    106    182     73
D1V3, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          80                           106
  CLUS_2                          34                           182
  CLUS_3                          18                            73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P34.3) MUTATED       25     40     29     22
  AMP PEAK  1(1P34.3) WILD-TYPE     67     85     86     77
D1V4, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          25                            67
  CLUS_2                          40                            85
  CLUS_3                          29                            86
  CLUS_4                          22                            77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.3) MUTATED       35     18     20
  AMP PEAK  1(1P34.3) WILD-TYPE     59     50     53
D1V5, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          35                            59
  CLUS_2                          18                            50
  CLUS_3                          20                            53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.3) MUTATED       43     18     12
  AMP PEAK  1(1P34.3) WILD-TYPE     69     53     40
D1V6, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          43                            69
  CLUS_2                          18                            53
  CLUS_3                          12                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  1(1P34.3) MUTATED       44     30     12     34     11
  AMP PEAK  1(1P34.3) WILD-TYPE     94     82     64     72     43
D1V7, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          44                            94
  CLUS_2                          30                            82
  CLUS_3                          12                            64
  CLUS_4                          34                            72
  CLUS_5                          11                            43
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  1(1P34.3) MUTATED       28     19      7     36      7     11
  AMP PEAK  1(1P34.3) WILD-TYPE     55     38     37     48     39     40
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  AMP PEAK  1(1P34.3) MUTATED        9      2     12
  AMP PEAK  1(1P34.3) WILD-TYPE     40     16     42
D1V8, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          28                            55
  CLUS_2                          19                            38
  CLUS_3                           7                            37
  CLUS_4                          36                            48
  CLUS_5                           7                            39
  CLUS_6                          11                            40
  CLUS_7                           9                            40
  CLUS_8                           2                            16
  CLUS_9                          12                            42
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.3) MUTATED       42     63     27
  AMP PEAK  1(1P34.3) WILD-TYPE    137    168     51
D1V9, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          42                           137
  CLUS_2                          63                           168
  CLUS_3                          27                            51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  1(1P34.3) MUTATED       15     10     24     38     34     11
  AMP PEAK  1(1P34.3) WILD-TYPE     56     34     94     99     49     24
D1V10, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          15                            56
  CLUS_2                          10                            34
  CLUS_3                          24                            94
  CLUS_4                          38                            99
  CLUS_5                          34                            49
  CLUS_6                          11                            24
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.3) MUTATED       40     49     27
  AMP PEAK  1(1P34.3) WILD-TYPE    115    143     51
D1V11, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          40                           115
  CLUS_2                          49                           143
  CLUS_3                          27                            51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.3) MUTATED       45     57     14
  AMP PEAK  1(1P34.3) WILD-TYPE    141    152     16
D1V12, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          45                           141
  CLUS_2                          57                           152
  CLUS_3                          14                            16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(2) Variable = AMP PEAK  2(1P22.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1P22.3) MUTATED        1      3      2      1
  AMP PEAK  2(1P22.3) WILD-TYPE      4      6     10      5
D2V1, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                           1                             4
  CLUS_2                           3                             6
  CLUS_3                           2                            10
  CLUS_4                           1                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1P22.3) MUTATED        3      3      1
  AMP PEAK  2(1P22.3) WILD-TYPE     11      8      6
D2V2, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                           3                            11
  CLUS_2                           3                             8
  CLUS_3                           1                             6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1P22.3) MUTATED       81     31     21
  AMP PEAK  2(1P22.3) WILD-TYPE    105    185     70
D2V3, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                          81                           105
  CLUS_2                          31                           185
  CLUS_3                          21                            70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1P22.3) MUTATED       20     36     37     25
  AMP PEAK  2(1P22.3) WILD-TYPE     72     89     78     74
D2V4, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                          20                            72
  CLUS_2                          36                            89
  CLUS_3                          37                            78
  CLUS_4                          25                            74
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1P22.3) MUTATED       31     18     19
  AMP PEAK  2(1P22.3) WILD-TYPE     63     50     54
D2V5, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                          31                            63
  CLUS_2                          18                            50
  CLUS_3                          19                            54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1P22.3) MUTATED       39     18     11
  AMP PEAK  2(1P22.3) WILD-TYPE     73     53     41
D2V6, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                          39                            73
  CLUS_2                          18                            53
  CLUS_3                          11                            41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  2(1P22.3) MUTATED       49     27     16     31      9
  AMP PEAK  2(1P22.3) WILD-TYPE     89     85     60     75     45
D2V7, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                          49                            89
  CLUS_2                          27                            85
  CLUS_3                          16                            60
  CLUS_4                          31                            75
  CLUS_5                           9                            45
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  2(1P22.3) MUTATED       28     15     11     34      7     11
  AMP PEAK  2(1P22.3) WILD-TYPE     55     42     33     50     39     40
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  AMP PEAK  2(1P22.3) MUTATED       15      2      9
  AMP PEAK  2(1P22.3) WILD-TYPE     34     16     45
D2V8, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                          28                            55
  CLUS_2                          15                            42
  CLUS_3                          11                            33
  CLUS_4                          34                            50
  CLUS_5                           7                            39
  CLUS_6                          11                            40
  CLUS_7                          15                            34
  CLUS_8                           2                            16
  CLUS_9                           9                            45
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1P22.3) MUTATED       38     71     23
  AMP PEAK  2(1P22.3) WILD-TYPE    141    160     55
D2V9, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                          38                           141
  CLUS_2                          71                           160
  CLUS_3                          23                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  2(1P22.3) MUTATED       17      9     33     34     34      5
  AMP PEAK  2(1P22.3) WILD-TYPE     54     35     85    103     49     30
D2V10, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                          17                            54
  CLUS_2                           9                            35
  CLUS_3                          33                            85
  CLUS_4                          34                           103
  CLUS_5                          34                            49
  CLUS_6                           5                            30
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1P22.3) MUTATED       44     56     17
  AMP PEAK  2(1P22.3) WILD-TYPE    111    136     61
D2V11, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                          44                           111
  CLUS_2                          56                           136
  CLUS_3                          17                            61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1P22.3) MUTATED       47     64      6
  AMP PEAK  2(1P22.3) WILD-TYPE    139    145     24
D2V12, multiclass
        clus
vv       AMP PEAK  2(1P22.3) MUTATED AMP PEAK  2(1P22.3) WILD-TYPE
  CLUS_1                          47                           139
  CLUS_2                          64                           145
  CLUS_3                           6                            24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(3) Variable = AMP PEAK  3(1Q21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q21.3) MUTATED        4      7      7      2
  AMP PEAK  3(1Q21.3) WILD-TYPE      1      2      5      4
D3V1, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                           4                             1
  CLUS_2                           7                             2
  CLUS_3                           7                             5
  CLUS_4                           2                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q21.3) MUTATED        9      8      3
  AMP PEAK  3(1Q21.3) WILD-TYPE      5      3      4
D3V2, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                           9                             5
  CLUS_2                           8                             3
  CLUS_3                           3                             4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q21.3) MUTATED      150    131     78
  AMP PEAK  3(1Q21.3) WILD-TYPE     36     85     13
D3V3, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                         150                            36
  CLUS_2                         131                            85
  CLUS_3                          78                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q21.3) MUTATED       58    114     92     53
  AMP PEAK  3(1Q21.3) WILD-TYPE     34     11     23     46
D3V4, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          58                            34
  CLUS_2                         114                            11
  CLUS_3                          92                            23
  CLUS_4                          53                            46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q21.3) MUTATED       70     56     53
  AMP PEAK  3(1Q21.3) WILD-TYPE     24     12     20
D3V5, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          70                            24
  CLUS_2                          56                            12
  CLUS_3                          53                            20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q21.3) MUTATED       85     55     39
  AMP PEAK  3(1Q21.3) WILD-TYPE     27     16     13
D3V6, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          85                            27
  CLUS_2                          55                            16
  CLUS_3                          39                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  3(1Q21.3) MUTATED      102     79     47     90     35
  AMP PEAK  3(1Q21.3) WILD-TYPE     36     33     29     16     19
D3V7, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                         102                            36
  CLUS_2                          79                            33
  CLUS_3                          47                            29
  CLUS_4                          90                            16
  CLUS_5                          35                            19
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  3(1Q21.3) MUTATED       65     39     23     60     44     43
  AMP PEAK  3(1Q21.3) WILD-TYPE     18     18     21     24      2      8
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  AMP PEAK  3(1Q21.3) MUTATED       38      5     36
  AMP PEAK  3(1Q21.3) WILD-TYPE     11     13     18
D3V8, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          65                            18
  CLUS_2                          39                            18
  CLUS_3                          23                            21
  CLUS_4                          60                            24
  CLUS_5                          44                             2
  CLUS_6                          43                             8
  CLUS_7                          38                            11
  CLUS_8                           5                            13
  CLUS_9                          36                            18
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q21.3) MUTATED      118    183     54
  AMP PEAK  3(1Q21.3) WILD-TYPE     61     48     24
D3V9, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                         118                            61
  CLUS_2                         183                            48
  CLUS_3                          54                            24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  3(1Q21.3) MUTATED       55     42     88     83     65     22
  AMP PEAK  3(1Q21.3) WILD-TYPE     16      2     30     54     18     13
D3V10, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          55                            16
  CLUS_2                          42                             2
  CLUS_3                          88                            30
  CLUS_4                          83                            54
  CLUS_5                          65                            18
  CLUS_6                          22                            13
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q21.3) MUTATED      114    151     48
  AMP PEAK  3(1Q21.3) WILD-TYPE     41     41     30
D3V11, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                         114                            41
  CLUS_2                         151                            41
  CLUS_3                          48                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q21.3) MUTATED      131    166     16
  AMP PEAK  3(1Q21.3) WILD-TYPE     55     43     14
D3V12, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                         131                            55
  CLUS_2                         166                            43
  CLUS_3                          16                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(4) Variable = AMP PEAK  4(3Q26.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3Q26.2) MUTATED        0      6      0      4
  AMP PEAK  4(3Q26.2) WILD-TYPE      5      3     12      2
D4V1, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                           0                             5
  CLUS_2                           6                             3
  CLUS_3                           0                            12
  CLUS_4                           4                             2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3Q26.2) MUTATED        0      6      4
  AMP PEAK  4(3Q26.2) WILD-TYPE     14      5      3
D4V2, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                           0                            14
  CLUS_2                           6                             5
  CLUS_3                           4                             3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3Q26.2) MUTATED       74     47     42
  AMP PEAK  4(3Q26.2) WILD-TYPE    112    169     49
D4V3, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          74                           112
  CLUS_2                          47                           169
  CLUS_3                          42                            49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3Q26.2) MUTATED        7     59     38     35
  AMP PEAK  4(3Q26.2) WILD-TYPE     85     66     77     64
D4V4, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                           7                            85
  CLUS_2                          59                            66
  CLUS_3                          38                            77
  CLUS_4                          35                            64
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3Q26.2) MUTATED       37     16     35
  AMP PEAK  4(3Q26.2) WILD-TYPE     57     52     38
D4V5, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          37                            57
  CLUS_2                          16                            52
  CLUS_3                          35                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3Q26.2) MUTATED       50     15     23
  AMP PEAK  4(3Q26.2) WILD-TYPE     62     56     29
D4V6, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          50                            62
  CLUS_2                          15                            56
  CLUS_3                          23                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  4(3Q26.2) MUTATED       56      7     32     50     17
  AMP PEAK  4(3Q26.2) WILD-TYPE     82    105     44     56     37
D4V7, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          56                            82
  CLUS_2                           7                           105
  CLUS_3                          32                            44
  CLUS_4                          50                            56
  CLUS_5                          17                            37
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  4(3Q26.2) MUTATED       23      5     20     57      5     17
  AMP PEAK  4(3Q26.2) WILD-TYPE     60     52     24     27     41     34
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  AMP PEAK  4(3Q26.2) MUTATED       18      5     12
  AMP PEAK  4(3Q26.2) WILD-TYPE     31     13     42
D4V8, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          23                            60
  CLUS_2                           5                            52
  CLUS_3                          20                            24
  CLUS_4                          57                            27
  CLUS_5                           5                            41
  CLUS_6                          17                            34
  CLUS_7                          18                            31
  CLUS_8                           5                            13
  CLUS_9                          12                            42
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3Q26.2) MUTATED       38    102     21
  AMP PEAK  4(3Q26.2) WILD-TYPE    141    129     57
D4V9, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          38                           141
  CLUS_2                         102                           129
  CLUS_3                          21                            57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  4(3Q26.2) MUTATED       11     13     48     37     46      6
  AMP PEAK  4(3Q26.2) WILD-TYPE     60     31     70    100     37     29
D4V10, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          11                            60
  CLUS_2                          13                            31
  CLUS_3                          48                            70
  CLUS_4                          37                           100
  CLUS_5                          46                            37
  CLUS_6                           6                            29
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3Q26.2) MUTATED       34     80     23
  AMP PEAK  4(3Q26.2) WILD-TYPE    121    112     55
D4V11, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          34                           121
  CLUS_2                          80                           112
  CLUS_3                          23                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3Q26.2) MUTATED       40     92      5
  AMP PEAK  4(3Q26.2) WILD-TYPE    146    117     25
D4V12, multiclass
        clus
vv       AMP PEAK  4(3Q26.2) MUTATED AMP PEAK  4(3Q26.2) WILD-TYPE
  CLUS_1                          40                           146
  CLUS_2                          92                           117
  CLUS_3                           5                            25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(5) Variable = AMP PEAK  5(4Q12) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(4Q12) MUTATED        1      3      3      3
  AMP PEAK  5(4Q12) WILD-TYPE      4      6      9      3
D5V1, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                         1                           4
  CLUS_2                         3                           6
  CLUS_3                         3                           9
  CLUS_4                         3                           3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(4Q12) MUTATED        4      2      4
  AMP PEAK  5(4Q12) WILD-TYPE     10      9      3
D5V2, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                         4                          10
  CLUS_2                         2                           9
  CLUS_3                         4                           3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(4Q12) MUTATED       62     19     12
  AMP PEAK  5(4Q12) WILD-TYPE    124    197     79
D5V3, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        62                         124
  CLUS_2                        19                         197
  CLUS_3                        12                          79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(4Q12) MUTATED       12     30     22     14
  AMP PEAK  5(4Q12) WILD-TYPE     80     95     93     85
D5V4, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        12                          80
  CLUS_2                        30                          95
  CLUS_3                        22                          93
  CLUS_4                        14                          85
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(4Q12) MUTATED       22      8     17
  AMP PEAK  5(4Q12) WILD-TYPE     72     60     56
D5V5, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        22                          72
  CLUS_2                         8                          60
  CLUS_3                        17                          56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(4Q12) MUTATED       27      6     14
  AMP PEAK  5(4Q12) WILD-TYPE     85     65     38
D5V6, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        27                          85
  CLUS_2                         6                          65
  CLUS_3                        14                          38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  5(4Q12) MUTATED       38     12     12     24      6
  AMP PEAK  5(4Q12) WILD-TYPE    100    100     64     82     48
D5V7, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        38                         100
  CLUS_2                        12                         100
  CLUS_3                        12                          64
  CLUS_4                        24                          82
  CLUS_5                         6                          48
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK  5(4Q12) MUTATED       20      6     11     25      5      9     11
  AMP PEAK  5(4Q12) WILD-TYPE     63     51     33     59     41     42     38
                             vv
clus                          CLUS_8 CLUS_9
  AMP PEAK  5(4Q12) MUTATED        1      4
  AMP PEAK  5(4Q12) WILD-TYPE     17     50
D5V8, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        20                          63
  CLUS_2                         6                          51
  CLUS_3                        11                          33
  CLUS_4                        25                          59
  CLUS_5                         5                          41
  CLUS_6                         9                          42
  CLUS_7                        11                          38
  CLUS_8                         1                          17
  CLUS_9                         4                          50
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(4Q12) MUTATED       21     54     18
  AMP PEAK  5(4Q12) WILD-TYPE    158    177     60
D5V9, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        21                         158
  CLUS_2                        54                         177
  CLUS_3                        18                          60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  5(4Q12) MUTATED        8      8     28     17     21     11
  AMP PEAK  5(4Q12) WILD-TYPE     63     36     90    120     62     24
D5V10, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                         8                          63
  CLUS_2                         8                          36
  CLUS_3                        28                          90
  CLUS_4                        17                         120
  CLUS_5                        21                          62
  CLUS_6                        11                          24
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(4Q12) MUTATED       20     42     15
  AMP PEAK  5(4Q12) WILD-TYPE    135    150     63
D5V11, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        20                         135
  CLUS_2                        42                         150
  CLUS_3                        15                          63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(4Q12) MUTATED       20     49      8
  AMP PEAK  5(4Q12) WILD-TYPE    166    160     22
D5V12, multiclass
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  CLUS_1                        20                         166
  CLUS_2                        49                         160
  CLUS_3                         8                          22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(6) Variable = AMP PEAK  6(5P15.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(5P15.33) MUTATED        4      5      7      4
  AMP PEAK  6(5P15.33) WILD-TYPE      1      4      5      2
D6V1, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                            4                              1
  CLUS_2                            5                              4
  CLUS_3                            7                              5
  CLUS_4                            4                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(5P15.33) MUTATED        9      6      5
  AMP PEAK  6(5P15.33) WILD-TYPE      5      5      2
D6V2, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                            9                              5
  CLUS_2                            6                              5
  CLUS_3                            5                              2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(5P15.33) MUTATED      163     99     57
  AMP PEAK  6(5P15.33) WILD-TYPE     23    117     34
D6V3, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                          163                             23
  CLUS_2                           99                            117
  CLUS_3                           57                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(5P15.33) MUTATED       55     91     75     61
  AMP PEAK  6(5P15.33) WILD-TYPE     37     34     40     38
D6V4, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           55                             37
  CLUS_2                           91                             34
  CLUS_3                           75                             40
  CLUS_4                           61                             38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(5P15.33) MUTATED       72     42     48
  AMP PEAK  6(5P15.33) WILD-TYPE     22     26     25
D6V5, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           72                             22
  CLUS_2                           42                             26
  CLUS_3                           48                             25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(5P15.33) MUTATED       83     41     38
  AMP PEAK  6(5P15.33) WILD-TYPE     29     30     14
D6V6, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           83                             29
  CLUS_2                           41                             30
  CLUS_3                           38                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  6(5P15.33) MUTATED      111     63     33     73     33
  AMP PEAK  6(5P15.33) WILD-TYPE     27     49     43     33     21
D6V7, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                          111                             27
  CLUS_2                           63                             49
  CLUS_3                           33                             43
  CLUS_4                           73                             33
  CLUS_5                           33                             21
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  6(5P15.33) MUTATED       65     33     28     70     20     34
  AMP PEAK  6(5P15.33) WILD-TYPE     18     24     16     14     26     17
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK  6(5P15.33) MUTATED       30      0     33
  AMP PEAK  6(5P15.33) WILD-TYPE     19     18     21
D6V8, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           65                             18
  CLUS_2                           33                             24
  CLUS_3                           28                             16
  CLUS_4                           70                             14
  CLUS_5                           20                             26
  CLUS_6                           34                             17
  CLUS_7                           30                             19
  CLUS_8                            0                             18
  CLUS_9                           33                             21
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(5P15.33) MUTATED      100    166     52
  AMP PEAK  6(5P15.33) WILD-TYPE     79     65     26
D6V9, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                          100                             79
  CLUS_2                          166                             65
  CLUS_3                           52                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  6(5P15.33) MUTATED       46     30     82     72     64     24
  AMP PEAK  6(5P15.33) WILD-TYPE     25     14     36     65     19     11
D6V10, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           46                             25
  CLUS_2                           30                             14
  CLUS_3                           82                             36
  CLUS_4                           72                             65
  CLUS_5                           64                             19
  CLUS_6                           24                             11
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(5P15.33) MUTATED       89    138     51
  AMP PEAK  6(5P15.33) WILD-TYPE     66     54     27
D6V11, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                           89                             66
  CLUS_2                          138                             54
  CLUS_3                           51                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(5P15.33) MUTATED      101    157     20
  AMP PEAK  6(5P15.33) WILD-TYPE     85     52     10
D6V12, multiclass
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  CLUS_1                          101                             85
  CLUS_2                          157                             52
  CLUS_3                           20                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(7) Variable = AMP PEAK  7(5P13.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P13.1) MUTATED        5      5      6      3
  AMP PEAK  7(5P13.1) WILD-TYPE      0      4      6      3
D7V1, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                           5                             0
  CLUS_2                           5                             4
  CLUS_3                           6                             6
  CLUS_4                           3                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P13.1) MUTATED        8      7      4
  AMP PEAK  7(5P13.1) WILD-TYPE      6      4      3
D7V2, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                           8                             6
  CLUS_2                           7                             4
  CLUS_3                           4                             3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P13.1) MUTATED      148     87     56
  AMP PEAK  7(5P13.1) WILD-TYPE     38    129     35
D7V3, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                         148                            38
  CLUS_2                          87                           129
  CLUS_3                          56                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P13.1) MUTATED       50     90     64     57
  AMP PEAK  7(5P13.1) WILD-TYPE     42     35     51     42
D7V4, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                          50                            42
  CLUS_2                          90                            35
  CLUS_3                          64                            51
  CLUS_4                          57                            42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P13.1) MUTATED       63     40     45
  AMP PEAK  7(5P13.1) WILD-TYPE     31     28     28
D7V5, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                          63                            31
  CLUS_2                          40                            28
  CLUS_3                          45                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P13.1) MUTATED       73     39     36
  AMP PEAK  7(5P13.1) WILD-TYPE     39     32     16
D7V6, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                          73                            39
  CLUS_2                          39                            32
  CLUS_3                          36                            16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  7(5P13.1) MUTATED       94     55     29     76     31
  AMP PEAK  7(5P13.1) WILD-TYPE     44     57     47     30     23
D7V7, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                          94                            44
  CLUS_2                          55                            57
  CLUS_3                          29                            47
  CLUS_4                          76                            30
  CLUS_5                          31                            23
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  7(5P13.1) MUTATED       59     29     22     67     18     36
  AMP PEAK  7(5P13.1) WILD-TYPE     24     28     22     17     28     15
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  AMP PEAK  7(5P13.1) MUTATED       24      0     30
  AMP PEAK  7(5P13.1) WILD-TYPE     25     18     24
D7V8, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                          59                            24
  CLUS_2                          29                            28
  CLUS_3                          22                            22
  CLUS_4                          67                            17
  CLUS_5                          18                            28
  CLUS_6                          36                            15
  CLUS_7                          24                            25
  CLUS_8                           0                            18
  CLUS_9                          30                            24
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P13.1) MUTATED       86    155     49
  AMP PEAK  7(5P13.1) WILD-TYPE     93     76     29
D7V9, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                          86                            93
  CLUS_2                         155                            76
  CLUS_3                          49                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  7(5P13.1) MUTATED       41     28     73     64     61     23
  AMP PEAK  7(5P13.1) WILD-TYPE     30     16     45     73     22     12
D7V10, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                          41                            30
  CLUS_2                          28                            16
  CLUS_3                          73                            45
  CLUS_4                          64                            73
  CLUS_5                          61                            22
  CLUS_6                          23                            12
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P13.1) MUTATED       79    130     47
  AMP PEAK  7(5P13.1) WILD-TYPE     76     62     31
D7V11, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                          79                            76
  CLUS_2                         130                            62
  CLUS_3                          47                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P13.1) MUTATED       90    147     19
  AMP PEAK  7(5P13.1) WILD-TYPE     96     62     11
D7V12, multiclass
        clus
vv       AMP PEAK  7(5P13.1) MUTATED AMP PEAK  7(5P13.1) WILD-TYPE
  CLUS_1                          90                            96
  CLUS_2                         147                            62
  CLUS_3                          19                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(8) Variable = AMP PEAK  8(5Q35.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(5Q35.1) MUTATED        3      2      6      0
  AMP PEAK  8(5Q35.1) WILD-TYPE      2      7      6      6
D8V1, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                           3                             2
  CLUS_2                           2                             7
  CLUS_3                           6                             6
  CLUS_4                           0                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5Q35.1) MUTATED        7      3      1
  AMP PEAK  8(5Q35.1) WILD-TYPE      7      8      6
D8V2, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                           7                             7
  CLUS_2                           3                             8
  CLUS_3                           1                             6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5Q35.1) MUTATED       55     54     14
  AMP PEAK  8(5Q35.1) WILD-TYPE    131    162     77
D8V3, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                          55                           131
  CLUS_2                          54                           162
  CLUS_3                          14                            77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(5Q35.1) MUTATED       41     27     25     18
  AMP PEAK  8(5Q35.1) WILD-TYPE     51     98     90     81
D8V4, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                          41                            51
  CLUS_2                          27                            98
  CLUS_3                          25                            90
  CLUS_4                          18                            81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5Q35.1) MUTATED       24     23     10
  AMP PEAK  8(5Q35.1) WILD-TYPE     70     45     63
D8V5, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                          24                            70
  CLUS_2                          23                            45
  CLUS_3                          10                            63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5Q35.1) MUTATED       31     20      6
  AMP PEAK  8(5Q35.1) WILD-TYPE     81     51     46
D8V6, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                          31                            81
  CLUS_2                          20                            51
  CLUS_3                           6                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  8(5Q35.1) MUTATED       34     42      8     20     16
  AMP PEAK  8(5Q35.1) WILD-TYPE    104     70     68     86     38
D8V7, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                          34                           104
  CLUS_2                          42                            70
  CLUS_3                           8                            68
  CLUS_4                          20                            86
  CLUS_5                          16                            38
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  8(5Q35.1) MUTATED       23     23      7     23     12      9
  AMP PEAK  8(5Q35.1) WILD-TYPE     60     34     37     61     34     42
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  AMP PEAK  8(5Q35.1) MUTATED        6      0     17
  AMP PEAK  8(5Q35.1) WILD-TYPE     43     18     37
D8V8, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                          23                            60
  CLUS_2                          23                            34
  CLUS_3                           7                            37
  CLUS_4                          23                            61
  CLUS_5                          12                            34
  CLUS_6                           9                            42
  CLUS_7                           6                            43
  CLUS_8                           0                            18
  CLUS_9                          17                            37
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5Q35.1) MUTATED       59     41     23
  AMP PEAK  8(5Q35.1) WILD-TYPE    120    190     55
D8V9, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                          59                           120
  CLUS_2                          41                           190
  CLUS_3                          23                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  8(5Q35.1) MUTATED       36     12     18     32     11     14
  AMP PEAK  8(5Q35.1) WILD-TYPE     35     32    100    105     72     21
D8V10, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                          36                            35
  CLUS_2                          12                            32
  CLUS_3                          18                           100
  CLUS_4                          32                           105
  CLUS_5                          11                            72
  CLUS_6                          14                            21
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5Q35.1) MUTATED       50     34     25
  AMP PEAK  8(5Q35.1) WILD-TYPE    105    158     53
D8V11, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                          50                           105
  CLUS_2                          34                           158
  CLUS_3                          25                            53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5Q35.1) MUTATED       60     36     13
  AMP PEAK  8(5Q35.1) WILD-TYPE    126    173     17
D8V12, multiclass
        clus
vv       AMP PEAK  8(5Q35.1) MUTATED AMP PEAK  8(5Q35.1) WILD-TYPE
  CLUS_1                          60                           126
  CLUS_2                          36                           173
  CLUS_3                          13                            17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(9) Variable = AMP PEAK  9(6P21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6P21.1) MUTATED        1      2      4      3
  AMP PEAK  9(6P21.1) WILD-TYPE      4      7      8      3
D9V1, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                           1                             4
  CLUS_2                           2                             7
  CLUS_3                           4                             8
  CLUS_4                           3                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED        4      2      4
  AMP PEAK  9(6P21.1) WILD-TYPE     10      9      3
D9V2, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                           4                            10
  CLUS_2                           2                             9
  CLUS_3                           4                             3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED       82     55     49
  AMP PEAK  9(6P21.1) WILD-TYPE    104    161     42
D9V3, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          82                           104
  CLUS_2                          55                           161
  CLUS_3                          49                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6P21.1) MUTATED       28     76     45     16
  AMP PEAK  9(6P21.1) WILD-TYPE     64     49     70     83
D9V4, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          28                            64
  CLUS_2                          76                            49
  CLUS_3                          45                            70
  CLUS_4                          16                            83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED       28     32     28
  AMP PEAK  9(6P21.1) WILD-TYPE     66     36     45
D9V5, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          28                            66
  CLUS_2                          32                            36
  CLUS_3                          28                            45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED       42     27     19
  AMP PEAK  9(6P21.1) WILD-TYPE     70     44     33
D9V6, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          42                            70
  CLUS_2                          27                            44
  CLUS_3                          19                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  9(6P21.1) MUTATED       46     41     20     56     19
  AMP PEAK  9(6P21.1) WILD-TYPE     92     71     56     50     35
D9V7, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          46                            92
  CLUS_2                          41                            71
  CLUS_3                          20                            56
  CLUS_4                          56                            50
  CLUS_5                          19                            35
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  9(6P21.1) MUTATED       28     20     12     40     24     24
  AMP PEAK  9(6P21.1) WILD-TYPE     55     37     32     44     22     27
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  AMP PEAK  9(6P21.1) MUTATED       16      0     18
  AMP PEAK  9(6P21.1) WILD-TYPE     33     18     36
D9V8, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          28                            55
  CLUS_2                          20                            37
  CLUS_3                          12                            32
  CLUS_4                          40                            44
  CLUS_5                          24                            22
  CLUS_6                          24                            27
  CLUS_7                          16                            33
  CLUS_8                           0                            18
  CLUS_9                          18                            36
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED       54    101     27
  AMP PEAK  9(6P21.1) WILD-TYPE    125    130     51
D9V9, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          54                           125
  CLUS_2                         101                           130
  CLUS_3                          27                            51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  9(6P21.1) MUTATED       22     18     50     42     38     12
  AMP PEAK  9(6P21.1) WILD-TYPE     49     26     68     95     45     23
D9V10, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          22                            49
  CLUS_2                          18                            26
  CLUS_3                          50                            68
  CLUS_4                          42                            95
  CLUS_5                          38                            45
  CLUS_6                          12                            23
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED       52     86     27
  AMP PEAK  9(6P21.1) WILD-TYPE    103    106     51
D9V11, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          52                           103
  CLUS_2                          86                           106
  CLUS_3                          27                            51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED       60     93     12
  AMP PEAK  9(6P21.1) WILD-TYPE    126    116     18
D9V12, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          60                           126
  CLUS_2                          93                           116
  CLUS_3                          12                            18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(10) Variable = AMP PEAK 10(7P21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(7P21.1) MUTATED        4      5      7      3
  AMP PEAK 10(7P21.1) WILD-TYPE      1      4      5      3
D10V1, multiclass
        clus
vv       AMP PEAK 10(7P21.1) MUTATED AMP PEAK 10(7P21.1) WILD-TYPE
  CLUS_1                           4                             1
  CLUS_2                           5                             4
  CLUS_3                           7                             5
  CLUS_4                           3                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(7P21.1) MUTATED        9      6      4
  AMP PEAK 10(7P21.1) WILD-TYPE      5      5      3
D10V2, multiclass
        clus
vv       AMP PEAK 10(7P21.1) MUTATED AMP PEAK 10(7P21.1) WILD-TYPE
  CLUS_1                           9                             5
  CLUS_2                           6                             5
  CLUS_3                           4                             3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(7P21.1) MUTATED      155     80     35
  AMP PEAK 10(7P21.1) WILD-TYPE     31    136     56
D10V3, multiclass
        clus
vv       AMP PEAK 10(7P21.1) MUTATED AMP PEAK 10(7P21.1) WILD-TYPE
  CLUS_1                         155                            31
  CLUS_2                          80                           136
  CLUS_3                          35                            56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(7P21.1) MUTATED       37     68     77     52
  AMP PEAK 10(7P21.1) WILD-TYPE     55     57     38     47
D10V4, multiclass
        clus
vv       AMP PEAK 10(7P21.1) MUTATED AMP PEAK 10(7P21.1) WILD-TYPE
  CLUS_1                          37                            55
  CLUS_2                          68                            57
  CLUS_3                          77                            38
  CLUS_4                          52                            47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(7P21.1) MUTATED       64     29     40
  AMP PEAK 10(7P21.1) WILD-TYPE     30     39     33
D10V5, multiclass
        clus
vv       AMP PEAK 10(7P21.1) MUTATED AMP PEAK 10(7P21.1) WILD-TYPE
  CLUS_1                          64                            30
  CLUS_2                          29                            39
  CLUS_3                          40                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(7P21.1) MUTATED       74     30     29
  AMP PEAK 10(7P21.1) WILD-TYPE     38     41     23
D10V6, multiclass
        clus
vv       AMP PEAK 10(7P21.1) MUTATED AMP PEAK 10(7P21.1) WILD-TYPE
  CLUS_1                          74                            38
  CLUS_2                          30                            41
  CLUS_3                          29                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 10(7P21.1) MUTATED      108     43     36     49     29
  AMP PEAK 10(7P21.1) WILD-TYPE     30     69     40     57     25
D10V7, multiclass
        clus
vv       AMP PEAK 10(7P21.1) MUTATED AMP PEAK 10(7P21.1) WILD-TYPE
  CLUS_1                         108                            30
  CLUS_2                          43                            69
  CLUS_3                          36                            40
  CLUS_4                          49                            57
  CLUS_5                          29                            25
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 10(7P21.1) MUTATED       57     26     34     51     10     25
  AMP PEAK 10(7P21.1) WILD-TYPE     26     31     10     33     36     26
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 10(7P21.1) MUTATED       28      2     32
  AMP PEAK 10(7P21.1) WILD-TYPE     21     16     22
D10V8, multiclass
        clus
vv       AMP PEAK 10(7P21.1) MUTATED AMP PEAK 10(7P21.1) WILD-TYPE
  CLUS_1                          57                            26
  CLUS_2                          26                            31
  CLUS_3                          34                            10
  CLUS_4                          51                            33
  CLUS_5                          10                            36
  CLUS_6                          25                            26
  CLUS_7                          28                            21
  CLUS_8                           2                            16
  CLUS_9                          32                            22
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(7P21.1) MUTATED       76    136     55
  AMP PEAK 10(7P21.1) WILD-TYPE    103     95     23
D10V9, multiclass
        clus
vv       AMP PEAK 10(7P21.1) MUTATED AMP PEAK 10(7P21.1) WILD-TYPE
  CLUS_1                          76                           103
  CLUS_2                         136                            95
  CLUS_3                          55                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 10(7P21.1) MUTATED       26     23     76     71     47     24
  AMP PEAK 10(7P21.1) WILD-TYPE     45     21     42     66     36     11
D10V10, multiclass
        clus
vv       AMP PEAK 10(7P21.1) MUTATED AMP PEAK 10(7P21.1) WILD-TYPE
  CLUS_1                          26                            45
  CLUS_2                          23                            21
  CLUS_3                          76                            42
  CLUS_4                          71                            66
  CLUS_5                          47                            36
  CLUS_6                          24                            11
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(7P21.1) MUTATED       68    108     54
  AMP PEAK 10(7P21.1) WILD-TYPE     87     84     24
D10V11, multiclass
        clus
vv       AMP PEAK 10(7P21.1) MUTATED AMP PEAK 10(7P21.1) WILD-TYPE
  CLUS_1                          68                            87
  CLUS_2                         108                            84
  CLUS_3                          54                            24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(7P21.1) MUTATED       79    127     24
  AMP PEAK 10(7P21.1) WILD-TYPE    107     82      6
D10V12, multiclass
        clus
vv       AMP PEAK 10(7P21.1) MUTATED AMP PEAK 10(7P21.1) WILD-TYPE
  CLUS_1                          79                           107
  CLUS_2                         127                            82
  CLUS_3                          24                             6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(11) Variable = AMP PEAK 11(7P11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED        2      5      7      3
  AMP PEAK 11(7P11.2) WILD-TYPE      3      4      5      3
D11V1, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                           2                             3
  CLUS_2                           5                             4
  CLUS_3                           7                             5
  CLUS_4                           3                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED        8      6      3
  AMP PEAK 11(7P11.2) WILD-TYPE      6      5      4
D11V2, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                           8                             6
  CLUS_2                           6                             5
  CLUS_3                           3                             4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED      149     76     35
  AMP PEAK 11(7P11.2) WILD-TYPE     37    140     56
D11V3, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                         149                            37
  CLUS_2                          76                           140
  CLUS_3                          35                            56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED       34     66     72     54
  AMP PEAK 11(7P11.2) WILD-TYPE     58     59     43     45
D11V4, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          34                            58
  CLUS_2                          66                            59
  CLUS_3                          72                            43
  CLUS_4                          54                            45
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       62     25     41
  AMP PEAK 11(7P11.2) WILD-TYPE     32     43     32
D11V5, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          62                            32
  CLUS_2                          25                            43
  CLUS_3                          41                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       71     27     30
  AMP PEAK 11(7P11.2) WILD-TYPE     41     44     22
D11V6, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          71                            41
  CLUS_2                          27                            44
  CLUS_3                          30                            22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 11(7P11.2) MUTATED      106     36     40     46     28
  AMP PEAK 11(7P11.2) WILD-TYPE     32     76     36     60     26
D11V7, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                         106                            32
  CLUS_2                          36                            76
  CLUS_3                          40                            36
  CLUS_4                          46                            60
  CLUS_5                          28                            26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 11(7P11.2) MUTATED       53     23     35     48      9     23
  AMP PEAK 11(7P11.2) WILD-TYPE     30     34      9     36     37     28
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 11(7P11.2) MUTATED       32      2     31
  AMP PEAK 11(7P11.2) WILD-TYPE     17     16     23
D11V8, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          53                            30
  CLUS_2                          23                            34
  CLUS_3                          35                             9
  CLUS_4                          48                            36
  CLUS_5                           9                            37
  CLUS_6                          23                            28
  CLUS_7                          32                            17
  CLUS_8                           2                            16
  CLUS_9                          31                            23
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       66    136     55
  AMP PEAK 11(7P11.2) WILD-TYPE    113     95     23
D11V9, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          66                           113
  CLUS_2                         136                            95
  CLUS_3                          55                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 11(7P11.2) MUTATED       21     23     82     65     43     23
  AMP PEAK 11(7P11.2) WILD-TYPE     50     21     36     72     40     12
D11V10, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          21                            50
  CLUS_2                          23                            21
  CLUS_3                          82                            36
  CLUS_4                          65                            72
  CLUS_5                          43                            40
  CLUS_6                          23                            12
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       58    113     51
  AMP PEAK 11(7P11.2) WILD-TYPE     97     79     27
D11V11, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          58                            97
  CLUS_2                         113                            79
  CLUS_3                          51                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       69    130     23
  AMP PEAK 11(7P11.2) WILD-TYPE    117     79      7
D11V12, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          69                           117
  CLUS_2                         130                            79
  CLUS_3                          23                             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(12) Variable = AMP PEAK 12(7Q31.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q31.2) MUTATED        2      6      4      2
  AMP PEAK 12(7Q31.2) WILD-TYPE      3      3      8      4
D12V1, multiclass
        clus
vv       AMP PEAK 12(7Q31.2) MUTATED AMP PEAK 12(7Q31.2) WILD-TYPE
  CLUS_1                           2                             3
  CLUS_2                           6                             3
  CLUS_3                           4                             8
  CLUS_4                           2                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q31.2) MUTATED        5      7      2
  AMP PEAK 12(7Q31.2) WILD-TYPE      9      4      5
D12V2, multiclass
        clus
vv       AMP PEAK 12(7Q31.2) MUTATED AMP PEAK 12(7Q31.2) WILD-TYPE
  CLUS_1                           5                             9
  CLUS_2                           7                             4
  CLUS_3                           2                             5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q31.2) MUTATED      116     60     30
  AMP PEAK 12(7Q31.2) WILD-TYPE     70    156     61
D12V3, multiclass
        clus
vv       AMP PEAK 12(7Q31.2) MUTATED AMP PEAK 12(7Q31.2) WILD-TYPE
  CLUS_1                         116                            70
  CLUS_2                          60                           156
  CLUS_3                          30                            61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q31.2) MUTATED       27     46     60     45
  AMP PEAK 12(7Q31.2) WILD-TYPE     65     79     55     54
D12V4, multiclass
        clus
vv       AMP PEAK 12(7Q31.2) MUTATED AMP PEAK 12(7Q31.2) WILD-TYPE
  CLUS_1                          27                            65
  CLUS_2                          46                            79
  CLUS_3                          60                            55
  CLUS_4                          45                            54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q31.2) MUTATED       45     25     33
  AMP PEAK 12(7Q31.2) WILD-TYPE     49     43     40
D12V5, multiclass
        clus
vv       AMP PEAK 12(7Q31.2) MUTATED AMP PEAK 12(7Q31.2) WILD-TYPE
  CLUS_1                          45                            49
  CLUS_2                          25                            43
  CLUS_3                          33                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q31.2) MUTATED       57     25     21
  AMP PEAK 12(7Q31.2) WILD-TYPE     55     46     31
D12V6, multiclass
        clus
vv       AMP PEAK 12(7Q31.2) MUTATED AMP PEAK 12(7Q31.2) WILD-TYPE
  CLUS_1                          57                            55
  CLUS_2                          25                            46
  CLUS_3                          21                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 12(7Q31.2) MUTATED       86     24     33     36     23
  AMP PEAK 12(7Q31.2) WILD-TYPE     52     88     43     70     31
D12V7, multiclass
        clus
vv       AMP PEAK 12(7Q31.2) MUTATED AMP PEAK 12(7Q31.2) WILD-TYPE
  CLUS_1                          86                            52
  CLUS_2                          24                            88
  CLUS_3                          33                            43
  CLUS_4                          36                            70
  CLUS_5                          23                            31
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 12(7Q31.2) MUTATED       46     15     33     39      5     15
  AMP PEAK 12(7Q31.2) WILD-TYPE     37     42     11     45     41     36
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 12(7Q31.2) MUTATED       23      2     24
  AMP PEAK 12(7Q31.2) WILD-TYPE     26     16     30
D12V8, multiclass
        clus
vv       AMP PEAK 12(7Q31.2) MUTATED AMP PEAK 12(7Q31.2) WILD-TYPE
  CLUS_1                          46                            37
  CLUS_2                          15                            42
  CLUS_3                          33                            11
  CLUS_4                          39                            45
  CLUS_5                           5                            41
  CLUS_6                          15                            36
  CLUS_7                          23                            26
  CLUS_8                           2                            16
  CLUS_9                          24                            30
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q31.2) MUTATED       55    109     39
  AMP PEAK 12(7Q31.2) WILD-TYPE    124    122     39
D12V9, multiclass
        clus
vv       AMP PEAK 12(7Q31.2) MUTATED AMP PEAK 12(7Q31.2) WILD-TYPE
  CLUS_1                          55                           124
  CLUS_2                         109                           122
  CLUS_3                          39                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 12(7Q31.2) MUTATED       18     15     65     53     36     16
  AMP PEAK 12(7Q31.2) WILD-TYPE     53     29     53     84     47     19
D12V10, multiclass
        clus
vv       AMP PEAK 12(7Q31.2) MUTATED AMP PEAK 12(7Q31.2) WILD-TYPE
  CLUS_1                          18                            53
  CLUS_2                          15                            29
  CLUS_3                          65                            53
  CLUS_4                          53                            84
  CLUS_5                          36                            47
  CLUS_6                          16                            19
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q31.2) MUTATED       49     92     34
  AMP PEAK 12(7Q31.2) WILD-TYPE    106    100     44
D12V11, multiclass
        clus
vv       AMP PEAK 12(7Q31.2) MUTATED AMP PEAK 12(7Q31.2) WILD-TYPE
  CLUS_1                          49                           106
  CLUS_2                          92                           100
  CLUS_3                          34                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q31.2) MUTATED       59    100     16
  AMP PEAK 12(7Q31.2) WILD-TYPE    127    109     14
D12V12, multiclass
        clus
vv       AMP PEAK 12(7Q31.2) MUTATED AMP PEAK 12(7Q31.2) WILD-TYPE
  CLUS_1                          59                           127
  CLUS_2                         100                           109
  CLUS_3                          16                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(13) Variable = AMP PEAK 13(8P11.23) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8P11.23) MUTATED        1      4      1      1
  AMP PEAK 13(8P11.23) WILD-TYPE      4      5     11      5
D13V1, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            4                              5
  CLUS_3                            1                             11
  CLUS_4                            1                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P11.23) MUTATED        1      5      1
  AMP PEAK 13(8P11.23) WILD-TYPE     13      6      6
D13V2, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                            1                             13
  CLUS_2                            5                              6
  CLUS_3                            1                              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P11.23) MUTATED       34     38     62
  AMP PEAK 13(8P11.23) WILD-TYPE    152    178     29
D13V3, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           34                            152
  CLUS_2                           38                            178
  CLUS_3                           62                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8P11.23) MUTATED       18     53     27     18
  AMP PEAK 13(8P11.23) WILD-TYPE     74     72     88     81
D13V4, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           18                             74
  CLUS_2                           53                             72
  CLUS_3                           27                             88
  CLUS_4                           18                             81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P11.23) MUTATED       23     19     30
  AMP PEAK 13(8P11.23) WILD-TYPE     71     49     43
D13V5, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           23                             71
  CLUS_2                           19                             49
  CLUS_3                           30                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P11.23) MUTATED       33     15     24
  AMP PEAK 13(8P11.23) WILD-TYPE     79     56     28
D13V6, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           33                             79
  CLUS_2                           15                             56
  CLUS_3                           24                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 13(8P11.23) MUTATED       28     16     25     49     12
  AMP PEAK 13(8P11.23) WILD-TYPE    110     96     51     57     42
D13V7, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           28                            110
  CLUS_2                           16                             96
  CLUS_3                           25                             51
  CLUS_4                           49                             57
  CLUS_5                           12                             42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 13(8P11.23) MUTATED       22      7     10     27     12     23
  AMP PEAK 13(8P11.23) WILD-TYPE     61     50     34     57     34     28
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 13(8P11.23) MUTATED       19      0     10
  AMP PEAK 13(8P11.23) WILD-TYPE     30     18     44
D13V8, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           22                             61
  CLUS_2                            7                             50
  CLUS_3                           10                             34
  CLUS_4                           27                             57
  CLUS_5                           12                             34
  CLUS_6                           23                             28
  CLUS_7                           19                             30
  CLUS_8                            0                             18
  CLUS_9                           10                             44
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P11.23) MUTATED       37     74     21
  AMP PEAK 13(8P11.23) WILD-TYPE    142    157     57
D13V9, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           37                            142
  CLUS_2                           74                            157
  CLUS_3                           21                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 13(8P11.23) MUTATED       16     14     31     30     35      6
  AMP PEAK 13(8P11.23) WILD-TYPE     55     30     87    107     48     29
D13V10, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           16                             55
  CLUS_2                           14                             30
  CLUS_3                           31                             87
  CLUS_4                           30                            107
  CLUS_5                           35                             48
  CLUS_6                            6                             29
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P11.23) MUTATED       35     62     19
  AMP PEAK 13(8P11.23) WILD-TYPE    120    130     59
D13V11, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           35                            120
  CLUS_2                           62                            130
  CLUS_3                           19                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P11.23) MUTATED       39     71      6
  AMP PEAK 13(8P11.23) WILD-TYPE    147    138     24
D13V12, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           39                            147
  CLUS_2                           71                            138
  CLUS_3                            6                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(14) Variable = AMP PEAK 14(8P11.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(8P11.21) MUTATED        1      4      1      2
  AMP PEAK 14(8P11.21) WILD-TYPE      4      5     11      4
D14V1, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            4                              5
  CLUS_3                            1                             11
  CLUS_4                            2                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.21) MUTATED        2      4      2
  AMP PEAK 14(8P11.21) WILD-TYPE     12      7      5
D14V2, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                            2                             12
  CLUS_2                            4                              7
  CLUS_3                            2                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.21) MUTATED       49     48     73
  AMP PEAK 14(8P11.21) WILD-TYPE    137    168     18
D14V3, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           49                            137
  CLUS_2                           48                            168
  CLUS_3                           73                             18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(8P11.21) MUTATED       21     61     39     28
  AMP PEAK 14(8P11.21) WILD-TYPE     71     64     76     71
D14V4, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           21                             71
  CLUS_2                           61                             64
  CLUS_3                           39                             76
  CLUS_4                           28                             71
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.21) MUTATED       29     19     36
  AMP PEAK 14(8P11.21) WILD-TYPE     65     49     37
D14V5, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           29                             65
  CLUS_2                           19                             49
  CLUS_3                           36                             37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.21) MUTATED       41     16     27
  AMP PEAK 14(8P11.21) WILD-TYPE     71     55     25
D14V6, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           41                             71
  CLUS_2                           16                             55
  CLUS_3                           27                             25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 14(8P11.21) MUTATED       44     19     25     63     14
  AMP PEAK 14(8P11.21) WILD-TYPE     94     93     51     43     40
D14V7, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           44                             94
  CLUS_2                           19                             93
  CLUS_3                           25                             51
  CLUS_4                           63                             43
  CLUS_5                           14                             40
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 14(8P11.21) MUTATED       26      9     20     35     15     30
  AMP PEAK 14(8P11.21) WILD-TYPE     57     48     24     49     31     21
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 14(8P11.21) MUTATED       18      0     12
  AMP PEAK 14(8P11.21) WILD-TYPE     31     18     42
D14V8, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           26                             57
  CLUS_2                            9                             48
  CLUS_3                           20                             24
  CLUS_4                           35                             49
  CLUS_5                           15                             31
  CLUS_6                           30                             21
  CLUS_7                           18                             31
  CLUS_8                            0                             18
  CLUS_9                           12                             42
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.21) MUTATED       44     98     27
  AMP PEAK 14(8P11.21) WILD-TYPE    135    133     51
D14V9, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           44                            135
  CLUS_2                           98                            133
  CLUS_3                           27                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 14(8P11.21) MUTATED       19     20     43     35     42     10
  AMP PEAK 14(8P11.21) WILD-TYPE     52     24     75    102     41     25
D14V10, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           19                             52
  CLUS_2                           20                             24
  CLUS_3                           43                             75
  CLUS_4                           35                            102
  CLUS_5                           42                             41
  CLUS_6                           10                             25
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.21) MUTATED       37     85     27
  AMP PEAK 14(8P11.21) WILD-TYPE    118    107     51
D14V11, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           37                            118
  CLUS_2                           85                            107
  CLUS_3                           27                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.21) MUTATED       45     95      9
  AMP PEAK 14(8P11.21) WILD-TYPE    141    114     21
D14V12, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           45                            141
  CLUS_2                           95                            114
  CLUS_3                            9                             21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(15) Variable = AMP PEAK 15(8Q11.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(8Q11.1) MUTATED        4      6      1      4
  AMP PEAK 15(8Q11.1) WILD-TYPE      1      3     11      2
D15V1, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                           4                             1
  CLUS_2                           6                             3
  CLUS_3                           1                            11
  CLUS_4                           4                             2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8Q11.1) MUTATED        3      7      5
  AMP PEAK 15(8Q11.1) WILD-TYPE     11      4      2
D15V2, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                           3                            11
  CLUS_2                           7                             4
  CLUS_3                           5                             2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8Q11.1) MUTATED       92     55     77
  AMP PEAK 15(8Q11.1) WILD-TYPE     94    161     14
D15V3, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                          92                            94
  CLUS_2                          55                           161
  CLUS_3                          77                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(8Q11.1) MUTATED       23     80     62     31
  AMP PEAK 15(8Q11.1) WILD-TYPE     69     45     53     68
D15V4, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                          23                            69
  CLUS_2                          80                            45
  CLUS_3                          62                            53
  CLUS_4                          31                            68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8Q11.1) MUTATED       42     25     43
  AMP PEAK 15(8Q11.1) WILD-TYPE     52     43     30
D15V5, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                          42                            52
  CLUS_2                          25                            43
  CLUS_3                          43                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8Q11.1) MUTATED       55     23     32
  AMP PEAK 15(8Q11.1) WILD-TYPE     57     48     20
D15V6, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                          55                            57
  CLUS_2                          23                            48
  CLUS_3                          32                            20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 15(8Q11.1) MUTATED       67     28     32     71     21
  AMP PEAK 15(8Q11.1) WILD-TYPE     71     84     44     35     33
D15V7, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                          67                            71
  CLUS_2                          28                            84
  CLUS_3                          32                            44
  CLUS_4                          71                            35
  CLUS_5                          21                            33
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 15(8Q11.1) MUTATED       35     16     26     42     18     37
  AMP PEAK 15(8Q11.1) WILD-TYPE     48     41     18     42     28     14
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 15(8Q11.1) MUTATED       24      0     21
  AMP PEAK 15(8Q11.1) WILD-TYPE     25     18     33
D15V8, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                          35                            48
  CLUS_2                          16                            41
  CLUS_3                          26                            18
  CLUS_4                          42                            42
  CLUS_5                          18                            28
  CLUS_6                          37                            14
  CLUS_7                          24                            25
  CLUS_8                           0                            18
  CLUS_9                          21                            33
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8Q11.1) MUTATED       55    130     37
  AMP PEAK 15(8Q11.1) WILD-TYPE    124    101     41
D15V9, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                          55                           124
  CLUS_2                         130                           101
  CLUS_3                          37                            41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 15(8Q11.1) MUTATED       28     24     64     44     46     16
  AMP PEAK 15(8Q11.1) WILD-TYPE     43     20     54     93     37     19
D15V10, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                          28                            43
  CLUS_2                          24                            20
  CLUS_3                          64                            54
  CLUS_4                          44                            93
  CLUS_5                          46                            37
  CLUS_6                          16                            19
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8Q11.1) MUTATED       48    108     38
  AMP PEAK 15(8Q11.1) WILD-TYPE    107     84     40
D15V11, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                          48                           107
  CLUS_2                         108                            84
  CLUS_3                          38                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8Q11.1) MUTATED       59    121     14
  AMP PEAK 15(8Q11.1) WILD-TYPE    127     88     16
D15V12, multiclass
        clus
vv       AMP PEAK 15(8Q11.1) MUTATED AMP PEAK 15(8Q11.1) WILD-TYPE
  CLUS_1                          59                           127
  CLUS_2                         121                            88
  CLUS_3                          14                            16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(16) Variable = AMP PEAK 16(8Q24.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(8Q24.21) MUTATED        4      8      4      5
  AMP PEAK 16(8Q24.21) WILD-TYPE      1      1      8      1
D16V1, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                            4                              1
  CLUS_2                            8                              1
  CLUS_3                            4                              8
  CLUS_4                            5                              1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8Q24.21) MUTATED        6      9      6
  AMP PEAK 16(8Q24.21) WILD-TYPE      8      2      1
D16V2, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                            6                              8
  CLUS_2                            9                              2
  CLUS_3                            6                              1
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8Q24.21) MUTATED      136     92     82
  AMP PEAK 16(8Q24.21) WILD-TYPE     50    124      9
D16V3, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                          136                             50
  CLUS_2                           92                            124
  CLUS_3                           82                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(8Q24.21) MUTATED       38     95     85     51
  AMP PEAK 16(8Q24.21) WILD-TYPE     54     30     30     48
D16V4, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           38                             54
  CLUS_2                           95                             30
  CLUS_3                           85                             30
  CLUS_4                           51                             48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8Q24.21) MUTATED       64     41     52
  AMP PEAK 16(8Q24.21) WILD-TYPE     30     27     21
D16V5, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           64                             30
  CLUS_2                           41                             27
  CLUS_3                           52                             21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8Q24.21) MUTATED       78     38     41
  AMP PEAK 16(8Q24.21) WILD-TYPE     34     33     11
D16V6, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           78                             34
  CLUS_2                           38                             33
  CLUS_3                           41                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 16(8Q24.21) MUTATED      103     49     39     86     26
  AMP PEAK 16(8Q24.21) WILD-TYPE     35     63     37     20     28
D16V7, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                          103                             35
  CLUS_2                           49                             63
  CLUS_3                           39                             37
  CLUS_4                           86                             20
  CLUS_5                           26                             28
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 16(8Q24.21) MUTATED       52     25     39     57     27     45
  AMP PEAK 16(8Q24.21) WILD-TYPE     31     32      5     27     19      6
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 16(8Q24.21) MUTATED       30      0     28
  AMP PEAK 16(8Q24.21) WILD-TYPE     19     18     26
D16V8, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           52                             31
  CLUS_2                           25                             32
  CLUS_3                           39                              5
  CLUS_4                           57                             27
  CLUS_5                           27                             19
  CLUS_6                           45                              6
  CLUS_7                           30                             19
  CLUS_8                            0                             18
  CLUS_9                           28                             26
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8Q24.21) MUTATED       88    168     51
  AMP PEAK 16(8Q24.21) WILD-TYPE     91     63     27
D16V9, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           88                             91
  CLUS_2                          168                             63
  CLUS_3                           51                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 16(8Q24.21) MUTATED       39     36     82     74     57     19
  AMP PEAK 16(8Q24.21) WILD-TYPE     32      8     36     63     26     16
D16V10, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           39                             32
  CLUS_2                           36                              8
  CLUS_3                           82                             36
  CLUS_4                           74                             63
  CLUS_5                           57                             26
  CLUS_6                           19                             16
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8Q24.21) MUTATED       81    137     47
  AMP PEAK 16(8Q24.21) WILD-TYPE     74     55     31
D16V11, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           81                             74
  CLUS_2                          137                             55
  CLUS_3                           47                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8Q24.21) MUTATED       94    155     16
  AMP PEAK 16(8Q24.21) WILD-TYPE     92     54     14
D16V12, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           94                             92
  CLUS_2                          155                             54
  CLUS_3                           16                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(17) Variable = AMP PEAK 17(10P15.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(10P15.1) MUTATED        0      2      0      3
  AMP PEAK 17(10P15.1) WILD-TYPE      5      7     12      3
D17V1, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                            0                              5
  CLUS_2                            2                              7
  CLUS_3                            0                             12
  CLUS_4                            3                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(10P15.1) MUTATED        0      2      3
  AMP PEAK 17(10P15.1) WILD-TYPE     14      9      4
D17V2, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                            0                             14
  CLUS_2                            2                              9
  CLUS_3                            3                              4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(10P15.1) MUTATED       60     37     39
  AMP PEAK 17(10P15.1) WILD-TYPE    126    179     52
D17V3, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                           60                            126
  CLUS_2                           37                            179
  CLUS_3                           39                             52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(10P15.1) MUTATED        5     51     41     20
  AMP PEAK 17(10P15.1) WILD-TYPE     87     74     74     79
D17V4, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                            5                             87
  CLUS_2                           51                             74
  CLUS_3                           41                             74
  CLUS_4                           20                             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(10P15.1) MUTATED       18     25     31
  AMP PEAK 17(10P15.1) WILD-TYPE     76     43     42
D17V5, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                           18                             76
  CLUS_2                           25                             43
  CLUS_3                           31                             42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(10P15.1) MUTATED       24     23     27
  AMP PEAK 17(10P15.1) WILD-TYPE     88     48     25
D17V6, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                           24                             88
  CLUS_2                           23                             48
  CLUS_3                           27                             25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 17(10P15.1) MUTATED       37     17     27     45      8
  AMP PEAK 17(10P15.1) WILD-TYPE    101     95     49     61     46
D17V7, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                           37                            101
  CLUS_2                           17                             95
  CLUS_3                           27                             49
  CLUS_4                           45                             61
  CLUS_5                            8                             46
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 17(10P15.1) MUTATED       22      4     13     22     14     23
  AMP PEAK 17(10P15.1) WILD-TYPE     61     53     31     62     32     28
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 17(10P15.1) MUTATED       25      0     11
  AMP PEAK 17(10P15.1) WILD-TYPE     24     18     43
D17V8, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                           22                             61
  CLUS_2                            4                             53
  CLUS_3                           13                             31
  CLUS_4                           22                             62
  CLUS_5                           14                             32
  CLUS_6                           23                             28
  CLUS_7                           25                             24
  CLUS_8                            0                             18
  CLUS_9                           11                             43
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(10P15.1) MUTATED       32     81     20
  AMP PEAK 17(10P15.1) WILD-TYPE    147    150     58
D17V9, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                           32                            147
  CLUS_2                           81                            150
  CLUS_3                           20                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 17(10P15.1) MUTATED       17     17     44     21     30      4
  AMP PEAK 17(10P15.1) WILD-TYPE     54     27     74    116     53     31
D17V10, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                           17                             54
  CLUS_2                           17                             27
  CLUS_3                           44                             74
  CLUS_4                           21                            116
  CLUS_5                           30                             53
  CLUS_6                            4                             31
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(10P15.1) MUTATED       33     67     17
  AMP PEAK 17(10P15.1) WILD-TYPE    122    125     61
D17V11, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                           33                            122
  CLUS_2                           67                            125
  CLUS_3                           17                             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(10P15.1) MUTATED       37     77      3
  AMP PEAK 17(10P15.1) WILD-TYPE    149    132     27
D17V12, multiclass
        clus
vv       AMP PEAK 17(10P15.1) MUTATED AMP PEAK 17(10P15.1) WILD-TYPE
  CLUS_1                           37                            149
  CLUS_2                           77                            132
  CLUS_3                            3                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(18) Variable = AMP PEAK 18(11Q13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(11Q13.3) MUTATED        2      4      2      6
  AMP PEAK 18(11Q13.3) WILD-TYPE      3      5     10      0
D18V1, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                            2                              3
  CLUS_2                            4                              5
  CLUS_3                            2                             10
  CLUS_4                            6                              0
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11Q13.3) MUTATED        4      3      7
  AMP PEAK 18(11Q13.3) WILD-TYPE     10      8      0
D18V2, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                            4                             10
  CLUS_2                            3                              8
  CLUS_3                            7                              0
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11Q13.3) MUTATED       90     30     45
  AMP PEAK 18(11Q13.3) WILD-TYPE     96    186     46
D18V3, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           90                             96
  CLUS_2                           30                            186
  CLUS_3                           45                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(11Q13.3) MUTATED       14     55     49     25
  AMP PEAK 18(11Q13.3) WILD-TYPE     78     70     66     74
D18V4, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           14                             78
  CLUS_2                           55                             70
  CLUS_3                           49                             66
  CLUS_4                           25                             74
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11Q13.3) MUTATED       34     17     32
  AMP PEAK 18(11Q13.3) WILD-TYPE     60     51     41
D18V5, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           34                             60
  CLUS_2                           17                             51
  CLUS_3                           32                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11Q13.3) MUTATED       37     18     28
  AMP PEAK 18(11Q13.3) WILD-TYPE     75     53     24
D18V6, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           37                             75
  CLUS_2                           18                             53
  CLUS_3                           28                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 18(11Q13.3) MUTATED       58     21     17     56     12
  AMP PEAK 18(11Q13.3) WILD-TYPE     80     91     59     50     42
D18V7, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           58                             80
  CLUS_2                           21                             91
  CLUS_3                           17                             59
  CLUS_4                           56                             50
  CLUS_5                           12                             42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 18(11Q13.3) MUTATED       31     15     18     33      4     34
  AMP PEAK 18(11Q13.3) WILD-TYPE     52     42     26     51     42     17
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 18(11Q13.3) MUTATED       15      2     12
  AMP PEAK 18(11Q13.3) WILD-TYPE     34     16     42
D18V8, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           31                             52
  CLUS_2                           15                             42
  CLUS_3                           18                             26
  CLUS_4                           33                             51
  CLUS_5                            4                             42
  CLUS_6                           34                             17
  CLUS_7                           15                             34
  CLUS_8                            2                             16
  CLUS_9                           12                             42
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11Q13.3) MUTATED       31    105     26
  AMP PEAK 18(11Q13.3) WILD-TYPE    148    126     52
D18V9, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           31                            148
  CLUS_2                          105                            126
  CLUS_3                           26                             52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 18(11Q13.3) MUTATED       11     23     44     35     40      9
  AMP PEAK 18(11Q13.3) WILD-TYPE     60     21     74    102     43     26
D18V10, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           11                             60
  CLUS_2                           23                             21
  CLUS_3                           44                             74
  CLUS_4                           35                            102
  CLUS_5                           40                             43
  CLUS_6                            9                             26
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11Q13.3) MUTATED       29     83     28
  AMP PEAK 18(11Q13.3) WILD-TYPE    126    109     50
D18V11, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           29                            126
  CLUS_2                           83                            109
  CLUS_3                           28                             50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11Q13.3) MUTATED       35     94     11
  AMP PEAK 18(11Q13.3) WILD-TYPE    151    115     19
D18V12, multiclass
        clus
vv       AMP PEAK 18(11Q13.3) MUTATED AMP PEAK 18(11Q13.3) WILD-TYPE
  CLUS_1                           35                            151
  CLUS_2                           94                            115
  CLUS_3                           11                             19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(19) Variable = AMP PEAK 19(12P12.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(12P12.1) MUTATED        1      3      2      4
  AMP PEAK 19(12P12.1) WILD-TYPE      4      6     10      2
D19V1, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            3                              6
  CLUS_3                            2                             10
  CLUS_4                            4                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(12P12.1) MUTATED        2      3      5
  AMP PEAK 19(12P12.1) WILD-TYPE     12      8      2
D19V2, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                            2                             12
  CLUS_2                            3                              8
  CLUS_3                            5                              2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(12P12.1) MUTATED       70     54     50
  AMP PEAK 19(12P12.1) WILD-TYPE    116    162     41
D19V3, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           70                            116
  CLUS_2                           54                            162
  CLUS_3                           50                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(12P12.1) MUTATED       10     57     44     37
  AMP PEAK 19(12P12.1) WILD-TYPE     82     68     71     62
D19V4, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           10                             82
  CLUS_2                           57                             68
  CLUS_3                           44                             71
  CLUS_4                           37                             62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(12P12.1) MUTATED       31     17     33
  AMP PEAK 19(12P12.1) WILD-TYPE     63     51     40
D19V5, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           31                             63
  CLUS_2                           17                             51
  CLUS_3                           33                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(12P12.1) MUTATED       43     16     22
  AMP PEAK 19(12P12.1) WILD-TYPE     69     55     30
D19V6, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           43                             69
  CLUS_2                           16                             55
  CLUS_3                           22                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 19(12P12.1) MUTATED       55     10     38     53     16
  AMP PEAK 19(12P12.1) WILD-TYPE     83    102     38     53     38
D19V7, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           55                             83
  CLUS_2                           10                            102
  CLUS_3                           38                             38
  CLUS_4                           53                             53
  CLUS_5                           16                             38
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 19(12P12.1) MUTATED       28      7     21     31      5     32
  AMP PEAK 19(12P12.1) WILD-TYPE     55     50     23     53     41     19
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 19(12P12.1) MUTATED       28      5     15
  AMP PEAK 19(12P12.1) WILD-TYPE     21     13     39
D19V8, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           28                             55
  CLUS_2                            7                             50
  CLUS_3                           21                             23
  CLUS_4                           31                             53
  CLUS_5                            5                             41
  CLUS_6                           32                             19
  CLUS_7                           28                             21
  CLUS_8                            5                             13
  CLUS_9                           15                             39
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(12P12.1) MUTATED       42    106     23
  AMP PEAK 19(12P12.1) WILD-TYPE    137    125     55
D19V9, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           42                            137
  CLUS_2                          106                            125
  CLUS_3                           23                             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 19(12P12.1) MUTATED       12     26     47     38     39      9
  AMP PEAK 19(12P12.1) WILD-TYPE     59     18     71     99     44     26
D19V10, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           12                             59
  CLUS_2                           26                             18
  CLUS_3                           47                             71
  CLUS_4                           38                             99
  CLUS_5                           39                             44
  CLUS_6                            9                             26
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(12P12.1) MUTATED       31     88     28
  AMP PEAK 19(12P12.1) WILD-TYPE    124    104     50
D19V11, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           31                            124
  CLUS_2                           88                            104
  CLUS_3                           28                             50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(12P12.1) MUTATED       40     99      8
  AMP PEAK 19(12P12.1) WILD-TYPE    146    110     22
D19V12, multiclass
        clus
vv       AMP PEAK 19(12P12.1) MUTATED AMP PEAK 19(12P12.1) WILD-TYPE
  CLUS_1                           40                            146
  CLUS_2                           99                            110
  CLUS_3                            8                             22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(20) Variable = AMP PEAK 20(12Q14.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(12Q14.1) MUTATED        1      4      2      3
  AMP PEAK 20(12Q14.1) WILD-TYPE      4      5     10      3
D20V1, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            4                              5
  CLUS_3                            2                             10
  CLUS_4                            3                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(12Q14.1) MUTATED        3      3      4
  AMP PEAK 20(12Q14.1) WILD-TYPE     11      8      3
D20V2, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                            3                             11
  CLUS_2                            3                              8
  CLUS_3                            4                              3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(12Q14.1) MUTATED       60     49     52
  AMP PEAK 20(12Q14.1) WILD-TYPE    126    167     39
D20V3, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                           60                            126
  CLUS_2                           49                            167
  CLUS_3                           52                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(12Q14.1) MUTATED       10     62     34     34
  AMP PEAK 20(12Q14.1) WILD-TYPE     82     63     81     65
D20V4, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                           10                             82
  CLUS_2                           62                             63
  CLUS_3                           34                             81
  CLUS_4                           34                             65
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(12Q14.1) MUTATED       27     19     34
  AMP PEAK 20(12Q14.1) WILD-TYPE     67     49     39
D20V5, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                           27                             67
  CLUS_2                           19                             49
  CLUS_3                           34                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(12Q14.1) MUTATED       36     17     27
  AMP PEAK 20(12Q14.1) WILD-TYPE     76     54     25
D20V6, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                           36                             76
  CLUS_2                           17                             54
  CLUS_3                           27                             25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 20(12Q14.1) MUTATED       42     13     34     58     12
  AMP PEAK 20(12Q14.1) WILD-TYPE     96     99     42     48     42
D20V7, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                           42                             96
  CLUS_2                           13                             99
  CLUS_3                           34                             42
  CLUS_4                           58                             48
  CLUS_5                           12                             42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 20(12Q14.1) MUTATED       18     11     18     28      6     36
  AMP PEAK 20(12Q14.1) WILD-TYPE     65     46     26     56     40     15
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 20(12Q14.1) MUTATED       30      2     10
  AMP PEAK 20(12Q14.1) WILD-TYPE     19     16     44
D20V8, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                           18                             65
  CLUS_2                           11                             46
  CLUS_3                           18                             26
  CLUS_4                           28                             56
  CLUS_5                            6                             40
  CLUS_6                           36                             15
  CLUS_7                           30                             19
  CLUS_8                            2                             16
  CLUS_9                           10                             44
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(12Q14.1) MUTATED       33    105     21
  AMP PEAK 20(12Q14.1) WILD-TYPE    146    126     57
D20V9, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                           33                            146
  CLUS_2                          105                            126
  CLUS_3                           21                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 20(12Q14.1) MUTATED       12     28     43     25     41     10
  AMP PEAK 20(12Q14.1) WILD-TYPE     59     16     75    112     42     25
D20V10, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                           12                             59
  CLUS_2                           28                             16
  CLUS_3                           43                             75
  CLUS_4                           25                            112
  CLUS_5                           41                             42
  CLUS_6                           10                             25
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(12Q14.1) MUTATED       24     83     30
  AMP PEAK 20(12Q14.1) WILD-TYPE    131    109     48
D20V11, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                           24                            131
  CLUS_2                           83                            109
  CLUS_3                           30                             48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(12Q14.1) MUTATED       29     98     10
  AMP PEAK 20(12Q14.1) WILD-TYPE    157    111     20
D20V12, multiclass
        clus
vv       AMP PEAK 20(12Q14.1) MUTATED AMP PEAK 20(12Q14.1) WILD-TYPE
  CLUS_1                           29                            157
  CLUS_2                           98                            111
  CLUS_3                           10                             20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(21) Variable = AMP PEAK 21(12Q15) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(12Q15) MUTATED        1      3      1      3
  AMP PEAK 21(12Q15) WILD-TYPE      4      6     11      3
D21V1, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                          1                            4
  CLUS_2                          3                            6
  CLUS_3                          1                           11
  CLUS_4                          3                            3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12Q15) MUTATED        2      2      4
  AMP PEAK 21(12Q15) WILD-TYPE     12      9      3
D21V2, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                          2                           12
  CLUS_2                          2                            9
  CLUS_3                          4                            3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12Q15) MUTATED       59     52     51
  AMP PEAK 21(12Q15) WILD-TYPE    127    164     40
D21V3, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         59                          127
  CLUS_2                         52                          164
  CLUS_3                         51                           40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(12Q15) MUTATED       11     63     36     31
  AMP PEAK 21(12Q15) WILD-TYPE     81     62     79     68
D21V4, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         11                           81
  CLUS_2                         63                           62
  CLUS_3                         36                           79
  CLUS_4                         31                           68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12Q15) MUTATED       31     17     33
  AMP PEAK 21(12Q15) WILD-TYPE     63     51     40
D21V5, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         31                           63
  CLUS_2                         17                           51
  CLUS_3                         33                           40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12Q15) MUTATED       40     15     26
  AMP PEAK 21(12Q15) WILD-TYPE     72     56     26
D21V6, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         40                           72
  CLUS_2                         15                           56
  CLUS_3                         26                           26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 21(12Q15) MUTATED       41     13     35     58     12
  AMP PEAK 21(12Q15) WILD-TYPE     97     99     41     48     42
D21V7, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         41                           97
  CLUS_2                         13                           99
  CLUS_3                         35                           41
  CLUS_4                         58                           48
  CLUS_5                         12                           42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 21(12Q15) MUTATED       18     11     17     28      6     36     29
  AMP PEAK 21(12Q15) WILD-TYPE     65     46     27     56     40     15     20
                              vv
clus                           CLUS_8 CLUS_9
  AMP PEAK 21(12Q15) MUTATED        4     10
  AMP PEAK 21(12Q15) WILD-TYPE     14     44
D21V8, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         18                           65
  CLUS_2                         11                           46
  CLUS_3                         17                           27
  CLUS_4                         28                           56
  CLUS_5                          6                           40
  CLUS_6                         36                           15
  CLUS_7                         29                           20
  CLUS_8                          4                           14
  CLUS_9                         10                           44
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12Q15) MUTATED       33    106     22
  AMP PEAK 21(12Q15) WILD-TYPE    146    125     56
D21V9, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         33                          146
  CLUS_2                        106                          125
  CLUS_3                         22                           56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 21(12Q15) MUTATED       10     29     38     28     44     12
  AMP PEAK 21(12Q15) WILD-TYPE     61     15     80    109     39     23
D21V10, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         10                           61
  CLUS_2                         29                           15
  CLUS_3                         38                           80
  CLUS_4                         28                          109
  CLUS_5                         44                           39
  CLUS_6                         12                           23
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12Q15) MUTATED       24     84     31
  AMP PEAK 21(12Q15) WILD-TYPE    131    108     47
D21V11, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         24                          131
  CLUS_2                         84                          108
  CLUS_3                         31                           47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12Q15) MUTATED       30     97     12
  AMP PEAK 21(12Q15) WILD-TYPE    156    112     18
D21V12, multiclass
        clus
vv       AMP PEAK 21(12Q15) MUTATED AMP PEAK 21(12Q15) WILD-TYPE
  CLUS_1                         30                          156
  CLUS_2                         97                          112
  CLUS_3                         12                           18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(22) Variable = AMP PEAK 22(13Q33.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(13Q33.3) MUTATED        0      1      4      1
  AMP PEAK 22(13Q33.3) WILD-TYPE      5      8      8      5
D22V1, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                            0                              5
  CLUS_2                            1                              8
  CLUS_3                            4                              8
  CLUS_4                            1                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(13Q33.3) MUTATED        4      1      1
  AMP PEAK 22(13Q33.3) WILD-TYPE     10     10      6
D22V2, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                            4                             10
  CLUS_2                            1                             10
  CLUS_3                            1                              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(13Q33.3) MUTATED       36     25     16
  AMP PEAK 22(13Q33.3) WILD-TYPE    150    191     75
D22V3, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                           36                            150
  CLUS_2                           25                            191
  CLUS_3                           16                             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(13Q33.3) MUTATED       13     34     11      8
  AMP PEAK 22(13Q33.3) WILD-TYPE     79     91    104     91
D22V4, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                           13                             79
  CLUS_2                           34                             91
  CLUS_3                           11                            104
  CLUS_4                            8                             91
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(13Q33.3) MUTATED       13     11     13
  AMP PEAK 22(13Q33.3) WILD-TYPE     81     57     60
D22V5, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                           13                             81
  CLUS_2                           11                             57
  CLUS_3                           13                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(13Q33.3) MUTATED       19      8     10
  AMP PEAK 22(13Q33.3) WILD-TYPE     93     63     42
D22V6, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                           19                             93
  CLUS_2                            8                             63
  CLUS_3                           10                             42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 22(13Q33.3) MUTATED       22     17     13     19      4
  AMP PEAK 22(13Q33.3) WILD-TYPE    116     95     63     87     50
D22V7, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                           22                            116
  CLUS_2                           17                             95
  CLUS_3                           13                             63
  CLUS_4                           19                             87
  CLUS_5                            4                             50
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 22(13Q33.3) MUTATED        8     10      4     24      8      7
  AMP PEAK 22(13Q33.3) WILD-TYPE     75     47     40     60     38     44
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 22(13Q33.3) MUTATED        8      0      6
  AMP PEAK 22(13Q33.3) WILD-TYPE     41     18     48
D22V8, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                            8                             75
  CLUS_2                           10                             47
  CLUS_3                            4                             40
  CLUS_4                           24                             60
  CLUS_5                            8                             38
  CLUS_6                            7                             44
  CLUS_7                            8                             41
  CLUS_8                            0                             18
  CLUS_9                            6                             48
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(13Q33.3) MUTATED       23     44      9
  AMP PEAK 22(13Q33.3) WILD-TYPE    156    187     69
D22V9, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                           23                            156
  CLUS_2                           44                            187
  CLUS_3                            9                             69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 22(13Q33.3) MUTATED       11      6     19     15     20      5
  AMP PEAK 22(13Q33.3) WILD-TYPE     60     38     99    122     63     30
D22V10, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                           11                             60
  CLUS_2                            6                             38
  CLUS_3                           19                             99
  CLUS_4                           15                            122
  CLUS_5                           20                             63
  CLUS_6                            5                             30
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(13Q33.3) MUTATED       20     36     10
  AMP PEAK 22(13Q33.3) WILD-TYPE    135    156     68
D22V11, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                           20                            135
  CLUS_2                           36                            156
  CLUS_3                           10                             68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(13Q33.3) MUTATED       20     40      6
  AMP PEAK 22(13Q33.3) WILD-TYPE    166    169     24
D22V12, multiclass
        clus
vv       AMP PEAK 22(13Q33.3) MUTATED AMP PEAK 22(13Q33.3) WILD-TYPE
  CLUS_1                           20                            166
  CLUS_2                           40                            169
  CLUS_3                            6                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(23) Variable = AMP PEAK 23(14Q13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(14Q13.3) MUTATED        3      4      5      4
  AMP PEAK 23(14Q13.3) WILD-TYPE      2      5      7      2
D23V1, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                            3                              2
  CLUS_2                            4                              5
  CLUS_3                            5                              7
  CLUS_4                            4                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(14Q13.3) MUTATED        6      5      5
  AMP PEAK 23(14Q13.3) WILD-TYPE      8      6      2
D23V2, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                            6                              8
  CLUS_2                            5                              6
  CLUS_3                            5                              2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(14Q13.3) MUTATED      101     57     64
  AMP PEAK 23(14Q13.3) WILD-TYPE     85    159     27
D23V3, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                          101                             85
  CLUS_2                           57                            159
  CLUS_3                           64                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(14Q13.3) MUTATED       28     77     56     33
  AMP PEAK 23(14Q13.3) WILD-TYPE     64     48     59     66
D23V4, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                           28                             64
  CLUS_2                           77                             48
  CLUS_3                           56                             59
  CLUS_4                           33                             66
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(14Q13.3) MUTATED       38     24     41
  AMP PEAK 23(14Q13.3) WILD-TYPE     56     44     32
D23V5, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                           38                             56
  CLUS_2                           24                             44
  CLUS_3                           41                             32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(14Q13.3) MUTATED       47     25     31
  AMP PEAK 23(14Q13.3) WILD-TYPE     65     46     21
D23V6, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                           47                             65
  CLUS_2                           25                             46
  CLUS_3                           31                             21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 23(14Q13.3) MUTATED       81     39     10     74     15
  AMP PEAK 23(14Q13.3) WILD-TYPE     57     73     66     32     39
D23V7, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                           81                             57
  CLUS_2                           39                             73
  CLUS_3                           10                             66
  CLUS_4                           74                             32
  CLUS_5                           15                             39
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 23(14Q13.3) MUTATED       47     25     21     55      9     40
  AMP PEAK 23(14Q13.3) WILD-TYPE     36     32     23     29     37     11
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 23(14Q13.3) MUTATED        8      0     14
  AMP PEAK 23(14Q13.3) WILD-TYPE     41     18     40
D23V8, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                           47                             36
  CLUS_2                           25                             32
  CLUS_3                           21                             23
  CLUS_4                           55                             29
  CLUS_5                            9                             37
  CLUS_6                           40                             11
  CLUS_7                            8                             41
  CLUS_8                            0                             18
  CLUS_9                           14                             40
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(14Q13.3) MUTATED       50    131     38
  AMP PEAK 23(14Q13.3) WILD-TYPE    129    100     40
D23V9, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                           50                            129
  CLUS_2                          131                            100
  CLUS_3                           38                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 23(14Q13.3) MUTATED       29     36     55     35     46     18
  AMP PEAK 23(14Q13.3) WILD-TYPE     42      8     63    102     37     17
D23V10, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                           29                             42
  CLUS_2                           36                              8
  CLUS_3                           55                             63
  CLUS_4                           35                            102
  CLUS_5                           46                             37
  CLUS_6                           18                             17
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(14Q13.3) MUTATED       48    100     42
  AMP PEAK 23(14Q13.3) WILD-TYPE    107     92     36
D23V11, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                           48                            107
  CLUS_2                          100                             92
  CLUS_3                           42                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(14Q13.3) MUTATED       57    116     17
  AMP PEAK 23(14Q13.3) WILD-TYPE    129     93     13
D23V12, multiclass
        clus
vv       AMP PEAK 23(14Q13.3) MUTATED AMP PEAK 23(14Q13.3) WILD-TYPE
  CLUS_1                           57                            129
  CLUS_2                          116                             93
  CLUS_3                           17                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(24) Variable = AMP PEAK 24(16P11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(16P11.2) MUTATED        3      5      5      2
  AMP PEAK 24(16P11.2) WILD-TYPE      2      4      7      4
D24V1, multiclass
        clus
vv       AMP PEAK 24(16P11.2) MUTATED AMP PEAK 24(16P11.2) WILD-TYPE
  CLUS_1                            3                              2
  CLUS_2                            5                              4
  CLUS_3                            5                              7
  CLUS_4                            2                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(16P11.2) MUTATED        6      7      2
  AMP PEAK 24(16P11.2) WILD-TYPE      8      4      5
D24V2, multiclass
        clus
vv       AMP PEAK 24(16P11.2) MUTATED AMP PEAK 24(16P11.2) WILD-TYPE
  CLUS_1                            6                              8
  CLUS_2                            7                              4
  CLUS_3                            2                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(16P11.2) MUTATED       84     45     30
  AMP PEAK 24(16P11.2) WILD-TYPE    102    171     61
D24V3, multiclass
        clus
vv       AMP PEAK 24(16P11.2) MUTATED AMP PEAK 24(16P11.2) WILD-TYPE
  CLUS_1                           84                            102
  CLUS_2                           45                            171
  CLUS_3                           30                             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(16P11.2) MUTATED       30     47     39     20
  AMP PEAK 24(16P11.2) WILD-TYPE     62     78     76     79
D24V4, multiclass
        clus
vv       AMP PEAK 24(16P11.2) MUTATED AMP PEAK 24(16P11.2) WILD-TYPE
  CLUS_1                           30                             62
  CLUS_2                           47                             78
  CLUS_3                           39                             76
  CLUS_4                           20                             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(16P11.2) MUTATED       35     17     26
  AMP PEAK 24(16P11.2) WILD-TYPE     59     51     47
D24V5, multiclass
        clus
vv       AMP PEAK 24(16P11.2) MUTATED AMP PEAK 24(16P11.2) WILD-TYPE
  CLUS_1                           35                             59
  CLUS_2                           17                             51
  CLUS_3                           26                             47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(16P11.2) MUTATED       43     15     20
  AMP PEAK 24(16P11.2) WILD-TYPE     69     56     32
D24V6, multiclass
        clus
vv       AMP PEAK 24(16P11.2) MUTATED AMP PEAK 24(16P11.2) WILD-TYPE
  CLUS_1                           43                             69
  CLUS_2                           15                             56
  CLUS_3                           20                             32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 24(16P11.2) MUTATED       52     34     19     32     20
  AMP PEAK 24(16P11.2) WILD-TYPE     86     78     57     74     34
D24V7, multiclass
        clus
vv       AMP PEAK 24(16P11.2) MUTATED AMP PEAK 24(16P11.2) WILD-TYPE
  CLUS_1                           52                             86
  CLUS_2                           34                             78
  CLUS_3                           19                             57
  CLUS_4                           32                             74
  CLUS_5                           20                             34
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 24(16P11.2) MUTATED       29     25     17     31      9     17
  AMP PEAK 24(16P11.2) WILD-TYPE     54     32     27     53     37     34
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 24(16P11.2) MUTATED       11      2     16
  AMP PEAK 24(16P11.2) WILD-TYPE     38     16     38
D24V8, multiclass
        clus
vv       AMP PEAK 24(16P11.2) MUTATED AMP PEAK 24(16P11.2) WILD-TYPE
  CLUS_1                           29                             54
  CLUS_2                           25                             32
  CLUS_3                           17                             27
  CLUS_4                           31                             53
  CLUS_5                            9                             37
  CLUS_6                           17                             34
  CLUS_7                           11                             38
  CLUS_8                            2                             16
  CLUS_9                           16                             38
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(16P11.2) MUTATED       45     81     32
  AMP PEAK 24(16P11.2) WILD-TYPE    134    150     46
D24V9, multiclass
        clus
vv       AMP PEAK 24(16P11.2) MUTATED AMP PEAK 24(16P11.2) WILD-TYPE
  CLUS_1                           45                            134
  CLUS_2                           81                            150
  CLUS_3                           32                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 24(16P11.2) MUTATED       17     19     35     44     26     17
  AMP PEAK 24(16P11.2) WILD-TYPE     54     25     83     93     57     18
D24V10, multiclass
        clus
vv       AMP PEAK 24(16P11.2) MUTATED AMP PEAK 24(16P11.2) WILD-TYPE
  CLUS_1                           17                             54
  CLUS_2                           19                             25
  CLUS_3                           35                             83
  CLUS_4                           44                             93
  CLUS_5                           26                             57
  CLUS_6                           17                             18
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(16P11.2) MUTATED       44     62     28
  AMP PEAK 24(16P11.2) WILD-TYPE    111    130     50
D24V11, multiclass
        clus
vv       AMP PEAK 24(16P11.2) MUTATED AMP PEAK 24(16P11.2) WILD-TYPE
  CLUS_1                           44                            111
  CLUS_2                           62                            130
  CLUS_3                           28                             50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(16P11.2) MUTATED       50     69     15
  AMP PEAK 24(16P11.2) WILD-TYPE    136    140     15
D24V12, multiclass
        clus
vv       AMP PEAK 24(16P11.2) MUTATED AMP PEAK 24(16P11.2) WILD-TYPE
  CLUS_1                           50                            136
  CLUS_2                           69                            140
  CLUS_3                           15                             15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(25) Variable = AMP PEAK 25(17Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(17Q12) MUTATED        3      6      3      5
  AMP PEAK 25(17Q12) WILD-TYPE      2      3      9      1
D25V1, multiclass
        clus
vv       AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE
  CLUS_1                          3                            2
  CLUS_2                          6                            3
  CLUS_3                          3                            9
  CLUS_4                          5                            1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(17Q12) MUTATED        4      7      6
  AMP PEAK 25(17Q12) WILD-TYPE     10      4      1
D25V2, multiclass
        clus
vv       AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE
  CLUS_1                          4                           10
  CLUS_2                          7                            4
  CLUS_3                          6                            1
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(17Q12) MUTATED      111     56     52
  AMP PEAK 25(17Q12) WILD-TYPE     75    160     39
D25V3, multiclass
        clus
vv       AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE
  CLUS_1                        111                           75
  CLUS_2                         56                          160
  CLUS_3                         52                           39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(17Q12) MUTATED       20     68     63     33
  AMP PEAK 25(17Q12) WILD-TYPE     72     57     52     66
D25V4, multiclass
        clus
vv       AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE
  CLUS_1                         20                           72
  CLUS_2                         68                           57
  CLUS_3                         63                           52
  CLUS_4                         33                           66
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(17Q12) MUTATED       46     27     36
  AMP PEAK 25(17Q12) WILD-TYPE     48     41     37
D25V5, multiclass
        clus
vv       AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE
  CLUS_1                         46                           48
  CLUS_2                         27                           41
  CLUS_3                         36                           37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(17Q12) MUTATED       63     20     26
  AMP PEAK 25(17Q12) WILD-TYPE     49     51     26
D25V6, multiclass
        clus
vv       AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE
  CLUS_1                         63                           49
  CLUS_2                         20                           51
  CLUS_3                         26                           26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 25(17Q12) MUTATED       84     30     24     57     20
  AMP PEAK 25(17Q12) WILD-TYPE     54     82     52     49     34
D25V7, multiclass
        clus
vv       AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE
  CLUS_1                         84                           54
  CLUS_2                         30                           82
  CLUS_3                         24                           52
  CLUS_4                         57                           49
  CLUS_5                         20                           34
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 25(17Q12) MUTATED       43     20     26     51      8     28     19
  AMP PEAK 25(17Q12) WILD-TYPE     40     37     18     33     38     23     30
                              vv
clus                           CLUS_8 CLUS_9
  AMP PEAK 25(17Q12) MUTATED        1     19
  AMP PEAK 25(17Q12) WILD-TYPE     17     35
D25V8, multiclass
        clus
vv       AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE
  CLUS_1                         43                           40
  CLUS_2                         20                           37
  CLUS_3                         26                           18
  CLUS_4                         51                           33
  CLUS_5                          8                           38
  CLUS_6                         28                           23
  CLUS_7                         19                           30
  CLUS_8                          1                           17
  CLUS_9                         19                           35
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(17Q12) MUTATED       54    134     29
  AMP PEAK 25(17Q12) WILD-TYPE    125     97     49
D25V9, multiclass
        clus
vv       AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE
  CLUS_1                         54                          125
  CLUS_2                        134                           97
  CLUS_3                         29                           49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 25(17Q12) MUTATED       21     26     62     43     52     13
  AMP PEAK 25(17Q12) WILD-TYPE     50     18     56     94     31     22
D25V10, multiclass
        clus
vv       AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE
  CLUS_1                         21                           50
  CLUS_2                         26                           18
  CLUS_3                         62                           56
  CLUS_4                         43                           94
  CLUS_5                         52                           31
  CLUS_6                         13                           22
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(17Q12) MUTATED       50     98     35
  AMP PEAK 25(17Q12) WILD-TYPE    105     94     43
D25V11, multiclass
        clus
vv       AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE
  CLUS_1                         50                          105
  CLUS_2                         98                           94
  CLUS_3                         35                           43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(17Q12) MUTATED       55    117     11
  AMP PEAK 25(17Q12) WILD-TYPE    131     92     19
D25V12, multiclass
        clus
vv       AMP PEAK 25(17Q12) MUTATED AMP PEAK 25(17Q12) WILD-TYPE
  CLUS_1                         55                          131
  CLUS_2                        117                           92
  CLUS_3                         11                           19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(26) Variable = AMP PEAK 26(17Q23.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(17Q23.1) MUTATED        3      8      4      4
  AMP PEAK 26(17Q23.1) WILD-TYPE      2      1      8      2
D26V1, multiclass
        clus
vv       AMP PEAK 26(17Q23.1) MUTATED AMP PEAK 26(17Q23.1) WILD-TYPE
  CLUS_1                            3                              2
  CLUS_2                            8                              1
  CLUS_3                            4                              8
  CLUS_4                            4                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17Q23.1) MUTATED        6      8      5
  AMP PEAK 26(17Q23.1) WILD-TYPE      8      3      2
D26V2, multiclass
        clus
vv       AMP PEAK 26(17Q23.1) MUTATED AMP PEAK 26(17Q23.1) WILD-TYPE
  CLUS_1                            6                              8
  CLUS_2                            8                              3
  CLUS_3                            5                              2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17Q23.1) MUTATED      123     65     53
  AMP PEAK 26(17Q23.1) WILD-TYPE     63    151     38
D26V3, multiclass
        clus
vv       AMP PEAK 26(17Q23.1) MUTATED AMP PEAK 26(17Q23.1) WILD-TYPE
  CLUS_1                          123                             63
  CLUS_2                           65                            151
  CLUS_3                           53                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(17Q23.1) MUTATED       21     68     77     39
  AMP PEAK 26(17Q23.1) WILD-TYPE     71     57     38     60
D26V4, multiclass
        clus
vv       AMP PEAK 26(17Q23.1) MUTATED AMP PEAK 26(17Q23.1) WILD-TYPE
  CLUS_1                           21                             71
  CLUS_2                           68                             57
  CLUS_3                           77                             38
  CLUS_4                           39                             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17Q23.1) MUTATED       50     26     40
  AMP PEAK 26(17Q23.1) WILD-TYPE     44     42     33
D26V5, multiclass
        clus
vv       AMP PEAK 26(17Q23.1) MUTATED AMP PEAK 26(17Q23.1) WILD-TYPE
  CLUS_1                           50                             44
  CLUS_2                           26                             42
  CLUS_3                           40                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17Q23.1) MUTATED       67     20     29
  AMP PEAK 26(17Q23.1) WILD-TYPE     45     51     23
D26V6, multiclass
        clus
vv       AMP PEAK 26(17Q23.1) MUTATED AMP PEAK 26(17Q23.1) WILD-TYPE
  CLUS_1                           67                             45
  CLUS_2                           20                             51
  CLUS_3                           29                             23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 26(17Q23.1) MUTATED       95     37     30     54     21
  AMP PEAK 26(17Q23.1) WILD-TYPE     43     75     46     52     33
D26V7, multiclass
        clus
vv       AMP PEAK 26(17Q23.1) MUTATED AMP PEAK 26(17Q23.1) WILD-TYPE
  CLUS_1                           95                             43
  CLUS_2                           37                             75
  CLUS_3                           30                             46
  CLUS_4                           54                             52
  CLUS_5                           21                             33
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 26(17Q23.1) MUTATED       52     25     30     49      7     28
  AMP PEAK 26(17Q23.1) WILD-TYPE     31     32     14     35     39     23
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 26(17Q23.1) MUTATED       24      0     22
  AMP PEAK 26(17Q23.1) WILD-TYPE     25     18     32
D26V8, multiclass
        clus
vv       AMP PEAK 26(17Q23.1) MUTATED AMP PEAK 26(17Q23.1) WILD-TYPE
  CLUS_1                           52                             31
  CLUS_2                           25                             32
  CLUS_3                           30                             14
  CLUS_4                           49                             35
  CLUS_5                            7                             39
  CLUS_6                           28                             23
  CLUS_7                           24                             25
  CLUS_8                            0                             18
  CLUS_9                           22                             32
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17Q23.1) MUTATED       63    143     33
  AMP PEAK 26(17Q23.1) WILD-TYPE    116     88     45
D26V9, multiclass
        clus
vv       AMP PEAK 26(17Q23.1) MUTATED AMP PEAK 26(17Q23.1) WILD-TYPE
  CLUS_1                           63                            116
  CLUS_2                          143                             88
  CLUS_3                           33                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 26(17Q23.1) MUTATED       25     25     68     52     55     14
  AMP PEAK 26(17Q23.1) WILD-TYPE     46     19     50     85     28     21
D26V10, multiclass
        clus
vv       AMP PEAK 26(17Q23.1) MUTATED AMP PEAK 26(17Q23.1) WILD-TYPE
  CLUS_1                           25                             46
  CLUS_2                           25                             19
  CLUS_3                           68                             50
  CLUS_4                           52                             85
  CLUS_5                           55                             28
  CLUS_6                           14                             21
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17Q23.1) MUTATED       60    105     37
  AMP PEAK 26(17Q23.1) WILD-TYPE     95     87     41
D26V11, multiclass
        clus
vv       AMP PEAK 26(17Q23.1) MUTATED AMP PEAK 26(17Q23.1) WILD-TYPE
  CLUS_1                           60                             95
  CLUS_2                          105                             87
  CLUS_3                           37                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17Q23.1) MUTATED       68    122     12
  AMP PEAK 26(17Q23.1) WILD-TYPE    118     87     18
D26V12, multiclass
        clus
vv       AMP PEAK 26(17Q23.1) MUTATED AMP PEAK 26(17Q23.1) WILD-TYPE
  CLUS_1                           68                            118
  CLUS_2                          122                             87
  CLUS_3                           12                             18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(27) Variable = AMP PEAK 27(18Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(18Q11.2) MUTATED        1      1      1      3
  AMP PEAK 27(18Q11.2) WILD-TYPE      4      8     11      3
D27V1, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            1                              8
  CLUS_3                            1                             11
  CLUS_4                            3                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(18Q11.2) MUTATED        1      1      4
  AMP PEAK 27(18Q11.2) WILD-TYPE     13     10      3
D27V2, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                            1                             13
  CLUS_2                            1                             10
  CLUS_3                            4                              3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(18Q11.2) MUTATED       45     27     27
  AMP PEAK 27(18Q11.2) WILD-TYPE    141    189     64
D27V3, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                           45                            141
  CLUS_2                           27                            189
  CLUS_3                           27                             64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(18Q11.2) MUTATED        6     48     24     11
  AMP PEAK 27(18Q11.2) WILD-TYPE     86     77     91     88
D27V4, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                            6                             86
  CLUS_2                           48                             77
  CLUS_3                           24                             91
  CLUS_4                           11                             88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(18Q11.2) MUTATED       16     11     21
  AMP PEAK 27(18Q11.2) WILD-TYPE     78     57     52
D27V5, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                           16                             78
  CLUS_2                           11                             57
  CLUS_3                           21                             52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(18Q11.2) MUTATED       16     13     19
  AMP PEAK 27(18Q11.2) WILD-TYPE     96     58     33
D27V6, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                           16                             96
  CLUS_2                           13                             58
  CLUS_3                           19                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 27(18Q11.2) MUTATED       24     12     19     37      6
  AMP PEAK 27(18Q11.2) WILD-TYPE    114    100     57     69     48
D27V7, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                           24                            114
  CLUS_2                           12                            100
  CLUS_3                           19                             57
  CLUS_4                           37                             69
  CLUS_5                            6                             48
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 27(18Q11.2) MUTATED       12      5      7     27      6     21
  AMP PEAK 27(18Q11.2) WILD-TYPE     71     52     37     57     40     30
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 27(18Q11.2) MUTATED       10      4      6
  AMP PEAK 27(18Q11.2) WILD-TYPE     39     14     48
D27V8, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                           12                             71
  CLUS_2                            5                             52
  CLUS_3                            7                             37
  CLUS_4                           27                             57
  CLUS_5                            6                             40
  CLUS_6                           21                             30
  CLUS_7                           10                             39
  CLUS_8                            4                             14
  CLUS_9                            6                             48
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(18Q11.2) MUTATED       20     63     15
  AMP PEAK 27(18Q11.2) WILD-TYPE    159    168     63
D27V9, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                           20                            159
  CLUS_2                           63                            168
  CLUS_3                           15                             63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 27(18Q11.2) MUTATED        6     14     26     16     32      4
  AMP PEAK 27(18Q11.2) WILD-TYPE     65     30     92    121     51     31
D27V10, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                            6                             65
  CLUS_2                           14                             30
  CLUS_3                           26                             92
  CLUS_4                           16                            121
  CLUS_5                           32                             51
  CLUS_6                            4                             31
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(18Q11.2) MUTATED       21     53     15
  AMP PEAK 27(18Q11.2) WILD-TYPE    134    139     63
D27V11, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                           21                            134
  CLUS_2                           53                            139
  CLUS_3                           15                             63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(18Q11.2) MUTATED       25     61      3
  AMP PEAK 27(18Q11.2) WILD-TYPE    161    148     27
D27V12, multiclass
        clus
vv       AMP PEAK 27(18Q11.2) MUTATED AMP PEAK 27(18Q11.2) WILD-TYPE
  CLUS_1                           25                            161
  CLUS_2                           61                            148
  CLUS_3                            3                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(28) Variable = AMP PEAK 28(19Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(19Q12) MUTATED        1      4      0      2
  AMP PEAK 28(19Q12) WILD-TYPE      4      5     12      4
D28V1, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                          1                            4
  CLUS_2                          4                            5
  CLUS_3                          0                           12
  CLUS_4                          2                            4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(19Q12) MUTATED        0      5      2
  AMP PEAK 28(19Q12) WILD-TYPE     14      6      5
D28V2, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                          0                           14
  CLUS_2                          5                            6
  CLUS_3                          2                            5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(19Q12) MUTATED       53     43     37
  AMP PEAK 28(19Q12) WILD-TYPE    133    173     54
D28V3, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                         53                          133
  CLUS_2                         43                          173
  CLUS_3                         37                           54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(19Q12) MUTATED       13     58     22     27
  AMP PEAK 28(19Q12) WILD-TYPE     79     67     93     72
D28V4, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                         13                           79
  CLUS_2                         58                           67
  CLUS_3                         22                           93
  CLUS_4                         27                           72
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(19Q12) MUTATED       25     14     24
  AMP PEAK 28(19Q12) WILD-TYPE     69     54     49
D28V5, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                         25                           69
  CLUS_2                         14                           54
  CLUS_3                         24                           49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(19Q12) MUTATED       32     13     18
  AMP PEAK 28(19Q12) WILD-TYPE     80     58     34
D28V6, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                         32                           80
  CLUS_2                         13                           58
  CLUS_3                         18                           34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 28(19Q12) MUTATED       38     17     28     40      8
  AMP PEAK 28(19Q12) WILD-TYPE    100     95     48     66     46
D28V7, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                         38                          100
  CLUS_2                         17                           95
  CLUS_3                         28                           48
  CLUS_4                         40                           66
  CLUS_5                          8                           46
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 28(19Q12) MUTATED       18      5     14     32     12     17     23
  AMP PEAK 28(19Q12) WILD-TYPE     65     52     30     52     34     34     26
                              vv
clus                           CLUS_8 CLUS_9
  AMP PEAK 28(19Q12) MUTATED        1      9
  AMP PEAK 28(19Q12) WILD-TYPE     17     45
D28V8, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                         18                           65
  CLUS_2                          5                           52
  CLUS_3                         14                           30
  CLUS_4                         32                           52
  CLUS_5                         12                           34
  CLUS_6                         17                           34
  CLUS_7                         23                           26
  CLUS_8                          1                           17
  CLUS_9                          9                           45
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(19Q12) MUTATED       30     85     18
  AMP PEAK 28(19Q12) WILD-TYPE    149    146     60
D28V9, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                         30                          149
  CLUS_2                         85                          146
  CLUS_3                         18                           60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 28(19Q12) MUTATED       16     14     45     20     33      5
  AMP PEAK 28(19Q12) WILD-TYPE     55     30     73    117     50     30
D28V10, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                         16                           55
  CLUS_2                         14                           30
  CLUS_3                         45                           73
  CLUS_4                         20                          117
  CLUS_5                         33                           50
  CLUS_6                          5                           30
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(19Q12) MUTATED       28     75     16
  AMP PEAK 28(19Q12) WILD-TYPE    127    117     62
D28V11, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                         28                          127
  CLUS_2                         75                          117
  CLUS_3                         16                           62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(19Q12) MUTATED       34     81      4
  AMP PEAK 28(19Q12) WILD-TYPE    152    128     26
D28V12, multiclass
        clus
vv       AMP PEAK 28(19Q12) MUTATED AMP PEAK 28(19Q12) WILD-TYPE
  CLUS_1                         34                          152
  CLUS_2                         81                          128
  CLUS_3                          4                           26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(29) Variable = AMP PEAK 29(20P11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(20P11.21) MUTATED        1      2      3      5
  AMP PEAK 29(20P11.21) WILD-TYPE      4      7      9      1
D29V1, multiclass
        clus
vv       AMP PEAK 29(20P11.21) MUTATED AMP PEAK 29(20P11.21) WILD-TYPE
  CLUS_1                             1                               4
  CLUS_2                             2                               7
  CLUS_3                             3                               9
  CLUS_4                             5                               1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(20P11.21) MUTATED        3      3      5
  AMP PEAK 29(20P11.21) WILD-TYPE     11      8      2
D29V2, multiclass
        clus
vv       AMP PEAK 29(20P11.21) MUTATED AMP PEAK 29(20P11.21) WILD-TYPE
  CLUS_1                             3                              11
  CLUS_2                             3                               8
  CLUS_3                             5                               2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(20P11.21) MUTATED       73     62     53
  AMP PEAK 29(20P11.21) WILD-TYPE    113    154     38
D29V3, multiclass
        clus
vv       AMP PEAK 29(20P11.21) MUTATED AMP PEAK 29(20P11.21) WILD-TYPE
  CLUS_1                            73                             113
  CLUS_2                            62                             154
  CLUS_3                            53                              38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(20P11.21) MUTATED       21     69     35     36
  AMP PEAK 29(20P11.21) WILD-TYPE     71     56     80     63
D29V4, multiclass
        clus
vv       AMP PEAK 29(20P11.21) MUTATED AMP PEAK 29(20P11.21) WILD-TYPE
  CLUS_1                            21                              71
  CLUS_2                            69                              56
  CLUS_3                            35                              80
  CLUS_4                            36                              63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(20P11.21) MUTATED       39     23     33
  AMP PEAK 29(20P11.21) WILD-TYPE     55     45     40
D29V5, multiclass
        clus
vv       AMP PEAK 29(20P11.21) MUTATED AMP PEAK 29(20P11.21) WILD-TYPE
  CLUS_1                            39                              55
  CLUS_2                            23                              45
  CLUS_3                            33                              40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(20P11.21) MUTATED       43     23     29
  AMP PEAK 29(20P11.21) WILD-TYPE     69     48     23
D29V6, multiclass
        clus
vv       AMP PEAK 29(20P11.21) MUTATED AMP PEAK 29(20P11.21) WILD-TYPE
  CLUS_1                            43                              69
  CLUS_2                            23                              48
  CLUS_3                            29                              23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 29(20P11.21) MUTATED       47     34     25     62     16
  AMP PEAK 29(20P11.21) WILD-TYPE     91     78     51     44     38
D29V7, multiclass
        clus
vv       AMP PEAK 29(20P11.21) MUTATED AMP PEAK 29(20P11.21) WILD-TYPE
  CLUS_1                            47                              91
  CLUS_2                            34                              78
  CLUS_3                            25                              51
  CLUS_4                            62                              44
  CLUS_5                            16                              38
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 29(20P11.21) MUTATED       22     14     18     52     17     29
  AMP PEAK 29(20P11.21) WILD-TYPE     61     43     26     32     29     22
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 29(20P11.21) MUTATED       16      1     15
  AMP PEAK 29(20P11.21) WILD-TYPE     33     17     39
D29V8, multiclass
        clus
vv       AMP PEAK 29(20P11.21) MUTATED AMP PEAK 29(20P11.21) WILD-TYPE
  CLUS_1                            22                              61
  CLUS_2                            14                              43
  CLUS_3                            18                              26
  CLUS_4                            52                              32
  CLUS_5                            17                              29
  CLUS_6                            29                              22
  CLUS_7                            16                              33
  CLUS_8                             1                              17
  CLUS_9                            15                              39
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(20P11.21) MUTATED       47    108     31
  AMP PEAK 29(20P11.21) WILD-TYPE    132    123     47
D29V9, multiclass
        clus
vv       AMP PEAK 29(20P11.21) MUTATED AMP PEAK 29(20P11.21) WILD-TYPE
  CLUS_1                            47                             132
  CLUS_2                           108                             123
  CLUS_3                            31                              47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 29(20P11.21) MUTATED       19     20     45     40     48     14
  AMP PEAK 29(20P11.21) WILD-TYPE     52     24     73     97     35     21
D29V10, multiclass
        clus
vv       AMP PEAK 29(20P11.21) MUTATED AMP PEAK 29(20P11.21) WILD-TYPE
  CLUS_1                            19                              52
  CLUS_2                            20                              24
  CLUS_3                            45                              73
  CLUS_4                            40                              97
  CLUS_5                            48                              35
  CLUS_6                            14                              21
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(20P11.21) MUTATED       41     90     31
  AMP PEAK 29(20P11.21) WILD-TYPE    114    102     47
D29V11, multiclass
        clus
vv       AMP PEAK 29(20P11.21) MUTATED AMP PEAK 29(20P11.21) WILD-TYPE
  CLUS_1                            41                             114
  CLUS_2                            90                             102
  CLUS_3                            31                              47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(20P11.21) MUTATED       49    100     13
  AMP PEAK 29(20P11.21) WILD-TYPE    137    109     17
D29V12, multiclass
        clus
vv       AMP PEAK 29(20P11.21) MUTATED AMP PEAK 29(20P11.21) WILD-TYPE
  CLUS_1                            49                             137
  CLUS_2                           100                             109
  CLUS_3                            13                              17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(30) Variable = AMP PEAK 30(20Q13.33) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(20Q13.33) MUTATED        2      5      2      6
  AMP PEAK 30(20Q13.33) WILD-TYPE      3      4     10      0
D30V1, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                             2                               3
  CLUS_2                             5                               4
  CLUS_3                             2                              10
  CLUS_4                             6                               0
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(20Q13.33) MUTATED        4      5      6
  AMP PEAK 30(20Q13.33) WILD-TYPE     10      6      1
D30V2, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                             4                              10
  CLUS_2                             5                               6
  CLUS_3                             6                               1
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(20Q13.33) MUTATED      103     73     61
  AMP PEAK 30(20Q13.33) WILD-TYPE     83    143     30
D30V3, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                           103                              83
  CLUS_2                            73                             143
  CLUS_3                            61                              30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(20Q13.33) MUTATED       32     80     51     41
  AMP PEAK 30(20Q13.33) WILD-TYPE     60     45     64     58
D30V4, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                            32                              60
  CLUS_2                            80                              45
  CLUS_3                            51                              64
  CLUS_4                            41                              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(20Q13.33) MUTATED       55     25     43
  AMP PEAK 30(20Q13.33) WILD-TYPE     39     43     30
D30V5, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                            55                              39
  CLUS_2                            25                              43
  CLUS_3                            43                              30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(20Q13.33) MUTATED       63     26     34
  AMP PEAK 30(20Q13.33) WILD-TYPE     49     45     18
D30V6, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                            63                              49
  CLUS_2                            26                              45
  CLUS_3                            34                              18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 30(20Q13.33) MUTATED       71     41     27     75     19
  AMP PEAK 30(20Q13.33) WILD-TYPE     67     71     49     31     35
D30V7, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                            71                              67
  CLUS_2                            41                              71
  CLUS_3                            27                              49
  CLUS_4                            75                              31
  CLUS_5                            19                              35
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 30(20Q13.33) MUTATED       34     21     28     56     21     36
  AMP PEAK 30(20Q13.33) WILD-TYPE     49     36     16     28     25     15
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 30(20Q13.33) MUTATED       17      2     18
  AMP PEAK 30(20Q13.33) WILD-TYPE     32     16     36
D30V8, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                            34                              49
  CLUS_2                            21                              36
  CLUS_3                            28                              16
  CLUS_4                            56                              28
  CLUS_5                            21                              25
  CLUS_6                            36                              15
  CLUS_7                            17                              32
  CLUS_8                             2                              16
  CLUS_9                            18                              36
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(20Q13.33) MUTATED       63    135     35
  AMP PEAK 30(20Q13.33) WILD-TYPE    116     96     43
D30V9, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                            63                             116
  CLUS_2                           135                              96
  CLUS_3                            35                              43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 30(20Q13.33) MUTATED       24     26     59     54     54     16
  AMP PEAK 30(20Q13.33) WILD-TYPE     47     18     59     83     29     19
D30V10, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                            24                              47
  CLUS_2                            26                              18
  CLUS_3                            59                              59
  CLUS_4                            54                              83
  CLUS_5                            54                              29
  CLUS_6                            16                              19
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(20Q13.33) MUTATED       54    113     36
  AMP PEAK 30(20Q13.33) WILD-TYPE    101     79     42
D30V11, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                            54                             101
  CLUS_2                           113                              79
  CLUS_3                            36                              42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(20Q13.33) MUTATED       64    122     17
  AMP PEAK 30(20Q13.33) WILD-TYPE    122     87     13
D30V12, multiclass
        clus
vv       AMP PEAK 30(20Q13.33) MUTATED AMP PEAK 30(20Q13.33) WILD-TYPE
  CLUS_1                            64                             122
  CLUS_2                           122                              87
  CLUS_3                            17                              13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(31) Variable = AMP PEAK 31(22Q11.22) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(22Q11.22) MUTATED        1      2      1      3
  AMP PEAK 31(22Q11.22) WILD-TYPE      4      7     11      3
D31V1, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                             1                               4
  CLUS_2                             2                               7
  CLUS_3                             1                              11
  CLUS_4                             3                               3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(22Q11.22) MUTATED        1      3      3
  AMP PEAK 31(22Q11.22) WILD-TYPE     13      8      4
D31V2, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                             1                              13
  CLUS_2                             3                               8
  CLUS_3                             3                               4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(22Q11.22) MUTATED       52     20     15
  AMP PEAK 31(22Q11.22) WILD-TYPE    134    196     76
D31V3, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                            52                             134
  CLUS_2                            20                             196
  CLUS_3                            15                              76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(22Q11.22) MUTATED       14     28     18     17
  AMP PEAK 31(22Q11.22) WILD-TYPE     78     97     97     82
D31V4, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                            14                              78
  CLUS_2                            28                              97
  CLUS_3                            18                              97
  CLUS_4                            17                              82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(22Q11.22) MUTATED       23      7     18
  AMP PEAK 31(22Q11.22) WILD-TYPE     71     61     55
D31V5, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                            23                              71
  CLUS_2                             7                              61
  CLUS_3                            18                              55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(22Q11.22) MUTATED       28      7     13
  AMP PEAK 31(22Q11.22) WILD-TYPE     84     64     39
D31V6, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                            28                              84
  CLUS_2                             7                              64
  CLUS_3                            13                              39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 31(22Q11.22) MUTATED       26     14     13     21     11
  AMP PEAK 31(22Q11.22) WILD-TYPE    112     98     63     85     43
D31V7, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                            26                             112
  CLUS_2                            14                              98
  CLUS_3                            13                              63
  CLUS_4                            21                              85
  CLUS_5                            11                              43
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 31(22Q11.22) MUTATED       12      6     11     24      4      9
  AMP PEAK 31(22Q11.22) WILD-TYPE     71     51     33     60     42     42
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 31(22Q11.22) MUTATED        9      1      9
  AMP PEAK 31(22Q11.22) WILD-TYPE     40     17     45
D31V8, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                            12                              71
  CLUS_2                             6                              51
  CLUS_3                            11                              33
  CLUS_4                            24                              60
  CLUS_5                             4                              42
  CLUS_6                             9                              42
  CLUS_7                             9                              40
  CLUS_8                             1                              17
  CLUS_9                             9                              45
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(22Q11.22) MUTATED       23     47     17
  AMP PEAK 31(22Q11.22) WILD-TYPE    156    184     61
D31V9, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                            23                             156
  CLUS_2                            47                             184
  CLUS_3                            17                              61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 31(22Q11.22) MUTATED       11      7     24     19     21      5
  AMP PEAK 31(22Q11.22) WILD-TYPE     60     37     94    118     62     30
D31V10, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                            11                              60
  CLUS_2                             7                              37
  CLUS_3                            24                              94
  CLUS_4                            19                             118
  CLUS_5                            21                              62
  CLUS_6                             5                              30
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(22Q11.22) MUTATED       19     43     14
  AMP PEAK 31(22Q11.22) WILD-TYPE    136    149     64
D31V11, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                            19                             136
  CLUS_2                            43                             149
  CLUS_3                            14                              64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(22Q11.22) MUTATED       24     47      5
  AMP PEAK 31(22Q11.22) WILD-TYPE    162    162     25
D31V12, multiclass
        clus
vv       AMP PEAK 31(22Q11.22) MUTATED AMP PEAK 31(22Q11.22) WILD-TYPE
  CLUS_1                            24                             162
  CLUS_2                            47                             162
  CLUS_3                             5                              25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(32) Variable = AMP PEAK 32(XQ28) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 32(XQ28) MUTATED        3      3      3      4
  AMP PEAK 32(XQ28) WILD-TYPE      2      6      9      2
D32V1, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                         3                           2
  CLUS_2                         3                           6
  CLUS_3                         3                           9
  CLUS_4                         4                           2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(XQ28) MUTATED        4      4      5
  AMP PEAK 32(XQ28) WILD-TYPE     10      7      2
D32V2, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                         4                          10
  CLUS_2                         4                           7
  CLUS_3                         5                           2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(XQ28) MUTATED       91     33     25
  AMP PEAK 32(XQ28) WILD-TYPE     95    183     66
D32V3, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        91                          95
  CLUS_2                        33                         183
  CLUS_3                        25                          66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 32(XQ28) MUTATED       16     44     44     21
  AMP PEAK 32(XQ28) WILD-TYPE     76     81     71     78
D32V4, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        16                          76
  CLUS_2                        44                          81
  CLUS_3                        44                          71
  CLUS_4                        21                          78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(XQ28) MUTATED       34     17     28
  AMP PEAK 32(XQ28) WILD-TYPE     60     51     45
D32V5, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        34                          60
  CLUS_2                        17                          51
  CLUS_3                        28                          45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(XQ28) MUTATED       42     16     21
  AMP PEAK 32(XQ28) WILD-TYPE     70     55     31
D32V6, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        42                          70
  CLUS_2                        16                          55
  CLUS_3                        21                          31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 32(XQ28) MUTATED       65     23     17     32     12
  AMP PEAK 32(XQ28) WILD-TYPE     73     89     59     74     42
D32V7, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        65                          73
  CLUS_2                        23                          89
  CLUS_3                        17                          59
  CLUS_4                        32                          74
  CLUS_5                        12                          42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 32(XQ28) MUTATED       32     13     23     34      6     13     13
  AMP PEAK 32(XQ28) WILD-TYPE     51     44     21     50     40     38     36
                             vv
clus                          CLUS_8 CLUS_9
  AMP PEAK 32(XQ28) MUTATED        0     15
  AMP PEAK 32(XQ28) WILD-TYPE     18     39
D32V8, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        32                          51
  CLUS_2                        13                          44
  CLUS_3                        23                          21
  CLUS_4                        34                          50
  CLUS_5                         6                          40
  CLUS_6                        13                          38
  CLUS_7                        13                          36
  CLUS_8                         0                          18
  CLUS_9                        15                          39
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(XQ28) MUTATED       41     75     31
  AMP PEAK 32(XQ28) WILD-TYPE    138    156     47
D32V9, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        41                         138
  CLUS_2                        75                         156
  CLUS_3                        31                          47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 32(XQ28) MUTATED       15     16     40     40     27      9
  AMP PEAK 32(XQ28) WILD-TYPE     56     28     78     97     56     26
D32V10, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        15                          56
  CLUS_2                        16                          28
  CLUS_3                        40                          78
  CLUS_4                        40                          97
  CLUS_5                        27                          56
  CLUS_6                         9                          26
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(XQ28) MUTATED       32     63     30
  AMP PEAK 32(XQ28) WILD-TYPE    123    129     48
D32V11, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        32                         123
  CLUS_2                        63                         129
  CLUS_3                        30                          48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(XQ28) MUTATED       44     71     10
  AMP PEAK 32(XQ28) WILD-TYPE    142    138     20
D32V12, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        44                         142
  CLUS_2                        71                         138
  CLUS_3                        10                          20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(33) Variable = DEL PEAK  1(1P36.13) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.13) MUTATED        1      3      2      2
  DEL PEAK  1(1P36.13) WILD-TYPE      4      6     10      4
D33V1, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            3                              6
  CLUS_3                            2                             10
  CLUS_4                            2                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.13) MUTATED        2      3      3
  DEL PEAK  1(1P36.13) WILD-TYPE     12      8      4
D33V2, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                            2                             12
  CLUS_2                            3                              8
  CLUS_3                            3                              4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.13) MUTATED       32     47     37
  DEL PEAK  1(1P36.13) WILD-TYPE    154    169     54
D33V3, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           32                            154
  CLUS_2                           47                            169
  CLUS_3                           37                             54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.13) MUTATED       12     42     29     15
  DEL PEAK  1(1P36.13) WILD-TYPE     80     83     86     84
D33V4, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           12                             80
  CLUS_2                           42                             83
  CLUS_3                           29                             86
  CLUS_4                           15                             84
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.13) MUTATED       27     16     20
  DEL PEAK  1(1P36.13) WILD-TYPE     67     52     53
D33V5, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           27                             67
  CLUS_2                           16                             52
  CLUS_3                           20                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.13) MUTATED       28     18     17
  DEL PEAK  1(1P36.13) WILD-TYPE     84     53     35
D33V6, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           28                             84
  CLUS_2                           18                             53
  CLUS_3                           17                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.13) MUTATED       31     15     23     38      5
  DEL PEAK  1(1P36.13) WILD-TYPE    107     97     53     68     49
D33V7, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           31                            107
  CLUS_2                           15                             97
  CLUS_3                           23                             53
  CLUS_4                           38                             68
  CLUS_5                            5                             49
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  1(1P36.13) MUTATED       12      9     15     17     11     25
  DEL PEAK  1(1P36.13) WILD-TYPE     71     48     29     67     35     26
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK  1(1P36.13) MUTATED       17      2      4
  DEL PEAK  1(1P36.13) WILD-TYPE     32     16     50
D33V8, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           12                             71
  CLUS_2                            9                             48
  CLUS_3                           15                             29
  CLUS_4                           17                             67
  CLUS_5                           11                             35
  CLUS_6                           25                             26
  CLUS_7                           17                             32
  CLUS_8                            2                             16
  CLUS_9                            4                             50
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.13) MUTATED       38     64     11
  DEL PEAK  1(1P36.13) WILD-TYPE    141    167     67
D33V9, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           38                            141
  CLUS_2                           64                            167
  CLUS_3                           11                             67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  1(1P36.13) MUTATED       17     21     32     21     18      4
  DEL PEAK  1(1P36.13) WILD-TYPE     54     23     86    116     65     31
D33V10, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           17                             54
  CLUS_2                           21                             23
  CLUS_3                           32                             86
  CLUS_4                           21                            116
  CLUS_5                           18                             65
  CLUS_6                            4                             31
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.13) MUTATED       30     54     12
  DEL PEAK  1(1P36.13) WILD-TYPE    125    138     66
D33V11, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           30                            125
  CLUS_2                           54                            138
  CLUS_3                           12                             66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.13) MUTATED       35     59      2
  DEL PEAK  1(1P36.13) WILD-TYPE    151    150     28
D33V12, multiclass
        clus
vv       DEL PEAK  1(1P36.13) MUTATED DEL PEAK  1(1P36.13) WILD-TYPE
  CLUS_1                           35                            151
  CLUS_2                           59                            150
  CLUS_3                            2                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(34) Variable = DEL PEAK  2(1P13.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.1) MUTATED        1      4      3      3
  DEL PEAK  2(1P13.1) WILD-TYPE      4      5      9      3
D34V1, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                           1                             4
  CLUS_2                           4                             5
  CLUS_3                           3                             9
  CLUS_4                           3                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED        3      5      3
  DEL PEAK  2(1P13.1) WILD-TYPE     11      6      4
D34V2, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                           3                            11
  CLUS_2                           5                             6
  CLUS_3                           3                             4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       44     51     49
  DEL PEAK  2(1P13.1) WILD-TYPE    142    165     42
D34V3, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          44                           142
  CLUS_2                          51                           165
  CLUS_3                          49                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.1) MUTATED       24     45     34     14
  DEL PEAK  2(1P13.1) WILD-TYPE     68     80     81     85
D34V4, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          24                            68
  CLUS_2                          45                            80
  CLUS_3                          34                            81
  CLUS_4                          14                            85
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       29     20     26
  DEL PEAK  2(1P13.1) WILD-TYPE     65     48     47
D34V5, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          29                            65
  CLUS_2                          20                            48
  CLUS_3                          26                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       31     21     23
  DEL PEAK  2(1P13.1) WILD-TYPE     81     50     29
D34V6, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          31                            81
  CLUS_2                          21                            50
  CLUS_3                          23                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(1P13.1) MUTATED       33     25     23     50     10
  DEL PEAK  2(1P13.1) WILD-TYPE    105     87     53     56     44
D34V7, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          33                           105
  CLUS_2                          25                            87
  CLUS_3                          23                            53
  CLUS_4                          50                            56
  CLUS_5                          10                            44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  2(1P13.1) MUTATED       16     15     15     22     20     27
  DEL PEAK  2(1P13.1) WILD-TYPE     67     42     29     62     26     24
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK  2(1P13.1) MUTATED       16      2      8
  DEL PEAK  2(1P13.1) WILD-TYPE     33     16     46
D34V8, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          16                            67
  CLUS_2                          15                            42
  CLUS_3                          15                            29
  CLUS_4                          22                            62
  CLUS_5                          20                            26
  CLUS_6                          27                            24
  CLUS_7                          16                            33
  CLUS_8                           2                            16
  CLUS_9                           8                            46
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       46     75     20
  DEL PEAK  2(1P13.1) WILD-TYPE    133    156     58
D34V9, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          46                           133
  CLUS_2                          75                           156
  CLUS_3                          20                            58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  2(1P13.1) MUTATED       16     25     31     28     25     16
  DEL PEAK  2(1P13.1) WILD-TYPE     55     19     87    109     58     19
D34V10, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          16                            55
  CLUS_2                          25                            19
  CLUS_3                          31                            87
  CLUS_4                          28                           109
  CLUS_5                          25                            58
  CLUS_6                          16                            19
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       35     55     25
  DEL PEAK  2(1P13.1) WILD-TYPE    120    137     53
D34V11, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          35                           120
  CLUS_2                          55                           137
  CLUS_3                          25                            53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       37     65     13
  DEL PEAK  2(1P13.1) WILD-TYPE    149    144     17
D34V12, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          37                           149
  CLUS_2                          65                           144
  CLUS_3                          13                            17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(35) Variable = DEL PEAK  3(2Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2Q22.1) MUTATED        0      1      2      0
  DEL PEAK  3(2Q22.1) WILD-TYPE      5      8     10      6
D35V1, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           0                             5
  CLUS_2                           1                             8
  CLUS_3                           2                            10
  CLUS_4                           0                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q22.1) MUTATED        2      1      0
  DEL PEAK  3(2Q22.1) WILD-TYPE     12     10      7
D35V2, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           2                            12
  CLUS_2                           1                            10
  CLUS_3                           0                             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q22.1) MUTATED       23      9     12
  DEL PEAK  3(2Q22.1) WILD-TYPE    163    207     79
D35V3, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          23                           163
  CLUS_2                           9                           207
  CLUS_3                          12                            79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2Q22.1) MUTATED        6     19      9      4
  DEL PEAK  3(2Q22.1) WILD-TYPE     86    106    106     95
D35V4, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           6                            86
  CLUS_2                          19                           106
  CLUS_3                           9                           106
  CLUS_4                           4                            95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q22.1) MUTATED        8      3     13
  DEL PEAK  3(2Q22.1) WILD-TYPE     86     65     60
D35V5, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           8                            86
  CLUS_2                           3                            65
  CLUS_3                          13                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q22.1) MUTATED       13      5      6
  DEL PEAK  3(2Q22.1) WILD-TYPE     99     66     46
D35V6, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          13                            99
  CLUS_2                           5                            66
  CLUS_3                           6                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(2Q22.1) MUTATED       10      7     11     15      1
  DEL PEAK  3(2Q22.1) WILD-TYPE    128    105     65     91     53
D35V7, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                          10                           128
  CLUS_2                           7                           105
  CLUS_3                          11                            65
  CLUS_4                          15                            91
  CLUS_5                           1                            53
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  3(2Q22.1) MUTATED        5      6      3     10      2      8
  DEL PEAK  3(2Q22.1) WILD-TYPE     78     51     41     74     44     43
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK  3(2Q22.1) MUTATED       10      0      0
  DEL PEAK  3(2Q22.1) WILD-TYPE     39     18     54
D35V8, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           5                            78
  CLUS_2                           6                            51
  CLUS_3                           3                            41
  CLUS_4                          10                            74
  CLUS_5                           2                            44
  CLUS_6                           8                            43
  CLUS_7                          10                            39
  CLUS_8                           0                            18
  CLUS_9                           0                            54
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q22.1) MUTATED        8     27      8
  DEL PEAK  3(2Q22.1) WILD-TYPE    171    204     70
D35V9, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           8                           171
  CLUS_2                          27                           204
  CLUS_3                           8                            70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  3(2Q22.1) MUTATED        3      4      9      7     17      3
  DEL PEAK  3(2Q22.1) WILD-TYPE     68     40    109    130     66     32
D35V10, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           3                            68
  CLUS_2                           4                            40
  CLUS_3                           9                           109
  CLUS_4                           7                           130
  CLUS_5                          17                            66
  CLUS_6                           3                            32
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q22.1) MUTATED        9     20      9
  DEL PEAK  3(2Q22.1) WILD-TYPE    146    172     69
D35V11, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           9                           146
  CLUS_2                          20                           172
  CLUS_3                           9                            69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q22.1) MUTATED        8     27      3
  DEL PEAK  3(2Q22.1) WILD-TYPE    178    182     27
D35V12, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                           8                           178
  CLUS_2                          27                           182
  CLUS_3                           3                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(36) Variable = DEL PEAK  4(2Q37.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q37.3) MUTATED        1      3      3      3
  DEL PEAK  4(2Q37.3) WILD-TYPE      4      6      9      3
D36V1, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                           1                             4
  CLUS_2                           3                             6
  CLUS_3                           3                             9
  CLUS_4                           3                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.3) MUTATED        4      2      4
  DEL PEAK  4(2Q37.3) WILD-TYPE     10      9      3
D36V2, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                           4                            10
  CLUS_2                           2                             9
  CLUS_3                           4                             3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.3) MUTATED       36     11     16
  DEL PEAK  4(2Q37.3) WILD-TYPE    150    205     75
D36V3, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                          36                           150
  CLUS_2                          11                           205
  CLUS_3                          16                            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q37.3) MUTATED        8     23     16      5
  DEL PEAK  4(2Q37.3) WILD-TYPE     84    102     99     94
D36V4, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                           8                            84
  CLUS_2                          23                           102
  CLUS_3                          16                            99
  CLUS_4                           5                            94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.3) MUTATED       17      5     14
  DEL PEAK  4(2Q37.3) WILD-TYPE     77     63     59
D36V5, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                          17                            77
  CLUS_2                           5                            63
  CLUS_3                          14                            59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.3) MUTATED       22      5      9
  DEL PEAK  4(2Q37.3) WILD-TYPE     90     66     43
D36V6, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                          22                            90
  CLUS_2                           5                            66
  CLUS_3                           9                            43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(2Q37.3) MUTATED       24     10      7     19      3
  DEL PEAK  4(2Q37.3) WILD-TYPE    114    102     69     87     51
D36V7, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                          24                           114
  CLUS_2                          10                           102
  CLUS_3                           7                            69
  CLUS_4                          19                            87
  CLUS_5                           3                            51
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  4(2Q37.3) MUTATED       14      7      8     16      2      8
  DEL PEAK  4(2Q37.3) WILD-TYPE     69     50     36     68     44     43
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK  4(2Q37.3) MUTATED        5      0      3
  DEL PEAK  4(2Q37.3) WILD-TYPE     44     18     51
D36V8, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                          14                            69
  CLUS_2                           7                            50
  CLUS_3                           8                            36
  CLUS_4                          16                            68
  CLUS_5                           2                            44
  CLUS_6                           8                            43
  CLUS_7                           5                            44
  CLUS_8                           0                            18
  CLUS_9                           3                            51
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.3) MUTATED       12     41     10
  DEL PEAK  4(2Q37.3) WILD-TYPE    167    190     68
D36V9, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                          12                           167
  CLUS_2                          41                           190
  CLUS_3                          10                            68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  4(2Q37.3) MUTATED        3      7     23     11     15      4
  DEL PEAK  4(2Q37.3) WILD-TYPE     68     37     95    126     68     31
D36V10, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                           3                            68
  CLUS_2                           7                            37
  CLUS_3                          23                            95
  CLUS_4                          11                           126
  CLUS_5                          15                            68
  CLUS_6                           4                            31
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.3) MUTATED        9     30     11
  DEL PEAK  4(2Q37.3) WILD-TYPE    146    162     67
D36V11, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                           9                           146
  CLUS_2                          30                           162
  CLUS_3                          11                            67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q37.3) MUTATED       10     36      4
  DEL PEAK  4(2Q37.3) WILD-TYPE    176    173     26
D36V12, multiclass
        clus
vv       DEL PEAK  4(2Q37.3) MUTATED DEL PEAK  4(2Q37.3) WILD-TYPE
  CLUS_1                          10                           176
  CLUS_2                          36                           173
  CLUS_3                           4                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(37) Variable = DEL PEAK  5(3P26.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(3P26.3) MUTATED        1      4      3      5
  DEL PEAK  5(3P26.3) WILD-TYPE      4      5      9      1
D37V1, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                           1                             4
  CLUS_2                           4                             5
  CLUS_3                           3                             9
  CLUS_4                           5                             1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P26.3) MUTATED        5      3      5
  DEL PEAK  5(3P26.3) WILD-TYPE      9      8      2
D37V2, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                           5                             9
  CLUS_2                           3                             8
  CLUS_3                           5                             2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P26.3) MUTATED       96     72     55
  DEL PEAK  5(3P26.3) WILD-TYPE     90    144     36
D37V3, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                          96                            90
  CLUS_2                          72                           144
  CLUS_3                          55                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(3P26.3) MUTATED       34     74     44     43
  DEL PEAK  5(3P26.3) WILD-TYPE     58     51     71     56
D37V4, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                          34                            58
  CLUS_2                          74                            51
  CLUS_3                          44                            71
  CLUS_4                          43                            56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P26.3) MUTATED       45     27     43
  DEL PEAK  5(3P26.3) WILD-TYPE     49     41     30
D37V5, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                          45                            49
  CLUS_2                          27                            41
  CLUS_3                          43                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P26.3) MUTATED       54     24     37
  DEL PEAK  5(3P26.3) WILD-TYPE     58     47     15
D37V6, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                          54                            58
  CLUS_2                          24                            47
  CLUS_3                          37                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(3P26.3) MUTATED       60     43     34     61     23
  DEL PEAK  5(3P26.3) WILD-TYPE     78     69     42     45     31
D37V7, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                          60                            78
  CLUS_2                          43                            69
  CLUS_3                          34                            42
  CLUS_4                          61                            45
  CLUS_5                          23                            31
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  5(3P26.3) MUTATED       28     24     17     58     13     35
  DEL PEAK  5(3P26.3) WILD-TYPE     55     33     27     26     33     16
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK  5(3P26.3) MUTATED       28      0     18
  DEL PEAK  5(3P26.3) WILD-TYPE     21     18     36
D37V8, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                          28                            55
  CLUS_2                          24                            33
  CLUS_3                          17                            27
  CLUS_4                          58                            26
  CLUS_5                          13                            33
  CLUS_6                          35                            16
  CLUS_7                          28                            21
  CLUS_8                           0                            18
  CLUS_9                          18                            36
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P26.3) MUTATED       57    118     44
  DEL PEAK  5(3P26.3) WILD-TYPE    122    113     34
D37V9, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                          57                           122
  CLUS_2                         118                           113
  CLUS_3                          44                            34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  5(3P26.3) MUTATED       32     23     48     50     54     12
  DEL PEAK  5(3P26.3) WILD-TYPE     39     21     70     87     29     23
D37V10, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                          32                            39
  CLUS_2                          23                            21
  CLUS_3                          48                            70
  CLUS_4                          50                            87
  CLUS_5                          54                            29
  CLUS_6                          12                            23
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P26.3) MUTATED       56    103     33
  DEL PEAK  5(3P26.3) WILD-TYPE     99     89     45
D37V11, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                          56                            99
  CLUS_2                         103                            89
  CLUS_3                          33                            45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(3P26.3) MUTATED       66    114     12
  DEL PEAK  5(3P26.3) WILD-TYPE    120     95     18
D37V12, multiclass
        clus
vv       DEL PEAK  5(3P26.3) MUTATED DEL PEAK  5(3P26.3) WILD-TYPE
  CLUS_1                          66                           120
  CLUS_2                         114                            95
  CLUS_3                          12                            18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(38) Variable = DEL PEAK  6(3P21.31) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P21.31) MUTATED        1      6      3      4
  DEL PEAK  6(3P21.31) WILD-TYPE      4      3      9      2
D38V1, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            6                              3
  CLUS_3                            3                              9
  CLUS_4                            4                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P21.31) MUTATED        4      6      4
  DEL PEAK  6(3P21.31) WILD-TYPE     10      5      3
D38V2, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                            4                             10
  CLUS_2                            6                              5
  CLUS_3                            4                              3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P21.31) MUTATED      101     77     59
  DEL PEAK  6(3P21.31) WILD-TYPE     85    139     32
D38V3, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                          101                             85
  CLUS_2                           77                            139
  CLUS_3                           59                             32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P21.31) MUTATED       35     82     48     43
  DEL PEAK  6(3P21.31) WILD-TYPE     57     43     67     56
D38V4, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                           35                             57
  CLUS_2                           82                             43
  CLUS_3                           48                             67
  CLUS_4                           43                             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P21.31) MUTATED       47     27     47
  DEL PEAK  6(3P21.31) WILD-TYPE     47     41     26
D38V5, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                           47                             47
  CLUS_2                           27                             41
  CLUS_3                           47                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P21.31) MUTATED       60     24     37
  DEL PEAK  6(3P21.31) WILD-TYPE     52     47     15
D38V6, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                           60                             52
  CLUS_2                           24                             47
  CLUS_3                           37                             15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(3P21.31) MUTATED       63     43     37     65     25
  DEL PEAK  6(3P21.31) WILD-TYPE     75     69     39     41     29
D38V7, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                           63                             75
  CLUS_2                           43                             69
  CLUS_3                           37                             39
  CLUS_4                           65                             41
  CLUS_5                           25                             29
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  6(3P21.31) MUTATED       28     25     19     61     13     37
  DEL PEAK  6(3P21.31) WILD-TYPE     55     32     25     23     33     14
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK  6(3P21.31) MUTATED       30      1     19
  DEL PEAK  6(3P21.31) WILD-TYPE     19     17     35
D38V8, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                           28                             55
  CLUS_2                           25                             32
  CLUS_3                           19                             25
  CLUS_4                           61                             23
  CLUS_5                           13                             33
  CLUS_6                           37                             14
  CLUS_7                           30                             19
  CLUS_8                            1                             17
  CLUS_9                           19                             35
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P21.31) MUTATED       61    127     45
  DEL PEAK  6(3P21.31) WILD-TYPE    118    104     33
D38V9, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                           61                            118
  CLUS_2                          127                            104
  CLUS_3                           45                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  6(3P21.31) MUTATED       33     26     51     51     58     14
  DEL PEAK  6(3P21.31) WILD-TYPE     38     18     67     86     25     21
D38V10, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                           33                             38
  CLUS_2                           26                             18
  CLUS_3                           51                             67
  CLUS_4                           51                             86
  CLUS_5                           58                             25
  CLUS_6                           14                             21
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P21.31) MUTATED       58    108     38
  DEL PEAK  6(3P21.31) WILD-TYPE     97     84     40
D38V11, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                           58                             97
  CLUS_2                          108                             84
  CLUS_3                           38                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P21.31) MUTATED       69    122     13
  DEL PEAK  6(3P21.31) WILD-TYPE    117     87     17
D38V12, multiclass
        clus
vv       DEL PEAK  6(3P21.31) MUTATED DEL PEAK  6(3P21.31) WILD-TYPE
  CLUS_1                           69                            117
  CLUS_2                          122                             87
  CLUS_3                           13                             17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(39) Variable = DEL PEAK  7(3Q11.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3Q11.1) MUTATED        0      1      2      2
  DEL PEAK  7(3Q11.1) WILD-TYPE      5      8     10      4
D39V1, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                           0                             5
  CLUS_2                           1                             8
  CLUS_3                           2                            10
  CLUS_4                           2                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3Q11.1) MUTATED        2      1      2
  DEL PEAK  7(3Q11.1) WILD-TYPE     12     10      5
D39V2, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                           2                            12
  CLUS_2                           1                            10
  CLUS_3                           2                             5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3Q11.1) MUTATED       55     51     30
  DEL PEAK  7(3Q11.1) WILD-TYPE    131    165     61
D39V3, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                          55                           131
  CLUS_2                          51                           165
  CLUS_3                          30                            61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3Q11.1) MUTATED       30     46     32     19
  DEL PEAK  7(3Q11.1) WILD-TYPE     62     79     83     80
D39V4, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                          30                            62
  CLUS_2                          46                            79
  CLUS_3                          32                            83
  CLUS_4                          19                            80
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3Q11.1) MUTATED       25     20     23
  DEL PEAK  7(3Q11.1) WILD-TYPE     69     48     50
D39V5, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                          25                            69
  CLUS_2                          20                            48
  CLUS_3                          23                            50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3Q11.1) MUTATED       30     20     18
  DEL PEAK  7(3Q11.1) WILD-TYPE     82     51     34
D39V6, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                          30                            82
  CLUS_2                          20                            51
  CLUS_3                          18                            34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(3Q11.1) MUTATED       26     35     22     35     16
  DEL PEAK  7(3Q11.1) WILD-TYPE    112     77     54     71     38
D39V7, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                          26                           112
  CLUS_2                          35                            77
  CLUS_3                          22                            54
  CLUS_4                          35                            71
  CLUS_5                          16                            38
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  7(3Q11.1) MUTATED       21     17      6     19     16     22
  DEL PEAK  7(3Q11.1) WILD-TYPE     62     40     38     65     30     29
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK  7(3Q11.1) MUTATED       19      0     14
  DEL PEAK  7(3Q11.1) WILD-TYPE     30     18     40
D39V8, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                          21                            62
  CLUS_2                          17                            40
  CLUS_3                           6                            38
  CLUS_4                          19                            65
  CLUS_5                          16                            30
  CLUS_6                          22                            29
  CLUS_7                          19                            30
  CLUS_8                           0                            18
  CLUS_9                          14                            40
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3Q11.1) MUTATED       48     63     24
  DEL PEAK  7(3Q11.1) WILD-TYPE    131    168     54
D39V9, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                          48                           131
  CLUS_2                          63                           168
  CLUS_3                          24                            54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  7(3Q11.1) MUTATED       25     18     21     37     27      7
  DEL PEAK  7(3Q11.1) WILD-TYPE     46     26     97    100     56     28
D39V10, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                          25                            46
  CLUS_2                          18                            26
  CLUS_3                          21                            97
  CLUS_4                          37                           100
  CLUS_5                          27                            56
  CLUS_6                           7                            28
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3Q11.1) MUTATED       47     58     21
  DEL PEAK  7(3Q11.1) WILD-TYPE    108    134     57
D39V11, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                          47                           108
  CLUS_2                          58                           134
  CLUS_3                          21                            57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3Q11.1) MUTATED       51     68      7
  DEL PEAK  7(3Q11.1) WILD-TYPE    135    141     23
D39V12, multiclass
        clus
vv       DEL PEAK  7(3Q11.1) MUTATED DEL PEAK  7(3Q11.1) WILD-TYPE
  CLUS_1                          51                           135
  CLUS_2                          68                           141
  CLUS_3                           7                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(40) Variable = DEL PEAK  8(3Q29) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3Q29) MUTATED        0      2      2      2
  DEL PEAK  8(3Q29) WILD-TYPE      5      7     10      4
D40V1, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                         0                           5
  CLUS_2                         2                           7
  CLUS_3                         2                          10
  CLUS_4                         2                           4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3Q29) MUTATED        3      1      2
  DEL PEAK  8(3Q29) WILD-TYPE     11     10      5
D40V2, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                         3                          11
  CLUS_2                         1                          10
  CLUS_3                         2                           5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3Q29) MUTATED       53     48     32
  DEL PEAK  8(3Q29) WILD-TYPE    133    168     59
D40V3, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                        53                         133
  CLUS_2                        48                         168
  CLUS_3                        32                          59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3Q29) MUTATED       32     46     32     12
  DEL PEAK  8(3Q29) WILD-TYPE     60     79     83     87
D40V4, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                        32                          60
  CLUS_2                        46                          79
  CLUS_3                        32                          83
  CLUS_4                        12                          87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3Q29) MUTATED       22     24     18
  DEL PEAK  8(3Q29) WILD-TYPE     72     44     55
D40V5, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                        22                          72
  CLUS_2                        24                          44
  CLUS_3                        18                          55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3Q29) MUTATED       23     24     17
  DEL PEAK  8(3Q29) WILD-TYPE     89     47     35
D40V6, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                        23                          89
  CLUS_2                        24                          47
  CLUS_3                        17                          35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(3Q29) MUTATED       22     40     13     41     15
  DEL PEAK  8(3Q29) WILD-TYPE    116     72     63     65     39
D40V7, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                        22                         116
  CLUS_2                        40                          72
  CLUS_3                        13                          63
  CLUS_4                        41                          65
  CLUS_5                        15                          39
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK  8(3Q29) MUTATED       17     19      5     12     22     29     14
  DEL PEAK  8(3Q29) WILD-TYPE     66     38     39     72     24     22     35
                             vv
clus                          CLUS_8 CLUS_9
  DEL PEAK  8(3Q29) MUTATED        0     13
  DEL PEAK  8(3Q29) WILD-TYPE     18     41
D40V8, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                        17                          66
  CLUS_2                        19                          38
  CLUS_3                         5                          39
  CLUS_4                        12                          72
  CLUS_5                        22                          24
  CLUS_6                        29                          22
  CLUS_7                        14                          35
  CLUS_8                         0                          18
  CLUS_9                        13                          41
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3Q29) MUTATED       51     61     20
  DEL PEAK  8(3Q29) WILD-TYPE    128    170     58
D40V9, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                        51                         128
  CLUS_2                        61                         170
  CLUS_3                        20                          58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  8(3Q29) MUTATED       27     22     22     33     20      8
  DEL PEAK  8(3Q29) WILD-TYPE     44     22     96    104     63     27
D40V10, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                        27                          44
  CLUS_2                        22                          22
  CLUS_3                        22                          96
  CLUS_4                        33                         104
  CLUS_5                        20                          63
  CLUS_6                         8                          27
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3Q29) MUTATED       48     50     22
  DEL PEAK  8(3Q29) WILD-TYPE    107    142     56
D40V11, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                        48                         107
  CLUS_2                        50                         142
  CLUS_3                        22                          56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3Q29) MUTATED       54     59      7
  DEL PEAK  8(3Q29) WILD-TYPE    132    150     23
D40V12, multiclass
        clus
vv       DEL PEAK  8(3Q29) MUTATED DEL PEAK  8(3Q29) WILD-TYPE
  CLUS_1                        54                         132
  CLUS_2                        59                         150
  CLUS_3                         7                          23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(41) Variable = DEL PEAK  9(4P16.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(4P16.3) MUTATED        1      2      1      2
  DEL PEAK  9(4P16.3) WILD-TYPE      4      7     11      4
D41V1, multiclass
        clus
vv       DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE
  CLUS_1                           1                             4
  CLUS_2                           2                             7
  CLUS_3                           1                            11
  CLUS_4                           2                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(4P16.3) MUTATED        1      3      2
  DEL PEAK  9(4P16.3) WILD-TYPE     13      8      5
D41V2, multiclass
        clus
vv       DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE
  CLUS_1                           1                            13
  CLUS_2                           3                             8
  CLUS_3                           2                             5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(4P16.3) MUTATED       49     36     41
  DEL PEAK  9(4P16.3) WILD-TYPE    137    180     50
D41V3, multiclass
        clus
vv       DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE
  CLUS_1                          49                           137
  CLUS_2                          36                           180
  CLUS_3                          41                            50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(4P16.3) MUTATED        8     46     26     30
  DEL PEAK  9(4P16.3) WILD-TYPE     84     79     89     69
D41V4, multiclass
        clus
vv       DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE
  CLUS_1                           8                            84
  CLUS_2                          46                            79
  CLUS_3                          26                            89
  CLUS_4                          30                            69
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(4P16.3) MUTATED       25     18     26
  DEL PEAK  9(4P16.3) WILD-TYPE     69     50     47
D41V5, multiclass
        clus
vv       DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE
  CLUS_1                          25                            69
  CLUS_2                          18                            50
  CLUS_3                          26                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(4P16.3) MUTATED       32     14     23
  DEL PEAK  9(4P16.3) WILD-TYPE     80     57     29
D41V6, multiclass
        clus
vv       DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE
  CLUS_1                          32                            80
  CLUS_2                          14                            57
  CLUS_3                          23                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(4P16.3) MUTATED       35     12     20     45     13
  DEL PEAK  9(4P16.3) WILD-TYPE    103    100     56     61     41
D41V7, multiclass
        clus
vv       DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE
  CLUS_1                          35                           103
  CLUS_2                          12                           100
  CLUS_3                          20                            56
  CLUS_4                          45                            61
  CLUS_5                          13                            41
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  9(4P16.3) MUTATED       18      9      9     39      4     23
  DEL PEAK  9(4P16.3) WILD-TYPE     65     48     35     45     42     28
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK  9(4P16.3) MUTATED       11      2     10
  DEL PEAK  9(4P16.3) WILD-TYPE     38     16     44
D41V8, multiclass
        clus
vv       DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE
  CLUS_1                          18                            65
  CLUS_2                           9                            48
  CLUS_3                           9                            35
  CLUS_4                          39                            45
  CLUS_5                           4                            42
  CLUS_6                          23                            28
  CLUS_7                          11                            38
  CLUS_8                           2                            16
  CLUS_9                          10                            44
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(4P16.3) MUTATED       25     80     20
  DEL PEAK  9(4P16.3) WILD-TYPE    154    151     58
D41V9, multiclass
        clus
vv       DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE
  CLUS_1                          25                           154
  CLUS_2                          80                           151
  CLUS_3                          20                            58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  9(4P16.3) MUTATED        6     16     39     26     33      5
  DEL PEAK  9(4P16.3) WILD-TYPE     65     28     79    111     50     30
D41V10, multiclass
        clus
vv       DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE
  CLUS_1                           6                            65
  CLUS_2                          16                            28
  CLUS_3                          39                            79
  CLUS_4                          26                           111
  CLUS_5                          33                            50
  CLUS_6                           5                            30
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(4P16.3) MUTATED       26     60     23
  DEL PEAK  9(4P16.3) WILD-TYPE    129    132     55
D41V11, multiclass
        clus
vv       DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE
  CLUS_1                          26                           129
  CLUS_2                          60                           132
  CLUS_3                          23                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(4P16.3) MUTATED       33     72      4
  DEL PEAK  9(4P16.3) WILD-TYPE    153    137     26
D41V12, multiclass
        clus
vv       DEL PEAK  9(4P16.3) MUTATED DEL PEAK  9(4P16.3) WILD-TYPE
  CLUS_1                          33                           153
  CLUS_2                          72                           137
  CLUS_3                           4                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(42) Variable = DEL PEAK 10(4Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(4Q22.1) MUTATED        3      1      0      5
  DEL PEAK 10(4Q22.1) WILD-TYPE      2      8     12      1
D42V1, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                           3                             2
  CLUS_2                           1                             8
  CLUS_3                           0                            12
  CLUS_4                           5                             1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q22.1) MUTATED        1      2      6
  DEL PEAK 10(4Q22.1) WILD-TYPE     13      9      1
D42V2, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                           1                            13
  CLUS_2                           2                             9
  CLUS_3                           6                             1
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q22.1) MUTATED       64     44     46
  DEL PEAK 10(4Q22.1) WILD-TYPE    122    172     45
D42V3, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          64                           122
  CLUS_2                          44                           172
  CLUS_3                          46                            45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(4Q22.1) MUTATED        8     61     28     33
  DEL PEAK 10(4Q22.1) WILD-TYPE     84     64     87     66
D42V4, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                           8                            84
  CLUS_2                          61                            64
  CLUS_3                          28                            87
  CLUS_4                          33                            66
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q22.1) MUTATED       30     19     29
  DEL PEAK 10(4Q22.1) WILD-TYPE     64     49     44
D42V5, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          30                            64
  CLUS_2                          19                            49
  CLUS_3                          29                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q22.1) MUTATED       40     14     24
  DEL PEAK 10(4Q22.1) WILD-TYPE     72     57     28
D42V6, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          40                            72
  CLUS_2                          14                            57
  CLUS_3                          24                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(4Q22.1) MUTATED       40     15     31     52     14
  DEL PEAK 10(4Q22.1) WILD-TYPE     98     97     45     54     40
D42V7, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          40                            98
  CLUS_2                          15                            97
  CLUS_3                          31                            45
  CLUS_4                          52                            54
  CLUS_5                          14                            40
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 10(4Q22.1) MUTATED       21      8      6     43      6     29
  DEL PEAK 10(4Q22.1) WILD-TYPE     62     49     38     41     40     22
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 10(4Q22.1) MUTATED       25      1     13
  DEL PEAK 10(4Q22.1) WILD-TYPE     24     17     41
D42V8, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          21                            62
  CLUS_2                           8                            49
  CLUS_3                           6                            38
  CLUS_4                          43                            41
  CLUS_5                           6                            40
  CLUS_6                          29                            22
  CLUS_7                          25                            24
  CLUS_8                           1                            17
  CLUS_9                          13                            41
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q22.1) MUTATED       31     96     26
  DEL PEAK 10(4Q22.1) WILD-TYPE    148    135     52
D42V9, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          31                           148
  CLUS_2                          96                           135
  CLUS_3                          26                            52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 10(4Q22.1) MUTATED       11     17     47     27     42      9
  DEL PEAK 10(4Q22.1) WILD-TYPE     60     27     71    110     41     26
D42V10, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          11                            60
  CLUS_2                          17                            27
  CLUS_3                          47                            71
  CLUS_4                          27                           110
  CLUS_5                          42                            41
  CLUS_6                           9                            26
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q22.1) MUTATED       31     73     26
  DEL PEAK 10(4Q22.1) WILD-TYPE    124    119     52
D42V11, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          31                           124
  CLUS_2                          73                           119
  CLUS_3                          26                            52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4Q22.1) MUTATED       37     86      7
  DEL PEAK 10(4Q22.1) WILD-TYPE    149    123     23
D42V12, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          37                           149
  CLUS_2                          86                           123
  CLUS_3                           7                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(43) Variable = DEL PEAK 11(4Q35.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4Q35.1) MUTATED        3      1      1      5
  DEL PEAK 11(4Q35.1) WILD-TYPE      2      8     11      1
D43V1, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                           3                             2
  CLUS_2                           1                             8
  CLUS_3                           1                            11
  CLUS_4                           5                             1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q35.1) MUTATED        2      2      6
  DEL PEAK 11(4Q35.1) WILD-TYPE     12      9      1
D43V2, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                           2                            12
  CLUS_2                           2                             9
  CLUS_3                           6                             1
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q35.1) MUTATED       75     51     56
  DEL PEAK 11(4Q35.1) WILD-TYPE    111    165     35
D43V3, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          75                           111
  CLUS_2                          51                           165
  CLUS_3                          56                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4Q35.1) MUTATED        7     74     38     38
  DEL PEAK 11(4Q35.1) WILD-TYPE     85     51     77     61
D43V4, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                           7                            85
  CLUS_2                          74                            51
  CLUS_3                          38                            77
  CLUS_4                          38                            61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q35.1) MUTATED       37     21     38
  DEL PEAK 11(4Q35.1) WILD-TYPE     57     47     35
D43V5, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          37                            57
  CLUS_2                          21                            47
  CLUS_3                          38                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q35.1) MUTATED       47     16     33
  DEL PEAK 11(4Q35.1) WILD-TYPE     65     55     19
D43V6, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          47                            65
  CLUS_2                          16                            55
  CLUS_3                          33                            19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(4Q35.1) MUTATED       45     18     37     63     16
  DEL PEAK 11(4Q35.1) WILD-TYPE     93     94     39     43     38
D43V7, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          45                            93
  CLUS_2                          18                            94
  CLUS_3                          37                            39
  CLUS_4                          63                            43
  CLUS_5                          16                            38
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 11(4Q35.1) MUTATED       24      9      6     50      8     36
  DEL PEAK 11(4Q35.1) WILD-TYPE     59     48     38     34     38     15
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 11(4Q35.1) MUTATED       29      1     16
  DEL PEAK 11(4Q35.1) WILD-TYPE     20     17     38
D43V8, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          24                            59
  CLUS_2                           9                            48
  CLUS_3                           6                            38
  CLUS_4                          50                            34
  CLUS_5                           8                            38
  CLUS_6                          36                            15
  CLUS_7                          29                            20
  CLUS_8                           1                            17
  CLUS_9                          16                            38
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q35.1) MUTATED       40    118     23
  DEL PEAK 11(4Q35.1) WILD-TYPE    139    113     55
D43V9, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          40                           139
  CLUS_2                         118                           113
  CLUS_3                          23                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 11(4Q35.1) MUTATED       12     22     53     35     53      6
  DEL PEAK 11(4Q35.1) WILD-TYPE     59     22     65    102     30     29
D43V10, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          12                            59
  CLUS_2                          22                            22
  CLUS_3                          53                            65
  CLUS_4                          35                           102
  CLUS_5                          53                            30
  CLUS_6                           6                            29
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q35.1) MUTATED       40     95     22
  DEL PEAK 11(4Q35.1) WILD-TYPE    115     97     56
D43V11, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          40                           115
  CLUS_2                          95                            97
  CLUS_3                          22                            56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q35.1) MUTATED       43    109      5
  DEL PEAK 11(4Q35.1) WILD-TYPE    143    100     25
D43V12, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          43                           143
  CLUS_2                         109                           100
  CLUS_3                           5                            25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(44) Variable = DEL PEAK 12(5Q11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(5Q11.2) MUTATED        2      4      4      5
  DEL PEAK 12(5Q11.2) WILD-TYPE      3      5      8      1
D44V1, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                           2                             3
  CLUS_2                           4                             5
  CLUS_3                           4                             8
  CLUS_4                           5                             1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(5Q11.2) MUTATED        4      6      5
  DEL PEAK 12(5Q11.2) WILD-TYPE     10      5      2
D44V2, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                           4                            10
  CLUS_2                           6                             5
  CLUS_3                           5                             2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(5Q11.2) MUTATED       95     34     43
  DEL PEAK 12(5Q11.2) WILD-TYPE     91    182     48
D44V3, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          95                            91
  CLUS_2                          34                           182
  CLUS_3                          43                            48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(5Q11.2) MUTATED       12     63     39     31
  DEL PEAK 12(5Q11.2) WILD-TYPE     80     62     76     68
D44V4, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          12                            80
  CLUS_2                          63                            62
  CLUS_3                          39                            76
  CLUS_4                          31                            68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(5Q11.2) MUTATED       41     14     30
  DEL PEAK 12(5Q11.2) WILD-TYPE     53     54     43
D44V5, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          41                            53
  CLUS_2                          14                            54
  CLUS_3                          30                            43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(5Q11.2) MUTATED       46     15     24
  DEL PEAK 12(5Q11.2) WILD-TYPE     66     56     28
D44V6, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          46                            66
  CLUS_2                          15                            56
  CLUS_3                          24                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(5Q11.2) MUTATED       57     19     29     52     12
  DEL PEAK 12(5Q11.2) WILD-TYPE     81     93     47     54     42
D44V7, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          57                            81
  CLUS_2                          19                            93
  CLUS_3                          29                            47
  CLUS_4                          52                            54
  CLUS_5                          12                            42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 12(5Q11.2) MUTATED       30     11     13     46      6     24
  DEL PEAK 12(5Q11.2) WILD-TYPE     53     46     31     38     40     27
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 12(5Q11.2) MUTATED       24      1     14
  DEL PEAK 12(5Q11.2) WILD-TYPE     25     17     40
D44V8, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          30                            53
  CLUS_2                          11                            46
  CLUS_3                          13                            31
  CLUS_4                          46                            38
  CLUS_5                           6                            40
  CLUS_6                          24                            27
  CLUS_7                          24                            25
  CLUS_8                           1                            17
  CLUS_9                          14                            40
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(5Q11.2) MUTATED       33    112     24
  DEL PEAK 12(5Q11.2) WILD-TYPE    146    119     54
D44V9, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          33                           146
  CLUS_2                         112                           119
  CLUS_3                          24                            54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 12(5Q11.2) MUTATED       12     19     47     37     48      6
  DEL PEAK 12(5Q11.2) WILD-TYPE     59     25     71    100     35     29
D44V10, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          12                            59
  CLUS_2                          19                            25
  CLUS_3                          47                            71
  CLUS_4                          37                           100
  CLUS_5                          48                            35
  CLUS_6                           6                            29
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(5Q11.2) MUTATED       30     90     23
  DEL PEAK 12(5Q11.2) WILD-TYPE    125    102     55
D44V11, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          30                           125
  CLUS_2                          90                           102
  CLUS_3                          23                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(5Q11.2) MUTATED       33    103      7
  DEL PEAK 12(5Q11.2) WILD-TYPE    153    106     23
D44V12, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          33                           153
  CLUS_2                         103                           106
  CLUS_3                           7                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(45) Variable = DEL PEAK 13(5Q31.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(5Q31.1) MUTATED        1      4      3      5
  DEL PEAK 13(5Q31.1) WILD-TYPE      4      5      9      1
D45V1, multiclass
        clus
vv       DEL PEAK 13(5Q31.1) MUTATED DEL PEAK 13(5Q31.1) WILD-TYPE
  CLUS_1                           1                             4
  CLUS_2                           4                             5
  CLUS_3                           3                             9
  CLUS_4                           5                             1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(5Q31.1) MUTATED        4      4      5
  DEL PEAK 13(5Q31.1) WILD-TYPE     10      7      2
D45V2, multiclass
        clus
vv       DEL PEAK 13(5Q31.1) MUTATED DEL PEAK 13(5Q31.1) WILD-TYPE
  CLUS_1                           4                            10
  CLUS_2                           4                             7
  CLUS_3                           5                             2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(5Q31.1) MUTATED      102     45     52
  DEL PEAK 13(5Q31.1) WILD-TYPE     84    171     39
D45V3, multiclass
        clus
vv       DEL PEAK 13(5Q31.1) MUTATED DEL PEAK 13(5Q31.1) WILD-TYPE
  CLUS_1                         102                            84
  CLUS_2                          45                           171
  CLUS_3                          52                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(5Q31.1) MUTATED       14     70     49     39
  DEL PEAK 13(5Q31.1) WILD-TYPE     78     55     66     60
D45V4, multiclass
        clus
vv       DEL PEAK 13(5Q31.1) MUTATED DEL PEAK 13(5Q31.1) WILD-TYPE
  CLUS_1                          14                            78
  CLUS_2                          70                            55
  CLUS_3                          49                            66
  CLUS_4                          39                            60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(5Q31.1) MUTATED       44     19     38
  DEL PEAK 13(5Q31.1) WILD-TYPE     50     49     35
D45V5, multiclass
        clus
vv       DEL PEAK 13(5Q31.1) MUTATED DEL PEAK 13(5Q31.1) WILD-TYPE
  CLUS_1                          44                            50
  CLUS_2                          19                            49
  CLUS_3                          38                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(5Q31.1) MUTATED       50     19     32
  DEL PEAK 13(5Q31.1) WILD-TYPE     62     52     20
D45V6, multiclass
        clus
vv       DEL PEAK 13(5Q31.1) MUTATED DEL PEAK 13(5Q31.1) WILD-TYPE
  CLUS_1                          50                            62
  CLUS_2                          19                            52
  CLUS_3                          32                            20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(5Q31.1) MUTATED       66     23     33     59     15
  DEL PEAK 13(5Q31.1) WILD-TYPE     72     89     43     47     39
D45V7, multiclass
        clus
vv       DEL PEAK 13(5Q31.1) MUTATED DEL PEAK 13(5Q31.1) WILD-TYPE
  CLUS_1                          66                            72
  CLUS_2                          23                            89
  CLUS_3                          33                            43
  CLUS_4                          59                            47
  CLUS_5                          15                            39
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 13(5Q31.1) MUTATED       36     12     16     47     10     30
  DEL PEAK 13(5Q31.1) WILD-TYPE     47     45     28     37     36     21
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 13(5Q31.1) MUTATED       26      1     18
  DEL PEAK 13(5Q31.1) WILD-TYPE     23     17     36
D45V8, multiclass
        clus
vv       DEL PEAK 13(5Q31.1) MUTATED DEL PEAK 13(5Q31.1) WILD-TYPE
  CLUS_1                          36                            47
  CLUS_2                          12                            45
  CLUS_3                          16                            28
  CLUS_4                          47                            37
  CLUS_5                          10                            36
  CLUS_6                          30                            21
  CLUS_7                          26                            23
  CLUS_8                           1                            17
  CLUS_9                          18                            36
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(5Q31.1) MUTATED       43    127     26
  DEL PEAK 13(5Q31.1) WILD-TYPE    136    104     52
D45V9, multiclass
        clus
vv       DEL PEAK 13(5Q31.1) MUTATED DEL PEAK 13(5Q31.1) WILD-TYPE
  CLUS_1                          43                           136
  CLUS_2                         127                           104
  CLUS_3                          26                            52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 13(5Q31.1) MUTATED       19     20     57     40     53      7
  DEL PEAK 13(5Q31.1) WILD-TYPE     52     24     61     97     30     28
D45V10, multiclass
        clus
vv       DEL PEAK 13(5Q31.1) MUTATED DEL PEAK 13(5Q31.1) WILD-TYPE
  CLUS_1                          19                            52
  CLUS_2                          20                            24
  CLUS_3                          57                            61
  CLUS_4                          40                            97
  CLUS_5                          53                            30
  CLUS_6                           7                            28
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(5Q31.1) MUTATED       42    101     27
  DEL PEAK 13(5Q31.1) WILD-TYPE    113     91     51
D45V11, multiclass
        clus
vv       DEL PEAK 13(5Q31.1) MUTATED DEL PEAK 13(5Q31.1) WILD-TYPE
  CLUS_1                          42                           113
  CLUS_2                         101                            91
  CLUS_3                          27                            51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(5Q31.1) MUTATED       48    114      8
  DEL PEAK 13(5Q31.1) WILD-TYPE    138     95     22
D45V12, multiclass
        clus
vv       DEL PEAK 13(5Q31.1) MUTATED DEL PEAK 13(5Q31.1) WILD-TYPE
  CLUS_1                          48                           138
  CLUS_2                         114                            95
  CLUS_3                           8                            22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(46) Variable = DEL PEAK 14(6Q12) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(6Q12) MUTATED        3      3      3      3
  DEL PEAK 14(6Q12) WILD-TYPE      2      6      9      3
D46V1, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                         3                           2
  CLUS_2                         3                           6
  CLUS_3                         3                           9
  CLUS_4                         3                           3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(6Q12) MUTATED        5      3      4
  DEL PEAK 14(6Q12) WILD-TYPE      9      8      3
D46V2, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                         5                           9
  CLUS_2                         3                           8
  CLUS_3                         4                           3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(6Q12) MUTATED       69     66     39
  DEL PEAK 14(6Q12) WILD-TYPE    117    150     52
D46V3, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                        69                         117
  CLUS_2                        66                         150
  CLUS_3                        39                          52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(6Q12) MUTATED       34     43     51     27
  DEL PEAK 14(6Q12) WILD-TYPE     58     82     64     72
D46V4, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                        34                          58
  CLUS_2                        43                          82
  CLUS_3                        51                          64
  CLUS_4                        27                          72
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(6Q12) MUTATED       34     20     30
  DEL PEAK 14(6Q12) WILD-TYPE     60     48     43
D46V5, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                        34                          60
  CLUS_2                        20                          48
  CLUS_3                        30                          43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(6Q12) MUTATED       37     24     23
  DEL PEAK 14(6Q12) WILD-TYPE     75     47     29
D46V6, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                        37                          75
  CLUS_2                        24                          47
  CLUS_3                        23                          29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(6Q12) MUTATED       50     35     26     39     20
  DEL PEAK 14(6Q12) WILD-TYPE     88     77     50     67     34
D46V7, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                        50                          88
  CLUS_2                        35                          77
  CLUS_3                        26                          50
  CLUS_4                        39                          67
  CLUS_5                        20                          34
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 14(6Q12) MUTATED       28     19     19     20     21     23     18
  DEL PEAK 14(6Q12) WILD-TYPE     55     38     25     64     25     28     31
                             vv
clus                          CLUS_8 CLUS_9
  DEL PEAK 14(6Q12) MUTATED        5     17
  DEL PEAK 14(6Q12) WILD-TYPE     13     37
D46V8, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                        28                          55
  CLUS_2                        19                          38
  CLUS_3                        19                          25
  CLUS_4                        20                          64
  CLUS_5                        21                          25
  CLUS_6                        23                          28
  CLUS_7                        18                          31
  CLUS_8                         5                          13
  CLUS_9                        17                          37
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(6Q12) MUTATED       52     84     36
  DEL PEAK 14(6Q12) WILD-TYPE    127    147     42
D46V9, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                        52                         127
  CLUS_2                        84                         147
  CLUS_3                        36                          42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 14(6Q12) MUTATED       22     17     54     42     21     16
  DEL PEAK 14(6Q12) WILD-TYPE     49     27     64     95     62     19
D46V10, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                        22                          49
  CLUS_2                        17                          27
  CLUS_3                        54                          64
  CLUS_4                        42                          95
  CLUS_5                        21                          62
  CLUS_6                        16                          19
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(6Q12) MUTATED       52     71     30
  DEL PEAK 14(6Q12) WILD-TYPE    103    121     48
D46V11, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                        52                         103
  CLUS_2                        71                         121
  CLUS_3                        30                          48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(6Q12) MUTATED       60     79     14
  DEL PEAK 14(6Q12) WILD-TYPE    126    130     16
D46V12, multiclass
        clus
vv       DEL PEAK 14(6Q12) MUTATED DEL PEAK 14(6Q12) WILD-TYPE
  CLUS_1                        60                         126
  CLUS_2                        79                         130
  CLUS_3                        14                          16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(47) Variable = DEL PEAK 15(6Q22.31) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6Q22.31) MUTATED        3      4      6      5
  DEL PEAK 15(6Q22.31) WILD-TYPE      2      5      6      1
D47V1, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                            3                              2
  CLUS_2                            4                              5
  CLUS_3                            6                              6
  CLUS_4                            5                              1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6Q22.31) MUTATED        8      4      6
  DEL PEAK 15(6Q22.31) WILD-TYPE      6      7      1
D47V2, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                            8                              6
  CLUS_2                            4                              7
  CLUS_3                            6                              1
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6Q22.31) MUTATED      100     93     53
  DEL PEAK 15(6Q22.31) WILD-TYPE     86    123     38
D47V3, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                          100                             86
  CLUS_2                           93                            123
  CLUS_3                           53                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6Q22.31) MUTATED       48     66     75     30
  DEL PEAK 15(6Q22.31) WILD-TYPE     44     59     40     69
D47V4, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                           48                             44
  CLUS_2                           66                             59
  CLUS_3                           75                             40
  CLUS_4                           30                             69
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6Q22.31) MUTATED       42     36     38
  DEL PEAK 15(6Q22.31) WILD-TYPE     52     32     35
D47V5, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                           42                             52
  CLUS_2                           36                             32
  CLUS_3                           38                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6Q22.31) MUTATED       47     39     30
  DEL PEAK 15(6Q22.31) WILD-TYPE     65     32     22
D47V6, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                           47                             65
  CLUS_2                           39                             32
  CLUS_3                           30                             22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(6Q22.31) MUTATED       77     50     27     59     28
  DEL PEAK 15(6Q22.31) WILD-TYPE     61     62     49     47     26
D47V7, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                           77                             61
  CLUS_2                           50                             62
  CLUS_3                           27                             49
  CLUS_4                           59                             47
  CLUS_5                           28                             26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 15(6Q22.31) MUTATED       46     24     21     31     34     33
  DEL PEAK 15(6Q22.31) WILD-TYPE     37     33     23     53     12     18
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 15(6Q22.31) MUTATED       19      4     29
  DEL PEAK 15(6Q22.31) WILD-TYPE     30     14     25
D47V8, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                           46                             37
  CLUS_2                           24                             33
  CLUS_3                           21                             23
  CLUS_4                           31                             53
  CLUS_5                           34                             12
  CLUS_6                           33                             18
  CLUS_7                           19                             30
  CLUS_8                            4                             14
  CLUS_9                           29                             25
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6Q22.31) MUTATED       88    115     42
  DEL PEAK 15(6Q22.31) WILD-TYPE     91    116     36
D47V9, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                           88                             91
  CLUS_2                          115                            116
  CLUS_3                           42                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 15(6Q22.31) MUTATED       36     26     68     62     31     22
  DEL PEAK 15(6Q22.31) WILD-TYPE     35     18     50     75     52     13
D47V10, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                           36                             35
  CLUS_2                           26                             18
  CLUS_3                           68                             50
  CLUS_4                           62                             75
  CLUS_5                           31                             52
  CLUS_6                           22                             13
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6Q22.31) MUTATED       73    102     40
  DEL PEAK 15(6Q22.31) WILD-TYPE     82     90     38
D47V11, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                           73                             82
  CLUS_2                          102                             90
  CLUS_3                           40                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6Q22.31) MUTATED       88    108     19
  DEL PEAK 15(6Q22.31) WILD-TYPE     98    101     11
D47V12, multiclass
        clus
vv       DEL PEAK 15(6Q22.31) MUTATED DEL PEAK 15(6Q22.31) WILD-TYPE
  CLUS_1                           88                             98
  CLUS_2                          108                            101
  CLUS_3                           19                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(48) Variable = DEL PEAK 16(6Q26) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q26) MUTATED        3      6      5      5
  DEL PEAK 16(6Q26) WILD-TYPE      2      3      7      1
D48V1, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                         3                           2
  CLUS_2                         6                           3
  CLUS_3                         5                           7
  CLUS_4                         5                           1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q26) MUTATED        7      6      6
  DEL PEAK 16(6Q26) WILD-TYPE      7      5      1
D48V2, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                         7                           7
  CLUS_2                         6                           5
  CLUS_3                         6                           1
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q26) MUTATED      101     92     56
  DEL PEAK 16(6Q26) WILD-TYPE     85    124     35
D48V3, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                       101                          85
  CLUS_2                        92                         124
  CLUS_3                        56                          35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q26) MUTATED       46     69     68     33
  DEL PEAK 16(6Q26) WILD-TYPE     46     56     47     66
D48V4, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        46                          46
  CLUS_2                        69                          56
  CLUS_3                        68                          47
  CLUS_4                        33                          66
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q26) MUTATED       42     37     38
  DEL PEAK 16(6Q26) WILD-TYPE     52     31     35
D48V5, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        42                          52
  CLUS_2                        37                          31
  CLUS_3                        38                          35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q26) MUTATED       48     38     31
  DEL PEAK 16(6Q26) WILD-TYPE     64     33     21
D48V6, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        48                          64
  CLUS_2                        38                          33
  CLUS_3                        31                          21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(6Q26) MUTATED       80     49     32     57     27
  DEL PEAK 16(6Q26) WILD-TYPE     58     63     44     49     27
D48V7, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        80                          58
  CLUS_2                        49                          63
  CLUS_3                        32                          44
  CLUS_4                        57                          49
  CLUS_5                        27                          27
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 16(6Q26) MUTATED       46     24     24     33     32     31     23
  DEL PEAK 16(6Q26) WILD-TYPE     37     33     20     51     14     20     26
                             vv
clus                          CLUS_8 CLUS_9
  DEL PEAK 16(6Q26) MUTATED        4     28
  DEL PEAK 16(6Q26) WILD-TYPE     14     26
D48V8, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        46                          37
  CLUS_2                        24                          33
  CLUS_3                        24                          20
  CLUS_4                        33                          51
  CLUS_5                        32                          14
  CLUS_6                        31                          20
  CLUS_7                        23                          26
  CLUS_8                         4                          14
  CLUS_9                        28                          26
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q26) MUTATED       89    116     42
  DEL PEAK 16(6Q26) WILD-TYPE     90    115     36
D48V9, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        89                          90
  CLUS_2                       116                         115
  CLUS_3                        42                          36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 16(6Q26) MUTATED       34     24     71     64     32     22
  DEL PEAK 16(6Q26) WILD-TYPE     37     20     47     73     51     13
D48V10, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        34                          37
  CLUS_2                        24                          20
  CLUS_3                        71                          47
  CLUS_4                        64                          73
  CLUS_5                        32                          51
  CLUS_6                        22                          13
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q26) MUTATED       70    101     42
  DEL PEAK 16(6Q26) WILD-TYPE     85     91     36
D48V11, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        70                          85
  CLUS_2                       101                          91
  CLUS_3                        42                          36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q26) MUTATED       87    107     19
  DEL PEAK 16(6Q26) WILD-TYPE     99    102     11
D48V12, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        87                          99
  CLUS_2                       107                         102
  CLUS_3                        19                          11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(49) Variable = DEL PEAK 17(8P23.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(8P23.2) MUTATED        4      7      3      6
  DEL PEAK 17(8P23.2) WILD-TYPE      1      2      9      0
D49V1, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                           4                             1
  CLUS_2                           7                             2
  CLUS_3                           3                             9
  CLUS_4                           6                             0
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(8P23.2) MUTATED        5      8      7
  DEL PEAK 17(8P23.2) WILD-TYPE      9      3      0
D49V2, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                           5                             9
  CLUS_2                           8                             3
  CLUS_3                           7                             0
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(8P23.2) MUTATED      141     58     42
  DEL PEAK 17(8P23.2) WILD-TYPE     45    158     49
D49V3, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                         141                            45
  CLUS_2                          58                           158
  CLUS_3                          42                            49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(8P23.2) MUTATED       28     62     67     51
  DEL PEAK 17(8P23.2) WILD-TYPE     64     63     48     48
D49V4, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                          28                            64
  CLUS_2                          62                            63
  CLUS_3                          67                            48
  CLUS_4                          51                            48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(8P23.2) MUTATED       53     23     41
  DEL PEAK 17(8P23.2) WILD-TYPE     41     45     32
D49V5, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                          53                            41
  CLUS_2                          23                            45
  CLUS_3                          41                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(8P23.2) MUTATED       69     21     27
  DEL PEAK 17(8P23.2) WILD-TYPE     43     50     25
D49V6, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                          69                            43
  CLUS_2                          21                            50
  CLUS_3                          27                            25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(8P23.2) MUTATED       96     39     32     50     21
  DEL PEAK 17(8P23.2) WILD-TYPE     42     73     44     56     33
D49V7, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                          96                            42
  CLUS_2                          39                            73
  CLUS_3                          32                            44
  CLUS_4                          50                            56
  CLUS_5                          21                            33
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 17(8P23.2) MUTATED       49     22     31     56     10     20
  DEL PEAK 17(8P23.2) WILD-TYPE     34     35     13     28     36     31
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 17(8P23.2) MUTATED       24      2     24
  DEL PEAK 17(8P23.2) WILD-TYPE     25     16     30
D49V8, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                          49                            34
  CLUS_2                          22                            35
  CLUS_3                          31                            13
  CLUS_4                          56                            28
  CLUS_5                          10                            36
  CLUS_6                          20                            31
  CLUS_7                          24                            25
  CLUS_8                           2                            16
  CLUS_9                          24                            30
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(8P23.2) MUTATED       63    130     45
  DEL PEAK 17(8P23.2) WILD-TYPE    116    101     33
D49V9, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                          63                           116
  CLUS_2                         130                           101
  CLUS_3                          45                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 17(8P23.2) MUTATED       27     19     72     57     48     15
  DEL PEAK 17(8P23.2) WILD-TYPE     44     25     46     80     35     20
D49V10, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                          27                            44
  CLUS_2                          19                            25
  CLUS_3                          72                            46
  CLUS_4                          57                            80
  CLUS_5                          48                            35
  CLUS_6                          15                            20
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(8P23.2) MUTATED       57    109     38
  DEL PEAK 17(8P23.2) WILD-TYPE     98     83     40
D49V11, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                          57                            98
  CLUS_2                         109                            83
  CLUS_3                          38                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(8P23.2) MUTATED       70    119     15
  DEL PEAK 17(8P23.2) WILD-TYPE    116     90     15
D49V12, multiclass
        clus
vv       DEL PEAK 17(8P23.2) MUTATED DEL PEAK 17(8P23.2) WILD-TYPE
  CLUS_1                          70                           116
  CLUS_2                         119                            90
  CLUS_3                          15                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(50) Variable = DEL PEAK 18(8P12) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(8P12) MUTATED        4      6      3      4
  DEL PEAK 18(8P12) WILD-TYPE      1      3      9      2
D50V1, multiclass
        clus
vv       DEL PEAK 18(8P12) MUTATED DEL PEAK 18(8P12) WILD-TYPE
  CLUS_1                         4                           1
  CLUS_2                         6                           3
  CLUS_3                         3                           9
  CLUS_4                         4                           2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P12) MUTATED        5      7      5
  DEL PEAK 18(8P12) WILD-TYPE      9      4      2
D50V2, multiclass
        clus
vv       DEL PEAK 18(8P12) MUTATED DEL PEAK 18(8P12) WILD-TYPE
  CLUS_1                         5                           9
  CLUS_2                         7                           4
  CLUS_3                         5                           2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P12) MUTATED      129     51     35
  DEL PEAK 18(8P12) WILD-TYPE     57    165     56
D50V3, multiclass
        clus
vv       DEL PEAK 18(8P12) MUTATED DEL PEAK 18(8P12) WILD-TYPE
  CLUS_1                       129                          57
  CLUS_2                        51                         165
  CLUS_3                        35                          56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(8P12) MUTATED       23     57     64     46
  DEL PEAK 18(8P12) WILD-TYPE     69     68     51     53
D50V4, multiclass
        clus
vv       DEL PEAK 18(8P12) MUTATED DEL PEAK 18(8P12) WILD-TYPE
  CLUS_1                        23                          69
  CLUS_2                        57                          68
  CLUS_3                        64                          51
  CLUS_4                        46                          53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P12) MUTATED       47     21     36
  DEL PEAK 18(8P12) WILD-TYPE     47     47     37
D50V5, multiclass
        clus
vv       DEL PEAK 18(8P12) MUTATED DEL PEAK 18(8P12) WILD-TYPE
  CLUS_1                        47                          47
  CLUS_2                        21                          47
  CLUS_3                        36                          37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P12) MUTATED       58     20     26
  DEL PEAK 18(8P12) WILD-TYPE     54     51     26
D50V6, multiclass
        clus
vv       DEL PEAK 18(8P12) MUTATED DEL PEAK 18(8P12) WILD-TYPE
  CLUS_1                        58                          54
  CLUS_2                        20                          51
  CLUS_3                        26                          26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(8P12) MUTATED       89     35     29     44     16
  DEL PEAK 18(8P12) WILD-TYPE     49     77     47     62     38
D50V7, multiclass
        clus
vv       DEL PEAK 18(8P12) MUTATED DEL PEAK 18(8P12) WILD-TYPE
  CLUS_1                        89                          49
  CLUS_2                        35                          77
  CLUS_3                        29                          47
  CLUS_4                        44                          62
  CLUS_5                        16                          38
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 18(8P12) MUTATED       45     23     27     45     10     20     21
  DEL PEAK 18(8P12) WILD-TYPE     38     34     17     39     36     31     28
                             vv
clus                          CLUS_8 CLUS_9
  DEL PEAK 18(8P12) MUTATED        2     20
  DEL PEAK 18(8P12) WILD-TYPE     16     34
D50V8, multiclass
        clus
vv       DEL PEAK 18(8P12) MUTATED DEL PEAK 18(8P12) WILD-TYPE
  CLUS_1                        45                          38
  CLUS_2                        23                          34
  CLUS_3                        27                          17
  CLUS_4                        45                          39
  CLUS_5                        10                          36
  CLUS_6                        20                          31
  CLUS_7                        21                          28
  CLUS_8                         2                          16
  CLUS_9                        20                          34
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P12) MUTATED       57    120     35
  DEL PEAK 18(8P12) WILD-TYPE    122    111     43
D50V9, multiclass
        clus
vv       DEL PEAK 18(8P12) MUTATED DEL PEAK 18(8P12) WILD-TYPE
  CLUS_1                        57                         122
  CLUS_2                       120                         111
  CLUS_3                        35                          43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 18(8P12) MUTATED       24     18     67     49     40     14
  DEL PEAK 18(8P12) WILD-TYPE     47     26     51     88     43     21
D50V10, multiclass
        clus
vv       DEL PEAK 18(8P12) MUTATED DEL PEAK 18(8P12) WILD-TYPE
  CLUS_1                        24                          47
  CLUS_2                        18                          26
  CLUS_3                        67                          51
  CLUS_4                        49                          88
  CLUS_5                        40                          43
  CLUS_6                        14                          21
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P12) MUTATED       51    101     34
  DEL PEAK 18(8P12) WILD-TYPE    104     91     44
D50V11, multiclass
        clus
vv       DEL PEAK 18(8P12) MUTATED DEL PEAK 18(8P12) WILD-TYPE
  CLUS_1                        51                         104
  CLUS_2                       101                          91
  CLUS_3                        34                          44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P12) MUTATED       64    106     16
  DEL PEAK 18(8P12) WILD-TYPE    122    103     14
D50V12, multiclass
        clus
vv       DEL PEAK 18(8P12) MUTATED DEL PEAK 18(8P12) WILD-TYPE
  CLUS_1                        64                         122
  CLUS_2                       106                         103
  CLUS_3                        16                          14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(51) Variable = DEL PEAK 19(8P11.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(8P11.21) MUTATED        1      3      2      2
  DEL PEAK 19(8P11.21) WILD-TYPE      4      6     10      4
D51V1, multiclass
        clus
vv       DEL PEAK 19(8P11.21) MUTATED DEL PEAK 19(8P11.21) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            3                              6
  CLUS_3                            2                             10
  CLUS_4                            2                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(8P11.21) MUTATED        3      2      3
  DEL PEAK 19(8P11.21) WILD-TYPE     11      9      4
D51V2, multiclass
        clus
vv       DEL PEAK 19(8P11.21) MUTATED DEL PEAK 19(8P11.21) WILD-TYPE
  CLUS_1                            3                             11
  CLUS_2                            2                              9
  CLUS_3                            3                              4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(8P11.21) MUTATED       82     28      3
  DEL PEAK 19(8P11.21) WILD-TYPE    104    188     88
D51V3, multiclass
        clus
vv       DEL PEAK 19(8P11.21) MUTATED DEL PEAK 19(8P11.21) WILD-TYPE
  CLUS_1                           82                            104
  CLUS_2                           28                            188
  CLUS_3                            3                             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(8P11.21) MUTATED       15     27     32     25
  DEL PEAK 19(8P11.21) WILD-TYPE     77     98     83     74
D51V4, multiclass
        clus
vv       DEL PEAK 19(8P11.21) MUTATED DEL PEAK 19(8P11.21) WILD-TYPE
  CLUS_1                           15                             77
  CLUS_2                           27                             98
  CLUS_3                           32                             83
  CLUS_4                           25                             74
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(8P11.21) MUTATED       25     14     13
  DEL PEAK 19(8P11.21) WILD-TYPE     69     54     60
D51V5, multiclass
        clus
vv       DEL PEAK 19(8P11.21) MUTATED DEL PEAK 19(8P11.21) WILD-TYPE
  CLUS_1                           25                             69
  CLUS_2                           14                             54
  CLUS_3                           13                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(8P11.21) MUTATED       30     13      9
  DEL PEAK 19(8P11.21) WILD-TYPE     82     58     43
D51V6, multiclass
        clus
vv       DEL PEAK 19(8P11.21) MUTATED DEL PEAK 19(8P11.21) WILD-TYPE
  CLUS_1                           30                             82
  CLUS_2                           13                             58
  CLUS_3                            9                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 19(8P11.21) MUTATED       45     24     12     20     10
  DEL PEAK 19(8P11.21) WILD-TYPE     93     88     64     86     44
D51V7, multiclass
        clus
vv       DEL PEAK 19(8P11.21) MUTATED DEL PEAK 19(8P11.21) WILD-TYPE
  CLUS_1                           45                             93
  CLUS_2                           24                             88
  CLUS_3                           12                             64
  CLUS_4                           20                             86
  CLUS_5                           10                             44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 19(8P11.21) MUTATED       22     17     10     22      5     12
  DEL PEAK 19(8P11.21) WILD-TYPE     61     40     34     62     41     39
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 19(8P11.21) MUTATED       11      0     12
  DEL PEAK 19(8P11.21) WILD-TYPE     38     18     42
D51V8, multiclass
        clus
vv       DEL PEAK 19(8P11.21) MUTATED DEL PEAK 19(8P11.21) WILD-TYPE
  CLUS_1                           22                             61
  CLUS_2                           17                             40
  CLUS_3                           10                             34
  CLUS_4                           22                             62
  CLUS_5                            5                             41
  CLUS_6                           12                             39
  CLUS_7                           11                             38
  CLUS_8                            0                             18
  CLUS_9                           12                             42
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(8P11.21) MUTATED       34     55     21
  DEL PEAK 19(8P11.21) WILD-TYPE    145    176     57
D51V9, multiclass
        clus
vv       DEL PEAK 19(8P11.21) MUTATED DEL PEAK 19(8P11.21) WILD-TYPE
  CLUS_1                           34                            145
  CLUS_2                           55                            176
  CLUS_3                           21                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 19(8P11.21) MUTATED       17     11     31     26     15     10
  DEL PEAK 19(8P11.21) WILD-TYPE     54     33     87    111     68     25
D51V10, multiclass
        clus
vv       DEL PEAK 19(8P11.21) MUTATED DEL PEAK 19(8P11.21) WILD-TYPE
  CLUS_1                           17                             54
  CLUS_2                           11                             33
  CLUS_3                           31                             87
  CLUS_4                           26                            111
  CLUS_5                           15                             68
  CLUS_6                           10                             25
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(8P11.21) MUTATED       31     42     23
  DEL PEAK 19(8P11.21) WILD-TYPE    124    150     55
D51V11, multiclass
        clus
vv       DEL PEAK 19(8P11.21) MUTATED DEL PEAK 19(8P11.21) WILD-TYPE
  CLUS_1                           31                            124
  CLUS_2                           42                            150
  CLUS_3                           23                             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(8P11.21) MUTATED       38     48     10
  DEL PEAK 19(8P11.21) WILD-TYPE    148    161     20
D51V12, multiclass
        clus
vv       DEL PEAK 19(8P11.21) MUTATED DEL PEAK 19(8P11.21) WILD-TYPE
  CLUS_1                           38                            148
  CLUS_2                           48                            161
  CLUS_3                           10                             20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(52) Variable = DEL PEAK 20(8Q11.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(8Q11.21) MUTATED        0      1      1      1
  DEL PEAK 20(8Q11.21) WILD-TYPE      5      8     11      5
D52V1, multiclass
        clus
vv       DEL PEAK 20(8Q11.21) MUTATED DEL PEAK 20(8Q11.21) WILD-TYPE
  CLUS_1                            0                              5
  CLUS_2                            1                              8
  CLUS_3                            1                             11
  CLUS_4                            1                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8Q11.21) MUTATED        1      1      1
  DEL PEAK 20(8Q11.21) WILD-TYPE     13     10      6
D52V2, multiclass
        clus
vv       DEL PEAK 20(8Q11.21) MUTATED DEL PEAK 20(8Q11.21) WILD-TYPE
  CLUS_1                            1                             13
  CLUS_2                            1                             10
  CLUS_3                            1                              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8Q11.21) MUTATED       34     23      6
  DEL PEAK 20(8Q11.21) WILD-TYPE    152    193     85
D52V3, multiclass
        clus
vv       DEL PEAK 20(8Q11.21) MUTATED DEL PEAK 20(8Q11.21) WILD-TYPE
  CLUS_1                           34                            152
  CLUS_2                           23                            193
  CLUS_3                            6                             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(8Q11.21) MUTATED       11     16     13     17
  DEL PEAK 20(8Q11.21) WILD-TYPE     81    109    102     82
D52V4, multiclass
        clus
vv       DEL PEAK 20(8Q11.21) MUTATED DEL PEAK 20(8Q11.21) WILD-TYPE
  CLUS_1                           11                             81
  CLUS_2                           16                            109
  CLUS_3                           13                            102
  CLUS_4                           17                             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8Q11.21) MUTATED       16      7      8
  DEL PEAK 20(8Q11.21) WILD-TYPE     78     61     65
D52V5, multiclass
        clus
vv       DEL PEAK 20(8Q11.21) MUTATED DEL PEAK 20(8Q11.21) WILD-TYPE
  CLUS_1                           16                             78
  CLUS_2                            7                             61
  CLUS_3                            8                             65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8Q11.21) MUTATED       18      6      7
  DEL PEAK 20(8Q11.21) WILD-TYPE     94     65     45
D52V6, multiclass
        clus
vv       DEL PEAK 20(8Q11.21) MUTATED DEL PEAK 20(8Q11.21) WILD-TYPE
  CLUS_1                           18                             94
  CLUS_2                            6                             65
  CLUS_3                            7                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 20(8Q11.21) MUTATED       23     11      8     15      4
  DEL PEAK 20(8Q11.21) WILD-TYPE    115    101     68     91     50
D52V7, multiclass
        clus
vv       DEL PEAK 20(8Q11.21) MUTATED DEL PEAK 20(8Q11.21) WILD-TYPE
  CLUS_1                           23                            115
  CLUS_2                           11                            101
  CLUS_3                            8                             68
  CLUS_4                           15                             91
  CLUS_5                            4                             50
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 20(8Q11.21) MUTATED       11      8      3     18      3      6
  DEL PEAK 20(8Q11.21) WILD-TYPE     72     49     41     66     43     45
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 20(8Q11.21) MUTATED        6      0      6
  DEL PEAK 20(8Q11.21) WILD-TYPE     43     18     48
D52V8, multiclass
        clus
vv       DEL PEAK 20(8Q11.21) MUTATED DEL PEAK 20(8Q11.21) WILD-TYPE
  CLUS_1                           11                             72
  CLUS_2                            8                             49
  CLUS_3                            3                             41
  CLUS_4                           18                             66
  CLUS_5                            3                             43
  CLUS_6                            6                             45
  CLUS_7                            6                             43
  CLUS_8                            0                             18
  CLUS_9                            6                             48
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8Q11.21) MUTATED       18     30     13
  DEL PEAK 20(8Q11.21) WILD-TYPE    161    201     65
D52V9, multiclass
        clus
vv       DEL PEAK 20(8Q11.21) MUTATED DEL PEAK 20(8Q11.21) WILD-TYPE
  CLUS_1                           18                            161
  CLUS_2                           30                            201
  CLUS_3                           13                             65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 20(8Q11.21) MUTATED        7      6     14     16     14      4
  DEL PEAK 20(8Q11.21) WILD-TYPE     64     38    104    121     69     31
D52V10, multiclass
        clus
vv       DEL PEAK 20(8Q11.21) MUTATED DEL PEAK 20(8Q11.21) WILD-TYPE
  CLUS_1                            7                             64
  CLUS_2                            6                             38
  CLUS_3                           14                            104
  CLUS_4                           16                            121
  CLUS_5                           14                             69
  CLUS_6                            4                             31
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8Q11.21) MUTATED       20     25     11
  DEL PEAK 20(8Q11.21) WILD-TYPE    135    167     67
D52V11, multiclass
        clus
vv       DEL PEAK 20(8Q11.21) MUTATED DEL PEAK 20(8Q11.21) WILD-TYPE
  CLUS_1                           20                            135
  CLUS_2                           25                            167
  CLUS_3                           11                             67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8Q11.21) MUTATED       21     31      4
  DEL PEAK 20(8Q11.21) WILD-TYPE    165    178     26
D52V12, multiclass
        clus
vv       DEL PEAK 20(8Q11.21) MUTATED DEL PEAK 20(8Q11.21) WILD-TYPE
  CLUS_1                           21                            165
  CLUS_2                           31                            178
  CLUS_3                            4                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(53) Variable = DEL PEAK 21(9P23) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(9P23) MUTATED        2      5      8      5
  DEL PEAK 21(9P23) WILD-TYPE      3      4      4      1
D53V1, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                         2                           3
  CLUS_2                         5                           4
  CLUS_3                         8                           4
  CLUS_4                         5                           1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9P23) MUTATED        9      6      5
  DEL PEAK 21(9P23) WILD-TYPE      5      5      2
D53V2, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                         9                           5
  CLUS_2                         6                           5
  CLUS_3                         5                           2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9P23) MUTATED      116    103     52
  DEL PEAK 21(9P23) WILD-TYPE     70    113     39
D53V3, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                       116                          70
  CLUS_2                       103                         113
  CLUS_3                        52                          39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(9P23) MUTATED       47     74     61     51
  DEL PEAK 21(9P23) WILD-TYPE     45     51     54     48
D53V4, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        47                          45
  CLUS_2                        74                          51
  CLUS_3                        61                          54
  CLUS_4                        51                          48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9P23) MUTATED       52     33     42
  DEL PEAK 21(9P23) WILD-TYPE     42     35     31
D53V5, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        52                          42
  CLUS_2                        33                          35
  CLUS_3                        42                          31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9P23) MUTATED       62     33     32
  DEL PEAK 21(9P23) WILD-TYPE     50     38     20
D53V6, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        62                          50
  CLUS_2                        33                          38
  CLUS_3                        32                          20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 21(9P23) MUTATED       67     59     57     57     28
  DEL PEAK 21(9P23) WILD-TYPE     71     53     19     49     26
D53V7, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        67                          71
  CLUS_2                        59                          53
  CLUS_3                        57                          19
  CLUS_4                        57                          49
  CLUS_5                        28                          26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 21(9P23) MUTATED       41     31     19     54     22     26     42
  DEL PEAK 21(9P23) WILD-TYPE     42     26     25     30     24     25      7
                             vv
clus                          CLUS_8 CLUS_9
  DEL PEAK 21(9P23) MUTATED       10     23
  DEL PEAK 21(9P23) WILD-TYPE      8     31
D53V8, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        41                          42
  CLUS_2                        31                          26
  CLUS_3                        19                          25
  CLUS_4                        54                          30
  CLUS_5                        22                          24
  CLUS_6                        26                          25
  CLUS_7                        42                           7
  CLUS_8                        10                           8
  CLUS_9                        23                          31
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9P23) MUTATED       92    127     48
  DEL PEAK 21(9P23) WILD-TYPE     87    104     30
D53V9, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        92                          87
  CLUS_2                       127                         104
  CLUS_3                        48                          30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 21(9P23) MUTATED       34     26     62     69     55     21
  DEL PEAK 21(9P23) WILD-TYPE     37     18     56     68     28     14
D53V10, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        34                          37
  CLUS_2                        26                          18
  CLUS_3                        62                          56
  CLUS_4                        69                          68
  CLUS_5                        55                          28
  CLUS_6                        21                          14
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9P23) MUTATED       82    101     47
  DEL PEAK 21(9P23) WILD-TYPE     73     91     31
D53V11, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        82                          73
  CLUS_2                       101                          91
  CLUS_3                        47                          31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9P23) MUTATED       97    117     16
  DEL PEAK 21(9P23) WILD-TYPE     89     92     14
D53V12, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        97                          89
  CLUS_2                       117                          92
  CLUS_3                        16                          14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(54) Variable = DEL PEAK 22(9P21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(9P21.3) MUTATED        2      5      8      5
  DEL PEAK 22(9P21.3) WILD-TYPE      3      4      4      1
D54V1, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                           2                             3
  CLUS_2                           5                             4
  CLUS_3                           8                             4
  CLUS_4                           5                             1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P21.3) MUTATED        9      6      5
  DEL PEAK 22(9P21.3) WILD-TYPE      5      5      2
D54V2, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                           9                             5
  CLUS_2                           6                             5
  CLUS_3                           5                             2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P21.3) MUTATED      122    106     50
  DEL PEAK 22(9P21.3) WILD-TYPE     64    110     41
D54V3, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                         122                            64
  CLUS_2                         106                           110
  CLUS_3                          50                            41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(9P21.3) MUTATED       45     75     65     51
  DEL PEAK 22(9P21.3) WILD-TYPE     47     50     50     48
D54V4, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          45                            47
  CLUS_2                          75                            50
  CLUS_3                          65                            50
  CLUS_4                          51                            48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P21.3) MUTATED       57     33     45
  DEL PEAK 22(9P21.3) WILD-TYPE     37     35     28
D54V5, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          57                            37
  CLUS_2                          33                            35
  CLUS_3                          45                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P21.3) MUTATED       68     33     34
  DEL PEAK 22(9P21.3) WILD-TYPE     44     38     18
D54V6, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          68                            44
  CLUS_2                          33                            38
  CLUS_3                          34                            18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 22(9P21.3) MUTATED       73     60     64     51     27
  DEL PEAK 22(9P21.3) WILD-TYPE     65     52     12     55     27
D54V7, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          73                            65
  CLUS_2                          60                            52
  CLUS_3                          64                            12
  CLUS_4                          51                            55
  CLUS_5                          27                            27
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 22(9P21.3) MUTATED       43     33     21     54     22     24
  DEL PEAK 22(9P21.3) WILD-TYPE     40     24     23     30     24     27
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 22(9P21.3) MUTATED       44     11     23
  DEL PEAK 22(9P21.3) WILD-TYPE      5      7     31
D54V8, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          43                            40
  CLUS_2                          33                            24
  CLUS_3                          21                            23
  CLUS_4                          54                            30
  CLUS_5                          22                            24
  CLUS_6                          24                            27
  CLUS_7                          44                             5
  CLUS_8                          11                             7
  CLUS_9                          23                            31
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P21.3) MUTATED       96    128     51
  DEL PEAK 22(9P21.3) WILD-TYPE     83    103     27
D54V9, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          96                            83
  CLUS_2                         128                           103
  CLUS_3                          51                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 22(9P21.3) MUTATED       34     25     60     74     60     22
  DEL PEAK 22(9P21.3) WILD-TYPE     37     19     58     63     23     13
D54V10, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          34                            37
  CLUS_2                          25                            19
  CLUS_3                          60                            58
  CLUS_4                          74                            63
  CLUS_5                          60                            23
  CLUS_6                          22                            13
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P21.3) MUTATED       85    102     47
  DEL PEAK 22(9P21.3) WILD-TYPE     70     90     31
D54V11, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          85                            70
  CLUS_2                         102                            90
  CLUS_3                          47                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P21.3) MUTATED       99    119     16
  DEL PEAK 22(9P21.3) WILD-TYPE     87     90     14
D54V12, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          99                            87
  CLUS_2                         119                            90
  CLUS_3                          16                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(55) Variable = DEL PEAK 23(9Q21.11) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9Q21.11) MUTATED        0      6      6      5
  DEL PEAK 23(9Q21.11) WILD-TYPE      5      3      6      1
D55V1, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                            0                              5
  CLUS_2                            6                              3
  CLUS_3                            6                              6
  CLUS_4                            5                              1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9Q21.11) MUTATED        6      6      5
  DEL PEAK 23(9Q21.11) WILD-TYPE      8      5      2
D55V2, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                            6                              8
  CLUS_2                            6                              5
  CLUS_3                            5                              2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9Q21.11) MUTATED      100     82     64
  DEL PEAK 23(9Q21.11) WILD-TYPE     86    134     27
D55V3, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                          100                             86
  CLUS_2                           82                            134
  CLUS_3                           64                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9Q21.11) MUTATED       37     80     46     48
  DEL PEAK 23(9Q21.11) WILD-TYPE     55     45     69     51
D55V4, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           37                             55
  CLUS_2                           80                             45
  CLUS_3                           46                             69
  CLUS_4                           48                             51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9Q21.11) MUTATED       49     28     39
  DEL PEAK 23(9Q21.11) WILD-TYPE     45     40     34
D55V5, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           49                             45
  CLUS_2                           28                             40
  CLUS_3                           39                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9Q21.11) MUTATED       62     23     31
  DEL PEAK 23(9Q21.11) WILD-TYPE     50     48     21
D55V6, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           62                             50
  CLUS_2                           23                             48
  CLUS_3                           31                             21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 23(9Q21.11) MUTATED       64     44     41     69     26
  DEL PEAK 23(9Q21.11) WILD-TYPE     74     68     35     37     28
D55V7, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           64                             74
  CLUS_2                           44                             68
  CLUS_3                           41                             35
  CLUS_4                           69                             37
  CLUS_5                           26                             28
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 23(9Q21.11) MUTATED       34     27     19     52     15     37
  DEL PEAK 23(9Q21.11) WILD-TYPE     49     30     25     32     31     14
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 23(9Q21.11) MUTATED       32      4     24
  DEL PEAK 23(9Q21.11) WILD-TYPE     17     14     30
D55V8, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           34                             49
  CLUS_2                           27                             30
  CLUS_3                           19                             25
  CLUS_4                           52                             32
  CLUS_5                           15                             31
  CLUS_6                           37                             14
  CLUS_7                           32                             17
  CLUS_8                            4                             14
  CLUS_9                           24                             30
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9Q21.11) MUTATED       67    128     48
  DEL PEAK 23(9Q21.11) WILD-TYPE    112    103     30
D55V9, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           67                            112
  CLUS_2                          128                            103
  CLUS_3                           48                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 23(9Q21.11) MUTATED       26     28     60     53     58     18
  DEL PEAK 23(9Q21.11) WILD-TYPE     45     16     58     84     25     17
D55V10, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           26                             45
  CLUS_2                           28                             16
  CLUS_3                           60                             58
  CLUS_4                           53                             84
  CLUS_5                           58                             25
  CLUS_6                           18                             17
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9Q21.11) MUTATED       62    104     43
  DEL PEAK 23(9Q21.11) WILD-TYPE     93     88     35
D55V11, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           62                             93
  CLUS_2                          104                             88
  CLUS_3                           43                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9Q21.11) MUTATED       72    121     16
  DEL PEAK 23(9Q21.11) WILD-TYPE    114     88     14
D55V12, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           72                            114
  CLUS_2                          121                             88
  CLUS_3                           16                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(56) Variable = DEL PEAK 24(10P15.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P15.3) MUTATED        1      2      2      1
  DEL PEAK 24(10P15.3) WILD-TYPE      4      7     10      5
D56V1, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            2                              7
  CLUS_3                            2                             10
  CLUS_4                            1                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED        2      3      1
  DEL PEAK 24(10P15.3) WILD-TYPE     12      8      6
D56V2, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                            2                             12
  CLUS_2                            3                              8
  CLUS_3                            1                              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       62     33     27
  DEL PEAK 24(10P15.3) WILD-TYPE    124    183     64
D56V3, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           62                            124
  CLUS_2                           33                            183
  CLUS_3                           27                             64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P15.3) MUTATED       20     42     27     17
  DEL PEAK 24(10P15.3) WILD-TYPE     72     83     88     82
D56V4, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           20                             72
  CLUS_2                           42                             83
  CLUS_3                           27                             88
  CLUS_4                           17                             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       25     13     19
  DEL PEAK 24(10P15.3) WILD-TYPE     69     55     54
D56V5, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           25                             69
  CLUS_2                           13                             55
  CLUS_3                           19                             54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       33     13     11
  DEL PEAK 24(10P15.3) WILD-TYPE     79     58     41
D56V6, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           33                             79
  CLUS_2                           13                             58
  CLUS_3                           11                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 24(10P15.3) MUTATED       43     18     11     32     16
  DEL PEAK 24(10P15.3) WILD-TYPE     95     94     65     74     38
D56V7, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           43                             95
  CLUS_2                           18                             94
  CLUS_3                           11                             65
  CLUS_4                           32                             74
  CLUS_5                           16                             38
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 24(10P15.3) MUTATED       19     14      8     37      5     16
  DEL PEAK 24(10P15.3) WILD-TYPE     64     43     36     47     41     35
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 24(10P15.3) MUTATED        7      3     11
  DEL PEAK 24(10P15.3) WILD-TYPE     42     15     43
D56V8, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           19                             64
  CLUS_2                           14                             43
  CLUS_3                            8                             36
  CLUS_4                           37                             47
  CLUS_5                            5                             41
  CLUS_6                           16                             35
  CLUS_7                            7                             42
  CLUS_8                            3                             15
  CLUS_9                           11                             43
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       32     59     30
  DEL PEAK 24(10P15.3) WILD-TYPE    147    172     48
D56V9, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           32                            147
  CLUS_2                           59                            172
  CLUS_3                           30                             48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 24(10P15.3) MUTATED        9     13     20     31     31     17
  DEL PEAK 24(10P15.3) WILD-TYPE     62     31     98    106     52     18
D56V10, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                            9                             62
  CLUS_2                           13                             31
  CLUS_3                           20                             98
  CLUS_4                           31                            106
  CLUS_5                           31                             52
  CLUS_6                           17                             18
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       24     52     30
  DEL PEAK 24(10P15.3) WILD-TYPE    131    140     48
D56V11, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           24                            131
  CLUS_2                           52                            140
  CLUS_3                           30                             48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       32     59     15
  DEL PEAK 24(10P15.3) WILD-TYPE    154    150     15
D56V12, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           32                            154
  CLUS_2                           59                            150
  CLUS_3                           15                             15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(57) Variable = DEL PEAK 25(10Q26.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10Q26.3) MUTATED        2      4      3      1
  DEL PEAK 25(10Q26.3) WILD-TYPE      3      5      9      5
D57V1, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                            2                              3
  CLUS_2                            4                              5
  CLUS_3                            3                              9
  CLUS_4                            1                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10Q26.3) MUTATED        4      5      1
  DEL PEAK 25(10Q26.3) WILD-TYPE     10      6      6
D57V2, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                            4                             10
  CLUS_2                            5                              6
  CLUS_3                            1                              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10Q26.3) MUTATED       77     36     29
  DEL PEAK 25(10Q26.3) WILD-TYPE    109    180     62
D57V3, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                           77                            109
  CLUS_2                           36                            180
  CLUS_3                           29                             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10Q26.3) MUTATED       16     44     37     24
  DEL PEAK 25(10Q26.3) WILD-TYPE     76     81     78     75
D57V4, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                           16                             76
  CLUS_2                           44                             81
  CLUS_3                           37                             78
  CLUS_4                           24                             75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10Q26.3) MUTATED       39     13     18
  DEL PEAK 25(10Q26.3) WILD-TYPE     55     55     55
D57V5, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                           39                             55
  CLUS_2                           13                             55
  CLUS_3                           18                             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10Q26.3) MUTATED       46     12     12
  DEL PEAK 25(10Q26.3) WILD-TYPE     66     59     40
D57V6, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                           46                             66
  CLUS_2                           12                             59
  CLUS_3                           12                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 25(10Q26.3) MUTATED       59     19     13     34     16
  DEL PEAK 25(10Q26.3) WILD-TYPE     79     93     63     72     38
D57V7, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                           59                             79
  CLUS_2                           19                             93
  CLUS_3                           13                             63
  CLUS_4                           34                             72
  CLUS_5                           16                             38
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 25(10Q26.3) MUTATED       30     16     15     43      1     11
  DEL PEAK 25(10Q26.3) WILD-TYPE     53     41     29     41     45     40
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 25(10Q26.3) MUTATED        9      2     14
  DEL PEAK 25(10Q26.3) WILD-TYPE     40     16     40
D57V8, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                           30                             53
  CLUS_2                           16                             41
  CLUS_3                           15                             29
  CLUS_4                           43                             41
  CLUS_5                            1                             45
  CLUS_6                           11                             40
  CLUS_7                            9                             40
  CLUS_8                            2                             16
  CLUS_9                           14                             40
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10Q26.3) MUTATED       36     76     28
  DEL PEAK 25(10Q26.3) WILD-TYPE    143    155     50
D57V9, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                           36                            143
  CLUS_2                           76                            155
  CLUS_3                           28                             50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 25(10Q26.3) MUTATED       10      9     31     33     40     17
  DEL PEAK 25(10Q26.3) WILD-TYPE     61     35     87    104     43     18
D57V10, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                           10                             61
  CLUS_2                            9                             35
  CLUS_3                           31                             87
  CLUS_4                           33                            104
  CLUS_5                           40                             43
  CLUS_6                           17                             18
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10Q26.3) MUTATED       25     61     34
  DEL PEAK 25(10Q26.3) WILD-TYPE    130    131     44
D57V11, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                           25                            130
  CLUS_2                           61                            131
  CLUS_3                           34                             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10Q26.3) MUTATED       35     71     14
  DEL PEAK 25(10Q26.3) WILD-TYPE    151    138     16
D57V12, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                           35                            151
  CLUS_2                           71                            138
  CLUS_3                           14                             16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(58) Variable = DEL PEAK 26(11P15.5) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(11P15.5) MUTATED        1      2      1      3
  DEL PEAK 26(11P15.5) WILD-TYPE      4      7     11      3
D58V1, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            2                              7
  CLUS_3                            1                             11
  CLUS_4                            3                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(11P15.5) MUTATED        1      2      4
  DEL PEAK 26(11P15.5) WILD-TYPE     13      9      3
D58V2, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                            1                             13
  CLUS_2                            2                              9
  CLUS_3                            4                              3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(11P15.5) MUTATED       72     34     29
  DEL PEAK 26(11P15.5) WILD-TYPE    114    182     62
D58V3, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           72                            114
  CLUS_2                           34                            182
  CLUS_3                           29                             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(11P15.5) MUTATED       15     46     36     20
  DEL PEAK 26(11P15.5) WILD-TYPE     77     79     79     79
D58V4, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           15                             77
  CLUS_2                           46                             79
  CLUS_3                           36                             79
  CLUS_4                           20                             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(11P15.5) MUTATED       23     12     29
  DEL PEAK 26(11P15.5) WILD-TYPE     71     56     44
D58V5, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           23                             71
  CLUS_2                           12                             56
  CLUS_3                           29                             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(11P15.5) MUTATED       32     10     22
  DEL PEAK 26(11P15.5) WILD-TYPE     80     61     30
D58V6, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           32                             80
  CLUS_2                           10                             61
  CLUS_3                           22                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 26(11P15.5) MUTATED       45     13     24     35     14
  DEL PEAK 26(11P15.5) WILD-TYPE     93     99     52     71     40
D58V7, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           45                             93
  CLUS_2                           13                             99
  CLUS_3                           24                             52
  CLUS_4                           35                             71
  CLUS_5                           14                             40
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 26(11P15.5) MUTATED       23      6     11     34      8     13
  DEL PEAK 26(11P15.5) WILD-TYPE     60     51     33     50     38     38
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 26(11P15.5) MUTATED       23      0     13
  DEL PEAK 26(11P15.5) WILD-TYPE     26     18     41
D58V8, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           23                             60
  CLUS_2                            6                             51
  CLUS_3                           11                             33
  CLUS_4                           34                             50
  CLUS_5                            8                             38
  CLUS_6                           13                             38
  CLUS_7                           23                             26
  CLUS_8                            0                             18
  CLUS_9                           13                             41
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(11P15.5) MUTATED       33     84     16
  DEL PEAK 26(11P15.5) WILD-TYPE    146    147     62
D58V9, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           33                            146
  CLUS_2                           84                            147
  CLUS_3                           16                             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 26(11P15.5) MUTATED       12     10     51     27     30      3
  DEL PEAK 26(11P15.5) WILD-TYPE     59     34     67    110     53     32
D58V10, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           12                             59
  CLUS_2                           10                             34
  CLUS_3                           51                             67
  CLUS_4                           27                            110
  CLUS_5                           30                             53
  CLUS_6                            3                             32
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(11P15.5) MUTATED       27     75     14
  DEL PEAK 26(11P15.5) WILD-TYPE    128    117     64
D58V11, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           27                            128
  CLUS_2                           75                            117
  CLUS_3                           14                             64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(11P15.5) MUTATED       38     77      1
  DEL PEAK 26(11P15.5) WILD-TYPE    148    132     29
D58V12, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           38                            148
  CLUS_2                           77                            132
  CLUS_3                            1                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(59) Variable = DEL PEAK 27(11Q23.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(11Q23.2) MUTATED        2      2      1      1
  DEL PEAK 27(11Q23.2) WILD-TYPE      3      7     11      5
D59V1, multiclass
        clus
vv       DEL PEAK 27(11Q23.2) MUTATED DEL PEAK 27(11Q23.2) WILD-TYPE
  CLUS_1                            2                              3
  CLUS_2                            2                              7
  CLUS_3                            1                             11
  CLUS_4                            1                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11Q23.2) MUTATED        2      2      2
  DEL PEAK 27(11Q23.2) WILD-TYPE     12      9      5
D59V2, multiclass
        clus
vv       DEL PEAK 27(11Q23.2) MUTATED DEL PEAK 27(11Q23.2) WILD-TYPE
  CLUS_1                            2                             12
  CLUS_2                            2                              9
  CLUS_3                            2                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11Q23.2) MUTATED       41     36     39
  DEL PEAK 27(11Q23.2) WILD-TYPE    145    180     52
D59V3, multiclass
        clus
vv       DEL PEAK 27(11Q23.2) MUTATED DEL PEAK 27(11Q23.2) WILD-TYPE
  CLUS_1                           41                            145
  CLUS_2                           36                            180
  CLUS_3                           39                             52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(11Q23.2) MUTATED       11     44     29     17
  DEL PEAK 27(11Q23.2) WILD-TYPE     81     81     86     82
D59V4, multiclass
        clus
vv       DEL PEAK 27(11Q23.2) MUTATED DEL PEAK 27(11Q23.2) WILD-TYPE
  CLUS_1                           11                             81
  CLUS_2                           44                             81
  CLUS_3                           29                             86
  CLUS_4                           17                             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11Q23.2) MUTATED       18     15     24
  DEL PEAK 27(11Q23.2) WILD-TYPE     76     53     49
D59V5, multiclass
        clus
vv       DEL PEAK 27(11Q23.2) MUTATED DEL PEAK 27(11Q23.2) WILD-TYPE
  CLUS_1                           18                             76
  CLUS_2                           15                             53
  CLUS_3                           24                             49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11Q23.2) MUTATED       23     17     17
  DEL PEAK 27(11Q23.2) WILD-TYPE     89     54     35
D59V6, multiclass
        clus
vv       DEL PEAK 27(11Q23.2) MUTATED DEL PEAK 27(11Q23.2) WILD-TYPE
  CLUS_1                           23                             89
  CLUS_2                           17                             54
  CLUS_3                           17                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 27(11Q23.2) MUTATED       26     13     25     38     10
  DEL PEAK 27(11Q23.2) WILD-TYPE    112     99     51     68     44
D59V7, multiclass
        clus
vv       DEL PEAK 27(11Q23.2) MUTATED DEL PEAK 27(11Q23.2) WILD-TYPE
  CLUS_1                           26                            112
  CLUS_2                           13                             99
  CLUS_3                           25                             51
  CLUS_4                           38                             68
  CLUS_5                           10                             44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 27(11Q23.2) MUTATED       21      4     10     19     14     19
  DEL PEAK 27(11Q23.2) WILD-TYPE     62     53     34     65     32     32
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 27(11Q23.2) MUTATED       16      3      6
  DEL PEAK 27(11Q23.2) WILD-TYPE     33     15     48
D59V8, multiclass
        clus
vv       DEL PEAK 27(11Q23.2) MUTATED DEL PEAK 27(11Q23.2) WILD-TYPE
  CLUS_1                           21                             62
  CLUS_2                            4                             53
  CLUS_3                           10                             34
  CLUS_4                           19                             65
  CLUS_5                           14                             32
  CLUS_6                           19                             32
  CLUS_7                           16                             33
  CLUS_8                            3                             15
  CLUS_9                            6                             48
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11Q23.2) MUTATED       35     70     10
  DEL PEAK 27(11Q23.2) WILD-TYPE    144    161     68
D59V9, multiclass
        clus
vv       DEL PEAK 27(11Q23.2) MUTATED DEL PEAK 27(11Q23.2) WILD-TYPE
  CLUS_1                           35                            144
  CLUS_2                           70                            161
  CLUS_3                           10                             68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 27(11Q23.2) MUTATED       13     16     36     26     19      5
  DEL PEAK 27(11Q23.2) WILD-TYPE     58     28     82    111     64     30
D59V10, multiclass
        clus
vv       DEL PEAK 27(11Q23.2) MUTATED DEL PEAK 27(11Q23.2) WILD-TYPE
  CLUS_1                           13                             58
  CLUS_2                           16                             28
  CLUS_3                           36                             82
  CLUS_4                           26                            111
  CLUS_5                           19                             64
  CLUS_6                            5                             30
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11Q23.2) MUTATED       28     56     14
  DEL PEAK 27(11Q23.2) WILD-TYPE    127    136     64
D59V11, multiclass
        clus
vv       DEL PEAK 27(11Q23.2) MUTATED DEL PEAK 27(11Q23.2) WILD-TYPE
  CLUS_1                           28                            127
  CLUS_2                           56                            136
  CLUS_3                           14                             64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11Q23.2) MUTATED       39     56      3
  DEL PEAK 27(11Q23.2) WILD-TYPE    147    153     27
D59V12, multiclass
        clus
vv       DEL PEAK 27(11Q23.2) MUTATED DEL PEAK 27(11Q23.2) WILD-TYPE
  CLUS_1                           39                            147
  CLUS_2                           56                            153
  CLUS_3                            3                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(60) Variable = DEL PEAK 28(11Q25) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11Q25) MUTATED        2      2      0      1
  DEL PEAK 28(11Q25) WILD-TYPE      3      7     12      5
D60V1, multiclass
        clus
vv       DEL PEAK 28(11Q25) MUTATED DEL PEAK 28(11Q25) WILD-TYPE
  CLUS_1                          2                            3
  CLUS_2                          2                            7
  CLUS_3                          0                           12
  CLUS_4                          1                            5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11Q25) MUTATED        1      2      2
  DEL PEAK 28(11Q25) WILD-TYPE     13      9      5
D60V2, multiclass
        clus
vv       DEL PEAK 28(11Q25) MUTATED DEL PEAK 28(11Q25) WILD-TYPE
  CLUS_1                          1                           13
  CLUS_2                          2                            9
  CLUS_3                          2                            5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11Q25) MUTATED       44     34     34
  DEL PEAK 28(11Q25) WILD-TYPE    142    182     57
D60V3, multiclass
        clus
vv       DEL PEAK 28(11Q25) MUTATED DEL PEAK 28(11Q25) WILD-TYPE
  CLUS_1                         44                          142
  CLUS_2                         34                          182
  CLUS_3                         34                           57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11Q25) MUTATED       12     42     30     16
  DEL PEAK 28(11Q25) WILD-TYPE     80     83     85     83
D60V4, multiclass
        clus
vv       DEL PEAK 28(11Q25) MUTATED DEL PEAK 28(11Q25) WILD-TYPE
  CLUS_1                         12                           80
  CLUS_2                         42                           83
  CLUS_3                         30                           85
  CLUS_4                         16                           83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11Q25) MUTATED       15     15     26
  DEL PEAK 28(11Q25) WILD-TYPE     79     53     47
D60V5, multiclass
        clus
vv       DEL PEAK 28(11Q25) MUTATED DEL PEAK 28(11Q25) WILD-TYPE
  CLUS_1                         15                           79
  CLUS_2                         15                           53
  CLUS_3                         26                           47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11Q25) MUTATED       22     16     18
  DEL PEAK 28(11Q25) WILD-TYPE     90     55     34
D60V6, multiclass
        clus
vv       DEL PEAK 28(11Q25) MUTATED DEL PEAK 28(11Q25) WILD-TYPE
  CLUS_1                         22                           90
  CLUS_2                         16                           55
  CLUS_3                         18                           34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 28(11Q25) MUTATED       24     14     26     34     10
  DEL PEAK 28(11Q25) WILD-TYPE    114     98     50     72     44
D60V7, multiclass
        clus
vv       DEL PEAK 28(11Q25) MUTATED DEL PEAK 28(11Q25) WILD-TYPE
  CLUS_1                         24                          114
  CLUS_2                         14                           98
  CLUS_3                         26                           50
  CLUS_4                         34                           72
  CLUS_5                         10                           44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 28(11Q25) MUTATED       19      5     11     17     14     17     16
  DEL PEAK 28(11Q25) WILD-TYPE     64     52     33     67     32     34     33
                              vv
clus                           CLUS_8 CLUS_9
  DEL PEAK 28(11Q25) MUTATED        3      6
  DEL PEAK 28(11Q25) WILD-TYPE     15     48
D60V8, multiclass
        clus
vv       DEL PEAK 28(11Q25) MUTATED DEL PEAK 28(11Q25) WILD-TYPE
  CLUS_1                         19                           64
  CLUS_2                          5                           52
  CLUS_3                         11                           33
  CLUS_4                         17                           67
  CLUS_5                         14                           32
  CLUS_6                         17                           34
  CLUS_7                         16                           33
  CLUS_8                          3                           15
  CLUS_9                          6                           48
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11Q25) MUTATED       37     61     13
  DEL PEAK 28(11Q25) WILD-TYPE    142    170     65
D60V9, multiclass
        clus
vv       DEL PEAK 28(11Q25) MUTATED DEL PEAK 28(11Q25) WILD-TYPE
  CLUS_1                         37                          142
  CLUS_2                         61                          170
  CLUS_3                         13                           65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 28(11Q25) MUTATED       13     13     32     29     19      5
  DEL PEAK 28(11Q25) WILD-TYPE     58     31     86    108     64     30
D60V10, multiclass
        clus
vv       DEL PEAK 28(11Q25) MUTATED DEL PEAK 28(11Q25) WILD-TYPE
  CLUS_1                         13                           58
  CLUS_2                         13                           31
  CLUS_3                         32                           86
  CLUS_4                         29                          108
  CLUS_5                         19                           64
  CLUS_6                          5                           30
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11Q25) MUTATED       33     51     14
  DEL PEAK 28(11Q25) WILD-TYPE    122    141     64
D60V11, multiclass
        clus
vv       DEL PEAK 28(11Q25) MUTATED DEL PEAK 28(11Q25) WILD-TYPE
  CLUS_1                         33                          122
  CLUS_2                         51                          141
  CLUS_3                         14                           64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11Q25) MUTATED       42     53      3
  DEL PEAK 28(11Q25) WILD-TYPE    144    156     27
D60V12, multiclass
        clus
vv       DEL PEAK 28(11Q25) MUTATED DEL PEAK 28(11Q25) WILD-TYPE
  CLUS_1                         42                          144
  CLUS_2                         53                          156
  CLUS_3                          3                           27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(61) Variable = DEL PEAK 29(12P13.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(12P13.2) MUTATED        0      5      5      2
  DEL PEAK 29(12P13.2) WILD-TYPE      5      4      7      4
D61V1, multiclass
        clus
vv       DEL PEAK 29(12P13.2) MUTATED DEL PEAK 29(12P13.2) WILD-TYPE
  CLUS_1                            0                              5
  CLUS_2                            5                              4
  CLUS_3                            5                              7
  CLUS_4                            2                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(12P13.2) MUTATED        6      4      2
  DEL PEAK 29(12P13.2) WILD-TYPE      8      7      5
D61V2, multiclass
        clus
vv       DEL PEAK 29(12P13.2) MUTATED DEL PEAK 29(12P13.2) WILD-TYPE
  CLUS_1                            6                              8
  CLUS_2                            4                              7
  CLUS_3                            2                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(12P13.2) MUTATED       68     45     21
  DEL PEAK 29(12P13.2) WILD-TYPE    118    171     70
D61V3, multiclass
        clus
vv       DEL PEAK 29(12P13.2) MUTATED DEL PEAK 29(12P13.2) WILD-TYPE
  CLUS_1                           68                            118
  CLUS_2                           45                            171
  CLUS_3                           21                             70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(12P13.2) MUTATED       24     33     43     16
  DEL PEAK 29(12P13.2) WILD-TYPE     68     92     72     83
D61V4, multiclass
        clus
vv       DEL PEAK 29(12P13.2) MUTATED DEL PEAK 29(12P13.2) WILD-TYPE
  CLUS_1                           24                             68
  CLUS_2                           33                             92
  CLUS_3                           43                             72
  CLUS_4                           16                             83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(12P13.2) MUTATED       37     17     15
  DEL PEAK 29(12P13.2) WILD-TYPE     57     51     58
D61V5, multiclass
        clus
vv       DEL PEAK 29(12P13.2) MUTATED DEL PEAK 29(12P13.2) WILD-TYPE
  CLUS_1                           37                             57
  CLUS_2                           17                             51
  CLUS_3                           15                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(12P13.2) MUTATED       41     18     10
  DEL PEAK 29(12P13.2) WILD-TYPE     71     53     42
D61V6, multiclass
        clus
vv       DEL PEAK 29(12P13.2) MUTATED DEL PEAK 29(12P13.2) WILD-TYPE
  CLUS_1                           41                             71
  CLUS_2                           18                             53
  CLUS_3                           10                             42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 29(12P13.2) MUTATED       44     38      9     26     16
  DEL PEAK 29(12P13.2) WILD-TYPE     94     74     67     80     38
D61V7, multiclass
        clus
vv       DEL PEAK 29(12P13.2) MUTATED DEL PEAK 29(12P13.2) WILD-TYPE
  CLUS_1                           44                             94
  CLUS_2                           38                             74
  CLUS_3                            9                             67
  CLUS_4                           26                             80
  CLUS_5                           16                             38
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 29(12P13.2) MUTATED       27     20     12     30     11      9
  DEL PEAK 29(12P13.2) WILD-TYPE     56     37     32     54     35     42
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 29(12P13.2) MUTATED        5      2     17
  DEL PEAK 29(12P13.2) WILD-TYPE     44     16     37
D61V8, multiclass
        clus
vv       DEL PEAK 29(12P13.2) MUTATED DEL PEAK 29(12P13.2) WILD-TYPE
  CLUS_1                           27                             56
  CLUS_2                           20                             37
  CLUS_3                           12                             32
  CLUS_4                           30                             54
  CLUS_5                           11                             35
  CLUS_6                            9                             42
  CLUS_7                            5                             44
  CLUS_8                            2                             16
  CLUS_9                           17                             37
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(12P13.2) MUTATED       45     64     22
  DEL PEAK 29(12P13.2) WILD-TYPE    134    167     56
D61V9, multiclass
        clus
vv       DEL PEAK 29(12P13.2) MUTATED DEL PEAK 29(12P13.2) WILD-TYPE
  CLUS_1                           45                            134
  CLUS_2                           64                            167
  CLUS_3                           22                             56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 29(12P13.2) MUTATED       20     10     32     38     23      8
  DEL PEAK 29(12P13.2) WILD-TYPE     51     34     86     99     60     27
D61V10, multiclass
        clus
vv       DEL PEAK 29(12P13.2) MUTATED DEL PEAK 29(12P13.2) WILD-TYPE
  CLUS_1                           20                             51
  CLUS_2                           10                             34
  CLUS_3                           32                             86
  CLUS_4                           38                             99
  CLUS_5                           23                             60
  CLUS_6                            8                             27
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(12P13.2) MUTATED       43     53     16
  DEL PEAK 29(12P13.2) WILD-TYPE    112    139     62
D61V11, multiclass
        clus
vv       DEL PEAK 29(12P13.2) MUTATED DEL PEAK 29(12P13.2) WILD-TYPE
  CLUS_1                           43                            112
  CLUS_2                           53                            139
  CLUS_3                           16                             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(12P13.2) MUTATED       47     57      8
  DEL PEAK 29(12P13.2) WILD-TYPE    139    152     22
D61V12, multiclass
        clus
vv       DEL PEAK 29(12P13.2) MUTATED DEL PEAK 29(12P13.2) WILD-TYPE
  CLUS_1                           47                            139
  CLUS_2                           57                            152
  CLUS_3                            8                             22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(62) Variable = DEL PEAK 30(12Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q12) MUTATED        0      2      4      1
  DEL PEAK 30(12Q12) WILD-TYPE      5      7      8      5
D62V1, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                          0                            5
  CLUS_2                          2                            7
  CLUS_3                          4                            8
  CLUS_4                          1                            5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q12) MUTATED        4      2      1
  DEL PEAK 30(12Q12) WILD-TYPE     10      9      6
D62V2, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                          4                           10
  CLUS_2                          2                            9
  CLUS_3                          1                            6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q12) MUTATED       53     31     10
  DEL PEAK 30(12Q12) WILD-TYPE    133    185     81
D62V3, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         53                          133
  CLUS_2                         31                          185
  CLUS_3                         10                           81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q12) MUTATED       19     19     30     16
  DEL PEAK 30(12Q12) WILD-TYPE     73    106     85     83
D62V4, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         19                           73
  CLUS_2                         19                          106
  CLUS_3                         30                           85
  CLUS_4                         16                           83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q12) MUTATED       26     13      8
  DEL PEAK 30(12Q12) WILD-TYPE     68     55     65
D62V5, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         26                           68
  CLUS_2                         13                           55
  CLUS_3                          8                           65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q12) MUTATED       29     14      4
  DEL PEAK 30(12Q12) WILD-TYPE     83     57     48
D62V6, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         29                           83
  CLUS_2                         14                           57
  CLUS_3                          4                           48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 30(12Q12) MUTATED       35     27     10     10     11
  DEL PEAK 30(12Q12) WILD-TYPE    103     85     66     96     43
D62V7, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         35                          103
  CLUS_2                         27                           85
  CLUS_3                         10                           66
  CLUS_4                         10                           96
  CLUS_5                         11                           43
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 30(12Q12) MUTATED       23     11      7     18      9      2      8
  DEL PEAK 30(12Q12) WILD-TYPE     60     46     37     66     37     49     41
                              vv
clus                           CLUS_8 CLUS_9
  DEL PEAK 30(12Q12) MUTATED        1     14
  DEL PEAK 30(12Q12) WILD-TYPE     17     40
D62V8, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         23                           60
  CLUS_2                         11                           46
  CLUS_3                          7                           37
  CLUS_4                         18                           66
  CLUS_5                          9                           37
  CLUS_6                          2                           49
  CLUS_7                          8                           41
  CLUS_8                          1                           17
  CLUS_9                         14                           40
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q12) MUTATED       39     34     19
  DEL PEAK 30(12Q12) WILD-TYPE    140    197     59
D62V9, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         39                          140
  CLUS_2                         34                          197
  CLUS_3                         19                           59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 30(12Q12) MUTATED       17      1     23     32     11      8
  DEL PEAK 30(12Q12) WILD-TYPE     54     43     95    105     72     27
D62V10, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         17                           54
  CLUS_2                          1                           43
  CLUS_3                         23                           95
  CLUS_4                         32                          105
  CLUS_5                         11                           72
  CLUS_6                          8                           27
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q12) MUTATED       34     34     15
  DEL PEAK 30(12Q12) WILD-TYPE    121    158     63
D62V11, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         34                          121
  CLUS_2                         34                          158
  CLUS_3                         15                           63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q12) MUTATED       39     36      8
  DEL PEAK 30(12Q12) WILD-TYPE    147    173     22
D62V12, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         39                          147
  CLUS_2                         36                          173
  CLUS_3                          8                           22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(63) Variable = DEL PEAK 31(12Q24.33) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(12Q24.33) MUTATED        0      0      5      1
  DEL PEAK 31(12Q24.33) WILD-TYPE      5      9      7      5
D63V1, multiclass
        clus
vv       DEL PEAK 31(12Q24.33) MUTATED DEL PEAK 31(12Q24.33) WILD-TYPE
  CLUS_1                             0                               5
  CLUS_2                             0                               9
  CLUS_3                             5                               7
  CLUS_4                             1                               5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(12Q24.33) MUTATED        5      0      1
  DEL PEAK 31(12Q24.33) WILD-TYPE      9     11      6
D63V2, multiclass
        clus
vv       DEL PEAK 31(12Q24.33) MUTATED DEL PEAK 31(12Q24.33) WILD-TYPE
  CLUS_1                             5                               9
  CLUS_2                             0                              11
  CLUS_3                             1                               6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(12Q24.33) MUTATED       64     50      9
  DEL PEAK 31(12Q24.33) WILD-TYPE    122    166     82
D63V3, multiclass
        clus
vv       DEL PEAK 31(12Q24.33) MUTATED DEL PEAK 31(12Q24.33) WILD-TYPE
  CLUS_1                            64                             122
  CLUS_2                            50                             166
  CLUS_3                             9                              82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(12Q24.33) MUTATED       30     28     35     17
  DEL PEAK 31(12Q24.33) WILD-TYPE     62     97     80     82
D63V4, multiclass
        clus
vv       DEL PEAK 31(12Q24.33) MUTATED DEL PEAK 31(12Q24.33) WILD-TYPE
  CLUS_1                            30                              62
  CLUS_2                            28                              97
  CLUS_3                            35                              80
  CLUS_4                            17                              82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(12Q24.33) MUTATED       27     21     10
  DEL PEAK 31(12Q24.33) WILD-TYPE     67     47     63
D63V5, multiclass
        clus
vv       DEL PEAK 31(12Q24.33) MUTATED DEL PEAK 31(12Q24.33) WILD-TYPE
  CLUS_1                            27                              67
  CLUS_2                            21                              47
  CLUS_3                            10                              63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(12Q24.33) MUTATED       32     22      4
  DEL PEAK 31(12Q24.33) WILD-TYPE     80     49     48
D63V6, multiclass
        clus
vv       DEL PEAK 31(12Q24.33) MUTATED DEL PEAK 31(12Q24.33) WILD-TYPE
  CLUS_1                            32                              80
  CLUS_2                            22                              49
  CLUS_3                             4                              48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 31(12Q24.33) MUTATED       46     35      7     16     18
  DEL PEAK 31(12Q24.33) WILD-TYPE     92     77     69     90     36
D63V7, multiclass
        clus
vv       DEL PEAK 31(12Q24.33) MUTATED DEL PEAK 31(12Q24.33) WILD-TYPE
  CLUS_1                            46                              92
  CLUS_2                            35                              77
  CLUS_3                             7                              69
  CLUS_4                            16                              90
  CLUS_5                            18                              36
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 31(12Q24.33) MUTATED       31     18      4     24     15      2
  DEL PEAK 31(12Q24.33) WILD-TYPE     52     39     40     60     31     49
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 31(12Q24.33) MUTATED        6      2     20
  DEL PEAK 31(12Q24.33) WILD-TYPE     43     16     34
D63V8, multiclass
        clus
vv       DEL PEAK 31(12Q24.33) MUTATED DEL PEAK 31(12Q24.33) WILD-TYPE
  CLUS_1                            31                              52
  CLUS_2                            18                              39
  CLUS_3                             4                              40
  CLUS_4                            24                              60
  CLUS_5                            15                              31
  CLUS_6                             2                              49
  CLUS_7                             6                              43
  CLUS_8                             2                              16
  CLUS_9                            20                              34
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(12Q24.33) MUTATED       50     50     21
  DEL PEAK 31(12Q24.33) WILD-TYPE    129    181     57
D63V9, multiclass
        clus
vv       DEL PEAK 31(12Q24.33) MUTATED DEL PEAK 31(12Q24.33) WILD-TYPE
  CLUS_1                            50                             129
  CLUS_2                            50                             181
  CLUS_3                            21                              57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 31(12Q24.33) MUTATED       20      6     28     45     13      9
  DEL PEAK 31(12Q24.33) WILD-TYPE     51     38     90     92     70     26
D63V10, multiclass
        clus
vv       DEL PEAK 31(12Q24.33) MUTATED DEL PEAK 31(12Q24.33) WILD-TYPE
  CLUS_1                            20                              51
  CLUS_2                             6                              38
  CLUS_3                            28                              90
  CLUS_4                            45                              92
  CLUS_5                            13                              70
  CLUS_6                             9                              26
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(12Q24.33) MUTATED       48     43     19
  DEL PEAK 31(12Q24.33) WILD-TYPE    107    149     59
D63V11, multiclass
        clus
vv       DEL PEAK 31(12Q24.33) MUTATED DEL PEAK 31(12Q24.33) WILD-TYPE
  CLUS_1                            48                             107
  CLUS_2                            43                             149
  CLUS_3                            19                              59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(12Q24.33) MUTATED       55     47      8
  DEL PEAK 31(12Q24.33) WILD-TYPE    131    162     22
D63V12, multiclass
        clus
vv       DEL PEAK 31(12Q24.33) MUTATED DEL PEAK 31(12Q24.33) WILD-TYPE
  CLUS_1                            55                             131
  CLUS_2                            47                             162
  CLUS_3                             8                              22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(64) Variable = DEL PEAK 32(13Q12.11) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q12.11) MUTATED        5      5      1      4
  DEL PEAK 32(13Q12.11) WILD-TYPE      0      4     11      2
D64V1, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                             5                               0
  CLUS_2                             5                               4
  CLUS_3                             1                              11
  CLUS_4                             4                               2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q12.11) MUTATED        3      7      5
  DEL PEAK 32(13Q12.11) WILD-TYPE     11      4      2
D64V2, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                             3                              11
  CLUS_2                             7                               4
  CLUS_3                             5                               2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q12.11) MUTATED      142     72     68
  DEL PEAK 32(13Q12.11) WILD-TYPE     44    144     23
D64V3, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                           142                              44
  CLUS_2                            72                             144
  CLUS_3                            68                              23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q12.11) MUTATED       38     82     73     56
  DEL PEAK 32(13Q12.11) WILD-TYPE     54     43     42     43
D64V4, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                            38                              54
  CLUS_2                            82                              43
  CLUS_3                            73                              42
  CLUS_4                            56                              43
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q12.11) MUTATED       64     26     43
  DEL PEAK 32(13Q12.11) WILD-TYPE     30     42     30
D64V5, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                            64                              30
  CLUS_2                            26                              42
  CLUS_3                            43                              30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q12.11) MUTATED       81     22     30
  DEL PEAK 32(13Q12.11) WILD-TYPE     31     49     22
D64V6, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                            81                              31
  CLUS_2                            22                              49
  CLUS_3                            30                              22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 32(13Q12.11) MUTATED      100     45     30     76     27
  DEL PEAK 32(13Q12.11) WILD-TYPE     38     67     46     30     27
D64V7, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                           100                              38
  CLUS_2                            45                              67
  CLUS_3                            30                              46
  CLUS_4                            76                              30
  CLUS_5                            27                              27
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 32(13Q12.11) MUTATED       60     24     28     61     14     37
  DEL PEAK 32(13Q12.11) WILD-TYPE     23     33     16     23     32     14
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 32(13Q12.11) MUTATED       24      1     29
  DEL PEAK 32(13Q12.11) WILD-TYPE     25     17     25
D64V8, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                            60                              23
  CLUS_2                            24                              33
  CLUS_3                            28                              16
  CLUS_4                            61                              23
  CLUS_5                            14                              32
  CLUS_6                            37                              14
  CLUS_7                            24                              25
  CLUS_8                             1                              17
  CLUS_9                            29                              25
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q12.11) MUTATED       85    149     47
  DEL PEAK 32(13Q12.11) WILD-TYPE     94     82     31
D64V9, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                            85                              94
  CLUS_2                           149                              82
  CLUS_3                            47                              31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 32(13Q12.11) MUTATED       37     30     75     64     58     17
  DEL PEAK 32(13Q12.11) WILD-TYPE     34     14     43     73     25     18
D64V10, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                            37                              34
  CLUS_2                            30                              14
  CLUS_3                            75                              43
  CLUS_4                            64                              73
  CLUS_5                            58                              25
  CLUS_6                            17                              18
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q12.11) MUTATED       74    126     47
  DEL PEAK 32(13Q12.11) WILD-TYPE     81     66     31
D64V11, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                            74                              81
  CLUS_2                           126                              66
  CLUS_3                            47                              31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q12.11) MUTATED       89    141     17
  DEL PEAK 32(13Q12.11) WILD-TYPE     97     68     13
D64V12, multiclass
        clus
vv       DEL PEAK 32(13Q12.11) MUTATED DEL PEAK 32(13Q12.11) WILD-TYPE
  CLUS_1                            89                              97
  CLUS_2                           141                              68
  CLUS_3                            17                              13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(65) Variable = DEL PEAK 33(13Q12.13) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(13Q12.13) MUTATED        4      5      1      4
  DEL PEAK 33(13Q12.13) WILD-TYPE      1      4     11      2
D65V1, multiclass
        clus
vv       DEL PEAK 33(13Q12.13) MUTATED DEL PEAK 33(13Q12.13) WILD-TYPE
  CLUS_1                             4                               1
  CLUS_2                             5                               4
  CLUS_3                             1                              11
  CLUS_4                             4                               2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q12.13) MUTATED        3      6      5
  DEL PEAK 33(13Q12.13) WILD-TYPE     11      5      2
D65V2, multiclass
        clus
vv       DEL PEAK 33(13Q12.13) MUTATED DEL PEAK 33(13Q12.13) WILD-TYPE
  CLUS_1                             3                              11
  CLUS_2                             6                               5
  CLUS_3                             5                               2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q12.13) MUTATED      144     70     68
  DEL PEAK 33(13Q12.13) WILD-TYPE     42    146     23
D65V3, multiclass
        clus
vv       DEL PEAK 33(13Q12.13) MUTATED DEL PEAK 33(13Q12.13) WILD-TYPE
  CLUS_1                           144                              42
  CLUS_2                            70                             146
  CLUS_3                            68                              23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(13Q12.13) MUTATED       38     81     76     54
  DEL PEAK 33(13Q12.13) WILD-TYPE     54     44     39     45
D65V4, multiclass
        clus
vv       DEL PEAK 33(13Q12.13) MUTATED DEL PEAK 33(13Q12.13) WILD-TYPE
  CLUS_1                            38                              54
  CLUS_2                            81                              44
  CLUS_3                            76                              39
  CLUS_4                            54                              45
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q12.13) MUTATED       64     26     43
  DEL PEAK 33(13Q12.13) WILD-TYPE     30     42     30
D65V5, multiclass
        clus
vv       DEL PEAK 33(13Q12.13) MUTATED DEL PEAK 33(13Q12.13) WILD-TYPE
  CLUS_1                            64                              30
  CLUS_2                            26                              42
  CLUS_3                            43                              30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q12.13) MUTATED       80     22     31
  DEL PEAK 33(13Q12.13) WILD-TYPE     32     49     21
D65V6, multiclass
        clus
vv       DEL PEAK 33(13Q12.13) MUTATED DEL PEAK 33(13Q12.13) WILD-TYPE
  CLUS_1                            80                              32
  CLUS_2                            22                              49
  CLUS_3                            31                              21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 33(13Q12.13) MUTATED       99     47     29     76     27
  DEL PEAK 33(13Q12.13) WILD-TYPE     39     65     47     30     27
D65V7, multiclass
        clus
vv       DEL PEAK 33(13Q12.13) MUTATED DEL PEAK 33(13Q12.13) WILD-TYPE
  CLUS_1                            99                              39
  CLUS_2                            47                              65
  CLUS_3                            29                              47
  CLUS_4                            76                              30
  CLUS_5                            27                              27
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 33(13Q12.13) MUTATED       60     26     28     58     14     39
  DEL PEAK 33(13Q12.13) WILD-TYPE     23     31     16     26     32     12
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 33(13Q12.13) MUTATED       23      1     29
  DEL PEAK 33(13Q12.13) WILD-TYPE     26     17     25
D65V8, multiclass
        clus
vv       DEL PEAK 33(13Q12.13) MUTATED DEL PEAK 33(13Q12.13) WILD-TYPE
  CLUS_1                            60                              23
  CLUS_2                            26                              31
  CLUS_3                            28                              16
  CLUS_4                            58                              26
  CLUS_5                            14                              32
  CLUS_6                            39                              12
  CLUS_7                            23                              26
  CLUS_8                             1                              17
  CLUS_9                            29                              25
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q12.13) MUTATED       86    148     47
  DEL PEAK 33(13Q12.13) WILD-TYPE     93     83     31
D65V9, multiclass
        clus
vv       DEL PEAK 33(13Q12.13) MUTATED DEL PEAK 33(13Q12.13) WILD-TYPE
  CLUS_1                            86                              93
  CLUS_2                           148                              83
  CLUS_3                            47                              31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 33(13Q12.13) MUTATED       37     32     73     66     57     16
  DEL PEAK 33(13Q12.13) WILD-TYPE     34     12     45     71     26     19
D65V10, multiclass
        clus
vv       DEL PEAK 33(13Q12.13) MUTATED DEL PEAK 33(13Q12.13) WILD-TYPE
  CLUS_1                            37                              34
  CLUS_2                            32                              12
  CLUS_3                            73                              45
  CLUS_4                            66                              71
  CLUS_5                            57                              26
  CLUS_6                            16                              19
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q12.13) MUTATED       75    126     47
  DEL PEAK 33(13Q12.13) WILD-TYPE     80     66     31
D65V11, multiclass
        clus
vv       DEL PEAK 33(13Q12.13) MUTATED DEL PEAK 33(13Q12.13) WILD-TYPE
  CLUS_1                            75                              80
  CLUS_2                           126                              66
  CLUS_3                            47                              31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q12.13) MUTATED       90    141     17
  DEL PEAK 33(13Q12.13) WILD-TYPE     96     68     13
D65V12, multiclass
        clus
vv       DEL PEAK 33(13Q12.13) MUTATED DEL PEAK 33(13Q12.13) WILD-TYPE
  CLUS_1                            90                              96
  CLUS_2                           141                              68
  CLUS_3                            17                              13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(66) Variable = DEL PEAK 34(13Q14.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(13Q14.2) MUTATED        4      5      1      4
  DEL PEAK 34(13Q14.2) WILD-TYPE      1      4     11      2
D66V1, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                            4                              1
  CLUS_2                            5                              4
  CLUS_3                            1                             11
  CLUS_4                            4                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(13Q14.2) MUTATED        3      6      5
  DEL PEAK 34(13Q14.2) WILD-TYPE     11      5      2
D66V2, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                            3                             11
  CLUS_2                            6                              5
  CLUS_3                            5                              2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(13Q14.2) MUTATED      139     66     66
  DEL PEAK 34(13Q14.2) WILD-TYPE     47    150     25
D66V3, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                          139                             47
  CLUS_2                           66                            150
  CLUS_3                           66                             25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(13Q14.2) MUTATED       35     78     67     55
  DEL PEAK 34(13Q14.2) WILD-TYPE     57     47     48     44
D66V4, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                           35                             57
  CLUS_2                           78                             47
  CLUS_3                           67                             48
  CLUS_4                           55                             44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(13Q14.2) MUTATED       61     23     41
  DEL PEAK 34(13Q14.2) WILD-TYPE     33     45     32
D66V5, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                           61                             33
  CLUS_2                           23                             45
  CLUS_3                           41                             32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(13Q14.2) MUTATED       74     19     32
  DEL PEAK 34(13Q14.2) WILD-TYPE     38     52     20
D66V6, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                           74                             38
  CLUS_2                           19                             52
  CLUS_3                           32                             20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 34(13Q14.2) MUTATED       98     43     28     74     25
  DEL PEAK 34(13Q14.2) WILD-TYPE     40     69     48     32     29
D66V7, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                           98                             40
  CLUS_2                           43                             69
  CLUS_3                           28                             48
  CLUS_4                           74                             32
  CLUS_5                           25                             29
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 34(13Q14.2) MUTATED       59     24     29     54     11     40
  DEL PEAK 34(13Q14.2) WILD-TYPE     24     33     15     30     35     11
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 34(13Q14.2) MUTATED       23      1     27
  DEL PEAK 34(13Q14.2) WILD-TYPE     26     17     27
D66V8, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                           59                             24
  CLUS_2                           24                             33
  CLUS_3                           29                             15
  CLUS_4                           54                             30
  CLUS_5                           11                             35
  CLUS_6                           40                             11
  CLUS_7                           23                             26
  CLUS_8                            1                             17
  CLUS_9                           27                             27
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(13Q14.2) MUTATED       80    143     45
  DEL PEAK 34(13Q14.2) WILD-TYPE     99     88     33
D66V9, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                           80                             99
  CLUS_2                          143                             88
  CLUS_3                           45                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 34(13Q14.2) MUTATED       33     33     74     62     51     15
  DEL PEAK 34(13Q14.2) WILD-TYPE     38     11     44     75     32     20
D66V10, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                           33                             38
  CLUS_2                           33                             11
  CLUS_3                           74                             44
  CLUS_4                           62                             75
  CLUS_5                           51                             32
  CLUS_6                           15                             20
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(13Q14.2) MUTATED       68    123     43
  DEL PEAK 34(13Q14.2) WILD-TYPE     87     69     35
D66V11, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                           68                             87
  CLUS_2                          123                             69
  CLUS_3                           43                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(13Q14.2) MUTATED       82    136     16
  DEL PEAK 34(13Q14.2) WILD-TYPE    104     73     14
D66V12, multiclass
        clus
vv       DEL PEAK 34(13Q14.2) MUTATED DEL PEAK 34(13Q14.2) WILD-TYPE
  CLUS_1                           82                            104
  CLUS_2                          136                             73
  CLUS_3                           16                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(67) Variable = DEL PEAK 35(13Q34) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(13Q34) MUTATED        3      4      1      4
  DEL PEAK 35(13Q34) WILD-TYPE      2      5     11      2
D67V1, multiclass
        clus
vv       DEL PEAK 35(13Q34) MUTATED DEL PEAK 35(13Q34) WILD-TYPE
  CLUS_1                          3                            2
  CLUS_2                          4                            5
  CLUS_3                          1                           11
  CLUS_4                          4                            2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(13Q34) MUTATED        3      4      5
  DEL PEAK 35(13Q34) WILD-TYPE     11      7      2
D67V2, multiclass
        clus
vv       DEL PEAK 35(13Q34) MUTATED DEL PEAK 35(13Q34) WILD-TYPE
  CLUS_1                          3                           11
  CLUS_2                          4                            7
  CLUS_3                          5                            2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(13Q34) MUTATED      114     59     59
  DEL PEAK 35(13Q34) WILD-TYPE     72    157     32
D67V3, multiclass
        clus
vv       DEL PEAK 35(13Q34) MUTATED DEL PEAK 35(13Q34) WILD-TYPE
  CLUS_1                        114                           72
  CLUS_2                         59                          157
  CLUS_3                         59                           32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(13Q34) MUTATED       31     63     61     47
  DEL PEAK 35(13Q34) WILD-TYPE     61     62     54     52
D67V4, multiclass
        clus
vv       DEL PEAK 35(13Q34) MUTATED DEL PEAK 35(13Q34) WILD-TYPE
  CLUS_1                         31                           61
  CLUS_2                         63                           62
  CLUS_3                         61                           54
  CLUS_4                         47                           52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(13Q34) MUTATED       50     17     37
  DEL PEAK 35(13Q34) WILD-TYPE     44     51     36
D67V5, multiclass
        clus
vv       DEL PEAK 35(13Q34) MUTATED DEL PEAK 35(13Q34) WILD-TYPE
  CLUS_1                         50                           44
  CLUS_2                         17                           51
  CLUS_3                         37                           36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(13Q34) MUTATED       60     15     29
  DEL PEAK 35(13Q34) WILD-TYPE     52     56     23
D67V6, multiclass
        clus
vv       DEL PEAK 35(13Q34) MUTATED DEL PEAK 35(13Q34) WILD-TYPE
  CLUS_1                         60                           52
  CLUS_2                         15                           56
  CLUS_3                         29                           23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 35(13Q34) MUTATED       80     38     25     65     22
  DEL PEAK 35(13Q34) WILD-TYPE     58     74     51     41     32
D67V7, multiclass
        clus
vv       DEL PEAK 35(13Q34) MUTATED DEL PEAK 35(13Q34) WILD-TYPE
  CLUS_1                         80                           58
  CLUS_2                         38                           74
  CLUS_3                         25                           51
  CLUS_4                         65                           41
  CLUS_5                         22                           32
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 35(13Q34) MUTATED       53     19     24     43     13     33     21
  DEL PEAK 35(13Q34) WILD-TYPE     30     38     20     41     33     18     28
                              vv
clus                           CLUS_8 CLUS_9
  DEL PEAK 35(13Q34) MUTATED        1     23
  DEL PEAK 35(13Q34) WILD-TYPE     17     31
D67V8, multiclass
        clus
vv       DEL PEAK 35(13Q34) MUTATED DEL PEAK 35(13Q34) WILD-TYPE
  CLUS_1                         53                           30
  CLUS_2                         19                           38
  CLUS_3                         24                           20
  CLUS_4                         43                           41
  CLUS_5                         13                           33
  CLUS_6                         33                           18
  CLUS_7                         21                           28
  CLUS_8                          1                           17
  CLUS_9                         23                           31
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(13Q34) MUTATED       70    116     43
  DEL PEAK 35(13Q34) WILD-TYPE    109    115     35
D67V9, multiclass
        clus
vv       DEL PEAK 35(13Q34) MUTATED DEL PEAK 35(13Q34) WILD-TYPE
  CLUS_1                         70                          109
  CLUS_2                        116                          115
  CLUS_3                         43                           35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 35(13Q34) MUTATED       31     29     61     53     41     14
  DEL PEAK 35(13Q34) WILD-TYPE     40     15     57     84     42     21
D67V10, multiclass
        clus
vv       DEL PEAK 35(13Q34) MUTATED DEL PEAK 35(13Q34) WILD-TYPE
  CLUS_1                         31                           40
  CLUS_2                         29                           15
  CLUS_3                         61                           57
  CLUS_4                         53                           84
  CLUS_5                         41                           42
  CLUS_6                         14                           21
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(13Q34) MUTATED       61     99     41
  DEL PEAK 35(13Q34) WILD-TYPE     94     93     37
D67V11, multiclass
        clus
vv       DEL PEAK 35(13Q34) MUTATED DEL PEAK 35(13Q34) WILD-TYPE
  CLUS_1                         61                           94
  CLUS_2                         99                           93
  CLUS_3                         41                           37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(13Q34) MUTATED       78    110     13
  DEL PEAK 35(13Q34) WILD-TYPE    108     99     17
D67V12, multiclass
        clus
vv       DEL PEAK 35(13Q34) MUTATED DEL PEAK 35(13Q34) WILD-TYPE
  CLUS_1                         78                          108
  CLUS_2                        110                           99
  CLUS_3                         13                           17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(68) Variable = DEL PEAK 36(14Q32.33) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(14Q32.33) MUTATED        1      3      3      3
  DEL PEAK 36(14Q32.33) WILD-TYPE      4      6      9      3
D68V1, multiclass
        clus
vv       DEL PEAK 36(14Q32.33) MUTATED DEL PEAK 36(14Q32.33) WILD-TYPE
  CLUS_1                             1                               4
  CLUS_2                             3                               6
  CLUS_3                             3                               9
  CLUS_4                             3                               3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(14Q32.33) MUTATED        3      3      4
  DEL PEAK 36(14Q32.33) WILD-TYPE     11      8      3
D68V2, multiclass
        clus
vv       DEL PEAK 36(14Q32.33) MUTATED DEL PEAK 36(14Q32.33) WILD-TYPE
  CLUS_1                             3                              11
  CLUS_2                             3                               8
  CLUS_3                             4                               3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(14Q32.33) MUTATED       65     52     27
  DEL PEAK 36(14Q32.33) WILD-TYPE    121    164     64
D68V3, multiclass
        clus
vv       DEL PEAK 36(14Q32.33) MUTATED DEL PEAK 36(14Q32.33) WILD-TYPE
  CLUS_1                            65                             121
  CLUS_2                            52                             164
  CLUS_3                            27                              64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(14Q32.33) MUTATED       22     41     35     26
  DEL PEAK 36(14Q32.33) WILD-TYPE     70     84     80     73
D68V4, multiclass
        clus
vv       DEL PEAK 36(14Q32.33) MUTATED DEL PEAK 36(14Q32.33) WILD-TYPE
  CLUS_1                            22                              70
  CLUS_2                            41                              84
  CLUS_3                            35                              80
  CLUS_4                            26                              73
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(14Q32.33) MUTATED       26     16     29
  DEL PEAK 36(14Q32.33) WILD-TYPE     68     52     44
D68V5, multiclass
        clus
vv       DEL PEAK 36(14Q32.33) MUTATED DEL PEAK 36(14Q32.33) WILD-TYPE
  CLUS_1                            26                              68
  CLUS_2                            16                              52
  CLUS_3                            29                              44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(14Q32.33) MUTATED       35     16     20
  DEL PEAK 36(14Q32.33) WILD-TYPE     77     55     32
D68V6, multiclass
        clus
vv       DEL PEAK 36(14Q32.33) MUTATED DEL PEAK 36(14Q32.33) WILD-TYPE
  CLUS_1                            35                              77
  CLUS_2                            16                              55
  CLUS_3                            20                              32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 36(14Q32.33) MUTATED       38     30     31     31     13
  DEL PEAK 36(14Q32.33) WILD-TYPE    100     82     45     75     41
D68V7, multiclass
        clus
vv       DEL PEAK 36(14Q32.33) MUTATED DEL PEAK 36(14Q32.33) WILD-TYPE
  CLUS_1                            38                             100
  CLUS_2                            30                              82
  CLUS_3                            31                              45
  CLUS_4                            31                              75
  CLUS_5                            13                              41
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 36(14Q32.33) MUTATED       25     13      9     27     12     16
  DEL PEAK 36(14Q32.33) WILD-TYPE     58     44     35     57     34     35
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 36(14Q32.33) MUTATED       24      3     14
  DEL PEAK 36(14Q32.33) WILD-TYPE     25     15     40
D68V8, multiclass
        clus
vv       DEL PEAK 36(14Q32.33) MUTATED DEL PEAK 36(14Q32.33) WILD-TYPE
  CLUS_1                            25                              58
  CLUS_2                            13                              44
  CLUS_3                             9                              35
  CLUS_4                            27                              57
  CLUS_5                            12                              34
  CLUS_6                            16                              35
  CLUS_7                            24                              25
  CLUS_8                             3                              15
  CLUS_9                            14                              40
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(14Q32.33) MUTATED       50     77     17
  DEL PEAK 36(14Q32.33) WILD-TYPE    129    154     61
D68V9, multiclass
        clus
vv       DEL PEAK 36(14Q32.33) MUTATED DEL PEAK 36(14Q32.33) WILD-TYPE
  CLUS_1                            50                             129
  CLUS_2                            77                             154
  CLUS_3                            17                              61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 36(14Q32.33) MUTATED       23     13     40     36     29      3
  DEL PEAK 36(14Q32.33) WILD-TYPE     48     31     78    101     54     32
D68V10, multiclass
        clus
vv       DEL PEAK 36(14Q32.33) MUTATED DEL PEAK 36(14Q32.33) WILD-TYPE
  CLUS_1                            23                              48
  CLUS_2                            13                              31
  CLUS_3                            40                              78
  CLUS_4                            36                             101
  CLUS_5                            29                              54
  CLUS_6                             3                              32
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(14Q32.33) MUTATED       43     65     17
  DEL PEAK 36(14Q32.33) WILD-TYPE    112    127     61
D68V11, multiclass
        clus
vv       DEL PEAK 36(14Q32.33) MUTATED DEL PEAK 36(14Q32.33) WILD-TYPE
  CLUS_1                            43                             112
  CLUS_2                            65                             127
  CLUS_3                            17                              61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(14Q32.33) MUTATED       51     71      3
  DEL PEAK 36(14Q32.33) WILD-TYPE    135    138     27
D68V12, multiclass
        clus
vv       DEL PEAK 36(14Q32.33) MUTATED DEL PEAK 36(14Q32.33) WILD-TYPE
  CLUS_1                            51                             135
  CLUS_2                            71                             138
  CLUS_3                             3                              27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(69) Variable = DEL PEAK 37(15Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(15Q11.2) MUTATED        4      7      4      4
  DEL PEAK 37(15Q11.2) WILD-TYPE      1      2      8      2
D69V1, multiclass
        clus
vv       DEL PEAK 37(15Q11.2) MUTATED DEL PEAK 37(15Q11.2) WILD-TYPE
  CLUS_1                            4                              1
  CLUS_2                            7                              2
  CLUS_3                            4                              8
  CLUS_4                            4                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(15Q11.2) MUTATED        6      8      5
  DEL PEAK 37(15Q11.2) WILD-TYPE      8      3      2
D69V2, multiclass
        clus
vv       DEL PEAK 37(15Q11.2) MUTATED DEL PEAK 37(15Q11.2) WILD-TYPE
  CLUS_1                            6                              8
  CLUS_2                            8                              3
  CLUS_3                            5                              2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(15Q11.2) MUTATED      122     74     57
  DEL PEAK 37(15Q11.2) WILD-TYPE     64    142     34
D69V3, multiclass
        clus
vv       DEL PEAK 37(15Q11.2) MUTATED DEL PEAK 37(15Q11.2) WILD-TYPE
  CLUS_1                          122                             64
  CLUS_2                           74                            142
  CLUS_3                           57                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(15Q11.2) MUTATED       28     69     74     47
  DEL PEAK 37(15Q11.2) WILD-TYPE     64     56     41     52
D69V4, multiclass
        clus
vv       DEL PEAK 37(15Q11.2) MUTATED DEL PEAK 37(15Q11.2) WILD-TYPE
  CLUS_1                           28                             64
  CLUS_2                           69                             56
  CLUS_3                           74                             41
  CLUS_4                           47                             52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(15Q11.2) MUTATED       56     27     36
  DEL PEAK 37(15Q11.2) WILD-TYPE     38     41     37
D69V5, multiclass
        clus
vv       DEL PEAK 37(15Q11.2) MUTATED DEL PEAK 37(15Q11.2) WILD-TYPE
  CLUS_1                           56                             38
  CLUS_2                           27                             41
  CLUS_3                           36                             37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(15Q11.2) MUTATED       67     24     28
  DEL PEAK 37(15Q11.2) WILD-TYPE     45     47     24
D69V6, multiclass
        clus
vv       DEL PEAK 37(15Q11.2) MUTATED DEL PEAK 37(15Q11.2) WILD-TYPE
  CLUS_1                           67                             45
  CLUS_2                           24                             47
  CLUS_3                           28                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 37(15Q11.2) MUTATED       96     43     15     68     26
  DEL PEAK 37(15Q11.2) WILD-TYPE     42     69     61     38     28
D69V7, multiclass
        clus
vv       DEL PEAK 37(15Q11.2) MUTATED DEL PEAK 37(15Q11.2) WILD-TYPE
  CLUS_1                           96                             42
  CLUS_2                           43                             69
  CLUS_3                           15                             61
  CLUS_4                           68                             38
  CLUS_5                           26                             28
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 37(15Q11.2) MUTATED       55     26     30     54     11     35
  DEL PEAK 37(15Q11.2) WILD-TYPE     28     31     14     30     35     16
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 37(15Q11.2) MUTATED       10      0     27
  DEL PEAK 37(15Q11.2) WILD-TYPE     39     18     27
D69V8, multiclass
        clus
vv       DEL PEAK 37(15Q11.2) MUTATED DEL PEAK 37(15Q11.2) WILD-TYPE
  CLUS_1                           55                             28
  CLUS_2                           26                             31
  CLUS_3                           30                             14
  CLUS_4                           54                             30
  CLUS_5                           11                             35
  CLUS_6                           35                             16
  CLUS_7                           10                             39
  CLUS_8                            0                             18
  CLUS_9                           27                             27
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(15Q11.2) MUTATED       68    136     47
  DEL PEAK 37(15Q11.2) WILD-TYPE    111     95     31
D69V9, multiclass
        clus
vv       DEL PEAK 37(15Q11.2) MUTATED DEL PEAK 37(15Q11.2) WILD-TYPE
  CLUS_1                           68                            111
  CLUS_2                          136                             95
  CLUS_3                           47                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 37(15Q11.2) MUTATED       30     29     67     63     45     17
  DEL PEAK 37(15Q11.2) WILD-TYPE     41     15     51     74     38     18
D69V10, multiclass
        clus
vv       DEL PEAK 37(15Q11.2) MUTATED DEL PEAK 37(15Q11.2) WILD-TYPE
  CLUS_1                           30                             41
  CLUS_2                           29                             15
  CLUS_3                           67                             51
  CLUS_4                           63                             74
  CLUS_5                           45                             38
  CLUS_6                           17                             18
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(15Q11.2) MUTATED       68    105     42
  DEL PEAK 37(15Q11.2) WILD-TYPE     87     87     36
D69V11, multiclass
        clus
vv       DEL PEAK 37(15Q11.2) MUTATED DEL PEAK 37(15Q11.2) WILD-TYPE
  CLUS_1                           68                             87
  CLUS_2                          105                             87
  CLUS_3                           42                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(15Q11.2) MUTATED       77    121     17
  DEL PEAK 37(15Q11.2) WILD-TYPE    109     88     13
D69V12, multiclass
        clus
vv       DEL PEAK 37(15Q11.2) MUTATED DEL PEAK 37(15Q11.2) WILD-TYPE
  CLUS_1                           77                            109
  CLUS_2                          121                             88
  CLUS_3                           17                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(70) Variable = DEL PEAK 38(16Q23.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(16Q23.1) MUTATED        4      2      2      1
  DEL PEAK 38(16Q23.1) WILD-TYPE      1      7     10      5
D70V1, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                            4                              1
  CLUS_2                            2                              7
  CLUS_3                            2                             10
  CLUS_4                            1                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(16Q23.1) MUTATED        3      4      2
  DEL PEAK 38(16Q23.1) WILD-TYPE     11      7      5
D70V2, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                            3                             11
  CLUS_2                            4                              7
  CLUS_3                            2                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(16Q23.1) MUTATED       81     48     38
  DEL PEAK 38(16Q23.1) WILD-TYPE    105    168     53
D70V3, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                           81                            105
  CLUS_2                           48                            168
  CLUS_3                           38                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(16Q23.1) MUTATED       11     50     53     30
  DEL PEAK 38(16Q23.1) WILD-TYPE     81     75     62     69
D70V4, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                           11                             81
  CLUS_2                           50                             75
  CLUS_3                           53                             62
  CLUS_4                           30                             69
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(16Q23.1) MUTATED       33     16     34
  DEL PEAK 38(16Q23.1) WILD-TYPE     61     52     39
D70V5, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                           33                             61
  CLUS_2                           16                             52
  CLUS_3                           34                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(16Q23.1) MUTATED       48     14     21
  DEL PEAK 38(16Q23.1) WILD-TYPE     64     57     31
D70V6, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                           48                             64
  CLUS_2                           14                             57
  CLUS_3                           21                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 38(16Q23.1) MUTATED       69     19     26     40     11
  DEL PEAK 38(16Q23.1) WILD-TYPE     69     93     50     66     43
D70V7, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                           69                             69
  CLUS_2                           19                             93
  CLUS_3                           26                             50
  CLUS_4                           40                             66
  CLUS_5                           11                             43
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 38(16Q23.1) MUTATED       42     10     24     35      9     17
  DEL PEAK 38(16Q23.1) WILD-TYPE     41     47     20     49     37     34
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 38(16Q23.1) MUTATED       17      0     11
  DEL PEAK 38(16Q23.1) WILD-TYPE     32     18     43
D70V8, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                           42                             41
  CLUS_2                           10                             47
  CLUS_3                           24                             20
  CLUS_4                           35                             49
  CLUS_5                            9                             37
  CLUS_6                           17                             34
  CLUS_7                           17                             32
  CLUS_8                            0                             18
  CLUS_9                           11                             43
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(16Q23.1) MUTATED       49     91     27
  DEL PEAK 38(16Q23.1) WILD-TYPE    130    140     51
D70V9, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                           49                            130
  CLUS_2                           91                            140
  CLUS_3                           27                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 38(16Q23.1) MUTATED       21     11     50     36     38     11
  DEL PEAK 38(16Q23.1) WILD-TYPE     50     33     68    101     45     24
D70V10, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                           21                             50
  CLUS_2                           11                             33
  CLUS_3                           50                             68
  CLUS_4                           36                            101
  CLUS_5                           38                             45
  CLUS_6                           11                             24
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(16Q23.1) MUTATED       42     77     23
  DEL PEAK 38(16Q23.1) WILD-TYPE    113    115     55
D70V11, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                           42                            113
  CLUS_2                           77                            115
  CLUS_3                           23                             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(16Q23.1) MUTATED       45     88      9
  DEL PEAK 38(16Q23.1) WILD-TYPE    141    121     21
D70V12, multiclass
        clus
vv       DEL PEAK 38(16Q23.1) MUTATED DEL PEAK 38(16Q23.1) WILD-TYPE
  CLUS_1                           45                            141
  CLUS_2                           88                            121
  CLUS_3                            9                             21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(71) Variable = DEL PEAK 39(17P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(17P13.3) MUTATED        5      6      7      5
  DEL PEAK 39(17P13.3) WILD-TYPE      0      3      5      1
D71V1, multiclass
        clus
vv       DEL PEAK 39(17P13.3) MUTATED DEL PEAK 39(17P13.3) WILD-TYPE
  CLUS_1                            5                              0
  CLUS_2                            6                              3
  CLUS_3                            7                              5
  CLUS_4                            5                              1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17P13.3) MUTATED        9      8      6
  DEL PEAK 39(17P13.3) WILD-TYPE      5      3      1
D71V2, multiclass
        clus
vv       DEL PEAK 39(17P13.3) MUTATED DEL PEAK 39(17P13.3) WILD-TYPE
  CLUS_1                            9                              5
  CLUS_2                            8                              3
  CLUS_3                            6                              1
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17P13.3) MUTATED      142     71     52
  DEL PEAK 39(17P13.3) WILD-TYPE     44    145     39
D71V3, multiclass
        clus
vv       DEL PEAK 39(17P13.3) MUTATED DEL PEAK 39(17P13.3) WILD-TYPE
  CLUS_1                          142                             44
  CLUS_2                           71                            145
  CLUS_3                           52                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(17P13.3) MUTATED       30     70     83     46
  DEL PEAK 39(17P13.3) WILD-TYPE     62     55     32     53
D71V4, multiclass
        clus
vv       DEL PEAK 39(17P13.3) MUTATED DEL PEAK 39(17P13.3) WILD-TYPE
  CLUS_1                           30                             62
  CLUS_2                           70                             55
  CLUS_3                           83                             32
  CLUS_4                           46                             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17P13.3) MUTATED       63     33     43
  DEL PEAK 39(17P13.3) WILD-TYPE     31     35     30
D71V5, multiclass
        clus
vv       DEL PEAK 39(17P13.3) MUTATED DEL PEAK 39(17P13.3) WILD-TYPE
  CLUS_1                           63                             31
  CLUS_2                           33                             35
  CLUS_3                           43                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17P13.3) MUTATED       77     31     31
  DEL PEAK 39(17P13.3) WILD-TYPE     35     40     21
D71V6, multiclass
        clus
vv       DEL PEAK 39(17P13.3) MUTATED DEL PEAK 39(17P13.3) WILD-TYPE
  CLUS_1                           77                             35
  CLUS_2                           31                             40
  CLUS_3                           31                             21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 39(17P13.3) MUTATED       98     42     36     61     24
  DEL PEAK 39(17P13.3) WILD-TYPE     40     70     40     45     30
D71V7, multiclass
        clus
vv       DEL PEAK 39(17P13.3) MUTATED DEL PEAK 39(17P13.3) WILD-TYPE
  CLUS_1                           98                             40
  CLUS_2                           42                             70
  CLUS_3                           36                             40
  CLUS_4                           61                             45
  CLUS_5                           24                             30
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 39(17P13.3) MUTATED       59     26     27     51     10     33
  DEL PEAK 39(17P13.3) WILD-TYPE     24     31     17     33     36     18
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 39(17P13.3) MUTATED       22      6     27
  DEL PEAK 39(17P13.3) WILD-TYPE     27     12     27
D71V8, multiclass
        clus
vv       DEL PEAK 39(17P13.3) MUTATED DEL PEAK 39(17P13.3) WILD-TYPE
  CLUS_1                           59                             24
  CLUS_2                           26                             31
  CLUS_3                           27                             17
  CLUS_4                           51                             33
  CLUS_5                           10                             36
  CLUS_6                           33                             18
  CLUS_7                           22                             27
  CLUS_8                            6                             12
  CLUS_9                           27                             27
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17P13.3) MUTATED       82    141     39
  DEL PEAK 39(17P13.3) WILD-TYPE     97     90     39
D71V9, multiclass
        clus
vv       DEL PEAK 39(17P13.3) MUTATED DEL PEAK 39(17P13.3) WILD-TYPE
  CLUS_1                           82                             97
  CLUS_2                          141                             90
  CLUS_3                           39                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 39(17P13.3) MUTATED       30     25     68     71     51     17
  DEL PEAK 39(17P13.3) WILD-TYPE     41     19     50     66     32     18
D71V10, multiclass
        clus
vv       DEL PEAK 39(17P13.3) MUTATED DEL PEAK 39(17P13.3) WILD-TYPE
  CLUS_1                           30                             41
  CLUS_2                           25                             19
  CLUS_3                           68                             50
  CLUS_4                           71                             66
  CLUS_5                           51                             32
  CLUS_6                           17                             18
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17P13.3) MUTATED       73    113     39
  DEL PEAK 39(17P13.3) WILD-TYPE     82     79     39
D71V11, multiclass
        clus
vv       DEL PEAK 39(17P13.3) MUTATED DEL PEAK 39(17P13.3) WILD-TYPE
  CLUS_1                           73                             82
  CLUS_2                          113                             79
  CLUS_3                           39                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17P13.3) MUTATED       84    129     12
  DEL PEAK 39(17P13.3) WILD-TYPE    102     80     18
D71V12, multiclass
        clus
vv       DEL PEAK 39(17P13.3) MUTATED DEL PEAK 39(17P13.3) WILD-TYPE
  CLUS_1                           84                            102
  CLUS_2                          129                             80
  CLUS_3                           12                             18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(72) Variable = DEL PEAK 40(17P11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(17P11.2) MUTATED        4      6      4      4
  DEL PEAK 40(17P11.2) WILD-TYPE      1      3      8      2
D72V1, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                            4                              1
  CLUS_2                            6                              3
  CLUS_3                            4                              8
  CLUS_4                            4                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(17P11.2) MUTATED        6      8      4
  DEL PEAK 40(17P11.2) WILD-TYPE      8      3      3
D72V2, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                            6                              8
  CLUS_2                            8                              3
  CLUS_3                            4                              3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(17P11.2) MUTATED      119     50     47
  DEL PEAK 40(17P11.2) WILD-TYPE     67    166     44
D72V3, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                          119                             67
  CLUS_2                           50                            166
  CLUS_3                           47                             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(17P11.2) MUTATED       27     49     75     34
  DEL PEAK 40(17P11.2) WILD-TYPE     65     76     40     65
D72V4, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                           27                             65
  CLUS_2                           49                             76
  CLUS_3                           75                             40
  CLUS_4                           34                             65
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(17P11.2) MUTATED       57     25     38
  DEL PEAK 40(17P11.2) WILD-TYPE     37     43     35
D72V5, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                           57                             37
  CLUS_2                           25                             43
  CLUS_3                           38                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(17P11.2) MUTATED       67     24     29
  DEL PEAK 40(17P11.2) WILD-TYPE     45     47     23
D72V6, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                           67                             45
  CLUS_2                           24                             47
  CLUS_3                           29                             23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 40(17P11.2) MUTATED       84     32     32     48     18
  DEL PEAK 40(17P11.2) WILD-TYPE     54     80     44     58     36
D72V7, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                           84                             54
  CLUS_2                           32                             80
  CLUS_3                           32                             44
  CLUS_4                           48                             58
  CLUS_5                           18                             36
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 40(17P11.2) MUTATED       52     19     25     47      8     21
  DEL PEAK 40(17P11.2) WILD-TYPE     31     38     19     37     38     30
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 40(17P11.2) MUTATED       17      6     19
  DEL PEAK 40(17P11.2) WILD-TYPE     32     12     35
D72V8, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                           52                             31
  CLUS_2                           19                             38
  CLUS_3                           25                             19
  CLUS_4                           47                             37
  CLUS_5                            8                             38
  CLUS_6                           21                             30
  CLUS_7                           17                             32
  CLUS_8                            6                             12
  CLUS_9                           19                             35
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(17P11.2) MUTATED       64    113     37
  DEL PEAK 40(17P11.2) WILD-TYPE    115    118     41
D72V9, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                           64                            115
  CLUS_2                          113                            118
  CLUS_3                           37                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 40(17P11.2) MUTATED       23     16     59     56     46     14
  DEL PEAK 40(17P11.2) WILD-TYPE     48     28     59     81     37     21
D72V10, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                           23                             48
  CLUS_2                           16                             28
  CLUS_3                           59                             59
  CLUS_4                           56                             81
  CLUS_5                           46                             37
  CLUS_6                           14                             21
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(17P11.2) MUTATED       58     92     34
  DEL PEAK 40(17P11.2) WILD-TYPE     97    100     44
D72V11, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                           58                             97
  CLUS_2                           92                            100
  CLUS_3                           34                             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(17P11.2) MUTATED       65    107     12
  DEL PEAK 40(17P11.2) WILD-TYPE    121    102     18
D72V12, multiclass
        clus
vv       DEL PEAK 40(17P11.2) MUTATED DEL PEAK 40(17P11.2) WILD-TYPE
  CLUS_1                           65                            121
  CLUS_2                          107                            102
  CLUS_3                           12                             18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(73) Variable = DEL PEAK 41(18Q21.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(18Q21.32) MUTATED        3      7      3      3
  DEL PEAK 41(18Q21.32) WILD-TYPE      2      2      9      3
D73V1, multiclass
        clus
vv       DEL PEAK 41(18Q21.32) MUTATED DEL PEAK 41(18Q21.32) WILD-TYPE
  CLUS_1                             3                               2
  CLUS_2                             7                               2
  CLUS_3                             3                               9
  CLUS_4                             3                               3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(18Q21.32) MUTATED        4      8      4
  DEL PEAK 41(18Q21.32) WILD-TYPE     10      3      3
D73V2, multiclass
        clus
vv       DEL PEAK 41(18Q21.32) MUTATED DEL PEAK 41(18Q21.32) WILD-TYPE
  CLUS_1                             4                              10
  CLUS_2                             8                               3
  CLUS_3                             4                               3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(18Q21.32) MUTATED      131     77     33
  DEL PEAK 41(18Q21.32) WILD-TYPE     55    139     58
D73V3, multiclass
        clus
vv       DEL PEAK 41(18Q21.32) MUTATED DEL PEAK 41(18Q21.32) WILD-TYPE
  CLUS_1                           131                              55
  CLUS_2                            77                             139
  CLUS_3                            33                              58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(18Q21.32) MUTATED       43     61     62     47
  DEL PEAK 41(18Q21.32) WILD-TYPE     49     64     53     52
D73V4, multiclass
        clus
vv       DEL PEAK 41(18Q21.32) MUTATED DEL PEAK 41(18Q21.32) WILD-TYPE
  CLUS_1                            43                              49
  CLUS_2                            61                              64
  CLUS_3                            62                              53
  CLUS_4                            47                              52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(18Q21.32) MUTATED       59     27     39
  DEL PEAK 41(18Q21.32) WILD-TYPE     35     41     34
D73V5, multiclass
        clus
vv       DEL PEAK 41(18Q21.32) MUTATED DEL PEAK 41(18Q21.32) WILD-TYPE
  CLUS_1                            59                              35
  CLUS_2                            27                              41
  CLUS_3                            39                              34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(18Q21.32) MUTATED       72     28     25
  DEL PEAK 41(18Q21.32) WILD-TYPE     40     43     27
D73V6, multiclass
        clus
vv       DEL PEAK 41(18Q21.32) MUTATED DEL PEAK 41(18Q21.32) WILD-TYPE
  CLUS_1                            72                              40
  CLUS_2                            28                              43
  CLUS_3                            25                              27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 41(18Q21.32) MUTATED       91     42     40     42     23
  DEL PEAK 41(18Q21.32) WILD-TYPE     47     70     36     64     31
D73V7, multiclass
        clus
vv       DEL PEAK 41(18Q21.32) MUTATED DEL PEAK 41(18Q21.32) WILD-TYPE
  CLUS_1                            91                              47
  CLUS_2                            42                              70
  CLUS_3                            40                              36
  CLUS_4                            42                              64
  CLUS_5                            23                              31
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 41(18Q21.32) MUTATED       44     28     28     51      9     17
  DEL PEAK 41(18Q21.32) WILD-TYPE     39     29     16     33     37     34
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 41(18Q21.32) MUTATED       30      9     22
  DEL PEAK 41(18Q21.32) WILD-TYPE     19      9     32
D73V8, multiclass
        clus
vv       DEL PEAK 41(18Q21.32) MUTATED DEL PEAK 41(18Q21.32) WILD-TYPE
  CLUS_1                            44                              39
  CLUS_2                            28                              29
  CLUS_3                            28                              16
  CLUS_4                            51                              33
  CLUS_5                             9                              37
  CLUS_6                            17                              34
  CLUS_7                            30                              19
  CLUS_8                             9                               9
  CLUS_9                            22                              32
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(18Q21.32) MUTATED       71    122     45
  DEL PEAK 41(18Q21.32) WILD-TYPE    108    109     33
D73V9, multiclass
        clus
vv       DEL PEAK 41(18Q21.32) MUTATED DEL PEAK 41(18Q21.32) WILD-TYPE
  CLUS_1                            71                             108
  CLUS_2                           122                             109
  CLUS_3                            45                              33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 41(18Q21.32) MUTATED       29     17     70     64     43     15
  DEL PEAK 41(18Q21.32) WILD-TYPE     42     27     48     73     40     20
D73V10, multiclass
        clus
vv       DEL PEAK 41(18Q21.32) MUTATED DEL PEAK 41(18Q21.32) WILD-TYPE
  CLUS_1                            29                              42
  CLUS_2                            17                              27
  CLUS_3                            70                              48
  CLUS_4                            64                              73
  CLUS_5                            43                              40
  CLUS_6                            15                              20
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(18Q21.32) MUTATED       68    101     39
  DEL PEAK 41(18Q21.32) WILD-TYPE     87     91     39
D73V11, multiclass
        clus
vv       DEL PEAK 41(18Q21.32) MUTATED DEL PEAK 41(18Q21.32) WILD-TYPE
  CLUS_1                            68                              87
  CLUS_2                           101                              91
  CLUS_3                            39                              39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(18Q21.32) MUTATED       82    113     13
  DEL PEAK 41(18Q21.32) WILD-TYPE    104     96     17
D73V12, multiclass
        clus
vv       DEL PEAK 41(18Q21.32) MUTATED DEL PEAK 41(18Q21.32) WILD-TYPE
  CLUS_1                            82                             104
  CLUS_2                           113                              96
  CLUS_3                            13                              17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(74) Variable = DEL PEAK 42(18Q23) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(18Q23) MUTATED        3      8      3      3
  DEL PEAK 42(18Q23) WILD-TYPE      2      1      9      3
D74V1, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                          3                            2
  CLUS_2                          8                            1
  CLUS_3                          3                            9
  CLUS_4                          3                            3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q23) MUTATED        4      9      4
  DEL PEAK 42(18Q23) WILD-TYPE     10      2      3
D74V2, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                          4                           10
  CLUS_2                          9                            2
  CLUS_3                          4                            3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q23) MUTATED      133     75     30
  DEL PEAK 42(18Q23) WILD-TYPE     53    141     61
D74V3, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                        133                           53
  CLUS_2                         75                          141
  CLUS_3                         30                           61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(18Q23) MUTATED       41     59     62     47
  DEL PEAK 42(18Q23) WILD-TYPE     51     66     53     52
D74V4, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         41                           51
  CLUS_2                         59                           66
  CLUS_3                         62                           53
  CLUS_4                         47                           52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q23) MUTATED       58     24     37
  DEL PEAK 42(18Q23) WILD-TYPE     36     44     36
D74V5, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         58                           36
  CLUS_2                         24                           44
  CLUS_3                         37                           36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q23) MUTATED       68     26     25
  DEL PEAK 42(18Q23) WILD-TYPE     44     45     27
D74V6, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         68                           44
  CLUS_2                         26                           45
  CLUS_3                         25                           27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 42(18Q23) MUTATED       92     42     40     38     23
  DEL PEAK 42(18Q23) WILD-TYPE     46     70     36     68     31
D74V7, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         92                           46
  CLUS_2                         42                           70
  CLUS_3                         40                           36
  CLUS_4                         38                           68
  CLUS_5                         23                           31
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 42(18Q23) MUTATED       42     27     29     50      9     17     30
  DEL PEAK 42(18Q23) WILD-TYPE     41     30     15     34     37     34     19
                              vv
clus                           CLUS_8 CLUS_9
  DEL PEAK 42(18Q23) MUTATED        9     22
  DEL PEAK 42(18Q23) WILD-TYPE      9     32
D74V8, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         42                           41
  CLUS_2                         27                           30
  CLUS_3                         29                           15
  CLUS_4                         50                           34
  CLUS_5                          9                           37
  CLUS_6                         17                           34
  CLUS_7                         30                           19
  CLUS_8                          9                            9
  CLUS_9                         22                           32
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q23) MUTATED       69    120     46
  DEL PEAK 42(18Q23) WILD-TYPE    110    111     32
D74V9, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         69                          110
  CLUS_2                        120                          111
  CLUS_3                         46                           32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 42(18Q23) MUTATED       30     18     69     60     43     15
  DEL PEAK 42(18Q23) WILD-TYPE     41     26     49     77     40     20
D74V10, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         30                           41
  CLUS_2                         18                           26
  CLUS_3                         69                           49
  CLUS_4                         60                           77
  CLUS_5                         43                           40
  CLUS_6                         15                           20
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q23) MUTATED       64    101     39
  DEL PEAK 42(18Q23) WILD-TYPE     91     91     39
D74V11, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         64                           91
  CLUS_2                        101                           91
  CLUS_3                         39                           39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q23) MUTATED       79    112     13
  DEL PEAK 42(18Q23) WILD-TYPE    107     97     17
D74V12, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         79                          107
  CLUS_2                        112                           97
  CLUS_3                         13                           17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(75) Variable = DEL PEAK 43(19P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(19P13.3) MUTATED        1      4      5      4
  DEL PEAK 43(19P13.3) WILD-TYPE      4      5      7      2
D75V1, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            4                              5
  CLUS_3                            5                              7
  CLUS_4                            4                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(19P13.3) MUTATED        6      4      4
  DEL PEAK 43(19P13.3) WILD-TYPE      8      7      3
D75V2, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                            6                              8
  CLUS_2                            4                              7
  CLUS_3                            4                              3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(19P13.3) MUTATED      105     92     68
  DEL PEAK 43(19P13.3) WILD-TYPE     81    124     23
D75V3, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                          105                             81
  CLUS_2                           92                            124
  CLUS_3                           68                             23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(19P13.3) MUTATED       35     96     50     49
  DEL PEAK 43(19P13.3) WILD-TYPE     57     29     65     50
D75V4, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                           35                             57
  CLUS_2                           96                             29
  CLUS_3                           50                             65
  CLUS_4                           49                             50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(19P13.3) MUTATED       52     35     48
  DEL PEAK 43(19P13.3) WILD-TYPE     42     33     25
D75V5, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                           52                             42
  CLUS_2                           35                             33
  CLUS_3                           48                             25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(19P13.3) MUTATED       62     36     37
  DEL PEAK 43(19P13.3) WILD-TYPE     50     35     15
D75V6, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                           62                             50
  CLUS_2                           36                             35
  CLUS_3                           37                             15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 43(19P13.3) MUTATED       70     49     50     76     17
  DEL PEAK 43(19P13.3) WILD-TYPE     68     63     26     30     37
D75V7, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                           70                             68
  CLUS_2                           49                             63
  CLUS_3                           50                             26
  CLUS_4                           76                             30
  CLUS_5                           17                             37
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 43(19P13.3) MUTATED       29     20     22     56     37     34
  DEL PEAK 43(19P13.3) WILD-TYPE     54     37     22     28      9     17
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 43(19P13.3) MUTATED       43      4     17
  DEL PEAK 43(19P13.3) WILD-TYPE      6     14     37
D75V8, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                           29                             54
  CLUS_2                           20                             37
  CLUS_3                           22                             22
  CLUS_4                           56                             28
  CLUS_5                           37                              9
  CLUS_6                           34                             17
  CLUS_7                           43                              6
  CLUS_8                            4                             14
  CLUS_9                           17                             37
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(19P13.3) MUTATED       78    149     33
  DEL PEAK 43(19P13.3) WILD-TYPE    101     82     45
D75V9, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                           78                            101
  CLUS_2                          149                             82
  CLUS_3                           33                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 43(19P13.3) MUTATED       36     27     74     49     60     14
  DEL PEAK 43(19P13.3) WILD-TYPE     35     17     44     88     23     21
D75V10, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                           36                             35
  CLUS_2                           27                             17
  CLUS_3                           74                             44
  CLUS_4                           49                             88
  CLUS_5                           60                             23
  CLUS_6                           14                             21
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(19P13.3) MUTATED       71    125     33
  DEL PEAK 43(19P13.3) WILD-TYPE     84     67     45
D75V11, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                           71                             84
  CLUS_2                          125                             67
  CLUS_3                           33                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(19P13.3) MUTATED       80    139     10
  DEL PEAK 43(19P13.3) WILD-TYPE    106     70     20
D75V12, multiclass
        clus
vv       DEL PEAK 43(19P13.3) MUTATED DEL PEAK 43(19P13.3) WILD-TYPE
  CLUS_1                           80                            106
  CLUS_2                          139                             70
  CLUS_3                           10                             20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(76) Variable = DEL PEAK 44(19P13.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(19P13.2) MUTATED        1      5      5      3
  DEL PEAK 44(19P13.2) WILD-TYPE      4      4      7      3
D76V1, multiclass
        clus
vv       DEL PEAK 44(19P13.2) MUTATED DEL PEAK 44(19P13.2) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            5                              4
  CLUS_3                            5                              7
  CLUS_4                            3                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.2) MUTATED        6      5      3
  DEL PEAK 44(19P13.2) WILD-TYPE      8      6      4
D76V2, multiclass
        clus
vv       DEL PEAK 44(19P13.2) MUTATED DEL PEAK 44(19P13.2) WILD-TYPE
  CLUS_1                            6                              8
  CLUS_2                            5                              6
  CLUS_3                            3                              4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.2) MUTATED      107     87     66
  DEL PEAK 44(19P13.2) WILD-TYPE     79    129     25
D76V3, multiclass
        clus
vv       DEL PEAK 44(19P13.2) MUTATED DEL PEAK 44(19P13.2) WILD-TYPE
  CLUS_1                          107                             79
  CLUS_2                           87                            129
  CLUS_3                           66                             25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(19P13.2) MUTATED       32     97     53     44
  DEL PEAK 44(19P13.2) WILD-TYPE     60     28     62     55
D76V4, multiclass
        clus
vv       DEL PEAK 44(19P13.2) MUTATED DEL PEAK 44(19P13.2) WILD-TYPE
  CLUS_1                           32                             60
  CLUS_2                           97                             28
  CLUS_3                           53                             62
  CLUS_4                           44                             55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.2) MUTATED       48     33     45
  DEL PEAK 44(19P13.2) WILD-TYPE     46     35     28
D76V5, multiclass
        clus
vv       DEL PEAK 44(19P13.2) MUTATED DEL PEAK 44(19P13.2) WILD-TYPE
  CLUS_1                           48                             46
  CLUS_2                           33                             35
  CLUS_3                           45                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.2) MUTATED       56     34     36
  DEL PEAK 44(19P13.2) WILD-TYPE     56     37     16
D76V6, multiclass
        clus
vv       DEL PEAK 44(19P13.2) MUTATED DEL PEAK 44(19P13.2) WILD-TYPE
  CLUS_1                           56                             56
  CLUS_2                           34                             37
  CLUS_3                           36                             16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 44(19P13.2) MUTATED       71     47     45     77     17
  DEL PEAK 44(19P13.2) WILD-TYPE     67     65     31     29     37
D76V7, multiclass
        clus
vv       DEL PEAK 44(19P13.2) MUTATED DEL PEAK 44(19P13.2) WILD-TYPE
  CLUS_1                           71                             67
  CLUS_2                           47                             65
  CLUS_3                           45                             31
  CLUS_4                           77                             29
  CLUS_5                           17                             37
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 44(19P13.2) MUTATED       31     18     23     48     36     40
  DEL PEAK 44(19P13.2) WILD-TYPE     52     39     21     36     10     11
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 44(19P13.2) MUTATED       39      4     18
  DEL PEAK 44(19P13.2) WILD-TYPE     10     14     36
D76V8, multiclass
        clus
vv       DEL PEAK 44(19P13.2) MUTATED DEL PEAK 44(19P13.2) WILD-TYPE
  CLUS_1                           31                             52
  CLUS_2                           18                             39
  CLUS_3                           23                             21
  CLUS_4                           48                             36
  CLUS_5                           36                             10
  CLUS_6                           40                             11
  CLUS_7                           39                             10
  CLUS_8                            4                             14
  CLUS_9                           18                             36
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.2) MUTATED       76    147     32
  DEL PEAK 44(19P13.2) WILD-TYPE    103     84     46
D76V9, multiclass
        clus
vv       DEL PEAK 44(19P13.2) MUTATED DEL PEAK 44(19P13.2) WILD-TYPE
  CLUS_1                           76                            103
  CLUS_2                          147                             84
  CLUS_3                           32                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 44(19P13.2) MUTATED       37     27     72     49     58     12
  DEL PEAK 44(19P13.2) WILD-TYPE     34     17     46     88     25     23
D76V10, multiclass
        clus
vv       DEL PEAK 44(19P13.2) MUTATED DEL PEAK 44(19P13.2) WILD-TYPE
  CLUS_1                           37                             34
  CLUS_2                           27                             17
  CLUS_3                           72                             46
  CLUS_4                           49                             88
  CLUS_5                           58                             25
  CLUS_6                           12                             23
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.2) MUTATED       68    124     33
  DEL PEAK 44(19P13.2) WILD-TYPE     87     68     45
D76V11, multiclass
        clus
vv       DEL PEAK 44(19P13.2) MUTATED DEL PEAK 44(19P13.2) WILD-TYPE
  CLUS_1                           68                             87
  CLUS_2                          124                             68
  CLUS_3                           33                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.2) MUTATED       79    137      9
  DEL PEAK 44(19P13.2) WILD-TYPE    107     72     21
D76V12, multiclass
        clus
vv       DEL PEAK 44(19P13.2) MUTATED DEL PEAK 44(19P13.2) WILD-TYPE
  CLUS_1                           79                            107
  CLUS_2                          137                             72
  CLUS_3                            9                             21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(77) Variable = DEL PEAK 45(19Q13.33) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(19Q13.33) MUTATED        2      6      3      3
  DEL PEAK 45(19Q13.33) WILD-TYPE      3      3      9      3
D77V1, multiclass
        clus
vv       DEL PEAK 45(19Q13.33) MUTATED DEL PEAK 45(19Q13.33) WILD-TYPE
  CLUS_1                             2                               3
  CLUS_2                             6                               3
  CLUS_3                             3                               9
  CLUS_4                             3                               3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q13.33) MUTATED        4      7      3
  DEL PEAK 45(19Q13.33) WILD-TYPE     10      4      4
D77V2, multiclass
        clus
vv       DEL PEAK 45(19Q13.33) MUTATED DEL PEAK 45(19Q13.33) WILD-TYPE
  CLUS_1                             4                              10
  CLUS_2                             7                               4
  CLUS_3                             3                               4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q13.33) MUTATED       97     51     39
  DEL PEAK 45(19Q13.33) WILD-TYPE     89    165     52
D77V3, multiclass
        clus
vv       DEL PEAK 45(19Q13.33) MUTATED DEL PEAK 45(19Q13.33) WILD-TYPE
  CLUS_1                            97                              89
  CLUS_2                            51                             165
  CLUS_3                            39                              52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(19Q13.33) MUTATED       25     59     46     26
  DEL PEAK 45(19Q13.33) WILD-TYPE     67     66     69     73
D77V4, multiclass
        clus
vv       DEL PEAK 45(19Q13.33) MUTATED DEL PEAK 45(19Q13.33) WILD-TYPE
  CLUS_1                            25                              67
  CLUS_2                            59                              66
  CLUS_3                            46                              69
  CLUS_4                            26                              73
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q13.33) MUTATED       43     20     30
  DEL PEAK 45(19Q13.33) WILD-TYPE     51     48     43
D77V5, multiclass
        clus
vv       DEL PEAK 45(19Q13.33) MUTATED DEL PEAK 45(19Q13.33) WILD-TYPE
  CLUS_1                            43                              51
  CLUS_2                            20                              48
  CLUS_3                            30                              43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q13.33) MUTATED       49     24     20
  DEL PEAK 45(19Q13.33) WILD-TYPE     63     47     32
D77V6, multiclass
        clus
vv       DEL PEAK 45(19Q13.33) MUTATED DEL PEAK 45(19Q13.33) WILD-TYPE
  CLUS_1                            49                              63
  CLUS_2                            24                              47
  CLUS_3                            20                              32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 45(19Q13.33) MUTATED       61     33     27     52     12
  DEL PEAK 45(19Q13.33) WILD-TYPE     77     79     49     54     42
D77V7, multiclass
        clus
vv       DEL PEAK 45(19Q13.33) MUTATED DEL PEAK 45(19Q13.33) WILD-TYPE
  CLUS_1                            61                              77
  CLUS_2                            33                              79
  CLUS_3                            27                              49
  CLUS_4                            52                              54
  CLUS_5                            12                              42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 45(19Q13.33) MUTATED       29     16     21     40     22     24
  DEL PEAK 45(19Q13.33) WILD-TYPE     54     41     23     44     24     27
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 45(19Q13.33) MUTATED       23      0     10
  DEL PEAK 45(19Q13.33) WILD-TYPE     26     18     44
D77V8, multiclass
        clus
vv       DEL PEAK 45(19Q13.33) MUTATED DEL PEAK 45(19Q13.33) WILD-TYPE
  CLUS_1                            29                              54
  CLUS_2                            16                              41
  CLUS_3                            21                              23
  CLUS_4                            40                              44
  CLUS_5                            22                              24
  CLUS_6                            24                              27
  CLUS_7                            23                              26
  CLUS_8                             0                              18
  CLUS_9                            10                              44
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q13.33) MUTATED       47    106     30
  DEL PEAK 45(19Q13.33) WILD-TYPE    132    125     48
D77V9, multiclass
        clus
vv       DEL PEAK 45(19Q13.33) MUTATED DEL PEAK 45(19Q13.33) WILD-TYPE
  CLUS_1                            47                             132
  CLUS_2                           106                             125
  CLUS_3                            30                              48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 45(19Q13.33) MUTATED       23     24     53     30     39     14
  DEL PEAK 45(19Q13.33) WILD-TYPE     48     20     65    107     44     21
D77V10, multiclass
        clus
vv       DEL PEAK 45(19Q13.33) MUTATED DEL PEAK 45(19Q13.33) WILD-TYPE
  CLUS_1                            23                              48
  CLUS_2                            24                              20
  CLUS_3                            53                              65
  CLUS_4                            30                             107
  CLUS_5                            39                              44
  CLUS_6                            14                              21
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q13.33) MUTATED       45     76     31
  DEL PEAK 45(19Q13.33) WILD-TYPE    110    116     47
D77V11, multiclass
        clus
vv       DEL PEAK 45(19Q13.33) MUTATED DEL PEAK 45(19Q13.33) WILD-TYPE
  CLUS_1                            45                             110
  CLUS_2                            76                             116
  CLUS_3                            31                              47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q13.33) MUTATED       47     94     11
  DEL PEAK 45(19Q13.33) WILD-TYPE    139    115     19
D77V12, multiclass
        clus
vv       DEL PEAK 45(19Q13.33) MUTATED DEL PEAK 45(19Q13.33) WILD-TYPE
  CLUS_1                            47                             139
  CLUS_2                            94                             115
  CLUS_3                            11                              19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(78) Variable = DEL PEAK 46(20P13) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(20P13) MUTATED        3      4      1      2
  DEL PEAK 46(20P13) WILD-TYPE      2      5     11      4
D78V1, multiclass
        clus
vv       DEL PEAK 46(20P13) MUTATED DEL PEAK 46(20P13) WILD-TYPE
  CLUS_1                          3                            2
  CLUS_2                          4                            5
  CLUS_3                          1                           11
  CLUS_4                          2                            4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(20P13) MUTATED        2      5      3
  DEL PEAK 46(20P13) WILD-TYPE     12      6      4
D78V2, multiclass
        clus
vv       DEL PEAK 46(20P13) MUTATED DEL PEAK 46(20P13) WILD-TYPE
  CLUS_1                          2                           12
  CLUS_2                          5                            6
  CLUS_3                          3                            4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(20P13) MUTATED       71     39     16
  DEL PEAK 46(20P13) WILD-TYPE    115    177     75
D78V3, multiclass
        clus
vv       DEL PEAK 46(20P13) MUTATED DEL PEAK 46(20P13) WILD-TYPE
  CLUS_1                         71                          115
  CLUS_2                         39                          177
  CLUS_3                         16                           75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(20P13) MUTATED       19     23     47     22
  DEL PEAK 46(20P13) WILD-TYPE     73    102     68     77
D78V4, multiclass
        clus
vv       DEL PEAK 46(20P13) MUTATED DEL PEAK 46(20P13) WILD-TYPE
  CLUS_1                         19                           73
  CLUS_2                         23                          102
  CLUS_3                         47                           68
  CLUS_4                         22                           77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(20P13) MUTATED       35     10     15
  DEL PEAK 46(20P13) WILD-TYPE     59     58     58
D78V5, multiclass
        clus
vv       DEL PEAK 46(20P13) MUTATED DEL PEAK 46(20P13) WILD-TYPE
  CLUS_1                         35                           59
  CLUS_2                         10                           58
  CLUS_3                         15                           58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(20P13) MUTATED       40     10     10
  DEL PEAK 46(20P13) WILD-TYPE     72     61     42
D78V6, multiclass
        clus
vv       DEL PEAK 46(20P13) MUTATED DEL PEAK 46(20P13) WILD-TYPE
  CLUS_1                         40                           72
  CLUS_2                         10                           61
  CLUS_3                         10                           42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 46(20P13) MUTATED       56     23     21     14     12
  DEL PEAK 46(20P13) WILD-TYPE     82     89     55     92     42
D78V7, multiclass
        clus
vv       DEL PEAK 46(20P13) MUTATED DEL PEAK 46(20P13) WILD-TYPE
  CLUS_1                         56                           82
  CLUS_2                         23                           89
  CLUS_3                         21                           55
  CLUS_4                         14                           92
  CLUS_5                         12                           42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 46(20P13) MUTATED       32     16     20     15      0     10     16
  DEL PEAK 46(20P13) WILD-TYPE     51     41     24     69     46     41     33
                              vv
clus                           CLUS_8 CLUS_9
  DEL PEAK 46(20P13) MUTATED        3     14
  DEL PEAK 46(20P13) WILD-TYPE     15     40
D78V8, multiclass
        clus
vv       DEL PEAK 46(20P13) MUTATED DEL PEAK 46(20P13) WILD-TYPE
  CLUS_1                         32                           51
  CLUS_2                         16                           41
  CLUS_3                         20                           24
  CLUS_4                         15                           69
  CLUS_5                          0                           46
  CLUS_6                         10                           41
  CLUS_7                         16                           33
  CLUS_8                          3                           15
  CLUS_9                         14                           40
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(20P13) MUTATED       46     58     19
  DEL PEAK 46(20P13) WILD-TYPE    133    173     59
D78V9, multiclass
        clus
vv       DEL PEAK 46(20P13) MUTATED DEL PEAK 46(20P13) WILD-TYPE
  CLUS_1                         46                          133
  CLUS_2                         58                          173
  CLUS_3                         19                           59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 46(20P13) MUTATED       16     13     33     37     16      8
  DEL PEAK 46(20P13) WILD-TYPE     55     31     85    100     67     27
D78V10, multiclass
        clus
vv       DEL PEAK 46(20P13) MUTATED DEL PEAK 46(20P13) WILD-TYPE
  CLUS_1                         16                           55
  CLUS_2                         13                           31
  CLUS_3                         33                           85
  CLUS_4                         37                          100
  CLUS_5                         16                           67
  CLUS_6                          8                           27
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(20P13) MUTATED       42     51     14
  DEL PEAK 46(20P13) WILD-TYPE    113    141     64
D78V11, multiclass
        clus
vv       DEL PEAK 46(20P13) MUTATED DEL PEAK 46(20P13) WILD-TYPE
  CLUS_1                         42                          113
  CLUS_2                         51                          141
  CLUS_3                         14                           64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(20P13) MUTATED       44     56      7
  DEL PEAK 46(20P13) WILD-TYPE    142    153     23
D78V12, multiclass
        clus
vv       DEL PEAK 46(20P13) MUTATED DEL PEAK 46(20P13) WILD-TYPE
  CLUS_1                         44                          142
  CLUS_2                         56                          153
  CLUS_3                          7                           23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(79) Variable = DEL PEAK 47(20Q13.12) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(20Q13.12) MUTATED        3      2      3      0
  DEL PEAK 47(20Q13.12) WILD-TYPE      2      7      9      6
D79V1, multiclass
        clus
vv       DEL PEAK 47(20Q13.12) MUTATED DEL PEAK 47(20Q13.12) WILD-TYPE
  CLUS_1                             3                               2
  CLUS_2                             2                               7
  CLUS_3                             3                               9
  CLUS_4                             0                               6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(20Q13.12) MUTATED        5      2      1
  DEL PEAK 47(20Q13.12) WILD-TYPE      9      9      6
D79V2, multiclass
        clus
vv       DEL PEAK 47(20Q13.12) MUTATED DEL PEAK 47(20Q13.12) WILD-TYPE
  CLUS_1                             5                               9
  CLUS_2                             2                               9
  CLUS_3                             1                               6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(20Q13.12) MUTATED       30     33     18
  DEL PEAK 47(20Q13.12) WILD-TYPE    156    183     73
D79V3, multiclass
        clus
vv       DEL PEAK 47(20Q13.12) MUTATED DEL PEAK 47(20Q13.12) WILD-TYPE
  CLUS_1                            30                             156
  CLUS_2                            33                             183
  CLUS_3                            18                              73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(20Q13.12) MUTATED       20     19     20      9
  DEL PEAK 47(20Q13.12) WILD-TYPE     72    106     95     90
D79V4, multiclass
        clus
vv       DEL PEAK 47(20Q13.12) MUTATED DEL PEAK 47(20Q13.12) WILD-TYPE
  CLUS_1                            20                              72
  CLUS_2                            19                             106
  CLUS_3                            20                              95
  CLUS_4                             9                              90
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(20Q13.12) MUTATED       21      7     11
  DEL PEAK 47(20Q13.12) WILD-TYPE     73     61     62
D79V5, multiclass
        clus
vv       DEL PEAK 47(20Q13.12) MUTATED DEL PEAK 47(20Q13.12) WILD-TYPE
  CLUS_1                            21                              73
  CLUS_2                             7                              61
  CLUS_3                            11                              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(20Q13.12) MUTATED       23      7      9
  DEL PEAK 47(20Q13.12) WILD-TYPE     89     64     43
D79V6, multiclass
        clus
vv       DEL PEAK 47(20Q13.12) MUTATED DEL PEAK 47(20Q13.12) WILD-TYPE
  CLUS_1                            23                              89
  CLUS_2                             7                              64
  CLUS_3                             9                              43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 47(20Q13.12) MUTATED       20     26     14     16      5
  DEL PEAK 47(20Q13.12) WILD-TYPE    118     86     62     90     49
D79V7, multiclass
        clus
vv       DEL PEAK 47(20Q13.12) MUTATED DEL PEAK 47(20Q13.12) WILD-TYPE
  CLUS_1                            20                             118
  CLUS_2                            26                              86
  CLUS_3                            14                              62
  CLUS_4                            16                              90
  CLUS_5                             5                              49
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 47(20Q13.12) MUTATED       15     12      7      5     12      9
  DEL PEAK 47(20Q13.12) WILD-TYPE     68     45     37     79     34     42
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 47(20Q13.12) MUTATED       12      1      8
  DEL PEAK 47(20Q13.12) WILD-TYPE     37     17     46
D79V8, multiclass
        clus
vv       DEL PEAK 47(20Q13.12) MUTATED DEL PEAK 47(20Q13.12) WILD-TYPE
  CLUS_1                            15                              68
  CLUS_2                            12                              45
  CLUS_3                             7                              37
  CLUS_4                             5                              79
  CLUS_5                            12                              34
  CLUS_6                             9                              42
  CLUS_7                            12                              37
  CLUS_8                             1                              17
  CLUS_9                             8                              46
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(20Q13.12) MUTATED       35     38      8
  DEL PEAK 47(20Q13.12) WILD-TYPE    144    193     70
D79V9, multiclass
        clus
vv       DEL PEAK 47(20Q13.12) MUTATED DEL PEAK 47(20Q13.12) WILD-TYPE
  CLUS_1                            35                             144
  CLUS_2                            38                             193
  CLUS_3                             8                              70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 47(20Q13.12) MUTATED       18     11     18     20     11      3
  DEL PEAK 47(20Q13.12) WILD-TYPE     53     33    100    117     72     32
D79V10, multiclass
        clus
vv       DEL PEAK 47(20Q13.12) MUTATED DEL PEAK 47(20Q13.12) WILD-TYPE
  CLUS_1                            18                              53
  CLUS_2                            11                              33
  CLUS_3                            18                             100
  CLUS_4                            20                             117
  CLUS_5                            11                              72
  CLUS_6                             3                              32
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(20Q13.12) MUTATED       33     26      7
  DEL PEAK 47(20Q13.12) WILD-TYPE    122    166     71
D79V11, multiclass
        clus
vv       DEL PEAK 47(20Q13.12) MUTATED DEL PEAK 47(20Q13.12) WILD-TYPE
  CLUS_1                            33                             122
  CLUS_2                            26                             166
  CLUS_3                             7                              71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(20Q13.12) MUTATED       34     30      2
  DEL PEAK 47(20Q13.12) WILD-TYPE    152    179     28
D79V12, multiclass
        clus
vv       DEL PEAK 47(20Q13.12) MUTATED DEL PEAK 47(20Q13.12) WILD-TYPE
  CLUS_1                            34                             152
  CLUS_2                            30                             179
  CLUS_3                             2                              28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(80) Variable = DEL PEAK 48(21Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(21Q11.2) MUTATED        1      2      1      4
  DEL PEAK 48(21Q11.2) WILD-TYPE      4      7     11      2
D80V1, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                            2                              7
  CLUS_3                            1                             11
  CLUS_4                            4                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q11.2) MUTATED        1      3      4
  DEL PEAK 48(21Q11.2) WILD-TYPE     13      8      3
D80V2, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                            1                             13
  CLUS_2                            3                              8
  CLUS_3                            4                              3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q11.2) MUTATED       54     60     53
  DEL PEAK 48(21Q11.2) WILD-TYPE    132    156     38
D80V3, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                           54                            132
  CLUS_2                           60                            156
  CLUS_3                           53                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(21Q11.2) MUTATED       14     52     39     35
  DEL PEAK 48(21Q11.2) WILD-TYPE     78     73     76     64
D80V4, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                           14                             78
  CLUS_2                           52                             73
  CLUS_3                           39                             76
  CLUS_4                           35                             64
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q11.2) MUTATED       30     21     35
  DEL PEAK 48(21Q11.2) WILD-TYPE     64     47     38
D80V5, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                           30                             64
  CLUS_2                           21                             47
  CLUS_3                           35                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q11.2) MUTATED       34     22     30
  DEL PEAK 48(21Q11.2) WILD-TYPE     78     49     22
D80V6, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                           34                             78
  CLUS_2                           22                             49
  CLUS_3                           30                             22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 48(21Q11.2) MUTATED       49     13     30     59     12
  DEL PEAK 48(21Q11.2) WILD-TYPE     89     99     46     47     42
D80V7, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                           49                             89
  CLUS_2                           13                             99
  CLUS_3                           30                             46
  CLUS_4                           59                             47
  CLUS_5                           12                             42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 48(21Q11.2) MUTATED       18      9     18     33     10     34
  DEL PEAK 48(21Q11.2) WILD-TYPE     65     48     26     51     36     17
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 48(21Q11.2) MUTATED       24      3     14
  DEL PEAK 48(21Q11.2) WILD-TYPE     25     15     40
D80V8, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                           18                             65
  CLUS_2                            9                             48
  CLUS_3                           18                             26
  CLUS_4                           33                             51
  CLUS_5                           10                             36
  CLUS_6                           34                             17
  CLUS_7                           24                             25
  CLUS_8                            3                             15
  CLUS_9                           14                             40
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q11.2) MUTATED       41    102     21
  DEL PEAK 48(21Q11.2) WILD-TYPE    138    129     57
D80V9, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                           41                            138
  CLUS_2                          102                            129
  CLUS_3                           21                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 48(21Q11.2) MUTATED       17     19     47     31     43      7
  DEL PEAK 48(21Q11.2) WILD-TYPE     54     25     71    106     40     28
D80V10, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                           17                             54
  CLUS_2                           19                             25
  CLUS_3                           47                             71
  CLUS_4                           31                            106
  CLUS_5                           43                             40
  CLUS_6                            7                             28
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q11.2) MUTATED       36     80     24
  DEL PEAK 48(21Q11.2) WILD-TYPE    119    112     54
D80V11, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                           36                            119
  CLUS_2                           80                            112
  CLUS_3                           24                             54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q11.2) MUTATED       49     87      4
  DEL PEAK 48(21Q11.2) WILD-TYPE    137    122     26
D80V12, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                           49                            137
  CLUS_2                           87                            122
  CLUS_3                            4                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(81) Variable = DEL PEAK 49(22Q13.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(22Q13.32) MUTATED        3      7      2      4
  DEL PEAK 49(22Q13.32) WILD-TYPE      2      2     10      2
D81V1, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                             3                               2
  CLUS_2                             7                               2
  CLUS_3                             2                              10
  CLUS_4                             4                               2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(22Q13.32) MUTATED        4      8      4
  DEL PEAK 49(22Q13.32) WILD-TYPE     10      3      3
D81V2, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                             4                              10
  CLUS_2                             8                               3
  CLUS_3                             4                               3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(22Q13.32) MUTATED      110     66     64
  DEL PEAK 49(22Q13.32) WILD-TYPE     76    150     27
D81V3, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                           110                              76
  CLUS_2                            66                             150
  CLUS_3                            64                              27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(22Q13.32) MUTATED       18     75     71     46
  DEL PEAK 49(22Q13.32) WILD-TYPE     74     50     44     53
D81V4, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                            18                              74
  CLUS_2                            75                              50
  CLUS_3                            71                              44
  CLUS_4                            46                              53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(22Q13.32) MUTATED       46     30     44
  DEL PEAK 49(22Q13.32) WILD-TYPE     48     38     29
D81V5, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                            46                              48
  CLUS_2                            30                              38
  CLUS_3                            44                              29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(22Q13.32) MUTATED       57     26     37
  DEL PEAK 49(22Q13.32) WILD-TYPE     55     45     15
D81V6, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                            57                              55
  CLUS_2                            26                              45
  CLUS_3                            37                              15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 49(22Q13.32) MUTATED       80     33     36     74     12
  DEL PEAK 49(22Q13.32) WILD-TYPE     58     79     40     32     42
D81V7, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                            80                              58
  CLUS_2                            33                              79
  CLUS_3                            36                              40
  CLUS_4                            74                              32
  CLUS_5                            12                              42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 49(22Q13.32) MUTATED       52     14     24     47     14     39
  DEL PEAK 49(22Q13.32) WILD-TYPE     31     43     20     37     32     12
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 49(22Q13.32) MUTATED       28      4     13
  DEL PEAK 49(22Q13.32) WILD-TYPE     21     14     41
D81V8, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                            52                              31
  CLUS_2                            14                              43
  CLUS_3                            24                              20
  CLUS_4                            47                              37
  CLUS_5                            14                              32
  CLUS_6                            39                              12
  CLUS_7                            28                              21
  CLUS_8                             4                              14
  CLUS_9                            13                              41
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(22Q13.32) MUTATED       62    138     37
  DEL PEAK 49(22Q13.32) WILD-TYPE    117     93     41
D81V9, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                            62                             117
  CLUS_2                           138                              93
  CLUS_3                            37                              41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 49(22Q13.32) MUTATED       26     26     71     49     53     12
  DEL PEAK 49(22Q13.32) WILD-TYPE     45     18     47     88     30     23
D81V10, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                            26                              45
  CLUS_2                            26                              18
  CLUS_3                            71                              47
  CLUS_4                            49                              88
  CLUS_5                            53                              30
  CLUS_6                            12                              23
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(22Q13.32) MUTATED       59    117     29
  DEL PEAK 49(22Q13.32) WILD-TYPE     96     75     49
D81V11, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                            59                              96
  CLUS_2                           117                              75
  CLUS_3                            29                              49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(22Q13.32) MUTATED       65    131      9
  DEL PEAK 49(22Q13.32) WILD-TYPE    121     78     21
D81V12, multiclass
        clus
vv       DEL PEAK 49(22Q13.32) MUTATED DEL PEAK 49(22Q13.32) WILD-TYPE
  CLUS_1                            65                             121
  CLUS_2                           131                              78
  CLUS_3                             9                              21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(82) Variable = DEL PEAK 50(XP22.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(XP22.2) MUTATED        2      2      4      3
  DEL PEAK 50(XP22.2) WILD-TYPE      3      7      8      3
D82V1, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                           2                             3
  CLUS_2                           2                             7
  CLUS_3                           4                             8
  CLUS_4                           3                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XP22.2) MUTATED        5      3      3
  DEL PEAK 50(XP22.2) WILD-TYPE      9      8      4
D82V2, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                           5                             9
  CLUS_2                           3                             8
  CLUS_3                           3                             4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XP22.2) MUTATED       79     34     22
  DEL PEAK 50(XP22.2) WILD-TYPE    107    182     69
D82V3, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          79                           107
  CLUS_2                          34                           182
  CLUS_3                          22                            69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(XP22.2) MUTATED       19     31     45     21
  DEL PEAK 50(XP22.2) WILD-TYPE     73     94     70     78
D82V4, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          19                            73
  CLUS_2                          31                            94
  CLUS_3                          45                            70
  CLUS_4                          21                            78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XP22.2) MUTATED       31     10     24
  DEL PEAK 50(XP22.2) WILD-TYPE     63     58     49
D82V5, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          31                            63
  CLUS_2                          10                            58
  CLUS_3                          24                            49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XP22.2) MUTATED       38     12     15
  DEL PEAK 50(XP22.2) WILD-TYPE     74     59     37
D82V6, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          38                            74
  CLUS_2                          12                            59
  CLUS_3                          15                            37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 50(XP22.2) MUTATED       58     28     13     25     10
  DEL PEAK 50(XP22.2) WILD-TYPE     80     84     63     81     44
D82V7, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          58                            80
  CLUS_2                          28                            84
  CLUS_3                          13                            63
  CLUS_4                          25                            81
  CLUS_5                          10                            44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 50(XP22.2) MUTATED       36     16     17     27      8      8
  DEL PEAK 50(XP22.2) WILD-TYPE     47     41     27     57     38     43
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 50(XP22.2) MUTATED        8      1     13
  DEL PEAK 50(XP22.2) WILD-TYPE     41     17     41
D82V8, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          36                            47
  CLUS_2                          16                            41
  CLUS_3                          17                            27
  CLUS_4                          27                            57
  CLUS_5                           8                            38
  CLUS_6                           8                            43
  CLUS_7                           8                            41
  CLUS_8                           1                            17
  CLUS_9                          13                            41
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XP22.2) MUTATED       42     66     25
  DEL PEAK 50(XP22.2) WILD-TYPE    137    165     53
D82V9, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          42                           137
  CLUS_2                          66                           165
  CLUS_3                          25                            53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 50(XP22.2) MUTATED       16      9     36     38     26      8
  DEL PEAK 50(XP22.2) WILD-TYPE     55     35     82     99     57     27
D82V10, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          16                            55
  CLUS_2                           9                            35
  CLUS_3                          36                            82
  CLUS_4                          38                            99
  CLUS_5                          26                            57
  CLUS_6                           8                            27
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XP22.2) MUTATED       39     56     21
  DEL PEAK 50(XP22.2) WILD-TYPE    116    136     57
D82V11, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          39                           116
  CLUS_2                          56                           136
  CLUS_3                          21                            57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XP22.2) MUTATED       47     60      9
  DEL PEAK 50(XP22.2) WILD-TYPE    139    149     21
D82V12, multiclass
        clus
vv       DEL PEAK 50(XP22.2) MUTATED DEL PEAK 50(XP22.2) WILD-TYPE
  CLUS_1                          47                           139
  CLUS_2                          60                           149
  CLUS_3                           9                            21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
