[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"         "-nVNozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"        "-oTLUSC-TP"
[1] "opt"       "-OPMUTSIG"
[1] "tl" ""  
[1] "dx" ""  
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/LUSC-TP/10668108/LUSC-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/LUSC-TP/10013787/transformed.cor.cli.txt"

nPatients in clinical file=493, in cluster file=490, common to both=490
[1]  80 490
[1] "AMP PEAK  1(1Q21.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE 
                          253                           237 
  AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE 
                          253                           237 
[1] "AMP PEAK  2(2P16.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE 
                          271                           219 
  AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE 
                          271                           219 
[1] "AMP PEAK  3(2Q31.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE 
                          168                           322 
  AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE 
                          168                           322 
[1] "AMP PEAK  4(3P11.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE 
                           96                           394 
  AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE 
                           96                           394 
[1] "AMP PEAK  5(3Q26.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE 
                           442                             48 
  AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE 
                           442                             48 
[1] "AMP PEAK  6(4Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE 
                        114                         376 
  AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE 
                        114                         376 
[1] "AMP PEAK  7(5P15.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE 
                           378                            112 
  AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE 
                           378                            112 
[1] "AMP PEAK  8(5P12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE 
                        346                         144 
  AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE 
                        346                         144 
[1] "AMP PEAK  9(6P12.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE 
                          162                           328 
  AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE 
                          162                           328 
[1] "AMP PEAK 10(6Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE 
                        147                         343 
  AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE 
                        147                         343 
[1] "AMP PEAK 11(7P11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE 
                          249                           241 
  AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE 
                          249                           241 
[1] "AMP PEAK 12(7Q21.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE 
                          258                           232 
  AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE 
                          258                           232 
[1] "AMP PEAK 13(8P11.23) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE 
                           232                            258 
  AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE 
                           232                            258 
[1] "AMP PEAK 14(8Q24.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE 
                           342                            148 
  AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE 
                           342                            148 
[1] "AMP PEAK 15(9P13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE 
                          134                           356 
  AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE 
                          134                           356 
[1] "AMP PEAK 16(11Q13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE 
                           181                            309 
  AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE 
                           181                            309 
[1] "AMP PEAK 17(12P13.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE 
                            249                             241 
  AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE 
                            249                             241 
[1] "AMP PEAK 18(12Q15) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE 
                         178                          312 
  AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE 
                         178                          312 
[1] "AMP PEAK 19(13Q34) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE 
                          88                          402 
  AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE 
                          88                          402 
[1] "AMP PEAK 20(14Q13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE 
                           154                            336 
  AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE 
                           154                            336 
[1] "AMP PEAK 21(15Q26.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE 
                           176                            314 
  AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE 
                           176                            314 
[1] "AMP PEAK 22(17Q25.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE 
                           233                            257 
  AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE 
                           233                            257 
[1] "AMP PEAK 23(18P11.32) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE 
                            175                             315 
  AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE 
                            175                             315 
[1] "AMP PEAK 24(18Q11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE 
                           148                            342 
  AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE 
                           148                            342 
[1] "AMP PEAK 25(19Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE 
                         218                          272 
  AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE 
                         218                          272 
[1] "AMP PEAK 26(19Q13.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE 
                           229                            261 
  AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE 
                           229                            261 
[1] "AMP PEAK 27(20P12.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE 
                           273                            217 
  AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE 
                           273                            217 
[1] "AMP PEAK 28(20Q11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE 
                            298                             192 
  AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE 
                            298                             192 
[1] "AMP PEAK 29(22Q11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE 
                            253                             237 
  AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE 
                            253                             237 
[1] "AMP PEAK 30(XQ28) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE 
                        122                         368 
  AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE 
                        122                         368 
[1] "DEL PEAK  1(1P36.32) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE 
                           213                            277 
  DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE 
                           213                            277 
[1] "DEL PEAK  2(1P13.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE 
                          212                           278 
  DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE 
                          212                           278 
[1] "DEL PEAK  3(2P25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE 
                           50                           440 
  DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE 
                           50                           440 
[1] "DEL PEAK  4(2Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE 
                          124                           366 
  DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE 
                          124                           366 
[1] "DEL PEAK  5(2Q37.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE 
                          155                           335 
  DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE 
                          155                           335 
[1] "DEL PEAK  6(3P25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE 
                          389                           101 
  DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE 
                          389                           101 
[1] "DEL PEAK  7(3P13) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE 
                        424                          66 
  DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE 
                        424                          66 
[1] "DEL PEAK  8(3P12.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE 
                          413                            77 
  DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE 
                          413                            77 
[1] "DEL PEAK  9(3Q11.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE 
                           77                           413 
  DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE 
                           77                           413 
[1] "DEL PEAK 10(4P15.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE 
                          307                           183 
  DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE 
                          307                           183 
[1] "DEL PEAK 11(4Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE 
                          278                           212 
  DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE 
                          278                           212 
[1] "DEL PEAK 12(4Q32.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE 
                          322                           168 
  DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE 
                          322                           168 
[1] "DEL PEAK 13(4Q35.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE 
                          323                           167 
  DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE 
                          323                           167 
[1] "DEL PEAK 14(5Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE 
                          360                           130 
  DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE 
                          360                           130 
[1] "DEL PEAK 15(6P25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE 
                          128                           362 
  DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE 
                          128                           362 
[1] "DEL PEAK 16(6Q22.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE 
                           118                            372 
  DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE 
                           118                            372 
[1] "DEL PEAK 17(6Q26) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE 
                        130                         360 
  DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE 
                        130                         360 
[1] "DEL PEAK 18(7Q11.22) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE 
                            47                            443 
  DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE 
                            47                            443 
[1] "DEL PEAK 19(7Q36.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE 
                          103                           387 
  DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE 
                          103                           387 
[1] "DEL PEAK 20(8P23.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE 
                          335                           155 
  DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE 
                          335                           155 
[1] "DEL PEAK 21(9P23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE 
                        323                         167 
  DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE 
                        323                         167 
[1] "DEL PEAK 22(9P21.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE 
                          378                           112 
  DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE 
                          378                           112 
[1] "DEL PEAK 23(9Q21.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE 
                           248                            242 
  DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE 
                           248                            242 
[1] "DEL PEAK 24(10P15.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE 
                           222                            268 
  DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE 
                           222                            268 
[1] "DEL PEAK 25(10P15.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE 
                           210                            280 
  DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE 
                           210                            280 
[1] "DEL PEAK 26(10Q23.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE 
                            259                             231 
  DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE 
                            259                             231 
[1] "DEL PEAK 27(11P15.5) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE 
                           239                            251 
  DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE 
                           239                            251 
[1] "DEL PEAK 28(11Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE 
                           158                            332 
  DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE 
                           158                            332 
[1] "DEL PEAK 29(11Q25) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE 
                         182                          308 
  DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE 
                         182                          308 
[1] "DEL PEAK 30(12Q24.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE 
                             85                             405 
  DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE 
                             85                             405 
[1] "DEL PEAK 31(13Q12.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE 
                            326                             164 
  DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE 
                            326                             164 
[1] "DEL PEAK 32(13Q14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE 
                           337                            153 
  DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE 
                           337                            153 
[1] "DEL PEAK 33(14Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE 
                           171                            319 
  DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE 
                           171                            319 
[1] "DEL PEAK 34(15Q12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE 
                         169                          321 
  DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE 
                         169                          321 
[1] "DEL PEAK 35(15Q21.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE 
                           162                            328 
  DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE 
                           162                            328 
[1] "DEL PEAK 36(16P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE 
                           181                            309 
  DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE 
                           181                            309 
[1] "DEL PEAK 37(16Q23.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE 
                           204                            286 
  DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE 
                           204                            286 
[1] "DEL PEAK 38(17Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE 
                           128                            362 
  DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE 
                           128                            362 
[1] "DEL PEAK 39(17Q25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE 
                           100                            390 
  DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE 
                           100                            390 
[1] "DEL PEAK 40(18Q23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE 
                         227                          263 
  DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE 
                         227                          263 
[1] "DEL PEAK 41(19P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE 
                           229                            261 
  DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE 
                           229                            261 
[1] "DEL PEAK 42(19Q13.32) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE 
                            143                             347 
  DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE 
                            143                             347 
[1] "DEL PEAK 43(21Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE 
                           241                            249 
  DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE 
                           241                            249 
[1] "DEL PEAK 44(21Q22.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE 
                           276                            214 
  DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE 
                           276                            214 
[1] "DEL PEAK 45(22Q11.21) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE 
                             92                             398 
  DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE 
                             92                             398 
[1] "DEL PEAK 46(22Q13.32) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE 
                            125                             365 
  DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE 
                            125                             365 
[1] "DEL PEAK 47(XP22.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE 
                          151                           339 
  DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE 
                          151                           339 
[1] "DEL PEAK 48(XP21.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE 
                          149                           341 
  DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE 
                          149                           341 
[1] "DEL PEAK 49(XP11.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE 
                          145                           345 
  DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE 
                          145                           345 
[1] "DEL PEAK 50(XQ22.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE 
                          110                           380 
  DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE 
                          110                           380 
[1] "terrence_modification_tag"
[1] TRUE
[1] "data2feature, selection=ALL"
 [1] "MRNA_CNMF"                   "MRNA_CHIERARCHICAL"         
 [3] "CN_CNMF"                     "METHLYATION_CNMF"           
 [5] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [7] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [9] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[11] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 12 rows and 490 columns.

Variable 1:'MRNA_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'MRNA_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'RPPA_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'RPPA_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MRNASEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MIRSEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 11:'MIRSEQ_MATURE_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 12:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=9,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
 [1] "MRNA_CNMF"                   "MRNA_CHIERARCHICAL"         
 [3] "CN_CNMF"                     "METHLYATION_CNMF"           
 [5] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [7] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [9] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[11] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 490 columns, 0 survival variables, and 12 non-survival variables.
MRNA_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNA_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=9, binary=FALSE, numeric=FALSE

Clustering(1) Variable = AMP PEAK  1(1Q21.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1Q21.2) MUTATED       18     37     16     16
  AMP PEAK  1(1Q21.2) WILD-TYPE     24     15     16     12
D1V1, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          18                            24
  CLUS_2                          37                            15
  CLUS_3                          16                            16
  CLUS_4                          16                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q21.2) MUTATED       23     38     26
  AMP PEAK  1(1Q21.2) WILD-TYPE     24     18     25
D1V2, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          23                            24
  CLUS_2                          38                            18
  CLUS_3                          26                            25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q21.2) MUTATED       79    120     54
  AMP PEAK  1(1Q21.2) WILD-TYPE    114     42     81
D1V3, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          79                           114
  CLUS_2                         120                            42
  CLUS_3                          54                            81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q21.2) MUTATED       50     78     51
  AMP PEAK  1(1Q21.2) WILD-TYPE     92     36     49
D1V4, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          50                            92
  CLUS_2                          78                            36
  CLUS_3                          51                            49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q21.2) MUTATED       37     36     28
  AMP PEAK  1(1Q21.2) WILD-TYPE     23     37     33
D1V5, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          37                            23
  CLUS_2                          36                            37
  CLUS_3                          28                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1Q21.2) MUTATED       36     19     26     20
  AMP PEAK  1(1Q21.2) WILD-TYPE     18     22     26     27
D1V6, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          36                            18
  CLUS_2                          19                            22
  CLUS_3                          26                            26
  CLUS_4                          20                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1Q21.2) MUTATED       42    102     80     28
  AMP PEAK  1(1Q21.2) WILD-TYPE     68     43     73     50
D1V7, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          42                            68
  CLUS_2                         102                            43
  CLUS_3                          80                            73
  CLUS_4                          28                            50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q21.2) MUTATED       71    106     75
  AMP PEAK  1(1Q21.2) WILD-TYPE    131     43     60
D1V8, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          71                           131
  CLUS_2                         106                            43
  CLUS_3                          75                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1Q21.2) MUTATED       78     70     48     43
  AMP PEAK  1(1Q21.2) WILD-TYPE     67     60     77     21
D1V9, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          78                            67
  CLUS_2                          70                            60
  CLUS_3                          48                            77
  CLUS_4                          43                            21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q21.2) MUTATED       56     92     91
  AMP PEAK  1(1Q21.2) WILD-TYPE     18    101    106
D1V10, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          56                            18
  CLUS_2                          92                           101
  CLUS_3                          91                           106
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q21.2) MUTATED       75     49     39
  AMP PEAK  1(1Q21.2) WILD-TYPE     50     63     52
D1V11, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          75                            50
  CLUS_2                          49                            63
  CLUS_3                          39                            52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  1(1Q21.2) MUTATED       34     13      7     10     25     20
  AMP PEAK  1(1Q21.2) WILD-TYPE     19     21     21     16     13     39
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  AMP PEAK  1(1Q21.2) MUTATED       25     11     18
  AMP PEAK  1(1Q21.2) WILD-TYPE      6     10     20
D1V12, multiclass
        clus
vv       AMP PEAK  1(1Q21.2) MUTATED AMP PEAK  1(1Q21.2) WILD-TYPE
  CLUS_1                          34                            19
  CLUS_2                          13                            21
  CLUS_3                           7                            21
  CLUS_4                          10                            16
  CLUS_5                          25                            13
  CLUS_6                          20                            39
  CLUS_7                          25                             6
  CLUS_8                          11                            10
  CLUS_9                          18                            20
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(2) Variable = AMP PEAK  2(2P16.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(2P16.1) MUTATED       19     40     13     13
  AMP PEAK  2(2P16.1) WILD-TYPE     23     12     19     15
D2V1, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          19                            23
  CLUS_2                          40                            12
  CLUS_3                          13                            19
  CLUS_4                          13                            15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P16.1) MUTATED       24     42     19
  AMP PEAK  2(2P16.1) WILD-TYPE     23     14     32
D2V2, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          24                            23
  CLUS_2                          42                            14
  CLUS_3                          19                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P16.1) MUTATED       70    127     74
  AMP PEAK  2(2P16.1) WILD-TYPE    123     35     61
D2V3, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          70                           123
  CLUS_2                         127                            35
  CLUS_3                          74                            61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P16.1) MUTATED       61     85     54
  AMP PEAK  2(2P16.1) WILD-TYPE     81     29     46
D2V4, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          61                            81
  CLUS_2                          85                            29
  CLUS_3                          54                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P16.1) MUTATED       33     38     33
  AMP PEAK  2(2P16.1) WILD-TYPE     27     35     28
D2V5, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          33                            27
  CLUS_2                          38                            35
  CLUS_3                          33                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(2P16.1) MUTATED       28     19     30     27
  AMP PEAK  2(2P16.1) WILD-TYPE     26     22     22     20
D2V6, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          28                            26
  CLUS_2                          19                            22
  CLUS_3                          30                            22
  CLUS_4                          27                            20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(2P16.1) MUTATED       44    109     91     25
  AMP PEAK  2(2P16.1) WILD-TYPE     66     36     62     53
D2V7, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          44                            66
  CLUS_2                         109                            36
  CLUS_3                          91                            62
  CLUS_4                          25                            53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P16.1) MUTATED       96    108     65
  AMP PEAK  2(2P16.1) WILD-TYPE    106     41     70
D2V8, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          96                           106
  CLUS_2                         108                            41
  CLUS_3                          65                            70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(2P16.1) MUTATED       81     90     49     39
  AMP PEAK  2(2P16.1) WILD-TYPE     64     40     76     25
D2V9, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          81                            64
  CLUS_2                          90                            40
  CLUS_3                          49                            76
  CLUS_4                          39                            25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P16.1) MUTATED       48     89    122
  AMP PEAK  2(2P16.1) WILD-TYPE     26    104     75
D2V10, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          48                            26
  CLUS_2                          89                           104
  CLUS_3                         122                            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P16.1) MUTATED       84     58     40
  AMP PEAK  2(2P16.1) WILD-TYPE     41     54     51
D2V11, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          84                            41
  CLUS_2                          58                            54
  CLUS_3                          40                            51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  2(2P16.1) MUTATED       30     19      7     12     20     31
  AMP PEAK  2(2P16.1) WILD-TYPE     23     15     21     14     18     28
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  AMP PEAK  2(2P16.1) MUTATED       23     11     29
  AMP PEAK  2(2P16.1) WILD-TYPE      8     10      9
D2V12, multiclass
        clus
vv       AMP PEAK  2(2P16.1) MUTATED AMP PEAK  2(2P16.1) WILD-TYPE
  CLUS_1                          30                            23
  CLUS_2                          19                            15
  CLUS_3                           7                            21
  CLUS_4                          12                            14
  CLUS_5                          20                            18
  CLUS_6                          31                            28
  CLUS_7                          23                             8
  CLUS_8                          11                            10
  CLUS_9                          29                             9
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(3) Variable = AMP PEAK  3(2Q31.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(2Q31.2) MUTATED       10     27      8     10
  AMP PEAK  3(2Q31.2) WILD-TYPE     32     25     24     18
D3V1, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          10                            32
  CLUS_2                          27                            25
  CLUS_3                           8                            24
  CLUS_4                          10                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q31.2) MUTATED       13     28     14
  AMP PEAK  3(2Q31.2) WILD-TYPE     34     28     37
D3V2, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          13                            34
  CLUS_2                          28                            28
  CLUS_3                          14                            37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q31.2) MUTATED       42     80     46
  AMP PEAK  3(2Q31.2) WILD-TYPE    151     82     89
D3V3, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          42                           151
  CLUS_2                          80                            82
  CLUS_3                          46                            89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q31.2) MUTATED       36     62     29
  AMP PEAK  3(2Q31.2) WILD-TYPE    106     52     71
D3V4, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          36                           106
  CLUS_2                          62                            52
  CLUS_3                          29                            71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q31.2) MUTATED       22     22     21
  AMP PEAK  3(2Q31.2) WILD-TYPE     38     51     40
D3V5, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          22                            38
  CLUS_2                          22                            51
  CLUS_3                          21                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(2Q31.2) MUTATED       16     12     18     19
  AMP PEAK  3(2Q31.2) WILD-TYPE     38     29     34     28
D3V6, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          16                            38
  CLUS_2                          12                            29
  CLUS_3                          18                            34
  CLUS_4                          19                            28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(2Q31.2) MUTATED       27     75     48     17
  AMP PEAK  3(2Q31.2) WILD-TYPE     83     70    105     61
D3V7, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          27                            83
  CLUS_2                          75                            70
  CLUS_3                          48                           105
  CLUS_4                          17                            61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q31.2) MUTATED       54     71     42
  AMP PEAK  3(2Q31.2) WILD-TYPE    148     78     93
D3V8, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          54                           148
  CLUS_2                          71                            78
  CLUS_3                          42                            93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(2Q31.2) MUTATED       54     53     29     24
  AMP PEAK  3(2Q31.2) WILD-TYPE     91     77     96     40
D3V9, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          54                            91
  CLUS_2                          53                            77
  CLUS_3                          29                            96
  CLUS_4                          24                            40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q31.2) MUTATED       30     61     69
  AMP PEAK  3(2Q31.2) WILD-TYPE     44    132    128
D3V10, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          30                            44
  CLUS_2                          61                           132
  CLUS_3                          69                           128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q31.2) MUTATED       59     28     22
  AMP PEAK  3(2Q31.2) WILD-TYPE     66     84     69
D3V11, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          59                            66
  CLUS_2                          28                            84
  CLUS_3                          22                            69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  3(2Q31.2) MUTATED       21      8      6      7      9     16
  AMP PEAK  3(2Q31.2) WILD-TYPE     32     26     22     19     29     43
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  AMP PEAK  3(2Q31.2) MUTATED       15      6     21
  AMP PEAK  3(2Q31.2) WILD-TYPE     16     15     17
D3V12, multiclass
        clus
vv       AMP PEAK  3(2Q31.2) MUTATED AMP PEAK  3(2Q31.2) WILD-TYPE
  CLUS_1                          21                            32
  CLUS_2                           8                            26
  CLUS_3                           6                            22
  CLUS_4                           7                            19
  CLUS_5                           9                            29
  CLUS_6                          16                            43
  CLUS_7                          15                            16
  CLUS_8                           6                            15
  CLUS_9                          21                            17
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(4) Variable = AMP PEAK  4(3P11.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3P11.1) MUTATED       14     11      3      6
  AMP PEAK  4(3P11.1) WILD-TYPE     28     41     29     22
D4V1, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                          14                            28
  CLUS_2                          11                            41
  CLUS_3                           3                            29
  CLUS_4                           6                            22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3P11.1) MUTATED       14     12      8
  AMP PEAK  4(3P11.1) WILD-TYPE     33     44     43
D4V2, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                          14                            33
  CLUS_2                          12                            44
  CLUS_3                           8                            43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3P11.1) MUTATED       34     32     30
  AMP PEAK  4(3P11.1) WILD-TYPE    159    130    105
D4V3, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                          34                           159
  CLUS_2                          32                           130
  CLUS_3                          30                           105
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3P11.1) MUTATED       26     23     17
  AMP PEAK  4(3P11.1) WILD-TYPE    116     91     83
D4V4, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                          26                           116
  CLUS_2                          23                            91
  CLUS_3                          17                            83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3P11.1) MUTATED        9     18     10
  AMP PEAK  4(3P11.1) WILD-TYPE     51     55     51
D4V5, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                           9                            51
  CLUS_2                          18                            55
  CLUS_3                          10                            51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3P11.1) MUTATED        4      3     18     12
  AMP PEAK  4(3P11.1) WILD-TYPE     50     38     34     35
D4V6, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                           4                            50
  CLUS_2                           3                            38
  CLUS_3                          18                            34
  CLUS_4                          12                            35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3P11.1) MUTATED       25     29     33      9
  AMP PEAK  4(3P11.1) WILD-TYPE     85    116    120     69
D4V7, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                          25                            85
  CLUS_2                          29                           116
  CLUS_3                          33                           120
  CLUS_4                           9                            69
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3P11.1) MUTATED       40     33     23
  AMP PEAK  4(3P11.1) WILD-TYPE    162    116    112
D4V8, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                          40                           162
  CLUS_2                          33                           116
  CLUS_3                          23                           112
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3P11.1) MUTATED       33     30     17     10
  AMP PEAK  4(3P11.1) WILD-TYPE    112    100    108     54
D4V9, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                          33                           112
  CLUS_2                          30                           100
  CLUS_3                          17                           108
  CLUS_4                          10                            54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3P11.1) MUTATED       14     35     41
  AMP PEAK  4(3P11.1) WILD-TYPE     60    158    156
D4V10, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                          14                            60
  CLUS_2                          35                           158
  CLUS_3                          41                           156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3P11.1) MUTATED       22     23     15
  AMP PEAK  4(3P11.1) WILD-TYPE    103     89     76
D4V11, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                          22                           103
  CLUS_2                          23                            89
  CLUS_3                          15                            76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  4(3P11.1) MUTATED       11      8      0      3      8     14
  AMP PEAK  4(3P11.1) WILD-TYPE     42     26     28     23     30     45
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  AMP PEAK  4(3P11.1) MUTATED        6      5      5
  AMP PEAK  4(3P11.1) WILD-TYPE     25     16     33
D4V12, multiclass
        clus
vv       AMP PEAK  4(3P11.1) MUTATED AMP PEAK  4(3P11.1) WILD-TYPE
  CLUS_1                          11                            42
  CLUS_2                           8                            26
  CLUS_3                           0                            28
  CLUS_4                           3                            23
  CLUS_5                           8                            30
  CLUS_6                          14                            45
  CLUS_7                           6                            25
  CLUS_8                           5                            16
  CLUS_9                           5                            33
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(5) Variable = AMP PEAK  5(3Q26.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(3Q26.33) MUTATED       40     52     25     23
  AMP PEAK  5(3Q26.33) WILD-TYPE      2      0      7      5
D5V1, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                           40                              2
  CLUS_2                           52                              0
  CLUS_3                           25                              7
  CLUS_4                           23                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3Q26.33) MUTATED       43     56     41
  AMP PEAK  5(3Q26.33) WILD-TYPE      4      0     10
D5V2, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                           43                              4
  CLUS_2                           56                              0
  CLUS_3                           41                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3Q26.33) MUTATED      150    162    130
  AMP PEAK  5(3Q26.33) WILD-TYPE     43      0      5
D5V3, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                          150                             43
  CLUS_2                          162                              0
  CLUS_3                          130                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3Q26.33) MUTATED      112    114     94
  AMP PEAK  5(3Q26.33) WILD-TYPE     30      0      6
D5V4, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                          112                             30
  CLUS_2                          114                              0
  CLUS_3                           94                              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3Q26.33) MUTATED       55     67     51
  AMP PEAK  5(3Q26.33) WILD-TYPE      5      6     10
D5V5, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                           55                              5
  CLUS_2                           67                              6
  CLUS_3                           51                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(3Q26.33) MUTATED       47     32     50     44
  AMP PEAK  5(3Q26.33) WILD-TYPE      7      9      2      3
D5V6, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                           47                              7
  CLUS_2                           32                              9
  CLUS_3                           50                              2
  CLUS_4                           44                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(3Q26.33) MUTATED      104    145    132     58
  AMP PEAK  5(3Q26.33) WILD-TYPE      6      0     21     20
D5V7, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                          104                              6
  CLUS_2                          145                              0
  CLUS_3                          132                             21
  CLUS_4                           58                             20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3Q26.33) MUTATED      189    148    102
  AMP PEAK  5(3Q26.33) WILD-TYPE     13      1     33
D5V8, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                          189                             13
  CLUS_2                          148                              1
  CLUS_3                          102                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(3Q26.33) MUTATED      131    128     97     63
  AMP PEAK  5(3Q26.33) WILD-TYPE     14      2     28      1
D5V9, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                          131                             14
  CLUS_2                          128                              2
  CLUS_3                           97                             28
  CLUS_4                           63                              1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3Q26.33) MUTATED       74    157    188
  AMP PEAK  5(3Q26.33) WILD-TYPE      0     36      9
D5V10, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                           74                              0
  CLUS_2                          157                             36
  CLUS_3                          188                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3Q26.33) MUTATED      120    100     75
  AMP PEAK  5(3Q26.33) WILD-TYPE      5     12     16
D5V11, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                          120                              5
  CLUS_2                          100                             12
  CLUS_3                           75                             16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  5(3Q26.33) MUTATED       51     32     16     17     35     54
  AMP PEAK  5(3Q26.33) WILD-TYPE      2      2     12      9      3      5
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK  5(3Q26.33) MUTATED       31     21     38
  AMP PEAK  5(3Q26.33) WILD-TYPE      0      0      0
D5V12, multiclass
        clus
vv       AMP PEAK  5(3Q26.33) MUTATED AMP PEAK  5(3Q26.33) WILD-TYPE
  CLUS_1                           51                              2
  CLUS_2                           32                              2
  CLUS_3                           16                             12
  CLUS_4                           17                              9
  CLUS_5                           35                              3
  CLUS_6                           54                              5
  CLUS_7                           31                              0
  CLUS_8                           21                              0
  CLUS_9                           38                              0
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(6) Variable = AMP PEAK  6(4Q12) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(4Q12) MUTATED       12     17      8      9
  AMP PEAK  6(4Q12) WILD-TYPE     30     35     24     19
D6V1, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        12                          30
  CLUS_2                        17                          35
  CLUS_3                         8                          24
  CLUS_4                         9                          19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(4Q12) MUTATED       15     17     14
  AMP PEAK  6(4Q12) WILD-TYPE     32     39     37
D6V2, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        15                          32
  CLUS_2                        17                          39
  CLUS_3                        14                          37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(4Q12) MUTATED       28     41     45
  AMP PEAK  6(4Q12) WILD-TYPE    165    121     90
D6V3, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        28                         165
  CLUS_2                        41                         121
  CLUS_3                        45                          90
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(4Q12) MUTATED       21     29     24
  AMP PEAK  6(4Q12) WILD-TYPE    121     85     76
D6V4, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        21                         121
  CLUS_2                        29                          85
  CLUS_3                        24                          76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(4Q12) MUTATED       13     19      9
  AMP PEAK  6(4Q12) WILD-TYPE     47     54     52
D6V5, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        13                          47
  CLUS_2                        19                          54
  CLUS_3                         9                          52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(4Q12) MUTATED        9      6     17      9
  AMP PEAK  6(4Q12) WILD-TYPE     45     35     35     38
D6V6, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                         9                          45
  CLUS_2                         6                          35
  CLUS_3                        17                          35
  CLUS_4                         9                          38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(4Q12) MUTATED       25     35     42     10
  AMP PEAK  6(4Q12) WILD-TYPE     85    110    111     68
D6V7, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        25                          85
  CLUS_2                        35                         110
  CLUS_3                        42                         111
  CLUS_4                        10                          68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(4Q12) MUTATED       44     37     31
  AMP PEAK  6(4Q12) WILD-TYPE    158    112    104
D6V8, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        44                         158
  CLUS_2                        37                         112
  CLUS_3                        31                         104
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(4Q12) MUTATED       40     39     20      7
  AMP PEAK  6(4Q12) WILD-TYPE    105     91    105     57
D6V9, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        40                         105
  CLUS_2                        39                          91
  CLUS_3                        20                         105
  CLUS_4                         7                          57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(4Q12) MUTATED       13     41     52
  AMP PEAK  6(4Q12) WILD-TYPE     61    152    145
D6V10, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        13                          61
  CLUS_2                        41                         152
  CLUS_3                        52                         145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(4Q12) MUTATED       32     24     11
  AMP PEAK  6(4Q12) WILD-TYPE     93     88     80
D6V11, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        32                          93
  CLUS_2                        24                          88
  CLUS_3                        11                          80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK  6(4Q12) MUTATED       10     13      4      6      9     10      5
  AMP PEAK  6(4Q12) WILD-TYPE     43     21     24     20     29     49     26
                             vv
clus                          CLUS_8 CLUS_9
  AMP PEAK  6(4Q12) MUTATED        4      6
  AMP PEAK  6(4Q12) WILD-TYPE     17     32
D6V12, multiclass
        clus
vv       AMP PEAK  6(4Q12) MUTATED AMP PEAK  6(4Q12) WILD-TYPE
  CLUS_1                        10                          43
  CLUS_2                        13                          21
  CLUS_3                         4                          24
  CLUS_4                         6                          20
  CLUS_5                         9                          29
  CLUS_6                        10                          49
  CLUS_7                         5                          26
  CLUS_8                         4                          17
  CLUS_9                         6                          32
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(7) Variable = AMP PEAK  7(5P15.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P15.33) MUTATED       35     41     25     21
  AMP PEAK  7(5P15.33) WILD-TYPE      7     11      7      7
D7V1, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           35                              7
  CLUS_2                           41                             11
  CLUS_3                           25                              7
  CLUS_4                           21                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P15.33) MUTATED       36     44     42
  AMP PEAK  7(5P15.33) WILD-TYPE     11     12      9
D7V2, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           36                             11
  CLUS_2                           44                             12
  CLUS_3                           42                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P15.33) MUTATED      134    115    129
  AMP PEAK  7(5P15.33) WILD-TYPE     59     47      6
D7V3, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                          134                             59
  CLUS_2                          115                             47
  CLUS_3                          129                              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P15.33) MUTATED      105     83     86
  AMP PEAK  7(5P15.33) WILD-TYPE     37     31     14
D7V4, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                          105                             37
  CLUS_2                           83                             31
  CLUS_3                           86                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P15.33) MUTATED       44     57     51
  AMP PEAK  7(5P15.33) WILD-TYPE     16     16     10
D7V5, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           44                             16
  CLUS_2                           57                             16
  CLUS_3                           51                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P15.33) MUTATED       44     28     41     39
  AMP PEAK  7(5P15.33) WILD-TYPE     10     13     11      8
D7V6, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           44                             10
  CLUS_2                           28                             13
  CLUS_3                           41                             11
  CLUS_4                           39                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P15.33) MUTATED       84    108    124     59
  AMP PEAK  7(5P15.33) WILD-TYPE     26     37     29     19
D7V7, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           84                             26
  CLUS_2                          108                             37
  CLUS_3                          124                             29
  CLUS_4                           59                             19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P15.33) MUTATED      159    108    108
  AMP PEAK  7(5P15.33) WILD-TYPE     43     41     27
D7V8, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                          159                             43
  CLUS_2                          108                             41
  CLUS_3                          108                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P15.33) MUTATED      115    102     95     46
  AMP PEAK  7(5P15.33) WILD-TYPE     30     28     30     18
D7V9, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                          115                             30
  CLUS_2                          102                             28
  CLUS_3                           95                             30
  CLUS_4                           46                             18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P15.33) MUTATED       55    135    168
  AMP PEAK  7(5P15.33) WILD-TYPE     19     58     29
D7V10, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           55                             19
  CLUS_2                          135                             58
  CLUS_3                          168                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P15.33) MUTATED       98     89     65
  AMP PEAK  7(5P15.33) WILD-TYPE     27     23     26
D7V11, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           98                             27
  CLUS_2                           89                             23
  CLUS_3                           65                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  7(5P15.33) MUTATED       39     29     18     16     32     48
  AMP PEAK  7(5P15.33) WILD-TYPE     14      5     10     10      6     11
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK  7(5P15.33) MUTATED       22     19     29
  AMP PEAK  7(5P15.33) WILD-TYPE      9      2      9
D7V12, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           39                             14
  CLUS_2                           29                              5
  CLUS_3                           18                             10
  CLUS_4                           16                             10
  CLUS_5                           32                              6
  CLUS_6                           48                             11
  CLUS_7                           22                              9
  CLUS_8                           19                              2
  CLUS_9                           29                              9
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(8) Variable = AMP PEAK  8(5P12) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(5P12) MUTATED       32     39     23     20
  AMP PEAK  8(5P12) WILD-TYPE     10     13      9      8
D8V1, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                        32                          10
  CLUS_2                        39                          13
  CLUS_3                        23                           9
  CLUS_4                        20                           8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P12) MUTATED       33     42     39
  AMP PEAK  8(5P12) WILD-TYPE     14     14     12
D8V2, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                        33                          14
  CLUS_2                        42                          14
  CLUS_3                        39                          12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P12) MUTATED      114    111    121
  AMP PEAK  8(5P12) WILD-TYPE     79     51     14
D8V3, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                       114                          79
  CLUS_2                       111                          51
  CLUS_3                       121                          14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P12) MUTATED       90     78     81
  AMP PEAK  8(5P12) WILD-TYPE     52     36     19
D8V4, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                        90                          52
  CLUS_2                        78                          36
  CLUS_3                        81                          19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P12) MUTATED       40     51     49
  AMP PEAK  8(5P12) WILD-TYPE     20     22     12
D8V5, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                        40                          20
  CLUS_2                        51                          22
  CLUS_3                        49                          12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(5P12) MUTATED       40     28     38     34
  AMP PEAK  8(5P12) WILD-TYPE     14     13     14     13
D8V6, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                        40                          14
  CLUS_2                        28                          13
  CLUS_3                        38                          14
  CLUS_4                        34                          13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(5P12) MUTATED       72    104    115     52
  AMP PEAK  8(5P12) WILD-TYPE     38     41     38     26
D8V7, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                        72                          38
  CLUS_2                       104                          41
  CLUS_3                       115                          38
  CLUS_4                        52                          26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P12) MUTATED      140    107     96
  AMP PEAK  8(5P12) WILD-TYPE     62     42     39
D8V8, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                       140                          62
  CLUS_2                       107                          42
  CLUS_3                        96                          39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(5P12) MUTATED      105     90     89     45
  AMP PEAK  8(5P12) WILD-TYPE     40     40     36     19
D8V9, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                       105                          40
  CLUS_2                        90                          40
  CLUS_3                        89                          36
  CLUS_4                        45                          19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P12) MUTATED       53    125    151
  AMP PEAK  8(5P12) WILD-TYPE     21     68     46
D8V10, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                        53                          21
  CLUS_2                       125                          68
  CLUS_3                       151                          46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P12) MUTATED       90     76     61
  AMP PEAK  8(5P12) WILD-TYPE     35     36     30
D8V11, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                        90                          35
  CLUS_2                        76                          36
  CLUS_3                        61                          30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK  8(5P12) MUTATED       34     24     17     15     27     47     21
  AMP PEAK  8(5P12) WILD-TYPE     19     10     11     11     11     12     10
                             vv
clus                          CLUS_8 CLUS_9
  AMP PEAK  8(5P12) MUTATED       16     26
  AMP PEAK  8(5P12) WILD-TYPE      5     12
D8V12, multiclass
        clus
vv       AMP PEAK  8(5P12) MUTATED AMP PEAK  8(5P12) WILD-TYPE
  CLUS_1                        34                          19
  CLUS_2                        24                          10
  CLUS_3                        17                          11
  CLUS_4                        15                          11
  CLUS_5                        27                          11
  CLUS_6                        47                          12
  CLUS_7                        21                          10
  CLUS_8                        16                           5
  CLUS_9                        26                          12
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(9) Variable = AMP PEAK  9(6P12.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6P12.1) MUTATED       12     18     12     12
  AMP PEAK  9(6P12.1) WILD-TYPE     30     34     20     16
D9V1, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          12                            30
  CLUS_2                          18                            34
  CLUS_3                          12                            20
  CLUS_4                          12                            16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P12.1) MUTATED       14     19     21
  AMP PEAK  9(6P12.1) WILD-TYPE     33     37     30
D9V2, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          14                            33
  CLUS_2                          19                            37
  CLUS_3                          21                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P12.1) MUTATED       41     66     55
  AMP PEAK  9(6P12.1) WILD-TYPE    152     96     80
D9V3, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          41                           152
  CLUS_2                          66                            96
  CLUS_3                          55                            80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P12.1) MUTATED       36     45     30
  AMP PEAK  9(6P12.1) WILD-TYPE    106     69     70
D9V4, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          36                           106
  CLUS_2                          45                            69
  CLUS_3                          30                            70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P12.1) MUTATED       20     25     19
  AMP PEAK  9(6P12.1) WILD-TYPE     40     48     42
D9V5, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          20                            40
  CLUS_2                          25                            48
  CLUS_3                          19                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6P12.1) MUTATED       15     12     18     19
  AMP PEAK  9(6P12.1) WILD-TYPE     39     29     34     28
D9V6, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          15                            39
  CLUS_2                          12                            29
  CLUS_3                          18                            34
  CLUS_4                          19                            28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6P12.1) MUTATED       21     59     55     25
  AMP PEAK  9(6P12.1) WILD-TYPE     89     86     98     53
D9V7, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          21                            89
  CLUS_2                          59                            86
  CLUS_3                          55                            98
  CLUS_4                          25                            53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P12.1) MUTATED       52     57     51
  AMP PEAK  9(6P12.1) WILD-TYPE    150     92     84
D9V8, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          52                           150
  CLUS_2                          57                            92
  CLUS_3                          51                            84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6P12.1) MUTATED       49     46     35     23
  AMP PEAK  9(6P12.1) WILD-TYPE     96     84     90     41
D9V9, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          49                            96
  CLUS_2                          46                            84
  CLUS_3                          35                            90
  CLUS_4                          23                            41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P12.1) MUTATED       30     54     69
  AMP PEAK  9(6P12.1) WILD-TYPE     44    139    128
D9V10, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          30                            44
  CLUS_2                          54                           139
  CLUS_3                          69                           128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P12.1) MUTATED       51     27     30
  AMP PEAK  9(6P12.1) WILD-TYPE     74     85     61
D9V11, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          51                            74
  CLUS_2                          27                            85
  CLUS_3                          30                            61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  9(6P12.1) MUTATED       17     11      4     11     15     16
  AMP PEAK  9(6P12.1) WILD-TYPE     36     23     24     15     23     43
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  AMP PEAK  9(6P12.1) MUTATED       16      6     12
  AMP PEAK  9(6P12.1) WILD-TYPE     15     15     26
D9V12, multiclass
        clus
vv       AMP PEAK  9(6P12.1) MUTATED AMP PEAK  9(6P12.1) WILD-TYPE
  CLUS_1                          17                            36
  CLUS_2                          11                            23
  CLUS_3                           4                            24
  CLUS_4                          11                            15
  CLUS_5                          15                            23
  CLUS_6                          16                            43
  CLUS_7                          16                            15
  CLUS_8                           6                            15
  CLUS_9                          12                            26
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(10) Variable = AMP PEAK 10(6Q12) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6Q12) MUTATED       13     17      8     10
  AMP PEAK 10(6Q12) WILD-TYPE     29     35     24     18
D10V1, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        13                          29
  CLUS_2                        17                          35
  CLUS_3                         8                          24
  CLUS_4                        10                          18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q12) MUTATED       13     18     17
  AMP PEAK 10(6Q12) WILD-TYPE     34     38     34
D10V2, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        13                          34
  CLUS_2                        18                          38
  CLUS_3                        17                          34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q12) MUTATED       38     59     50
  AMP PEAK 10(6Q12) WILD-TYPE    155    103     85
D10V3, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        38                         155
  CLUS_2                        59                         103
  CLUS_3                        50                          85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q12) MUTATED       32     48     23
  AMP PEAK 10(6Q12) WILD-TYPE    110     66     77
D10V4, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        32                         110
  CLUS_2                        48                          66
  CLUS_3                        23                          77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q12) MUTATED       22     20     18
  AMP PEAK 10(6Q12) WILD-TYPE     38     53     43
D10V5, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        22                          38
  CLUS_2                        20                          53
  CLUS_3                        18                          43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6Q12) MUTATED       17     11     14     18
  AMP PEAK 10(6Q12) WILD-TYPE     37     30     38     29
D10V6, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        17                          37
  CLUS_2                        11                          30
  CLUS_3                        14                          38
  CLUS_4                        18                          29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6Q12) MUTATED       19     56     50     20
  AMP PEAK 10(6Q12) WILD-TYPE     91     89    103     58
D10V7, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        19                          91
  CLUS_2                        56                          89
  CLUS_3                        50                         103
  CLUS_4                        20                          58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q12) MUTATED       43     56     46
  AMP PEAK 10(6Q12) WILD-TYPE    159     93     89
D10V8, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        43                         159
  CLUS_2                        56                          93
  CLUS_3                        46                          89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6Q12) MUTATED       51     36     32     22
  AMP PEAK 10(6Q12) WILD-TYPE     94     94     93     42
D10V9, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        51                          94
  CLUS_2                        36                          94
  CLUS_3                        32                          93
  CLUS_4                        22                          42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q12) MUTATED       29     46     66
  AMP PEAK 10(6Q12) WILD-TYPE     45    147    131
D10V10, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        29                          45
  CLUS_2                        46                         147
  CLUS_3                        66                         131
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q12) MUTATED       42     27     29
  AMP PEAK 10(6Q12) WILD-TYPE     83     85     62
D10V11, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        42                          83
  CLUS_2                        27                          85
  CLUS_3                        29                          62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 10(6Q12) MUTATED       16      9      4      9     14     14     17
  AMP PEAK 10(6Q12) WILD-TYPE     37     25     24     17     24     45     14
                             vv
clus                          CLUS_8 CLUS_9
  AMP PEAK 10(6Q12) MUTATED        5     10
  AMP PEAK 10(6Q12) WILD-TYPE     16     28
D10V12, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        16                          37
  CLUS_2                         9                          25
  CLUS_3                         4                          24
  CLUS_4                         9                          17
  CLUS_5                        14                          24
  CLUS_6                        14                          45
  CLUS_7                        17                          14
  CLUS_8                         5                          16
  CLUS_9                        10                          28
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(11) Variable = AMP PEAK 11(7P11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED       21     34     15     11
  AMP PEAK 11(7P11.2) WILD-TYPE     21     18     17     17
D11V1, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          21                            21
  CLUS_2                          34                            18
  CLUS_3                          15                            17
  CLUS_4                          11                            17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       23     37     21
  AMP PEAK 11(7P11.2) WILD-TYPE     24     19     30
D11V2, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          23                            24
  CLUS_2                          37                            19
  CLUS_3                          21                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       75    107     67
  AMP PEAK 11(7P11.2) WILD-TYPE    118     55     68
D11V3, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          75                           118
  CLUS_2                         107                            55
  CLUS_3                          67                            68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       57     71     51
  AMP PEAK 11(7P11.2) WILD-TYPE     85     43     49
D11V4, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          57                            85
  CLUS_2                          71                            43
  CLUS_3                          51                            49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       26     37     30
  AMP PEAK 11(7P11.2) WILD-TYPE     34     36     31
D11V5, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          26                            34
  CLUS_2                          37                            36
  CLUS_3                          30                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED       22     22     25     24
  AMP PEAK 11(7P11.2) WILD-TYPE     32     19     27     23
D11V6, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          22                            32
  CLUS_2                          22                            19
  CLUS_3                          25                            27
  CLUS_4                          24                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED       52     92     72     31
  AMP PEAK 11(7P11.2) WILD-TYPE     58     53     81     47
D11V7, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          52                            58
  CLUS_2                          92                            53
  CLUS_3                          72                            81
  CLUS_4                          31                            47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       94     97     56
  AMP PEAK 11(7P11.2) WILD-TYPE    108     52     79
D11V8, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          94                           108
  CLUS_2                          97                            52
  CLUS_3                          56                            79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED       73     78     53     36
  AMP PEAK 11(7P11.2) WILD-TYPE     72     52     72     28
D11V9, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          73                            72
  CLUS_2                          78                            52
  CLUS_3                          53                            72
  CLUS_4                          36                            28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       49     91    100
  AMP PEAK 11(7P11.2) WILD-TYPE     25    102     97
D11V10, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          49                            25
  CLUS_2                          91                           102
  CLUS_3                         100                            97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       75     55     36
  AMP PEAK 11(7P11.2) WILD-TYPE     50     57     55
D11V11, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          75                            50
  CLUS_2                          55                            57
  CLUS_3                          36                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 11(7P11.2) MUTATED       32     16      8     17     13     25
  AMP PEAK 11(7P11.2) WILD-TYPE     21     18     20      9     25     34
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 11(7P11.2) MUTATED       22     10     23
  AMP PEAK 11(7P11.2) WILD-TYPE      9     11     15
D11V12, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          32                            21
  CLUS_2                          16                            18
  CLUS_3                           8                            20
  CLUS_4                          17                             9
  CLUS_5                          13                            25
  CLUS_6                          25                            34
  CLUS_7                          22                             9
  CLUS_8                          10                            11
  CLUS_9                          23                            15
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(12) Variable = AMP PEAK 12(7Q21.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q21.2) MUTATED       28     35     15     13
  AMP PEAK 12(7Q21.2) WILD-TYPE     14     17     17     15
D12V1, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          28                            14
  CLUS_2                          35                            17
  CLUS_3                          15                            17
  CLUS_4                          13                            15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       30     39     22
  AMP PEAK 12(7Q21.2) WILD-TYPE     17     17     29
D12V2, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          30                            17
  CLUS_2                          39                            17
  CLUS_3                          22                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       62    120     76
  AMP PEAK 12(7Q21.2) WILD-TYPE    131     42     59
D12V3, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          62                           131
  CLUS_2                         120                            42
  CLUS_3                          76                            59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       49     76     55
  AMP PEAK 12(7Q21.2) WILD-TYPE     93     38     45
D12V4, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          49                            93
  CLUS_2                          76                            38
  CLUS_3                          55                            45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       35     43     25
  AMP PEAK 12(7Q21.2) WILD-TYPE     25     30     36
D12V5, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          35                            25
  CLUS_2                          43                            30
  CLUS_3                          25                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q21.2) MUTATED       27     21     32     23
  AMP PEAK 12(7Q21.2) WILD-TYPE     27     20     20     24
D12V6, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          27                            27
  CLUS_2                          21                            20
  CLUS_3                          32                            20
  CLUS_4                          23                            24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q21.2) MUTATED       52    104     70     30
  AMP PEAK 12(7Q21.2) WILD-TYPE     58     41     83     48
D12V7, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          52                            58
  CLUS_2                         104                            41
  CLUS_3                          70                            83
  CLUS_4                          30                            48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       92    105     59
  AMP PEAK 12(7Q21.2) WILD-TYPE    110     44     76
D12V8, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          92                           110
  CLUS_2                         105                            44
  CLUS_3                          59                            76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q21.2) MUTATED       83     75     48     42
  AMP PEAK 12(7Q21.2) WILD-TYPE     62     55     77     22
D12V9, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          83                            62
  CLUS_2                          75                            55
  CLUS_3                          48                            77
  CLUS_4                          42                            22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       52     97     99
  AMP PEAK 12(7Q21.2) WILD-TYPE     22     96     98
D12V10, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          52                            22
  CLUS_2                          97                            96
  CLUS_3                          99                            98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       77     49     38
  AMP PEAK 12(7Q21.2) WILD-TYPE     48     63     53
D12V11, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          77                            48
  CLUS_2                          49                            63
  CLUS_3                          38                            53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 12(7Q21.2) MUTATED       32     15      6     16     14     22
  AMP PEAK 12(7Q21.2) WILD-TYPE     21     19     22     10     24     37
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 12(7Q21.2) MUTATED       23     12     24
  AMP PEAK 12(7Q21.2) WILD-TYPE      8      9     14
D12V12, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          32                            21
  CLUS_2                          15                            19
  CLUS_3                           6                            22
  CLUS_4                          16                            10
  CLUS_5                          14                            24
  CLUS_6                          22                            37
  CLUS_7                          23                             8
  CLUS_8                          12                             9
  CLUS_9                          24                            14
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(13) Variable = AMP PEAK 13(8P11.23) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8P11.23) MUTATED       30     24     12     12
  AMP PEAK 13(8P11.23) WILD-TYPE     12     28     20     16
D13V1, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           30                             12
  CLUS_2                           24                             28
  CLUS_3                           12                             20
  CLUS_4                           12                             16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P11.23) MUTATED       30     26     22
  AMP PEAK 13(8P11.23) WILD-TYPE     17     30     29
D13V2, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           30                             17
  CLUS_2                           26                             30
  CLUS_3                           22                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P11.23) MUTATED       76     74     82
  AMP PEAK 13(8P11.23) WILD-TYPE    117     88     53
D13V3, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           76                            117
  CLUS_2                           74                             88
  CLUS_3                           82                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P11.23) MUTATED       55     51     57
  AMP PEAK 13(8P11.23) WILD-TYPE     87     63     43
D13V4, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           55                             87
  CLUS_2                           51                             63
  CLUS_3                           57                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P11.23) MUTATED       25     42     31
  AMP PEAK 13(8P11.23) WILD-TYPE     35     31     30
D13V5, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           25                             35
  CLUS_2                           42                             31
  CLUS_3                           31                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8P11.23) MUTATED       22     25     28     23
  AMP PEAK 13(8P11.23) WILD-TYPE     32     16     24     24
D13V6, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           22                             32
  CLUS_2                           25                             16
  CLUS_3                           28                             24
  CLUS_4                           23                             24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8P11.23) MUTATED       64     68     67     30
  AMP PEAK 13(8P11.23) WILD-TYPE     46     77     86     48
D13V7, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           64                             46
  CLUS_2                           68                             77
  CLUS_3                           67                             86
  CLUS_4                           30                             48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P11.23) MUTATED      102     72     55
  AMP PEAK 13(8P11.23) WILD-TYPE    100     77     80
D13V8, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                          102                            100
  CLUS_2                           72                             77
  CLUS_3                           55                             80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8P11.23) MUTATED       73     61     54     29
  AMP PEAK 13(8P11.23) WILD-TYPE     72     69     71     35
D13V9, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           73                             72
  CLUS_2                           61                             69
  CLUS_3                           54                             71
  CLUS_4                           29                             35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P11.23) MUTATED       32     83    102
  AMP PEAK 13(8P11.23) WILD-TYPE     42    110     95
D13V10, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           32                             42
  CLUS_2                           83                            110
  CLUS_3                          102                             95
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P11.23) MUTATED       58     51     38
  AMP PEAK 13(8P11.23) WILD-TYPE     67     61     53
D13V11, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           58                             67
  CLUS_2                           51                             61
  CLUS_3                           38                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 13(8P11.23) MUTATED       25     16     12      7     19     21
  AMP PEAK 13(8P11.23) WILD-TYPE     28     18     16     19     19     38
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 13(8P11.23) MUTATED       14     10     23
  AMP PEAK 13(8P11.23) WILD-TYPE     17     11     15
D13V12, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           25                             28
  CLUS_2                           16                             18
  CLUS_3                           12                             16
  CLUS_4                            7                             19
  CLUS_5                           19                             19
  CLUS_6                           21                             38
  CLUS_7                           14                             17
  CLUS_8                           10                             11
  CLUS_9                           23                             15
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(14) Variable = AMP PEAK 14(8Q24.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(8Q24.21) MUTATED       30     34     22     20
  AMP PEAK 14(8Q24.21) WILD-TYPE     12     18     10      8
D14V1, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           30                             12
  CLUS_2                           34                             18
  CLUS_3                           22                             10
  CLUS_4                           20                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8Q24.21) MUTATED       32     37     37
  AMP PEAK 14(8Q24.21) WILD-TYPE     15     19     14
D14V2, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           32                             15
  CLUS_2                           37                             19
  CLUS_3                           37                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8Q24.21) MUTATED      124    110    108
  AMP PEAK 14(8Q24.21) WILD-TYPE     69     52     27
D14V3, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                          124                             69
  CLUS_2                          110                             52
  CLUS_3                          108                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8Q24.21) MUTATED       96     78     76
  AMP PEAK 14(8Q24.21) WILD-TYPE     46     36     24
D14V4, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           96                             46
  CLUS_2                           78                             36
  CLUS_3                           76                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8Q24.21) MUTATED       44     55     43
  AMP PEAK 14(8Q24.21) WILD-TYPE     16     18     18
D14V5, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           44                             16
  CLUS_2                           55                             18
  CLUS_3                           43                             18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(8Q24.21) MUTATED       39     27     41     35
  AMP PEAK 14(8Q24.21) WILD-TYPE     15     14     11     12
D14V6, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           39                             15
  CLUS_2                           27                             14
  CLUS_3                           41                             11
  CLUS_4                           35                             12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(8Q24.21) MUTATED       76     99    111     53
  AMP PEAK 14(8Q24.21) WILD-TYPE     34     46     42     25
D14V7, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           76                             34
  CLUS_2                           99                             46
  CLUS_3                          111                             42
  CLUS_4                           53                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8Q24.21) MUTATED      141    103     95
  AMP PEAK 14(8Q24.21) WILD-TYPE     61     46     40
D14V8, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                          141                             61
  CLUS_2                          103                             46
  CLUS_3                           95                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(8Q24.21) MUTATED      102     95     87     40
  AMP PEAK 14(8Q24.21) WILD-TYPE     43     35     38     24
D14V9, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                          102                             43
  CLUS_2                           95                             35
  CLUS_3                           87                             38
  CLUS_4                           40                             24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8Q24.21) MUTATED       51    128    145
  AMP PEAK 14(8Q24.21) WILD-TYPE     23     65     52
D14V10, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           51                             23
  CLUS_2                          128                             65
  CLUS_3                          145                             52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8Q24.21) MUTATED       90     81     58
  AMP PEAK 14(8Q24.21) WILD-TYPE     35     31     33
D14V11, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           90                             35
  CLUS_2                           81                             31
  CLUS_3                           58                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 14(8Q24.21) MUTATED       38     24     15     20     28     38
  AMP PEAK 14(8Q24.21) WILD-TYPE     15     10     13      6     10     21
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 14(8Q24.21) MUTATED       22     17     27
  AMP PEAK 14(8Q24.21) WILD-TYPE      9      4     11
D14V12, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           38                             15
  CLUS_2                           24                             10
  CLUS_3                           15                             13
  CLUS_4                           20                              6
  CLUS_5                           28                             10
  CLUS_6                           38                             21
  CLUS_7                           22                              9
  CLUS_8                           17                              4
  CLUS_9                           27                             11
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(15) Variable = AMP PEAK 15(9P13.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(9P13.3) MUTATED       10     13      5     12
  AMP PEAK 15(9P13.3) WILD-TYPE     32     39     27     16
D15V1, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          10                            32
  CLUS_2                          13                            39
  CLUS_3                           5                            27
  CLUS_4                          12                            16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(9P13.3) MUTATED       13     16     11
  AMP PEAK 15(9P13.3) WILD-TYPE     34     40     40
D15V2, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          13                            34
  CLUS_2                          16                            40
  CLUS_3                          11                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(9P13.3) MUTATED       40     60     34
  AMP PEAK 15(9P13.3) WILD-TYPE    153    102    101
D15V3, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          40                           153
  CLUS_2                          60                           102
  CLUS_3                          34                           101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(9P13.3) MUTATED       31     47     25
  AMP PEAK 15(9P13.3) WILD-TYPE    111     67     75
D15V4, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          31                           111
  CLUS_2                          47                            67
  CLUS_3                          25                            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(9P13.3) MUTATED       21     13     14
  AMP PEAK 15(9P13.3) WILD-TYPE     39     60     47
D15V5, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          21                            39
  CLUS_2                          13                            60
  CLUS_3                          14                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(9P13.3) MUTATED       21      3     11     13
  AMP PEAK 15(9P13.3) WILD-TYPE     33     38     41     34
D15V6, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          21                            33
  CLUS_2                           3                            38
  CLUS_3                          11                            41
  CLUS_4                          13                            34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(9P13.3) MUTATED       21     57     42     14
  AMP PEAK 15(9P13.3) WILD-TYPE     89     88    111     64
D15V7, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          21                            89
  CLUS_2                          57                            88
  CLUS_3                          42                           111
  CLUS_4                          14                            64
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(9P13.3) MUTATED       42     58     34
  AMP PEAK 15(9P13.3) WILD-TYPE    160     91    101
D15V8, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          42                           160
  CLUS_2                          58                            91
  CLUS_3                          34                           101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(9P13.3) MUTATED       44     39     23     23
  AMP PEAK 15(9P13.3) WILD-TYPE    101     91    102     41
D15V9, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          44                           101
  CLUS_2                          39                            91
  CLUS_3                          23                           102
  CLUS_4                          23                            41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(9P13.3) MUTATED       27     54     48
  AMP PEAK 15(9P13.3) WILD-TYPE     47    139    149
D15V10, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          27                            47
  CLUS_2                          54                           139
  CLUS_3                          48                           149
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(9P13.3) MUTATED       42     24     23
  AMP PEAK 15(9P13.3) WILD-TYPE     83     88     68
D15V11, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          42                            83
  CLUS_2                          24                            88
  CLUS_3                          23                            68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 15(9P13.3) MUTATED       14      7      2      8     13     13
  AMP PEAK 15(9P13.3) WILD-TYPE     39     27     26     18     25     46
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 15(9P13.3) MUTATED       14      8     10
  AMP PEAK 15(9P13.3) WILD-TYPE     17     13     28
D15V12, multiclass
        clus
vv       AMP PEAK 15(9P13.3) MUTATED AMP PEAK 15(9P13.3) WILD-TYPE
  CLUS_1                          14                            39
  CLUS_2                           7                            27
  CLUS_3                           2                            26
  CLUS_4                           8                            18
  CLUS_5                          13                            25
  CLUS_6                          13                            46
  CLUS_7                          14                            17
  CLUS_8                           8                            13
  CLUS_9                          10                            28
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(16) Variable = AMP PEAK 16(11Q13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(11Q13.3) MUTATED       17     11     11     14
  AMP PEAK 16(11Q13.3) WILD-TYPE     25     41     21     14
D16V1, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           17                             25
  CLUS_2                           11                             41
  CLUS_3                           11                             21
  CLUS_4                           14                             14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(11Q13.3) MUTATED       19     12     22
  AMP PEAK 16(11Q13.3) WILD-TYPE     28     44     29
D16V2, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           19                             28
  CLUS_2                           12                             44
  CLUS_3                           22                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(11Q13.3) MUTATED       48     61     72
  AMP PEAK 16(11Q13.3) WILD-TYPE    145    101     63
D16V3, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           48                            145
  CLUS_2                           61                            101
  CLUS_3                           72                             63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(11Q13.3) MUTATED       40     41     54
  AMP PEAK 16(11Q13.3) WILD-TYPE    102     73     46
D16V4, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           40                            102
  CLUS_2                           41                             73
  CLUS_3                           54                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(11Q13.3) MUTATED       26     24     18
  AMP PEAK 16(11Q13.3) WILD-TYPE     34     49     43
D16V5, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           26                             34
  CLUS_2                           24                             49
  CLUS_3                           18                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(11Q13.3) MUTATED       20     10     22     16
  AMP PEAK 16(11Q13.3) WILD-TYPE     34     31     30     31
D16V6, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           20                             34
  CLUS_2                           10                             31
  CLUS_3                           22                             30
  CLUS_4                           16                             31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(11Q13.3) MUTATED       46     40     68     27
  AMP PEAK 16(11Q13.3) WILD-TYPE     64    105     85     51
D16V7, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           46                             64
  CLUS_2                           40                            105
  CLUS_3                           68                             85
  CLUS_4                           27                             51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(11Q13.3) MUTATED       83     44     54
  AMP PEAK 16(11Q13.3) WILD-TYPE    119    105     81
D16V8, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           83                            119
  CLUS_2                           44                            105
  CLUS_3                           54                             81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(11Q13.3) MUTATED       54     64     42     14
  AMP PEAK 16(11Q13.3) WILD-TYPE     91     66     83     50
D16V9, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           54                             91
  CLUS_2                           64                             66
  CLUS_3                           42                             83
  CLUS_4                           14                             50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(11Q13.3) MUTATED       21     69     84
  AMP PEAK 16(11Q13.3) WILD-TYPE     53    124    113
D16V10, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           21                             53
  CLUS_2                           69                            124
  CLUS_3                           84                            113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(11Q13.3) MUTATED       57     43     25
  AMP PEAK 16(11Q13.3) WILD-TYPE     68     69     66
D16V11, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           57                             68
  CLUS_2                           43                             69
  CLUS_3                           25                             66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 16(11Q13.3) MUTATED       18     19      6     10     21     14
  AMP PEAK 16(11Q13.3) WILD-TYPE     35     15     22     16     17     45
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 16(11Q13.3) MUTATED       10      8     19
  AMP PEAK 16(11Q13.3) WILD-TYPE     21     13     19
D16V12, multiclass
        clus
vv       AMP PEAK 16(11Q13.3) MUTATED AMP PEAK 16(11Q13.3) WILD-TYPE
  CLUS_1                           18                             35
  CLUS_2                           19                             15
  CLUS_3                            6                             22
  CLUS_4                           10                             16
  CLUS_5                           21                             17
  CLUS_6                           14                             45
  CLUS_7                           10                             21
  CLUS_8                            8                             13
  CLUS_9                           19                             19
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(17) Variable = AMP PEAK 17(12P13.33) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(12P13.33) MUTATED       12     33     13     13
  AMP PEAK 17(12P13.33) WILD-TYPE     30     19     19     15
D17V1, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            12                              30
  CLUS_2                            33                              19
  CLUS_3                            13                              19
  CLUS_4                            13                              15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(12P13.33) MUTATED       17     34     20
  AMP PEAK 17(12P13.33) WILD-TYPE     30     22     31
D17V2, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            17                              30
  CLUS_2                            34                              22
  CLUS_3                            20                              31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(12P13.33) MUTATED       70    106     73
  AMP PEAK 17(12P13.33) WILD-TYPE    123     56     62
D17V3, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            70                             123
  CLUS_2                           106                              56
  CLUS_3                            73                              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(12P13.33) MUTATED       60     73     60
  AMP PEAK 17(12P13.33) WILD-TYPE     82     41     40
D17V4, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            60                              82
  CLUS_2                            73                              41
  CLUS_3                            60                              40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(12P13.33) MUTATED       35     34     34
  AMP PEAK 17(12P13.33) WILD-TYPE     25     39     27
D17V5, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            35                              25
  CLUS_2                            34                              39
  CLUS_3                            34                              27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(12P13.33) MUTATED       32     20     25     26
  AMP PEAK 17(12P13.33) WILD-TYPE     22     21     27     21
D17V6, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            32                              22
  CLUS_2                            20                              21
  CLUS_3                            25                              27
  CLUS_4                            26                              21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(12P13.33) MUTATED       37     94     88     28
  AMP PEAK 17(12P13.33) WILD-TYPE     73     51     65     50
D17V7, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            37                              73
  CLUS_2                            94                              51
  CLUS_3                            88                              65
  CLUS_4                            28                              50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(12P13.33) MUTATED       87     88     72
  AMP PEAK 17(12P13.33) WILD-TYPE    115     61     63
D17V8, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            87                             115
  CLUS_2                            88                              61
  CLUS_3                            72                              63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(12P13.33) MUTATED       71     79     54     37
  AMP PEAK 17(12P13.33) WILD-TYPE     74     51     71     27
D17V9, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            71                              74
  CLUS_2                            79                              51
  CLUS_3                            54                              71
  CLUS_4                            37                              27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(12P13.33) MUTATED       48     86    107
  AMP PEAK 17(12P13.33) WILD-TYPE     26    107     90
D17V10, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            48                              26
  CLUS_2                            86                             107
  CLUS_3                           107                              90
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(12P13.33) MUTATED       74     58     43
  AMP PEAK 17(12P13.33) WILD-TYPE     51     54     48
D17V11, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            74                              51
  CLUS_2                            58                              54
  CLUS_3                            43                              48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 17(12P13.33) MUTATED       29     18     10     10     27     28
  AMP PEAK 17(12P13.33) WILD-TYPE     24     16     18     16     11     31
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 17(12P13.33) MUTATED       22     11     20
  AMP PEAK 17(12P13.33) WILD-TYPE      9     10     18
D17V12, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            29                              24
  CLUS_2                            18                              16
  CLUS_3                            10                              18
  CLUS_4                            10                              16
  CLUS_5                            27                              11
  CLUS_6                            28                              31
  CLUS_7                            22                               9
  CLUS_8                            11                              10
  CLUS_9                            20                              18
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(18) Variable = AMP PEAK 18(12Q15) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(12Q15) MUTATED       10     21     11     14
  AMP PEAK 18(12Q15) WILD-TYPE     32     31     21     14
D18V1, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         10                           32
  CLUS_2                         21                           31
  CLUS_3                         11                           21
  CLUS_4                         14                           14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(12Q15) MUTATED       13     23     20
  AMP PEAK 18(12Q15) WILD-TYPE     34     33     31
D18V2, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         13                           34
  CLUS_2                         23                           33
  CLUS_3                         20                           31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(12Q15) MUTATED       51     79     48
  AMP PEAK 18(12Q15) WILD-TYPE    142     83     87
D18V3, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         51                          142
  CLUS_2                         79                           83
  CLUS_3                         48                           87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(12Q15) MUTATED       40     52     38
  AMP PEAK 18(12Q15) WILD-TYPE    102     62     62
D18V4, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         40                          102
  CLUS_2                         52                           62
  CLUS_3                         38                           62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(12Q15) MUTATED       25     26     23
  AMP PEAK 18(12Q15) WILD-TYPE     35     47     38
D18V5, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         25                           35
  CLUS_2                         26                           47
  CLUS_3                         23                           38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(12Q15) MUTATED       23     14     16     21
  AMP PEAK 18(12Q15) WILD-TYPE     31     27     36     26
D18V6, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         23                           31
  CLUS_2                         14                           27
  CLUS_3                         16                           36
  CLUS_4                         21                           26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(12Q15) MUTATED       29     67     54     26
  AMP PEAK 18(12Q15) WILD-TYPE     81     78     99     52
D18V7, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         29                           81
  CLUS_2                         67                           78
  CLUS_3                         54                           99
  CLUS_4                         26                           52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(12Q15) MUTATED       54     65     57
  AMP PEAK 18(12Q15) WILD-TYPE    148     84     78
D18V8, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         54                          148
  CLUS_2                         65                           84
  CLUS_3                         57                           78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(12Q15) MUTATED       53     49     40     26
  AMP PEAK 18(12Q15) WILD-TYPE     92     81     85     38
D18V9, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         53                           92
  CLUS_2                         49                           81
  CLUS_3                         40                           85
  CLUS_4                         26                           38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(12Q15) MUTATED       34     67     67
  AMP PEAK 18(12Q15) WILD-TYPE     40    126    130
D18V10, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         34                           40
  CLUS_2                         67                          126
  CLUS_3                         67                          130
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(12Q15) MUTATED       54     33     31
  AMP PEAK 18(12Q15) WILD-TYPE     71     79     60
D18V11, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         54                           71
  CLUS_2                         33                           79
  CLUS_3                         31                           60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 18(12Q15) MUTATED       16      9      8     11     18     14     18
  AMP PEAK 18(12Q15) WILD-TYPE     37     25     20     15     20     45     13
                              vv
clus                           CLUS_8 CLUS_9
  AMP PEAK 18(12Q15) MUTATED        8     16
  AMP PEAK 18(12Q15) WILD-TYPE     13     22
D18V12, multiclass
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  CLUS_1                         16                           37
  CLUS_2                          9                           25
  CLUS_3                          8                           20
  CLUS_4                         11                           15
  CLUS_5                         18                           20
  CLUS_6                         14                           45
  CLUS_7                         18                           13
  CLUS_8                          8                           13
  CLUS_9                         16                           22
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(19) Variable = AMP PEAK 19(13Q34) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(13Q34) MUTATED        7     10      5      5
  AMP PEAK 19(13Q34) WILD-TYPE     35     42     27     23
D19V1, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                          7                           35
  CLUS_2                         10                           42
  CLUS_3                          5                           27
  CLUS_4                          5                           23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(13Q34) MUTATED        7     10     10
  AMP PEAK 19(13Q34) WILD-TYPE     40     46     41
D19V2, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                          7                           40
  CLUS_2                         10                           46
  CLUS_3                         10                           41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(13Q34) MUTATED       36     33     19
  AMP PEAK 19(13Q34) WILD-TYPE    157    129    116
D19V3, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                         36                          157
  CLUS_2                         33                          129
  CLUS_3                         19                          116
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(13Q34) MUTATED       24     22     21
  AMP PEAK 19(13Q34) WILD-TYPE    118     92     79
D19V4, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                         24                          118
  CLUS_2                         22                           92
  CLUS_3                         21                           79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(13Q34) MUTATED       10     15     11
  AMP PEAK 19(13Q34) WILD-TYPE     50     58     50
D19V5, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                         10                           50
  CLUS_2                         15                           58
  CLUS_3                         11                           50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(13Q34) MUTATED       10      4     14      8
  AMP PEAK 19(13Q34) WILD-TYPE     44     37     38     39
D19V6, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                         10                           44
  CLUS_2                          4                           37
  CLUS_3                         14                           38
  CLUS_4                          8                           39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(13Q34) MUTATED       19     26     31     12
  AMP PEAK 19(13Q34) WILD-TYPE     91    119    122     66
D19V7, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                         19                           91
  CLUS_2                         26                          119
  CLUS_3                         31                          122
  CLUS_4                         12                           66
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(13Q34) MUTATED       31     26     31
  AMP PEAK 19(13Q34) WILD-TYPE    171    123    104
D19V8, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                         31                          171
  CLUS_2                         26                          123
  CLUS_3                         31                          104
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(13Q34) MUTATED       29     26     21      7
  AMP PEAK 19(13Q34) WILD-TYPE    116    104    104     57
D19V9, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                         29                          116
  CLUS_2                         26                          104
  CLUS_3                         21                          104
  CLUS_4                          7                           57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(13Q34) MUTATED        6     39     38
  AMP PEAK 19(13Q34) WILD-TYPE     68    154    159
D19V10, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                          6                           68
  CLUS_2                         39                          154
  CLUS_3                         38                          159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(13Q34) MUTATED       23     23     14
  AMP PEAK 19(13Q34) WILD-TYPE    102     89     77
D19V11, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                         23                          102
  CLUS_2                         23                           89
  CLUS_3                         14                           77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 19(13Q34) MUTATED       10      7      6      3     13      8      2
  AMP PEAK 19(13Q34) WILD-TYPE     43     27     22     23     25     51     29
                              vv
clus                           CLUS_8 CLUS_9
  AMP PEAK 19(13Q34) MUTATED        5      6
  AMP PEAK 19(13Q34) WILD-TYPE     16     32
D19V12, multiclass
        clus
vv       AMP PEAK 19(13Q34) MUTATED AMP PEAK 19(13Q34) WILD-TYPE
  CLUS_1                         10                           43
  CLUS_2                          7                           27
  CLUS_3                          6                           22
  CLUS_4                          3                           23
  CLUS_5                         13                           25
  CLUS_6                          8                           51
  CLUS_7                          2                           29
  CLUS_8                          5                           16
  CLUS_9                          6                           32
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(20) Variable = AMP PEAK 20(14Q13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(14Q13.3) MUTATED       18     15      8     11
  AMP PEAK 20(14Q13.3) WILD-TYPE     24     37     24     17
D20V1, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           18                             24
  CLUS_2                           15                             37
  CLUS_3                            8                             24
  CLUS_4                           11                             17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(14Q13.3) MUTATED       23     15     14
  AMP PEAK 20(14Q13.3) WILD-TYPE     24     41     37
D20V2, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           23                             24
  CLUS_2                           15                             41
  CLUS_3                           14                             37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(14Q13.3) MUTATED       51     55     48
  AMP PEAK 20(14Q13.3) WILD-TYPE    142    107     87
D20V3, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           51                            142
  CLUS_2                           55                            107
  CLUS_3                           48                             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(14Q13.3) MUTATED       36     42     32
  AMP PEAK 20(14Q13.3) WILD-TYPE    106     72     68
D20V4, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           36                            106
  CLUS_2                           42                             72
  CLUS_3                           32                             68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(14Q13.3) MUTATED       18     26     18
  AMP PEAK 20(14Q13.3) WILD-TYPE     42     47     43
D20V5, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           18                             42
  CLUS_2                           26                             47
  CLUS_3                           18                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(14Q13.3) MUTATED       15      8     22     17
  AMP PEAK 20(14Q13.3) WILD-TYPE     39     33     30     30
D20V6, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           15                             39
  CLUS_2                            8                             33
  CLUS_3                           22                             30
  CLUS_4                           17                             30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(14Q13.3) MUTATED       42     46     39     27
  AMP PEAK 20(14Q13.3) WILD-TYPE     68     99    114     51
D20V7, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           42                             68
  CLUS_2                           46                             99
  CLUS_3                           39                            114
  CLUS_4                           27                             51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(14Q13.3) MUTATED       76     45     33
  AMP PEAK 20(14Q13.3) WILD-TYPE    126    104    102
D20V8, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           76                            126
  CLUS_2                           45                            104
  CLUS_3                           33                            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(14Q13.3) MUTATED       53     48     38     10
  AMP PEAK 20(14Q13.3) WILD-TYPE     92     82     87     54
D20V9, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           53                             92
  CLUS_2                           48                             82
  CLUS_3                           38                             87
  CLUS_4                           10                             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(14Q13.3) MUTATED       16     66     67
  AMP PEAK 20(14Q13.3) WILD-TYPE     58    127    130
D20V10, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           16                             58
  CLUS_2                           66                            127
  CLUS_3                           67                            130
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(14Q13.3) MUTATED       40     38     22
  AMP PEAK 20(14Q13.3) WILD-TYPE     85     74     69
D20V11, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           40                             85
  CLUS_2                           38                             74
  CLUS_3                           22                             69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 20(14Q13.3) MUTATED       19     10      6     15      5     14
  AMP PEAK 20(14Q13.3) WILD-TYPE     34     24     22     11     33     45
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 20(14Q13.3) MUTATED        6      7     18
  AMP PEAK 20(14Q13.3) WILD-TYPE     25     14     20
D20V12, multiclass
        clus
vv       AMP PEAK 20(14Q13.3) MUTATED AMP PEAK 20(14Q13.3) WILD-TYPE
  CLUS_1                           19                             34
  CLUS_2                           10                             24
  CLUS_3                            6                             22
  CLUS_4                           15                             11
  CLUS_5                            5                             33
  CLUS_6                           14                             45
  CLUS_7                            6                             25
  CLUS_8                            7                             14
  CLUS_9                           18                             20
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(21) Variable = AMP PEAK 21(15Q26.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(15Q26.3) MUTATED       15     25     10      9
  AMP PEAK 21(15Q26.3) WILD-TYPE     27     27     22     19
D21V1, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           15                             27
  CLUS_2                           25                             27
  CLUS_3                           10                             22
  CLUS_4                            9                             19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       17     28     14
  AMP PEAK 21(15Q26.3) WILD-TYPE     30     28     37
D21V2, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           17                             30
  CLUS_2                           28                             28
  CLUS_3                           14                             37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       46     78     52
  AMP PEAK 21(15Q26.3) WILD-TYPE    147     84     83
D21V3, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           46                            147
  CLUS_2                           78                             84
  CLUS_3                           52                             83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       34     54     37
  AMP PEAK 21(15Q26.3) WILD-TYPE    108     60     63
D21V4, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           34                            108
  CLUS_2                           54                             60
  CLUS_3                           37                             63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       18     27     25
  AMP PEAK 21(15Q26.3) WILD-TYPE     42     46     36
D21V5, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           18                             42
  CLUS_2                           27                             46
  CLUS_3                           25                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(15Q26.3) MUTATED       12     15     19     24
  AMP PEAK 21(15Q26.3) WILD-TYPE     42     26     33     23
D21V6, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           12                             42
  CLUS_2                           15                             26
  CLUS_3                           19                             33
  CLUS_4                           24                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(15Q26.3) MUTATED       26     75     49     23
  AMP PEAK 21(15Q26.3) WILD-TYPE     84     70    104     55
D21V7, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           26                             84
  CLUS_2                           75                             70
  CLUS_3                           49                            104
  CLUS_4                           23                             55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       62     73     38
  AMP PEAK 21(15Q26.3) WILD-TYPE    140     76     97
D21V8, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           62                            140
  CLUS_2                           73                             76
  CLUS_3                           38                             97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(15Q26.3) MUTATED       51     50     35     34
  AMP PEAK 21(15Q26.3) WILD-TYPE     94     80     90     30
D21V9, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           51                             94
  CLUS_2                           50                             80
  CLUS_3                           35                             90
  CLUS_4                           34                             30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       38     58     74
  AMP PEAK 21(15Q26.3) WILD-TYPE     36    135    123
D21V10, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           38                             36
  CLUS_2                           58                            135
  CLUS_3                           74                            123
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(15Q26.3) MUTATED       54     27     33
  AMP PEAK 21(15Q26.3) WILD-TYPE     71     85     58
D21V11, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           54                             71
  CLUS_2                           27                             85
  CLUS_3                           33                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 21(15Q26.3) MUTATED       19      9     10      5     15     18
  AMP PEAK 21(15Q26.3) WILD-TYPE     34     25     18     21     23     41
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 21(15Q26.3) MUTATED       19      6     13
  AMP PEAK 21(15Q26.3) WILD-TYPE     12     15     25
D21V12, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           19                             34
  CLUS_2                            9                             25
  CLUS_3                           10                             18
  CLUS_4                            5                             21
  CLUS_5                           15                             23
  CLUS_6                           18                             41
  CLUS_7                           19                             12
  CLUS_8                            6                             15
  CLUS_9                           13                             25
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(22) Variable = AMP PEAK 22(17Q25.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(17Q25.1) MUTATED       20     31      9     19
  AMP PEAK 22(17Q25.1) WILD-TYPE     22     21     23      9
D22V1, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           20                             22
  CLUS_2                           31                             21
  CLUS_3                            9                             23
  CLUS_4                           19                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q25.1) MUTATED       24     34     21
  AMP PEAK 22(17Q25.1) WILD-TYPE     23     22     30
D22V2, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           24                             23
  CLUS_2                           34                             22
  CLUS_3                           21                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q25.1) MUTATED       54    111     68
  AMP PEAK 22(17Q25.1) WILD-TYPE    139     51     67
D22V3, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           54                            139
  CLUS_2                          111                             51
  CLUS_3                           68                             67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q25.1) MUTATED       40     72     52
  AMP PEAK 22(17Q25.1) WILD-TYPE    102     42     48
D22V4, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           40                            102
  CLUS_2                           72                             42
  CLUS_3                           52                             48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q25.1) MUTATED       31     32     24
  AMP PEAK 22(17Q25.1) WILD-TYPE     29     41     37
D22V5, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           31                             29
  CLUS_2                           32                             41
  CLUS_3                           24                             37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(17Q25.1) MUTATED       22     16     24     25
  AMP PEAK 22(17Q25.1) WILD-TYPE     32     25     28     22
D22V6, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           22                             32
  CLUS_2                           16                             25
  CLUS_3                           24                             28
  CLUS_4                           25                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(17Q25.1) MUTATED       42     94     68     27
  AMP PEAK 22(17Q25.1) WILD-TYPE     68     51     85     51
D22V7, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           42                             68
  CLUS_2                           94                             51
  CLUS_3                           68                             85
  CLUS_4                           27                             51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q25.1) MUTATED       81     95     55
  AMP PEAK 22(17Q25.1) WILD-TYPE    121     54     80
D22V8, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           81                            121
  CLUS_2                           95                             54
  CLUS_3                           55                             80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(17Q25.1) MUTATED       74     77     40     29
  AMP PEAK 22(17Q25.1) WILD-TYPE     71     53     85     35
D22V9, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           74                             71
  CLUS_2                           77                             53
  CLUS_3                           40                             85
  CLUS_4                           29                             35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q25.1) MUTATED       45     76     99
  AMP PEAK 22(17Q25.1) WILD-TYPE     29    117     98
D22V10, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           45                             29
  CLUS_2                           76                            117
  CLUS_3                           99                             98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(17Q25.1) MUTATED       79     38     36
  AMP PEAK 22(17Q25.1) WILD-TYPE     46     74     55
D22V11, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           79                             46
  CLUS_2                           38                             74
  CLUS_3                           36                             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 22(17Q25.1) MUTATED       27     10      8     11     17     23
  AMP PEAK 22(17Q25.1) WILD-TYPE     26     24     20     15     21     36
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 22(17Q25.1) MUTATED       23     12     22
  AMP PEAK 22(17Q25.1) WILD-TYPE      8      9     16
D22V12, multiclass
        clus
vv       AMP PEAK 22(17Q25.1) MUTATED AMP PEAK 22(17Q25.1) WILD-TYPE
  CLUS_1                           27                             26
  CLUS_2                           10                             24
  CLUS_3                            8                             20
  CLUS_4                           11                             15
  CLUS_5                           17                             21
  CLUS_6                           23                             36
  CLUS_7                           23                              8
  CLUS_8                           12                              9
  CLUS_9                           22                             16
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(23) Variable = AMP PEAK 23(18P11.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(18P11.32) MUTATED       13     27      8      8
  AMP PEAK 23(18P11.32) WILD-TYPE     29     25     24     20
D23V1, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            13                              29
  CLUS_2                            27                              25
  CLUS_3                             8                              24
  CLUS_4                             8                              20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       13     30     13
  AMP PEAK 23(18P11.32) WILD-TYPE     34     26     38
D23V2, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            13                              34
  CLUS_2                            30                              26
  CLUS_3                            13                              38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       42     82     51
  AMP PEAK 23(18P11.32) WILD-TYPE    151     80     84
D23V3, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            42                             151
  CLUS_2                            82                              80
  CLUS_3                            51                              84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       31     51     46
  AMP PEAK 23(18P11.32) WILD-TYPE    111     63     54
D23V4, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            31                             111
  CLUS_2                            51                              63
  CLUS_3                            46                              54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       26     28     20
  AMP PEAK 23(18P11.32) WILD-TYPE     34     45     41
D23V5, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            26                              34
  CLUS_2                            28                              45
  CLUS_3                            20                              41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(18P11.32) MUTATED       21     15     19     19
  AMP PEAK 23(18P11.32) WILD-TYPE     33     26     33     28
D23V6, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            21                              33
  CLUS_2                            15                              26
  CLUS_3                            19                              33
  CLUS_4                            19                              28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(18P11.32) MUTATED       35     66     51     22
  AMP PEAK 23(18P11.32) WILD-TYPE     75     79    102     56
D23V7, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            35                              75
  CLUS_2                            66                              79
  CLUS_3                            51                             102
  CLUS_4                            22                              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       66     67     41
  AMP PEAK 23(18P11.32) WILD-TYPE    136     82     94
D23V8, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            66                             136
  CLUS_2                            67                              82
  CLUS_3                            41                              94
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(18P11.32) MUTATED       53     58     29     27
  AMP PEAK 23(18P11.32) WILD-TYPE     92     72     96     37
D23V9, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            53                              92
  CLUS_2                            58                              72
  CLUS_3                            29                              96
  CLUS_4                            27                              37
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       32     57     78
  AMP PEAK 23(18P11.32) WILD-TYPE     42    136    119
D23V10, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            32                              42
  CLUS_2                            57                             136
  CLUS_3                            78                             119
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(18P11.32) MUTATED       56     28     31
  AMP PEAK 23(18P11.32) WILD-TYPE     69     84     60
D23V11, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            56                              69
  CLUS_2                            28                              84
  CLUS_3                            31                              60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 23(18P11.32) MUTATED       17      9      4     11     17     19
  AMP PEAK 23(18P11.32) WILD-TYPE     36     25     24     15     21     40
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 23(18P11.32) MUTATED       13      8     17
  AMP PEAK 23(18P11.32) WILD-TYPE     18     13     21
D23V12, multiclass
        clus
vv       AMP PEAK 23(18P11.32) MUTATED AMP PEAK 23(18P11.32) WILD-TYPE
  CLUS_1                            17                              36
  CLUS_2                             9                              25
  CLUS_3                             4                              24
  CLUS_4                            11                              15
  CLUS_5                            17                              21
  CLUS_6                            19                              40
  CLUS_7                            13                              18
  CLUS_8                             8                              13
  CLUS_9                            17                              21
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(24) Variable = AMP PEAK 24(18Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(18Q11.2) MUTATED        8     25      5     15
  AMP PEAK 24(18Q11.2) WILD-TYPE     34     27     27     13
D24V1, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                            8                             34
  CLUS_2                           25                             27
  CLUS_3                            5                             27
  CLUS_4                           15                             13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       10     27     16
  AMP PEAK 24(18Q11.2) WILD-TYPE     37     29     35
D24V2, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           10                             37
  CLUS_2                           27                             29
  CLUS_3                           16                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       33     76     39
  AMP PEAK 24(18Q11.2) WILD-TYPE    160     86     96
D24V3, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           33                            160
  CLUS_2                           76                             86
  CLUS_3                           39                             96
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       24     49     31
  AMP PEAK 24(18Q11.2) WILD-TYPE    118     65     69
D24V4, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           24                            118
  CLUS_2                           49                             65
  CLUS_3                           31                             69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       24     22     16
  AMP PEAK 24(18Q11.2) WILD-TYPE     36     51     45
D24V5, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           24                             36
  CLUS_2                           22                             51
  CLUS_3                           16                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(18Q11.2) MUTATED       20     13     14     15
  AMP PEAK 24(18Q11.2) WILD-TYPE     34     28     38     32
D24V6, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           20                             34
  CLUS_2                           13                             28
  CLUS_3                           14                             38
  CLUS_4                           15                             32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(18Q11.2) MUTATED       25     63     50      9
  AMP PEAK 24(18Q11.2) WILD-TYPE     85     82    103     69
D24V7, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           25                             85
  CLUS_2                           63                             82
  CLUS_3                           50                            103
  CLUS_4                            9                             69
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       46     64     37
  AMP PEAK 24(18Q11.2) WILD-TYPE    156     85     98
D24V8, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           46                            156
  CLUS_2                           64                             85
  CLUS_3                           37                             98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(18Q11.2) MUTATED       48     45     21     26
  AMP PEAK 24(18Q11.2) WILD-TYPE     97     85    104     38
D24V9, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           48                             97
  CLUS_2                           45                             85
  CLUS_3                           21                            104
  CLUS_4                           26                             38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       33     45     62
  AMP PEAK 24(18Q11.2) WILD-TYPE     41    148    135
D24V10, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           33                             41
  CLUS_2                           45                            148
  CLUS_3                           62                            135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(18Q11.2) MUTATED       49     17     25
  AMP PEAK 24(18Q11.2) WILD-TYPE     76     95     66
D24V11, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           49                             76
  CLUS_2                           17                             95
  CLUS_3                           25                             66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 24(18Q11.2) MUTATED       13      4      4      6     15     15
  AMP PEAK 24(18Q11.2) WILD-TYPE     40     30     24     20     23     44
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 24(18Q11.2) MUTATED       16      6     12
  AMP PEAK 24(18Q11.2) WILD-TYPE     15     15     26
D24V12, multiclass
        clus
vv       AMP PEAK 24(18Q11.2) MUTATED AMP PEAK 24(18Q11.2) WILD-TYPE
  CLUS_1                           13                             40
  CLUS_2                            4                             30
  CLUS_3                            4                             24
  CLUS_4                            6                             20
  CLUS_5                           15                             23
  CLUS_6                           15                             44
  CLUS_7                           16                             15
  CLUS_8                            6                             15
  CLUS_9                           12                             26
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(25) Variable = AMP PEAK 25(19Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(19Q12) MUTATED       16     27     11     13
  AMP PEAK 25(19Q12) WILD-TYPE     26     25     21     15
D25V1, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         16                           26
  CLUS_2                         27                           25
  CLUS_3                         11                           21
  CLUS_4                         13                           15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19Q12) MUTATED       20     27     20
  AMP PEAK 25(19Q12) WILD-TYPE     27     29     31
D25V2, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         20                           27
  CLUS_2                         27                           29
  CLUS_3                         20                           31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19Q12) MUTATED       57    107     54
  AMP PEAK 25(19Q12) WILD-TYPE    136     55     81
D25V3, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         57                          136
  CLUS_2                        107                           55
  CLUS_3                         54                           81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19Q12) MUTATED       54     68     42
  AMP PEAK 25(19Q12) WILD-TYPE     88     46     58
D25V4, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         54                           88
  CLUS_2                         68                           46
  CLUS_3                         42                           58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19Q12) MUTATED       32     28     28
  AMP PEAK 25(19Q12) WILD-TYPE     28     45     33
D25V5, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         32                           28
  CLUS_2                         28                           45
  CLUS_3                         28                           33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(19Q12) MUTATED       28     14     23     23
  AMP PEAK 25(19Q12) WILD-TYPE     26     27     29     24
D25V6, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         28                           26
  CLUS_2                         14                           27
  CLUS_3                         23                           29
  CLUS_4                         23                           24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(19Q12) MUTATED       36     80     71     29
  AMP PEAK 25(19Q12) WILD-TYPE     74     65     82     49
D25V7, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         36                           74
  CLUS_2                         80                           65
  CLUS_3                         71                           82
  CLUS_4                         29                           49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19Q12) MUTATED       73     82     61
  AMP PEAK 25(19Q12) WILD-TYPE    129     67     74
D25V8, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         73                          129
  CLUS_2                         82                           67
  CLUS_3                         61                           74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(19Q12) MUTATED       68     60     47     35
  AMP PEAK 25(19Q12) WILD-TYPE     77     70     78     29
D25V9, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         68                           77
  CLUS_2                         60                           70
  CLUS_3                         47                           78
  CLUS_4                         35                           29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19Q12) MUTATED       37     84     89
  AMP PEAK 25(19Q12) WILD-TYPE     37    109    108
D25V10, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         37                           37
  CLUS_2                         84                          109
  CLUS_3                         89                          108
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(19Q12) MUTATED       68     42     37
  AMP PEAK 25(19Q12) WILD-TYPE     57     70     54
D25V11, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         68                           57
  CLUS_2                         42                           70
  CLUS_3                         37                           54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 25(19Q12) MUTATED       28     14      8     11     17     19     20
  AMP PEAK 25(19Q12) WILD-TYPE     25     20     20     15     21     40     11
                              vv
clus                           CLUS_8 CLUS_9
  AMP PEAK 25(19Q12) MUTATED       10     20
  AMP PEAK 25(19Q12) WILD-TYPE     11     18
D25V12, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         28                           25
  CLUS_2                         14                           20
  CLUS_3                          8                           20
  CLUS_4                         11                           15
  CLUS_5                         17                           21
  CLUS_6                         19                           40
  CLUS_7                         20                           11
  CLUS_8                         10                           11
  CLUS_9                         20                           18
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(26) Variable = AMP PEAK 26(19Q13.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(19Q13.2) MUTATED       21     28     11     12
  AMP PEAK 26(19Q13.2) WILD-TYPE     21     24     21     16
D26V1, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           21                             21
  CLUS_2                           28                             24
  CLUS_3                           11                             21
  CLUS_4                           12                             16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q13.2) MUTATED       24     29     19
  AMP PEAK 26(19Q13.2) WILD-TYPE     23     27     32
D26V2, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           24                             23
  CLUS_2                           29                             27
  CLUS_3                           19                             32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q13.2) MUTATED       64    107     58
  AMP PEAK 26(19Q13.2) WILD-TYPE    129     55     77
D26V3, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           64                            129
  CLUS_2                          107                             55
  CLUS_3                           58                             77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q13.2) MUTATED       57     69     43
  AMP PEAK 26(19Q13.2) WILD-TYPE     85     45     57
D26V4, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           57                             85
  CLUS_2                           69                             45
  CLUS_3                           43                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q13.2) MUTATED       32     30     28
  AMP PEAK 26(19Q13.2) WILD-TYPE     28     43     33
D26V5, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           32                             28
  CLUS_2                           30                             43
  CLUS_3                           28                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(19Q13.2) MUTATED       27     16     22     25
  AMP PEAK 26(19Q13.2) WILD-TYPE     27     25     30     22
D26V6, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           27                             27
  CLUS_2                           16                             25
  CLUS_3                           22                             30
  CLUS_4                           25                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(19Q13.2) MUTATED       38     83     73     32
  AMP PEAK 26(19Q13.2) WILD-TYPE     72     62     80     46
D26V7, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           38                             72
  CLUS_2                           83                             62
  CLUS_3                           73                             80
  CLUS_4                           32                             46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q13.2) MUTATED       77     84     65
  AMP PEAK 26(19Q13.2) WILD-TYPE    125     65     70
D26V8, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           77                            125
  CLUS_2                           84                             65
  CLUS_3                           65                             70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(19Q13.2) MUTATED       70     63     53     36
  AMP PEAK 26(19Q13.2) WILD-TYPE     75     67     72     28
D26V9, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           70                             75
  CLUS_2                           63                             67
  CLUS_3                           53                             72
  CLUS_4                           36                             28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q13.2) MUTATED       39     86     97
  AMP PEAK 26(19Q13.2) WILD-TYPE     35    107    100
D26V10, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           39                             35
  CLUS_2                           86                            107
  CLUS_3                           97                            100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(19Q13.2) MUTATED       69     45     41
  AMP PEAK 26(19Q13.2) WILD-TYPE     56     67     50
D26V11, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           69                             56
  CLUS_2                           45                             67
  CLUS_3                           41                             50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 26(19Q13.2) MUTATED       29     16     10     11     18     23
  AMP PEAK 26(19Q13.2) WILD-TYPE     24     18     18     15     20     36
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 26(19Q13.2) MUTATED       19     10     19
  AMP PEAK 26(19Q13.2) WILD-TYPE     12     11     19
D26V12, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           29                             24
  CLUS_2                           16                             18
  CLUS_3                           10                             18
  CLUS_4                           11                             15
  CLUS_5                           18                             20
  CLUS_6                           23                             36
  CLUS_7                           19                             12
  CLUS_8                           10                             11
  CLUS_9                           19                             19
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(27) Variable = AMP PEAK 27(20P12.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(20P12.2) MUTATED       23     37      9     12
  AMP PEAK 27(20P12.2) WILD-TYPE     19     15     23     16
D27V1, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           23                             19
  CLUS_2                           37                             15
  CLUS_3                            9                             23
  CLUS_4                           12                             16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       27     37     17
  AMP PEAK 27(20P12.2) WILD-TYPE     20     19     34
D27V2, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           27                             20
  CLUS_2                           37                             19
  CLUS_3                           17                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       76    119     78
  AMP PEAK 27(20P12.2) WILD-TYPE    117     43     57
D27V3, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           76                            117
  CLUS_2                          119                             43
  CLUS_3                           78                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       67     82     54
  AMP PEAK 27(20P12.2) WILD-TYPE     75     32     46
D27V4, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           67                             75
  CLUS_2                           82                             32
  CLUS_3                           54                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       31     40     34
  AMP PEAK 27(20P12.2) WILD-TYPE     29     33     27
D27V5, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           31                             29
  CLUS_2                           40                             33
  CLUS_3                           34                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(20P12.2) MUTATED       26     19     32     28
  AMP PEAK 27(20P12.2) WILD-TYPE     28     22     20     19
D27V6, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           26                             28
  CLUS_2                           19                             22
  CLUS_3                           32                             20
  CLUS_4                           28                             19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(20P12.2) MUTATED       53     99     80     40
  AMP PEAK 27(20P12.2) WILD-TYPE     57     46     73     38
D27V7, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           53                             57
  CLUS_2                           99                             46
  CLUS_3                           80                             73
  CLUS_4                           40                             38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED      104    100     68
  AMP PEAK 27(20P12.2) WILD-TYPE     98     49     67
D27V8, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                          104                             98
  CLUS_2                          100                             49
  CLUS_3                           68                             67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(20P12.2) MUTATED       66     83     68     41
  AMP PEAK 27(20P12.2) WILD-TYPE     79     47     57     23
D27V9, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           66                             79
  CLUS_2                           83                             47
  CLUS_3                           68                             57
  CLUS_4                           41                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       47    102    109
  AMP PEAK 27(20P12.2) WILD-TYPE     27     91     88
D27V10, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           47                             27
  CLUS_2                          102                             91
  CLUS_3                          109                             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(20P12.2) MUTATED       82     63     44
  AMP PEAK 27(20P12.2) WILD-TYPE     43     49     47
D27V11, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           82                             43
  CLUS_2                           63                             49
  CLUS_3                           44                             47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 27(20P12.2) MUTATED       32     19     13     14     20     34
  AMP PEAK 27(20P12.2) WILD-TYPE     21     15     15     12     18     25
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 27(20P12.2) MUTATED       23     10     24
  AMP PEAK 27(20P12.2) WILD-TYPE      8     11     14
D27V12, multiclass
        clus
vv       AMP PEAK 27(20P12.2) MUTATED AMP PEAK 27(20P12.2) WILD-TYPE
  CLUS_1                           32                             21
  CLUS_2                           19                             15
  CLUS_3                           13                             15
  CLUS_4                           14                             12
  CLUS_5                           20                             18
  CLUS_6                           34                             25
  CLUS_7                           23                              8
  CLUS_8                           10                             11
  CLUS_9                           24                             14
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(28) Variable = AMP PEAK 28(20Q11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(20Q11.21) MUTATED       26     30     17     18
  AMP PEAK 28(20Q11.21) WILD-TYPE     16     22     15     10
D28V1, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            26                              16
  CLUS_2                            30                              22
  CLUS_3                            17                              15
  CLUS_4                            18                              10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.21) MUTATED       31     31     29
  AMP PEAK 28(20Q11.21) WILD-TYPE     16     25     22
D28V2, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            31                              16
  CLUS_2                            31                              25
  CLUS_3                            29                              22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.21) MUTATED       89    110     99
  AMP PEAK 28(20Q11.21) WILD-TYPE    104     52     36
D28V3, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            89                             104
  CLUS_2                           110                              52
  CLUS_3                            99                              36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.21) MUTATED       73     81     63
  AMP PEAK 28(20Q11.21) WILD-TYPE     69     33     37
D28V4, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            73                              69
  CLUS_2                            81                              33
  CLUS_3                            63                              37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.21) MUTATED       35     45     34
  AMP PEAK 28(20Q11.21) WILD-TYPE     25     28     27
D28V5, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            35                              25
  CLUS_2                            45                              28
  CLUS_3                            34                              27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(20Q11.21) MUTATED       32     21     32     29
  AMP PEAK 28(20Q11.21) WILD-TYPE     22     20     20     18
D28V6, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            32                              22
  CLUS_2                            21                              20
  CLUS_3                            32                              20
  CLUS_4                            29                              18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(20Q11.21) MUTATED       62     90     98     45
  AMP PEAK 28(20Q11.21) WILD-TYPE     48     55     55     33
D28V7, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            62                              48
  CLUS_2                            90                              55
  CLUS_3                            98                              55
  CLUS_4                            45                              33
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.21) MUTATED      121     91     83
  AMP PEAK 28(20Q11.21) WILD-TYPE     81     58     52
D28V8, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                           121                              81
  CLUS_2                            91                              58
  CLUS_3                            83                              52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(20Q11.21) MUTATED       81     90     75     37
  AMP PEAK 28(20Q11.21) WILD-TYPE     64     40     50     27
D28V9, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            81                              64
  CLUS_2                            90                              40
  CLUS_3                            75                              50
  CLUS_4                            37                              27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.21) MUTATED       43    113    127
  AMP PEAK 28(20Q11.21) WILD-TYPE     31     80     70
D28V10, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            43                              31
  CLUS_2                           113                              80
  CLUS_3                           127                              70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(20Q11.21) MUTATED       85     70     47
  AMP PEAK 28(20Q11.21) WILD-TYPE     40     42     44
D28V11, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            85                              40
  CLUS_2                            70                              42
  CLUS_3                            47                              44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 28(20Q11.21) MUTATED       37     23     13     16     20     35
  AMP PEAK 28(20Q11.21) WILD-TYPE     16     11     15     10     18     24
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 28(20Q11.21) MUTATED       21     12     25
  AMP PEAK 28(20Q11.21) WILD-TYPE     10      9     13
D28V12, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            37                              16
  CLUS_2                            23                              11
  CLUS_3                            13                              15
  CLUS_4                            16                              10
  CLUS_5                            20                              18
  CLUS_6                            35                              24
  CLUS_7                            21                              10
  CLUS_8                            12                               9
  CLUS_9                            25                              13
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(29) Variable = AMP PEAK 29(22Q11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(22Q11.21) MUTATED       23     31     11     12
  AMP PEAK 29(22Q11.21) WILD-TYPE     19     21     21     16
D29V1, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            23                              19
  CLUS_2                            31                              21
  CLUS_3                            11                              21
  CLUS_4                            12                              16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(22Q11.21) MUTATED       25     32     20
  AMP PEAK 29(22Q11.21) WILD-TYPE     22     24     31
D29V2, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            25                              22
  CLUS_2                            32                              24
  CLUS_3                            20                              31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(22Q11.21) MUTATED       77     98     78
  AMP PEAK 29(22Q11.21) WILD-TYPE    116     64     57
D29V3, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            77                             116
  CLUS_2                            98                              64
  CLUS_3                            78                              57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(22Q11.21) MUTATED       59     73     57
  AMP PEAK 29(22Q11.21) WILD-TYPE     83     41     43
D29V4, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            59                              83
  CLUS_2                            73                              41
  CLUS_3                            57                              43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(22Q11.21) MUTATED       30     40     31
  AMP PEAK 29(22Q11.21) WILD-TYPE     30     33     30
D29V5, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            30                              30
  CLUS_2                            40                              33
  CLUS_3                            31                              30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(22Q11.21) MUTATED       24     23     28     26
  AMP PEAK 29(22Q11.21) WILD-TYPE     30     18     24     21
D29V6, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            24                              30
  CLUS_2                            23                              18
  CLUS_3                            28                              24
  CLUS_4                            26                              21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(22Q11.21) MUTATED       53     97     71     30
  AMP PEAK 29(22Q11.21) WILD-TYPE     57     48     82     48
D29V7, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            53                              57
  CLUS_2                            97                              48
  CLUS_3                            71                              82
  CLUS_4                            30                              48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(22Q11.21) MUTATED      110     91     50
  AMP PEAK 29(22Q11.21) WILD-TYPE     92     58     85
D29V8, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                           110                              92
  CLUS_2                            91                              58
  CLUS_3                            50                              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(22Q11.21) MUTATED       68     81     59     33
  AMP PEAK 29(22Q11.21) WILD-TYPE     77     49     66     31
D29V9, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            68                              77
  CLUS_2                            81                              49
  CLUS_3                            59                              66
  CLUS_4                            33                              31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(22Q11.21) MUTATED       38     88    115
  AMP PEAK 29(22Q11.21) WILD-TYPE     36    105     82
D29V10, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            38                              36
  CLUS_2                            88                             105
  CLUS_3                           115                              82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(22Q11.21) MUTATED       73     63     34
  AMP PEAK 29(22Q11.21) WILD-TYPE     52     49     57
D29V11, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            73                              52
  CLUS_2                            63                              49
  CLUS_3                            34                              57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 29(22Q11.21) MUTATED       25     19     10     13     15     28
  AMP PEAK 29(22Q11.21) WILD-TYPE     28     15     18     13     23     31
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  AMP PEAK 29(22Q11.21) MUTATED       18     14     28
  AMP PEAK 29(22Q11.21) WILD-TYPE     13      7     10
D29V12, multiclass
        clus
vv       AMP PEAK 29(22Q11.21) MUTATED AMP PEAK 29(22Q11.21) WILD-TYPE
  CLUS_1                            25                              28
  CLUS_2                            19                              15
  CLUS_3                            10                              18
  CLUS_4                            13                              13
  CLUS_5                            15                              23
  CLUS_6                            28                              31
  CLUS_7                            18                              13
  CLUS_8                            14                               7
  CLUS_9                            28                              10
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(30) Variable = AMP PEAK 30(XQ28) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(XQ28) MUTATED       10     15      7      8
  AMP PEAK 30(XQ28) WILD-TYPE     32     37     25     20
D30V1, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        10                          32
  CLUS_2                        15                          37
  CLUS_3                         7                          25
  CLUS_4                         8                          20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(XQ28) MUTATED       12     16     12
  AMP PEAK 30(XQ28) WILD-TYPE     35     40     39
D30V2, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        12                          35
  CLUS_2                        16                          40
  CLUS_3                        12                          39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(XQ28) MUTATED       37     52     33
  AMP PEAK 30(XQ28) WILD-TYPE    156    110    102
D30V3, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        37                         156
  CLUS_2                        52                         110
  CLUS_3                        33                         102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(XQ28) MUTATED       27     37     24
  AMP PEAK 30(XQ28) WILD-TYPE    115     77     76
D30V4, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        27                         115
  CLUS_2                        37                          77
  CLUS_3                        24                          76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(XQ28) MUTATED       14     26     10
  AMP PEAK 30(XQ28) WILD-TYPE     46     47     51
D30V5, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        14                          46
  CLUS_2                        26                          47
  CLUS_3                        10                          51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(XQ28) MUTATED       11     11     20      8
  AMP PEAK 30(XQ28) WILD-TYPE     43     30     32     39
D30V6, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        11                          43
  CLUS_2                        11                          30
  CLUS_3                        20                          32
  CLUS_4                         8                          39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(XQ28) MUTATED       20     46     35     18
  AMP PEAK 30(XQ28) WILD-TYPE     90     99    118     60
D30V7, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        20                          90
  CLUS_2                        46                          99
  CLUS_3                        35                         118
  CLUS_4                        18                          60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(XQ28) MUTATED       38     46     35
  AMP PEAK 30(XQ28) WILD-TYPE    164    103    100
D30V8, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        38                         164
  CLUS_2                        46                         103
  CLUS_3                        35                         100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(XQ28) MUTATED       36     44     19     18
  AMP PEAK 30(XQ28) WILD-TYPE    109     86    106     46
D30V9, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        36                         109
  CLUS_2                        44                          86
  CLUS_3                        19                         106
  CLUS_4                        18                          46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(XQ28) MUTATED       24     42     51
  AMP PEAK 30(XQ28) WILD-TYPE     50    151    146
D30V10, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        24                          50
  CLUS_2                        42                         151
  CLUS_3                        51                         146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(XQ28) MUTATED       39     21     21
  AMP PEAK 30(XQ28) WILD-TYPE     86     91     70
D30V11, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        39                          86
  CLUS_2                        21                          91
  CLUS_3                        21                          70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 30(XQ28) MUTATED       12     10      2      7      8     16     11
  AMP PEAK 30(XQ28) WILD-TYPE     41     24     26     19     30     43     20
                             vv
clus                          CLUS_8 CLUS_9
  AMP PEAK 30(XQ28) MUTATED        2     13
  AMP PEAK 30(XQ28) WILD-TYPE     19     25
D30V12, multiclass
        clus
vv       AMP PEAK 30(XQ28) MUTATED AMP PEAK 30(XQ28) WILD-TYPE
  CLUS_1                        12                          41
  CLUS_2                        10                          24
  CLUS_3                         2                          26
  CLUS_4                         7                          19
  CLUS_5                         8                          30
  CLUS_6                        16                          43
  CLUS_7                        11                          20
  CLUS_8                         2                          19
  CLUS_9                        13                          25
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(31) Variable = DEL PEAK  1(1P36.32) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.32) MUTATED        9     39     14      8
  DEL PEAK  1(1P36.32) WILD-TYPE     33     13     18     20
D31V1, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                            9                             33
  CLUS_2                           39                             13
  CLUS_3                           14                             18
  CLUS_4                            8                             20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       11     43     16
  DEL PEAK  1(1P36.32) WILD-TYPE     36     13     35
D31V2, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           11                             36
  CLUS_2                           43                             13
  CLUS_3                           16                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       51    134     28
  DEL PEAK  1(1P36.32) WILD-TYPE    142     28    107
D31V3, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           51                            142
  CLUS_2                          134                             28
  CLUS_3                           28                            107
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       26     85     38
  DEL PEAK  1(1P36.32) WILD-TYPE    116     29     62
D31V4, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           26                            116
  CLUS_2                           85                             29
  CLUS_3                           38                             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       29     27     28
  DEL PEAK  1(1P36.32) WILD-TYPE     31     46     33
D31V5, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           29                             31
  CLUS_2                           27                             46
  CLUS_3                           28                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.32) MUTATED       21     17     16     30
  DEL PEAK  1(1P36.32) WILD-TYPE     33     24     36     17
D31V6, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           21                             33
  CLUS_2                           17                             24
  CLUS_3                           16                             36
  CLUS_4                           30                             17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.32) MUTATED       31    112     45     24
  DEL PEAK  1(1P36.32) WILD-TYPE     79     33    108     54
D31V7, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           31                             79
  CLUS_2                          112                             33
  CLUS_3                           45                            108
  CLUS_4                           24                             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       60    113     39
  DEL PEAK  1(1P36.32) WILD-TYPE    142     36     96
D31V8, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           60                            142
  CLUS_2                          113                             36
  CLUS_3                           39                             96
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.32) MUTATED       60     62     35     44
  DEL PEAK  1(1P36.32) WILD-TYPE     85     68     90     20
D31V9, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           60                             85
  CLUS_2                           62                             68
  CLUS_3                           35                             90
  CLUS_4                           44                             20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       53     72     76
  DEL PEAK  1(1P36.32) WILD-TYPE     21    121    121
D31V10, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           53                             21
  CLUS_2                           72                            121
  CLUS_3                           76                            121
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       67     35     36
  DEL PEAK  1(1P36.32) WILD-TYPE     58     77     55
D31V11, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           67                             58
  CLUS_2                           35                             77
  CLUS_3                           36                             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  1(1P36.32) MUTATED       23      6      5     10     13     21
  DEL PEAK  1(1P36.32) WILD-TYPE     30     28     23     16     25     38
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK  1(1P36.32) MUTATED       24     10     26
  DEL PEAK  1(1P36.32) WILD-TYPE      7     11     12
D31V12, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           23                             30
  CLUS_2                            6                             28
  CLUS_3                            5                             23
  CLUS_4                           10                             16
  CLUS_5                           13                             25
  CLUS_6                           21                             38
  CLUS_7                           24                              7
  CLUS_8                           10                             11
  CLUS_9                           26                             12
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(32) Variable = DEL PEAK  2(1P13.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.1) MUTATED       17     37      9      9
  DEL PEAK  2(1P13.1) WILD-TYPE     25     15     23     19
D32V1, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          17                            25
  CLUS_2                          37                            15
  CLUS_3                           9                            23
  CLUS_4                           9                            19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       19     39     14
  DEL PEAK  2(1P13.1) WILD-TYPE     28     17     37
D32V2, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          19                            28
  CLUS_2                          39                            17
  CLUS_3                          14                            37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       52    119     41
  DEL PEAK  2(1P13.1) WILD-TYPE    141     43     94
D32V3, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          52                           141
  CLUS_2                         119                            43
  CLUS_3                          41                            94
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       36     78     34
  DEL PEAK  2(1P13.1) WILD-TYPE    106     36     66
D32V4, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          36                           106
  CLUS_2                          78                            36
  CLUS_3                          34                            66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       34     26     24
  DEL PEAK  2(1P13.1) WILD-TYPE     26     47     37
D32V5, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          34                            26
  CLUS_2                          26                            47
  CLUS_3                          24                            37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.1) MUTATED       24     15     19     26
  DEL PEAK  2(1P13.1) WILD-TYPE     30     26     33     21
D32V6, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          24                            30
  CLUS_2                          15                            26
  CLUS_3                          19                            33
  CLUS_4                          26                            21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.1) MUTATED       34    100     53     24
  DEL PEAK  2(1P13.1) WILD-TYPE     76     45    100     54
D32V7, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          34                            76
  CLUS_2                         100                            45
  CLUS_3                          53                           100
  CLUS_4                          24                            54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       60    102     49
  DEL PEAK  2(1P13.1) WILD-TYPE    142     47     86
D32V8, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          60                           142
  CLUS_2                         102                            47
  CLUS_3                          49                            86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.1) MUTATED       66     61     30     44
  DEL PEAK  2(1P13.1) WILD-TYPE     79     69     95     20
D32V9, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          66                            79
  CLUS_2                          61                            69
  CLUS_3                          30                            95
  CLUS_4                          44                            20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       55     67     79
  DEL PEAK  2(1P13.1) WILD-TYPE     19    126    118
D32V10, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          55                            19
  CLUS_2                          67                           126
  CLUS_3                          79                           118
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.1) MUTATED       65     38     33
  DEL PEAK  2(1P13.1) WILD-TYPE     60     74     58
D32V11, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          65                            60
  CLUS_2                          38                            74
  CLUS_3                          33                            58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  2(1P13.1) MUTATED       26      8      3      8     19     22
  DEL PEAK  2(1P13.1) WILD-TYPE     27     26     25     18     19     37
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK  2(1P13.1) MUTATED       22      9     19
  DEL PEAK  2(1P13.1) WILD-TYPE      9     12     19
D32V12, multiclass
        clus
vv       DEL PEAK  2(1P13.1) MUTATED DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                          26                            27
  CLUS_2                           8                            26
  CLUS_3                           3                            25
  CLUS_4                           8                            18
  CLUS_5                          19                            19
  CLUS_6                          22                            37
  CLUS_7                          22                             9
  CLUS_8                           9                            12
  CLUS_9                          19                            19
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(33) Variable = DEL PEAK  3(2P25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2P25.3) MUTATED        7      5      1      6
  DEL PEAK  3(2P25.3) WILD-TYPE     35     47     31     22
D33V1, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           7                            35
  CLUS_2                           5                            47
  CLUS_3                           1                            31
  CLUS_4                           6                            22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2P25.3) MUTATED        8      5      6
  DEL PEAK  3(2P25.3) WILD-TYPE     39     51     45
D33V2, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           8                            39
  CLUS_2                           5                            51
  CLUS_3                           6                            45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2P25.3) MUTATED       14     17     19
  DEL PEAK  3(2P25.3) WILD-TYPE    179    145    116
D33V3, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          14                           179
  CLUS_2                          17                           145
  CLUS_3                          19                           116
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2P25.3) MUTATED       11     11     13
  DEL PEAK  3(2P25.3) WILD-TYPE    131    103     87
D33V4, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          11                           131
  CLUS_2                          11                           103
  CLUS_3                          13                            87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2P25.3) MUTATED        8      7      3
  DEL PEAK  3(2P25.3) WILD-TYPE     52     66     58
D33V5, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           8                            52
  CLUS_2                           7                            66
  CLUS_3                           3                            58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2P25.3) MUTATED        6      1      6      5
  DEL PEAK  3(2P25.3) WILD-TYPE     48     40     46     42
D33V6, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           6                            48
  CLUS_2                           1                            40
  CLUS_3                           6                            46
  CLUS_4                           5                            42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2P25.3) MUTATED       10     13     21      6
  DEL PEAK  3(2P25.3) WILD-TYPE    100    132    132     72
D33V7, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          10                           100
  CLUS_2                          13                           132
  CLUS_3                          21                           132
  CLUS_4                           6                            72
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2P25.3) MUTATED       18     15     17
  DEL PEAK  3(2P25.3) WILD-TYPE    184    134    118
D33V8, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          18                           184
  CLUS_2                          15                           134
  CLUS_3                          17                           118
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2P25.3) MUTATED       21     16      5      6
  DEL PEAK  3(2P25.3) WILD-TYPE    124    114    120     58
D33V9, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          21                           124
  CLUS_2                          16                           114
  CLUS_3                           5                           120
  CLUS_4                           6                            58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2P25.3) MUTATED        6     17     25
  DEL PEAK  3(2P25.3) WILD-TYPE     68    176    172
D33V10, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           6                            68
  CLUS_2                          17                           176
  CLUS_3                          25                           172
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2P25.3) MUTATED       17      6      6
  DEL PEAK  3(2P25.3) WILD-TYPE    108    106     85
D33V11, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          17                           108
  CLUS_2                           6                           106
  CLUS_3                           6                            85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  3(2P25.3) MUTATED        5      2      0      1      6      4
  DEL PEAK  3(2P25.3) WILD-TYPE     48     32     28     25     32     55
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK  3(2P25.3) MUTATED        2      3      6
  DEL PEAK  3(2P25.3) WILD-TYPE     29     18     32
D33V12, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           5                            48
  CLUS_2                           2                            32
  CLUS_3                           0                            28
  CLUS_4                           1                            25
  CLUS_5                           6                            32
  CLUS_6                           4                            55
  CLUS_7                           2                            29
  CLUS_8                           3                            18
  CLUS_9                           6                            32
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(34) Variable = DEL PEAK  4(2Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED       10     18      6     10
  DEL PEAK  4(2Q22.1) WILD-TYPE     32     34     26     18
D34V1, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          10                            32
  CLUS_2                          18                            34
  CLUS_3                           6                            26
  CLUS_4                          10                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       12     20     12
  DEL PEAK  4(2Q22.1) WILD-TYPE     35     36     39
D34V2, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          12                            35
  CLUS_2                          20                            36
  CLUS_3                          12                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       25     61     38
  DEL PEAK  4(2Q22.1) WILD-TYPE    168    101     97
D34V3, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          25                           168
  CLUS_2                          61                           101
  CLUS_3                          38                            97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       19     39     27
  DEL PEAK  4(2Q22.1) WILD-TYPE    123     75     73
D34V4, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          19                           123
  CLUS_2                          39                            75
  CLUS_3                          27                            73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       14     19     10
  DEL PEAK  4(2Q22.1) WILD-TYPE     46     54     51
D34V5, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          14                            46
  CLUS_2                          19                            54
  CLUS_3                          10                            51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED       11      6     15     11
  DEL PEAK  4(2Q22.1) WILD-TYPE     43     35     37     36
D34V6, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          11                            43
  CLUS_2                           6                            35
  CLUS_3                          15                            37
  CLUS_4                          11                            36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED       23     46     46      9
  DEL PEAK  4(2Q22.1) WILD-TYPE     87     99    107     69
D34V7, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          23                            87
  CLUS_2                          46                            99
  CLUS_3                          46                           107
  CLUS_4                           9                            69
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       39     47     38
  DEL PEAK  4(2Q22.1) WILD-TYPE    163    102     97
D34V8, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          39                           163
  CLUS_2                          47                           102
  CLUS_3                          38                            97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED       48     35     15     22
  DEL PEAK  4(2Q22.1) WILD-TYPE     97     95    110     42
D34V9, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          48                            97
  CLUS_2                          35                            95
  CLUS_3                          15                           110
  CLUS_4                          22                            42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       28     47     45
  DEL PEAK  4(2Q22.1) WILD-TYPE     46    146    152
D34V10, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          28                            46
  CLUS_2                          47                           146
  CLUS_3                          45                           152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       46     21     13
  DEL PEAK  4(2Q22.1) WILD-TYPE     79     91     78
D34V11, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          46                            79
  CLUS_2                          21                            91
  CLUS_3                          13                            78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  4(2Q22.1) MUTATED       15      6      1      6     13     10
  DEL PEAK  4(2Q22.1) WILD-TYPE     38     28     27     20     25     49
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK  4(2Q22.1) MUTATED       14      7      8
  DEL PEAK  4(2Q22.1) WILD-TYPE     17     14     30
D34V12, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          15                            38
  CLUS_2                           6                            28
  CLUS_3                           1                            27
  CLUS_4                           6                            20
  CLUS_5                          13                            25
  CLUS_6                          10                            49
  CLUS_7                          14                            17
  CLUS_8                           7                            14
  CLUS_9                           8                            30
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(35) Variable = DEL PEAK  5(2Q37.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q37.1) MUTATED        7     26      7     10
  DEL PEAK  5(2Q37.1) WILD-TYPE     35     26     25     18
D35V1, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                           7                            35
  CLUS_2                          26                            26
  CLUS_3                           7                            25
  CLUS_4                          10                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       11     29     10
  DEL PEAK  5(2Q37.1) WILD-TYPE     36     27     41
D35V2, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          11                            36
  CLUS_2                          29                            27
  CLUS_3                          10                            41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       36     82     37
  DEL PEAK  5(2Q37.1) WILD-TYPE    157     80     98
D35V3, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          36                           157
  CLUS_2                          82                            80
  CLUS_3                          37                            98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       25     55     36
  DEL PEAK  5(2Q37.1) WILD-TYPE    117     59     64
D35V4, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          25                           117
  CLUS_2                          55                            59
  CLUS_3                          36                            64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       22     19     17
  DEL PEAK  5(2Q37.1) WILD-TYPE     38     54     44
D35V5, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          22                            38
  CLUS_2                          19                            54
  CLUS_3                          17                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q37.1) MUTATED       14     15     11     18
  DEL PEAK  5(2Q37.1) WILD-TYPE     40     26     41     29
D35V6, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          14                            40
  CLUS_2                          15                            26
  CLUS_3                          11                            41
  CLUS_4                          18                            29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q37.1) MUTATED       33     68     43     10
  DEL PEAK  5(2Q37.1) WILD-TYPE     77     77    110     68
D35V7, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          33                            77
  CLUS_2                          68                            77
  CLUS_3                          43                           110
  CLUS_4                          10                            68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       53     68     33
  DEL PEAK  5(2Q37.1) WILD-TYPE    149     81    102
D35V8, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          53                           149
  CLUS_2                          68                            81
  CLUS_3                          33                           102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q37.1) MUTATED       53     54     19     23
  DEL PEAK  5(2Q37.1) WILD-TYPE     92     76    106     41
D35V9, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          53                            92
  CLUS_2                          54                            76
  CLUS_3                          19                           106
  CLUS_4                          23                            41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       28     61     60
  DEL PEAK  5(2Q37.1) WILD-TYPE     46    132    137
D35V10, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          28                            46
  CLUS_2                          61                           132
  CLUS_3                          60                           137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q37.1) MUTATED       59     25     19
  DEL PEAK  5(2Q37.1) WILD-TYPE     66     87     72
D35V11, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          59                            66
  CLUS_2                          25                            87
  CLUS_3                          19                            72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  5(2Q37.1) MUTATED       23      2      2      6     15     15
  DEL PEAK  5(2Q37.1) WILD-TYPE     30     32     26     20     23     44
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK  5(2Q37.1) MUTATED       12     10     18
  DEL PEAK  5(2Q37.1) WILD-TYPE     19     11     20
D35V12, multiclass
        clus
vv       DEL PEAK  5(2Q37.1) MUTATED DEL PEAK  5(2Q37.1) WILD-TYPE
  CLUS_1                          23                            30
  CLUS_2                           2                            32
  CLUS_3                           2                            26
  CLUS_4                           6                            20
  CLUS_5                          15                            23
  CLUS_6                          15                            44
  CLUS_7                          12                            19
  CLUS_8                          10                            11
  CLUS_9                          18                            20
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(36) Variable = DEL PEAK  6(3P25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P25.3) MUTATED       31     45     24     23
  DEL PEAK  6(3P25.3) WILD-TYPE     11      7      8      5
D36V1, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          31                            11
  CLUS_2                          45                             7
  CLUS_3                          24                             8
  CLUS_4                          23                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED       36     49     38
  DEL PEAK  6(3P25.3) WILD-TYPE     11      7     13
D36V2, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          36                            11
  CLUS_2                          49                             7
  CLUS_3                          38                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED      144    141    104
  DEL PEAK  6(3P25.3) WILD-TYPE     49     21     31
D36V3, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                         144                            49
  CLUS_2                         141                            21
  CLUS_3                         104                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED       99    100     84
  DEL PEAK  6(3P25.3) WILD-TYPE     43     14     16
D36V4, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          99                            43
  CLUS_2                         100                            14
  CLUS_3                          84                            16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED       46     57     49
  DEL PEAK  6(3P25.3) WILD-TYPE     14     16     12
D36V5, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          46                            14
  CLUS_2                          57                            16
  CLUS_3                          49                            12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P25.3) MUTATED       41     28     43     40
  DEL PEAK  6(3P25.3) WILD-TYPE     13     13      9      7
D36V6, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          41                            13
  CLUS_2                          28                            13
  CLUS_3                          43                             9
  CLUS_4                          40                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P25.3) MUTATED       85    126    123     53
  DEL PEAK  6(3P25.3) WILD-TYPE     25     19     30     25
D36V7, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          85                            25
  CLUS_2                         126                            19
  CLUS_3                         123                            30
  CLUS_4                          53                            25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED      163    128     96
  DEL PEAK  6(3P25.3) WILD-TYPE     39     21     39
D36V8, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                         163                            39
  CLUS_2                         128                            21
  CLUS_3                          96                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P25.3) MUTATED      113    113     85     56
  DEL PEAK  6(3P25.3) WILD-TYPE     32     17     40      8
D36V9, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                         113                            32
  CLUS_2                         113                            17
  CLUS_3                          85                            40
  CLUS_4                          56                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED       63    138    166
  DEL PEAK  6(3P25.3) WILD-TYPE     11     55     31
D36V10, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          63                            11
  CLUS_2                         138                            55
  CLUS_3                         166                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P25.3) MUTATED      106     86     67
  DEL PEAK  6(3P25.3) WILD-TYPE     19     26     24
D36V11, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                         106                            19
  CLUS_2                          86                            26
  CLUS_3                          67                            24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  6(3P25.3) MUTATED       41     28     14     14     30     50
  DEL PEAK  6(3P25.3) WILD-TYPE     12      6     14     12      8      9
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK  6(3P25.3) MUTATED       29     19     34
  DEL PEAK  6(3P25.3) WILD-TYPE      2      2      4
D36V12, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          41                            12
  CLUS_2                          28                             6
  CLUS_3                          14                            14
  CLUS_4                          14                            12
  CLUS_5                          30                             8
  CLUS_6                          50                             9
  CLUS_7                          29                             2
  CLUS_8                          19                             2
  CLUS_9                          34                             4
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(37) Variable = DEL PEAK  7(3P13) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P13) MUTATED       38     46     24     25
  DEL PEAK  7(3P13) WILD-TYPE      4      6      8      3
D37V1, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        38                           4
  CLUS_2                        46                           6
  CLUS_3                        24                           8
  CLUS_4                        25                           3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED       42     50     41
  DEL PEAK  7(3P13) WILD-TYPE      5      6     10
D37V2, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        42                           5
  CLUS_2                        50                           6
  CLUS_3                        41                          10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED      146    153    125
  DEL PEAK  7(3P13) WILD-TYPE     47      9     10
D37V3, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                       146                          47
  CLUS_2                       153                           9
  CLUS_3                       125                          10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED      110    107     91
  DEL PEAK  7(3P13) WILD-TYPE     32      7      9
D37V4, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                       110                          32
  CLUS_2                       107                           7
  CLUS_3                        91                           9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED       53     63     51
  DEL PEAK  7(3P13) WILD-TYPE      7     10     10
D37V5, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        53                           7
  CLUS_2                        63                          10
  CLUS_3                        51                          10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P13) MUTATED       48     27     49     43
  DEL PEAK  7(3P13) WILD-TYPE      6     14      3      4
D37V6, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        48                           6
  CLUS_2                        27                          14
  CLUS_3                        49                           3
  CLUS_4                        43                           4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P13) MUTATED       98    133    133     57
  DEL PEAK  7(3P13) WILD-TYPE     12     12     20     21
D37V7, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        98                          12
  CLUS_2                       133                          12
  CLUS_3                       133                          20
  CLUS_4                        57                          21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED      179    136    106
  DEL PEAK  7(3P13) WILD-TYPE     23     13     29
D37V8, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                       179                          23
  CLUS_2                       136                          13
  CLUS_3                       106                          29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P13) MUTATED      129    120     92     60
  DEL PEAK  7(3P13) WILD-TYPE     16     10     33      4
D37V9, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                       129                          16
  CLUS_2                       120                          10
  CLUS_3                        92                          33
  CLUS_4                        60                           4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED       65    151    185
  DEL PEAK  7(3P13) WILD-TYPE      9     42     12
D37V10, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        65                           9
  CLUS_2                       151                          42
  CLUS_3                       185                          12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P13) MUTATED      118     95     71
  DEL PEAK  7(3P13) WILD-TYPE      7     17     20
D37V11, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                       118                           7
  CLUS_2                        95                          17
  CLUS_3                        71                          20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK  7(3P13) MUTATED       48     30     14     19     34     52     30
  DEL PEAK  7(3P13) WILD-TYPE      5      4     14      7      4      7      1
                             vv
clus                          CLUS_8 CLUS_9
  DEL PEAK  7(3P13) MUTATED       20     37
  DEL PEAK  7(3P13) WILD-TYPE      1      1
D37V12, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        48                           5
  CLUS_2                        30                           4
  CLUS_3                        14                          14
  CLUS_4                        19                           7
  CLUS_5                        34                           4
  CLUS_6                        52                           7
  CLUS_7                        30                           1
  CLUS_8                        20                           1
  CLUS_9                        37                           1
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(38) Variable = DEL PEAK  8(3P12.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P12.3) MUTATED       38     45     23     25
  DEL PEAK  8(3P12.3) WILD-TYPE      4      7      9      3
D38V1, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          38                             4
  CLUS_2                          45                             7
  CLUS_3                          23                             9
  CLUS_4                          25                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.3) MUTATED       42     49     40
  DEL PEAK  8(3P12.3) WILD-TYPE      5      7     11
D38V2, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          42                             5
  CLUS_2                          49                             7
  CLUS_3                          40                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.3) MUTATED      142    150    121
  DEL PEAK  8(3P12.3) WILD-TYPE     51     12     14
D38V3, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                         142                            51
  CLUS_2                         150                            12
  CLUS_3                         121                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.3) MUTATED      106    106     87
  DEL PEAK  8(3P12.3) WILD-TYPE     36      8     13
D38V4, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                         106                            36
  CLUS_2                         106                             8
  CLUS_3                          87                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.3) MUTATED       51     61     51
  DEL PEAK  8(3P12.3) WILD-TYPE      9     12     10
D38V5, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          51                             9
  CLUS_2                          61                            12
  CLUS_3                          51                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P12.3) MUTATED       45     27     49     42
  DEL PEAK  8(3P12.3) WILD-TYPE      9     14      3      5
D38V6, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          45                             9
  CLUS_2                          27                            14
  CLUS_3                          49                             3
  CLUS_4                          42                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P12.3) MUTATED       96    129    130     55
  DEL PEAK  8(3P12.3) WILD-TYPE     14     16     23     23
D38V7, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          96                            14
  CLUS_2                         129                            16
  CLUS_3                         130                            23
  CLUS_4                          55                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.3) MUTATED      174    132    104
  DEL PEAK  8(3P12.3) WILD-TYPE     28     17     31
D38V8, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                         174                            28
  CLUS_2                         132                            17
  CLUS_3                         104                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P12.3) MUTATED      125    115     90     60
  DEL PEAK  8(3P12.3) WILD-TYPE     20     15     35      4
D38V9, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                         125                            20
  CLUS_2                         115                            15
  CLUS_3                          90                            35
  CLUS_4                          60                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.3) MUTATED       65    148    177
  DEL PEAK  8(3P12.3) WILD-TYPE      9     45     20
D38V10, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          65                             9
  CLUS_2                         148                            45
  CLUS_3                         177                            20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P12.3) MUTATED      114     92     70
  DEL PEAK  8(3P12.3) WILD-TYPE     11     20     21
D38V11, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                         114                            11
  CLUS_2                          92                            20
  CLUS_3                          70                            21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  8(3P12.3) MUTATED       46     30     14     18     33     52
  DEL PEAK  8(3P12.3) WILD-TYPE      7      4     14      8      5      7
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK  8(3P12.3) MUTATED       30     19     34
  DEL PEAK  8(3P12.3) WILD-TYPE      1      2      4
D38V12, multiclass
        clus
vv       DEL PEAK  8(3P12.3) MUTATED DEL PEAK  8(3P12.3) WILD-TYPE
  CLUS_1                          46                             7
  CLUS_2                          30                             4
  CLUS_3                          14                            14
  CLUS_4                          18                             8
  CLUS_5                          33                             5
  CLUS_6                          52                             7
  CLUS_7                          30                             1
  CLUS_8                          19                             2
  CLUS_9                          34                             4
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(39) Variable = DEL PEAK  9(3Q11.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3Q11.1) MUTATED        6      6      6      5
  DEL PEAK  9(3Q11.1) WILD-TYPE     36     46     26     23
D39V1, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           6                            36
  CLUS_2                           6                            46
  CLUS_3                           6                            26
  CLUS_4                           5                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED        7      7      9
  DEL PEAK  9(3Q11.1) WILD-TYPE     40     49     42
D39V2, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           7                            40
  CLUS_2                           7                            49
  CLUS_3                           9                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED       33     29     15
  DEL PEAK  9(3Q11.1) WILD-TYPE    160    133    120
D39V3, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          33                           160
  CLUS_2                          29                           133
  CLUS_3                          15                           120
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED       22     19     15
  DEL PEAK  9(3Q11.1) WILD-TYPE    120     95     85
D39V4, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          22                           120
  CLUS_2                          19                            95
  CLUS_3                          15                            85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED        9      8      7
  DEL PEAK  9(3Q11.1) WILD-TYPE     51     65     54
D39V5, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           9                            51
  CLUS_2                           8                            65
  CLUS_3                           7                            54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3Q11.1) MUTATED        7      3      6      8
  DEL PEAK  9(3Q11.1) WILD-TYPE     47     38     46     39
D39V6, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           7                            47
  CLUS_2                           3                            38
  CLUS_3                           6                            46
  CLUS_4                           8                            39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3Q11.1) MUTATED       20     25     22     10
  DEL PEAK  9(3Q11.1) WILD-TYPE     90    120    131     68
D39V7, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          20                            90
  CLUS_2                          25                           120
  CLUS_3                          22                           131
  CLUS_4                          10                            68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED       32     24     21
  DEL PEAK  9(3Q11.1) WILD-TYPE    170    125    114
D39V8, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          32                           170
  CLUS_2                          24                           125
  CLUS_3                          21                           114
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3Q11.1) MUTATED       19     23     19     10
  DEL PEAK  9(3Q11.1) WILD-TYPE    126    107    106     54
D39V9, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          19                           126
  CLUS_2                          23                           107
  CLUS_3                          19                           106
  CLUS_4                          10                            54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED       13     25     33
  DEL PEAK  9(3Q11.1) WILD-TYPE     61    168    164
D39V10, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          13                            61
  CLUS_2                          25                           168
  CLUS_3                          33                           164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED       24     16     12
  DEL PEAK  9(3Q11.1) WILD-TYPE    101     96     79
D39V11, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          24                           101
  CLUS_2                          16                            96
  CLUS_3                          12                            79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  9(3Q11.1) MUTATED       10      4      2      6      5      9
  DEL PEAK  9(3Q11.1) WILD-TYPE     43     30     26     20     33     50
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK  9(3Q11.1) MUTATED        5      1     10
  DEL PEAK  9(3Q11.1) WILD-TYPE     26     20     28
D39V12, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          10                            43
  CLUS_2                           4                            30
  CLUS_3                           2                            26
  CLUS_4                           6                            20
  CLUS_5                           5                            33
  CLUS_6                           9                            50
  CLUS_7                           5                            26
  CLUS_8                           1                            20
  CLUS_9                          10                            28
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(40) Variable = DEL PEAK 10(4P15.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(4P15.2) MUTATED       31     41     12     13
  DEL PEAK 10(4P15.2) WILD-TYPE     11     11     20     15
D40V1, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          31                            11
  CLUS_2                          41                            11
  CLUS_3                          12                            20
  CLUS_4                          13                            15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4P15.2) MUTATED       34     44     19
  DEL PEAK 10(4P15.2) WILD-TYPE     13     12     32
D40V2, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          34                            13
  CLUS_2                          44                            12
  CLUS_3                          19                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4P15.2) MUTATED       93    131     83
  DEL PEAK 10(4P15.2) WILD-TYPE    100     31     52
D40V3, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          93                           100
  CLUS_2                         131                            31
  CLUS_3                          83                            52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4P15.2) MUTATED       66     87     69
  DEL PEAK 10(4P15.2) WILD-TYPE     76     27     31
D40V4, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          66                            76
  CLUS_2                          87                            27
  CLUS_3                          69                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4P15.2) MUTATED       43     50     40
  DEL PEAK 10(4P15.2) WILD-TYPE     17     23     21
D40V5, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          43                            17
  CLUS_2                          50                            23
  CLUS_3                          40                            21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(4P15.2) MUTATED       32     25     42     34
  DEL PEAK 10(4P15.2) WILD-TYPE     22     16     10     13
D40V6, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          32                            22
  CLUS_2                          25                            16
  CLUS_3                          42                            10
  CLUS_4                          34                            13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(4P15.2) MUTATED       72    110     82     42
  DEL PEAK 10(4P15.2) WILD-TYPE     38     35     71     36
D40V7, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          72                            38
  CLUS_2                         110                            35
  CLUS_3                          82                            71
  CLUS_4                          42                            36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4P15.2) MUTATED      130    112     64
  DEL PEAK 10(4P15.2) WILD-TYPE     72     37     71
D40V8, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                         130                            72
  CLUS_2                         112                            37
  CLUS_3                          64                            71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(4P15.2) MUTATED       99     91     61     43
  DEL PEAK 10(4P15.2) WILD-TYPE     46     39     64     21
D40V9, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          99                            46
  CLUS_2                          91                            39
  CLUS_3                          61                            64
  CLUS_4                          43                            21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4P15.2) MUTATED       49    118    127
  DEL PEAK 10(4P15.2) WILD-TYPE     25     75     70
D40V10, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          49                            25
  CLUS_2                         118                            75
  CLUS_3                         127                            70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(4P15.2) MUTATED       94     63     49
  DEL PEAK 10(4P15.2) WILD-TYPE     31     49     42
D40V11, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          94                            31
  CLUS_2                          63                            49
  CLUS_3                          49                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 10(4P15.2) MUTATED       40     17     10     15     24     31
  DEL PEAK 10(4P15.2) WILD-TYPE     13     17     18     11     14     28
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 10(4P15.2) MUTATED       22     18     29
  DEL PEAK 10(4P15.2) WILD-TYPE      9      3      9
D40V12, multiclass
        clus
vv       DEL PEAK 10(4P15.2) MUTATED DEL PEAK 10(4P15.2) WILD-TYPE
  CLUS_1                          40                            13
  CLUS_2                          17                            17
  CLUS_3                          10                            18
  CLUS_4                          15                            11
  CLUS_5                          24                            14
  CLUS_6                          31                            28
  CLUS_7                          22                             9
  CLUS_8                          18                             3
  CLUS_9                          29                             9
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(41) Variable = DEL PEAK 11(4Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4Q22.1) MUTATED       29     38     11     16
  DEL PEAK 11(4Q22.1) WILD-TYPE     13     14     21     12
D41V1, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          29                            13
  CLUS_2                          38                            14
  CLUS_3                          11                            21
  CLUS_4                          16                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q22.1) MUTATED       31     41     22
  DEL PEAK 11(4Q22.1) WILD-TYPE     16     15     29
D41V2, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          31                            16
  CLUS_2                          41                            15
  CLUS_3                          22                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q22.1) MUTATED       86    119     73
  DEL PEAK 11(4Q22.1) WILD-TYPE    107     43     62
D41V3, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          86                           107
  CLUS_2                         119                            43
  CLUS_3                          73                            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q22.1) MUTATED       64     77     54
  DEL PEAK 11(4Q22.1) WILD-TYPE     78     37     46
D41V4, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          64                            78
  CLUS_2                          77                            37
  CLUS_3                          54                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q22.1) MUTATED       42     38     37
  DEL PEAK 11(4Q22.1) WILD-TYPE     18     35     24
D41V5, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          42                            18
  CLUS_2                          38                            35
  CLUS_3                          37                            24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4Q22.1) MUTATED       37     23     29     28
  DEL PEAK 11(4Q22.1) WILD-TYPE     17     18     23     19
D41V6, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          37                            17
  CLUS_2                          23                            18
  CLUS_3                          29                            23
  CLUS_4                          28                            19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4Q22.1) MUTATED       60    102     82     32
  DEL PEAK 11(4Q22.1) WILD-TYPE     50     43     71     46
D41V7, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          60                            50
  CLUS_2                         102                            43
  CLUS_3                          82                            71
  CLUS_4                          32                            46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q22.1) MUTATED      110    100     66
  DEL PEAK 11(4Q22.1) WILD-TYPE     92     49     69
D41V8, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                         110                            92
  CLUS_2                         100                            49
  CLUS_3                          66                            69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4Q22.1) MUTATED       90     75     58     42
  DEL PEAK 11(4Q22.1) WILD-TYPE     55     55     67     22
D41V9, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          90                            55
  CLUS_2                          75                            55
  CLUS_3                          58                            67
  CLUS_4                          42                            22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q22.1) MUTATED       52     99    114
  DEL PEAK 11(4Q22.1) WILD-TYPE     22     94     83
D41V10, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          52                            22
  CLUS_2                          99                            94
  CLUS_3                         114                            83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4Q22.1) MUTATED       76     61     42
  DEL PEAK 11(4Q22.1) WILD-TYPE     49     51     49
D41V11, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          76                            49
  CLUS_2                          61                            51
  CLUS_3                          42                            49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 11(4Q22.1) MUTATED       34     19      8     13     21     25
  DEL PEAK 11(4Q22.1) WILD-TYPE     19     15     20     13     17     34
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 11(4Q22.1) MUTATED       23     15     21
  DEL PEAK 11(4Q22.1) WILD-TYPE      8      6     17
D41V12, multiclass
        clus
vv       DEL PEAK 11(4Q22.1) MUTATED DEL PEAK 11(4Q22.1) WILD-TYPE
  CLUS_1                          34                            19
  CLUS_2                          19                            15
  CLUS_3                           8                            20
  CLUS_4                          13                            13
  CLUS_5                          21                            17
  CLUS_6                          25                            34
  CLUS_7                          23                             8
  CLUS_8                          15                             6
  CLUS_9                          21                            17
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(42) Variable = DEL PEAK 12(4Q32.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q32.3) MUTATED       29     42     14     20
  DEL PEAK 12(4Q32.3) WILD-TYPE     13     10     18      8
D42V1, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          29                            13
  CLUS_2                          42                            10
  CLUS_3                          14                            18
  CLUS_4                          20                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q32.3) MUTATED       32     45     28
  DEL PEAK 12(4Q32.3) WILD-TYPE     15     11     23
D42V2, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          32                            15
  CLUS_2                          45                            11
  CLUS_3                          28                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q32.3) MUTATED      101    138     83
  DEL PEAK 12(4Q32.3) WILD-TYPE     92     24     52
D42V3, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                         101                            92
  CLUS_2                         138                            24
  CLUS_3                          83                            52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q32.3) MUTATED       74     88     70
  DEL PEAK 12(4Q32.3) WILD-TYPE     68     26     30
D42V4, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          74                            68
  CLUS_2                          88                            26
  CLUS_3                          70                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q32.3) MUTATED       45     41     37
  DEL PEAK 12(4Q32.3) WILD-TYPE     15     32     24
D42V5, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          45                            15
  CLUS_2                          41                            32
  CLUS_3                          37                            24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q32.3) MUTATED       37     24     33     29
  DEL PEAK 12(4Q32.3) WILD-TYPE     17     17     19     18
D42V6, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          37                            17
  CLUS_2                          24                            17
  CLUS_3                          33                            19
  CLUS_4                          29                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q32.3) MUTATED       71    117     94     38
  DEL PEAK 12(4Q32.3) WILD-TYPE     39     28     59     40
D42V7, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          71                            39
  CLUS_2                         117                            28
  CLUS_3                          94                            59
  CLUS_4                          38                            40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q32.3) MUTATED      125    118     77
  DEL PEAK 12(4Q32.3) WILD-TYPE     77     31     58
D42V8, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                         125                            77
  CLUS_2                         118                            31
  CLUS_3                          77                            58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q32.3) MUTATED       98     94     65     50
  DEL PEAK 12(4Q32.3) WILD-TYPE     47     36     60     14
D42V9, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          98                            47
  CLUS_2                          94                            36
  CLUS_3                          65                            60
  CLUS_4                          50                            14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q32.3) MUTATED       53    112    142
  DEL PEAK 12(4Q32.3) WILD-TYPE     21     81     55
D42V10, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          53                            21
  CLUS_2                         112                            81
  CLUS_3                         142                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q32.3) MUTATED       96     66     51
  DEL PEAK 12(4Q32.3) WILD-TYPE     29     46     40
D42V11, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          96                            29
  CLUS_2                          66                            46
  CLUS_3                          51                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 12(4Q32.3) MUTATED       39     24      9     14     25     34
  DEL PEAK 12(4Q32.3) WILD-TYPE     14     10     19     12     13     25
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 12(4Q32.3) MUTATED       25     11     32
  DEL PEAK 12(4Q32.3) WILD-TYPE      6     10      6
D42V12, multiclass
        clus
vv       DEL PEAK 12(4Q32.3) MUTATED DEL PEAK 12(4Q32.3) WILD-TYPE
  CLUS_1                          39                            14
  CLUS_2                          24                            10
  CLUS_3                           9                            19
  CLUS_4                          14                            12
  CLUS_5                          25                            13
  CLUS_6                          34                            25
  CLUS_7                          25                             6
  CLUS_8                          11                            10
  CLUS_9                          32                             6
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(43) Variable = DEL PEAK 13(4Q35.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q35.2) MUTATED       30     40     16     21
  DEL PEAK 13(4Q35.2) WILD-TYPE     12     12     16      7
D43V1, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          30                            12
  CLUS_2                          40                            12
  CLUS_3                          16                            16
  CLUS_4                          21                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q35.2) MUTATED       33     43     31
  DEL PEAK 13(4Q35.2) WILD-TYPE     14     13     20
D43V2, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          33                            14
  CLUS_2                          43                            13
  CLUS_3                          31                            20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q35.2) MUTATED      105    137     81
  DEL PEAK 13(4Q35.2) WILD-TYPE     88     25     54
D43V3, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                         105                            88
  CLUS_2                         137                            25
  CLUS_3                          81                            54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q35.2) MUTATED       74     90     67
  DEL PEAK 13(4Q35.2) WILD-TYPE     68     24     33
D43V4, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          74                            68
  CLUS_2                          90                            24
  CLUS_3                          67                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q35.2) MUTATED       43     44     38
  DEL PEAK 13(4Q35.2) WILD-TYPE     17     29     23
D43V5, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          43                            17
  CLUS_2                          44                            29
  CLUS_3                          38                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q35.2) MUTATED       36     24     34     31
  DEL PEAK 13(4Q35.2) WILD-TYPE     18     17     18     16
D43V6, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          36                            18
  CLUS_2                          24                            17
  CLUS_3                          34                            18
  CLUS_4                          31                            16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q35.2) MUTATED       69    117     97     38
  DEL PEAK 13(4Q35.2) WILD-TYPE     41     28     56     40
D43V7, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          69                            41
  CLUS_2                         117                            28
  CLUS_3                          97                            56
  CLUS_4                          38                            40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q35.2) MUTATED      126    117     78
  DEL PEAK 13(4Q35.2) WILD-TYPE     76     32     57
D43V8, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                         126                            76
  CLUS_2                         117                            32
  CLUS_3                          78                            57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q35.2) MUTATED       97     92     67     50
  DEL PEAK 13(4Q35.2) WILD-TYPE     48     38     58     14
D43V9, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          97                            48
  CLUS_2                          92                            38
  CLUS_3                          67                            58
  CLUS_4                          50                            14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q35.2) MUTATED       55    111    140
  DEL PEAK 13(4Q35.2) WILD-TYPE     19     82     57
D43V10, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          55                            19
  CLUS_2                         111                            82
  CLUS_3                         140                            57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q35.2) MUTATED       91     69     52
  DEL PEAK 13(4Q35.2) WILD-TYPE     34     43     39
D43V11, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          91                            34
  CLUS_2                          69                            43
  CLUS_3                          52                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 13(4Q35.2) MUTATED       38     24      9     15     23     34
  DEL PEAK 13(4Q35.2) WILD-TYPE     15     10     19     11     15     25
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 13(4Q35.2) MUTATED       26     13     30
  DEL PEAK 13(4Q35.2) WILD-TYPE      5      8      8
D43V12, multiclass
        clus
vv       DEL PEAK 13(4Q35.2) MUTATED DEL PEAK 13(4Q35.2) WILD-TYPE
  CLUS_1                          38                            15
  CLUS_2                          24                            10
  CLUS_3                           9                            19
  CLUS_4                          15                            11
  CLUS_5                          23                            15
  CLUS_6                          34                            25
  CLUS_7                          26                             5
  CLUS_8                          13                             8
  CLUS_9                          30                             8
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(44) Variable = DEL PEAK 14(5Q11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q11.2) MUTATED       31     42     21     21
  DEL PEAK 14(5Q11.2) WILD-TYPE     11     10     11      7
D44V1, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          31                            11
  CLUS_2                          42                            10
  CLUS_3                          21                            11
  CLUS_4                          21                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q11.2) MUTATED       33     45     37
  DEL PEAK 14(5Q11.2) WILD-TYPE     14     11     14
D44V2, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          33                            14
  CLUS_2                          45                            11
  CLUS_3                          37                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q11.2) MUTATED      106    134    120
  DEL PEAK 14(5Q11.2) WILD-TYPE     87     28     15
D44V3, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                         106                            87
  CLUS_2                         134                            28
  CLUS_3                         120                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q11.2) MUTATED       84     92     83
  DEL PEAK 14(5Q11.2) WILD-TYPE     58     22     17
D44V4, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          84                            58
  CLUS_2                          92                            22
  CLUS_3                          83                            17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q11.2) MUTATED       44     53     45
  DEL PEAK 14(5Q11.2) WILD-TYPE     16     20     16
D44V5, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          44                            16
  CLUS_2                          53                            20
  CLUS_3                          45                            16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q11.2) MUTATED       36     30     39     37
  DEL PEAK 14(5Q11.2) WILD-TYPE     18     11     13     10
D44V6, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          36                            18
  CLUS_2                          30                            11
  CLUS_3                          39                            13
  CLUS_4                          37                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q11.2) MUTATED       75    120    115     47
  DEL PEAK 14(5Q11.2) WILD-TYPE     35     25     38     31
D44V7, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          75                            35
  CLUS_2                         120                            25
  CLUS_3                         115                            38
  CLUS_4                          47                            31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q11.2) MUTATED      146    124     87
  DEL PEAK 14(5Q11.2) WILD-TYPE     56     25     48
D44V8, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                         146                            56
  CLUS_2                         124                            25
  CLUS_3                          87                            48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q11.2) MUTATED      109    103     80     52
  DEL PEAK 14(5Q11.2) WILD-TYPE     36     27     45     12
D44V9, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                         109                            36
  CLUS_2                         103                            27
  CLUS_3                          80                            45
  CLUS_4                          52                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q11.2) MUTATED       57    121    166
  DEL PEAK 14(5Q11.2) WILD-TYPE     17     72     31
D44V10, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          57                            17
  CLUS_2                         121                            72
  CLUS_3                         166                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q11.2) MUTATED      104     79     56
  DEL PEAK 14(5Q11.2) WILD-TYPE     21     33     35
D44V11, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                         104                            21
  CLUS_2                          79                            33
  CLUS_3                          56                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 14(5Q11.2) MUTATED       36     27     14     15     23     48
  DEL PEAK 14(5Q11.2) WILD-TYPE     17      7     14     11     15     11
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 14(5Q11.2) MUTATED       26     17     33
  DEL PEAK 14(5Q11.2) WILD-TYPE      5      4      5
D44V12, multiclass
        clus
vv       DEL PEAK 14(5Q11.2) MUTATED DEL PEAK 14(5Q11.2) WILD-TYPE
  CLUS_1                          36                            17
  CLUS_2                          27                             7
  CLUS_3                          14                            14
  CLUS_4                          15                            11
  CLUS_5                          23                            15
  CLUS_6                          48                            11
  CLUS_7                          26                             5
  CLUS_8                          17                             4
  CLUS_9                          33                             5
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(45) Variable = DEL PEAK 15(6P25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED        8     17      6      5
  DEL PEAK 15(6P25.3) WILD-TYPE     34     35     26     23
D45V1, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                           8                            34
  CLUS_2                          17                            35
  CLUS_3                           6                            26
  CLUS_4                           5                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED        9     18      9
  DEL PEAK 15(6P25.3) WILD-TYPE     38     38     42
D45V2, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                           9                            38
  CLUS_2                          18                            38
  CLUS_3                           9                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       41     64     23
  DEL PEAK 15(6P25.3) WILD-TYPE    152     98    112
D45V3, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          41                           152
  CLUS_2                          64                            98
  CLUS_3                          23                           112
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       25     49     24
  DEL PEAK 15(6P25.3) WILD-TYPE    117     65     76
D45V4, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          25                           117
  CLUS_2                          49                            65
  CLUS_3                          24                            76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       14     22     12
  DEL PEAK 15(6P25.3) WILD-TYPE     46     51     49
D45V5, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          14                            46
  CLUS_2                          22                            51
  CLUS_3                          12                            49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED       13     14     17      4
  DEL PEAK 15(6P25.3) WILD-TYPE     41     27     35     43
D45V6, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          13                            41
  CLUS_2                          14                            27
  CLUS_3                          17                            35
  CLUS_4                           4                            43
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED       28     62     22     15
  DEL PEAK 15(6P25.3) WILD-TYPE     82     83    131     63
D45V7, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          28                            82
  CLUS_2                          62                            83
  CLUS_3                          22                           131
  CLUS_4                          15                            63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       46     63     18
  DEL PEAK 15(6P25.3) WILD-TYPE    156     86    117
D45V8, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          46                           156
  CLUS_2                          63                            86
  CLUS_3                          18                           117
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED       36     35     26     25
  DEL PEAK 15(6P25.3) WILD-TYPE    109     95     99     39
D45V9, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          36                           109
  CLUS_2                          35                            95
  CLUS_3                          26                            99
  CLUS_4                          25                            39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       31     48     43
  DEL PEAK 15(6P25.3) WILD-TYPE     43    145    154
D45V10, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          31                            43
  CLUS_2                          48                           145
  CLUS_3                          43                           154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       42     28     18
  DEL PEAK 15(6P25.3) WILD-TYPE     83     84     73
D45V11, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          42                            83
  CLUS_2                          28                            84
  CLUS_3                          18                            73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 15(6P25.3) MUTATED       18      5      5      2      8     15
  DEL PEAK 15(6P25.3) WILD-TYPE     35     29     23     24     30     44
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 15(6P25.3) MUTATED       16      7     12
  DEL PEAK 15(6P25.3) WILD-TYPE     15     14     26
D45V12, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          18                            35
  CLUS_2                           5                            29
  CLUS_3                           5                            23
  CLUS_4                           2                            24
  CLUS_5                           8                            30
  CLUS_6                          15                            44
  CLUS_7                          16                            15
  CLUS_8                           7                            14
  CLUS_9                          12                            26
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(46) Variable = DEL PEAK 16(6Q22.31) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q22.31) MUTATED        8     20      4      6
  DEL PEAK 16(6Q22.31) WILD-TYPE     34     32     28     22
D46V1, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                            8                             34
  CLUS_2                           20                             32
  CLUS_3                            4                             28
  CLUS_4                            6                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q22.31) MUTATED       10     22      6
  DEL PEAK 16(6Q22.31) WILD-TYPE     37     34     45
D46V2, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           10                             37
  CLUS_2                           22                             34
  CLUS_3                            6                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q22.31) MUTATED       33     59     26
  DEL PEAK 16(6Q22.31) WILD-TYPE    160    103    109
D46V3, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           33                            160
  CLUS_2                           59                            103
  CLUS_3                           26                            109
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q22.31) MUTATED       26     42     20
  DEL PEAK 16(6Q22.31) WILD-TYPE    116     72     80
D46V4, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           26                            116
  CLUS_2                           42                             72
  CLUS_3                           20                             80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q22.31) MUTATED       17     20     12
  DEL PEAK 16(6Q22.31) WILD-TYPE     43     53     49
D46V5, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           17                             43
  CLUS_2                           20                             53
  CLUS_3                           12                             49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q22.31) MUTATED       15     11     15      8
  DEL PEAK 16(6Q22.31) WILD-TYPE     39     30     37     39
D46V6, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           15                             39
  CLUS_2                           11                             30
  CLUS_3                           15                             37
  CLUS_4                            8                             39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q22.31) MUTATED       21     53     26     17
  DEL PEAK 16(6Q22.31) WILD-TYPE     89     92    127     61
D46V7, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           21                             89
  CLUS_2                           53                             92
  CLUS_3                           26                            127
  CLUS_4                           17                             61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q22.31) MUTATED       41     52     24
  DEL PEAK 16(6Q22.31) WILD-TYPE    161     97    111
D46V8, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           41                            161
  CLUS_2                           52                             97
  CLUS_3                           24                            111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q22.31) MUTATED       42     35     21     13
  DEL PEAK 16(6Q22.31) WILD-TYPE    103     95    104     51
D46V9, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           42                            103
  CLUS_2                           35                             95
  CLUS_3                           21                            104
  CLUS_4                           13                             51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q22.31) MUTATED       26     46     39
  DEL PEAK 16(6Q22.31) WILD-TYPE     48    147    158
D46V10, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           26                             48
  CLUS_2                           46                            147
  CLUS_3                           39                            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q22.31) MUTATED       38     22     17
  DEL PEAK 16(6Q22.31) WILD-TYPE     87     90     74
D46V11, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           38                             87
  CLUS_2                           22                             90
  CLUS_3                           17                             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 16(6Q22.31) MUTATED       15      6      5      9      6      8
  DEL PEAK 16(6Q22.31) WILD-TYPE     38     28     23     17     32     51
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 16(6Q22.31) MUTATED       13      4     11
  DEL PEAK 16(6Q22.31) WILD-TYPE     18     17     27
D46V12, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           15                             38
  CLUS_2                            6                             28
  CLUS_3                            5                             23
  CLUS_4                            9                             17
  CLUS_5                            6                             32
  CLUS_6                            8                             51
  CLUS_7                           13                             18
  CLUS_8                            4                             17
  CLUS_9                           11                             27
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(47) Variable = DEL PEAK 17(6Q26) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6Q26) MUTATED        8     21      5      6
  DEL PEAK 17(6Q26) WILD-TYPE     34     31     27     22
D47V1, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                         8                          34
  CLUS_2                        21                          31
  CLUS_3                         5                          27
  CLUS_4                         6                          22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       10     23      7
  DEL PEAK 17(6Q26) WILD-TYPE     37     33     44
D47V2, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        10                          37
  CLUS_2                        23                          33
  CLUS_3                         7                          44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       34     64     32
  DEL PEAK 17(6Q26) WILD-TYPE    159     98    103
D47V3, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        34                         159
  CLUS_2                        64                          98
  CLUS_3                        32                         103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       27     48     23
  DEL PEAK 17(6Q26) WILD-TYPE    115     66     77
D47V4, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        27                         115
  CLUS_2                        48                          66
  CLUS_3                        23                          77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       19     21     17
  DEL PEAK 17(6Q26) WILD-TYPE     41     52     44
D47V5, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        19                          41
  CLUS_2                        21                          52
  CLUS_3                        17                          44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6Q26) MUTATED       15     14     17     11
  DEL PEAK 17(6Q26) WILD-TYPE     39     27     35     36
D47V6, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        15                          39
  CLUS_2                        14                          27
  CLUS_3                        17                          35
  CLUS_4                        11                          36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6Q26) MUTATED       24     58     31     16
  DEL PEAK 17(6Q26) WILD-TYPE     86     87    122     62
D47V7, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        24                          86
  CLUS_2                        58                          87
  CLUS_3                        31                         122
  CLUS_4                        16                          62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       40     60     29
  DEL PEAK 17(6Q26) WILD-TYPE    162     89    106
D47V8, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        40                         162
  CLUS_2                        60                          89
  CLUS_3                        29                         106
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6Q26) MUTATED       43     40     21     19
  DEL PEAK 17(6Q26) WILD-TYPE    102     90    104     45
D47V9, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        43                         102
  CLUS_2                        40                          90
  CLUS_3                        21                         104
  CLUS_4                        19                          45
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       29     51     43
  DEL PEAK 17(6Q26) WILD-TYPE     45    142    154
D47V10, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        29                          45
  CLUS_2                        51                         142
  CLUS_3                        43                         154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       43     22     21
  DEL PEAK 17(6Q26) WILD-TYPE     82     90     70
D47V11, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        43                          82
  CLUS_2                        22                          90
  CLUS_3                        21                          70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 17(6Q26) MUTATED       16      9      4      8      8     10     16
  DEL PEAK 17(6Q26) WILD-TYPE     37     25     24     18     30     49     15
                             vv
clus                          CLUS_8 CLUS_9
  DEL PEAK 17(6Q26) MUTATED        3     12
  DEL PEAK 17(6Q26) WILD-TYPE     18     26
D47V12, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        16                          37
  CLUS_2                         9                          25
  CLUS_3                         4                          24
  CLUS_4                         8                          18
  CLUS_5                         8                          30
  CLUS_6                        10                          49
  CLUS_7                        16                          15
  CLUS_8                         3                          18
  CLUS_9                        12                          26
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(48) Variable = DEL PEAK 18(7Q11.22) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(7Q11.22) MUTATED        4      3      2      3
  DEL PEAK 18(7Q11.22) WILD-TYPE     38     49     30     25
D48V1, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                            4                             38
  CLUS_2                            3                             49
  CLUS_3                            2                             30
  CLUS_4                            3                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q11.22) MUTATED        4      3      5
  DEL PEAK 18(7Q11.22) WILD-TYPE     43     53     46
D48V2, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                            4                             43
  CLUS_2                            3                             53
  CLUS_3                            5                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q11.22) MUTATED       13      9     25
  DEL PEAK 18(7Q11.22) WILD-TYPE    180    153    110
D48V3, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                           13                            180
  CLUS_2                            9                            153
  CLUS_3                           25                            110
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q11.22) MUTATED       16     10      9
  DEL PEAK 18(7Q11.22) WILD-TYPE    126    104     91
D48V4, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                           16                            126
  CLUS_2                           10                            104
  CLUS_3                            9                             91
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q11.22) MUTATED        8      8      6
  DEL PEAK 18(7Q11.22) WILD-TYPE     52     65     55
D48V5, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                            8                             52
  CLUS_2                            8                             65
  CLUS_3                            6                             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(7Q11.22) MUTATED       10      3      5      4
  DEL PEAK 18(7Q11.22) WILD-TYPE     44     38     47     43
D48V6, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                           10                             44
  CLUS_2                            3                             38
  CLUS_3                            5                             47
  CLUS_4                            4                             43
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(7Q11.22) MUTATED        6      8     27      6
  DEL PEAK 18(7Q11.22) WILD-TYPE    104    137    126     72
D48V7, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                            6                            104
  CLUS_2                            8                            137
  CLUS_3                           27                            126
  CLUS_4                            6                             72
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q11.22) MUTATED       14      8     25
  DEL PEAK 18(7Q11.22) WILD-TYPE    188    141    110
D48V8, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                           14                            188
  CLUS_2                            8                            141
  CLUS_3                           25                            110
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(7Q11.22) MUTATED       15     15      9      5
  DEL PEAK 18(7Q11.22) WILD-TYPE    130    115    116     59
D48V9, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                           15                            130
  CLUS_2                           15                            115
  CLUS_3                            9                            116
  CLUS_4                            5                             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q11.22) MUTATED        6     14     24
  DEL PEAK 18(7Q11.22) WILD-TYPE     68    179    173
D48V10, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                            6                             68
  CLUS_2                           14                            179
  CLUS_3                           24                            173
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q11.22) MUTATED       15     10     10
  DEL PEAK 18(7Q11.22) WILD-TYPE    110    102     81
D48V11, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                           15                            110
  CLUS_2                           10                            102
  CLUS_3                           10                             81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 18(7Q11.22) MUTATED        4      3      0      2      7     10
  DEL PEAK 18(7Q11.22) WILD-TYPE     49     31     28     24     31     49
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 18(7Q11.22) MUTATED        5      3      1
  DEL PEAK 18(7Q11.22) WILD-TYPE     26     18     37
D48V12, multiclass
        clus
vv       DEL PEAK 18(7Q11.22) MUTATED DEL PEAK 18(7Q11.22) WILD-TYPE
  CLUS_1                            4                             49
  CLUS_2                            3                             31
  CLUS_3                            0                             28
  CLUS_4                            2                             24
  CLUS_5                            7                             31
  CLUS_6                           10                             49
  CLUS_7                            5                             26
  CLUS_8                            3                             18
  CLUS_9                            1                             37
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(49) Variable = DEL PEAK 19(7Q36.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(7Q36.3) MUTATED       12      6      8      5
  DEL PEAK 19(7Q36.3) WILD-TYPE     30     46     24     23
D49V1, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          12                            30
  CLUS_2                           6                            46
  CLUS_3                           8                            24
  CLUS_4                           5                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       14      6     11
  DEL PEAK 19(7Q36.3) WILD-TYPE     33     50     40
D49V2, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          14                            33
  CLUS_2                           6                            50
  CLUS_3                          11                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       41     21     41
  DEL PEAK 19(7Q36.3) WILD-TYPE    152    141     94
D49V3, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          41                           152
  CLUS_2                          21                           141
  CLUS_3                          41                            94
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       34     19     24
  DEL PEAK 19(7Q36.3) WILD-TYPE    108     95     76
D49V4, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          34                           108
  CLUS_2                          19                            95
  CLUS_3                          24                            76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       13     15     12
  DEL PEAK 19(7Q36.3) WILD-TYPE     47     58     49
D49V5, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          13                            47
  CLUS_2                          15                            58
  CLUS_3                          12                            49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(7Q36.3) MUTATED       17      5     11      7
  DEL PEAK 19(7Q36.3) WILD-TYPE     37     36     41     40
D49V6, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          17                            37
  CLUS_2                           5                            36
  CLUS_3                          11                            41
  CLUS_4                           7                            40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(7Q36.3) MUTATED       26     18     48     11
  DEL PEAK 19(7Q36.3) WILD-TYPE     84    127    105     67
D49V7, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          26                            84
  CLUS_2                          18                           127
  CLUS_3                          48                           105
  CLUS_4                          11                            67
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       45     20     38
  DEL PEAK 19(7Q36.3) WILD-TYPE    157    129     97
D49V8, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          45                           157
  CLUS_2                          20                           129
  CLUS_3                          38                            97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(7Q36.3) MUTATED       35     29     23      9
  DEL PEAK 19(7Q36.3) WILD-TYPE    110    101    102     55
D49V9, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          35                           110
  CLUS_2                          29                           101
  CLUS_3                          23                           102
  CLUS_4                           9                            55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       11     36     49
  DEL PEAK 19(7Q36.3) WILD-TYPE     63    157    148
D49V10, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          11                            63
  CLUS_2                          36                           157
  CLUS_3                          49                           148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       29     29     12
  DEL PEAK 19(7Q36.3) WILD-TYPE     96     83     79
D49V11, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          29                            96
  CLUS_2                          29                            83
  CLUS_3                          12                            79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 19(7Q36.3) MUTATED       11     11      2      3     14     14
  DEL PEAK 19(7Q36.3) WILD-TYPE     42     23     26     23     24     45
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 19(7Q36.3) MUTATED        7      4      4
  DEL PEAK 19(7Q36.3) WILD-TYPE     24     17     34
D49V12, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          11                            42
  CLUS_2                          11                            23
  CLUS_3                           2                            26
  CLUS_4                           3                            23
  CLUS_5                          14                            24
  CLUS_6                          14                            45
  CLUS_7                           7                            24
  CLUS_8                           4                            17
  CLUS_9                           4                            34
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(50) Variable = DEL PEAK 20(8P23.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(8P23.2) MUTATED       28     39     22     17
  DEL PEAK 20(8P23.2) WILD-TYPE     14     13     10     11
D50V1, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          28                            14
  CLUS_2                          39                            13
  CLUS_3                          22                            10
  CLUS_4                          17                            11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED       30     40     36
  DEL PEAK 20(8P23.2) WILD-TYPE     17     16     15
D50V2, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          30                            17
  CLUS_2                          40                            16
  CLUS_3                          36                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED      110    118    107
  DEL PEAK 20(8P23.2) WILD-TYPE     83     44     28
D50V3, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                         110                            83
  CLUS_2                         118                            44
  CLUS_3                         107                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED       84     86     72
  DEL PEAK 20(8P23.2) WILD-TYPE     58     28     28
D50V4, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          84                            58
  CLUS_2                          86                            28
  CLUS_3                          72                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED       45     54     38
  DEL PEAK 20(8P23.2) WILD-TYPE     15     19     23
D50V5, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          45                            15
  CLUS_2                          54                            19
  CLUS_3                          38                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(8P23.2) MUTATED       37     25     40     35
  DEL PEAK 20(8P23.2) WILD-TYPE     17     16     12     12
D50V6, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          37                            17
  CLUS_2                          25                            16
  CLUS_3                          40                            12
  CLUS_4                          35                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(8P23.2) MUTATED       72    109    104     47
  DEL PEAK 20(8P23.2) WILD-TYPE     38     36     49     31
D50V7, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          72                            38
  CLUS_2                         109                            36
  CLUS_3                         104                            49
  CLUS_4                          47                            31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED      128    113     91
  DEL PEAK 20(8P23.2) WILD-TYPE     74     36     44
D50V8, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                         128                            74
  CLUS_2                         113                            36
  CLUS_3                          91                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(8P23.2) MUTATED      100     96     76     46
  DEL PEAK 20(8P23.2) WILD-TYPE     45     34     49     18
D50V9, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                         100                            45
  CLUS_2                          96                            34
  CLUS_3                          76                            49
  CLUS_4                          46                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED       53    121    144
  DEL PEAK 20(8P23.2) WILD-TYPE     21     72     53
D50V10, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          53                            21
  CLUS_2                         121                            72
  CLUS_3                         144                            53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED       90     73     59
  DEL PEAK 20(8P23.2) WILD-TYPE     35     39     32
D50V11, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          90                            35
  CLUS_2                          73                            39
  CLUS_3                          59                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 20(8P23.2) MUTATED       35     28     11     20     20     38
  DEL PEAK 20(8P23.2) WILD-TYPE     18      6     17      6     18     21
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 20(8P23.2) MUTATED       25     13     32
  DEL PEAK 20(8P23.2) WILD-TYPE      6      8      6
D50V12, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          35                            18
  CLUS_2                          28                             6
  CLUS_3                          11                            17
  CLUS_4                          20                             6
  CLUS_5                          20                            18
  CLUS_6                          38                            21
  CLUS_7                          25                             6
  CLUS_8                          13                             8
  CLUS_9                          32                             6
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(51) Variable = DEL PEAK 21(9P23) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(9P23) MUTATED       36     30     19     16
  DEL PEAK 21(9P23) WILD-TYPE      6     22     13     12
D51V1, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        36                           6
  CLUS_2                        30                          22
  CLUS_3                        19                          13
  CLUS_4                        16                          12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9P23) MUTATED       40     30     31
  DEL PEAK 21(9P23) WILD-TYPE      7     26     20
D51V2, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        40                           7
  CLUS_2                        30                          26
  CLUS_3                        31                          20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9P23) MUTATED      109     99    115
  DEL PEAK 21(9P23) WILD-TYPE     84     63     20
D51V3, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                       109                          84
  CLUS_2                        99                          63
  CLUS_3                       115                          20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9P23) MUTATED       87     71     77
  DEL PEAK 21(9P23) WILD-TYPE     55     43     23
D51V4, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        87                          55
  CLUS_2                        71                          43
  CLUS_3                        77                          23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9P23) MUTATED       33     48     43
  DEL PEAK 21(9P23) WILD-TYPE     27     25     18
D51V5, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        33                          27
  CLUS_2                        48                          25
  CLUS_3                        43                          18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(9P23) MUTATED       28     27     35     34
  DEL PEAK 21(9P23) WILD-TYPE     26     14     17     13
D51V6, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        28                          26
  CLUS_2                        27                          14
  CLUS_3                        35                          17
  CLUS_4                        34                          13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(9P23) MUTATED       86     81    111     42
  DEL PEAK 21(9P23) WILD-TYPE     24     64     42     36
D51V7, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        86                          24
  CLUS_2                        81                          64
  CLUS_3                       111                          42
  CLUS_4                        42                          36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9P23) MUTATED      153     83     84
  DEL PEAK 21(9P23) WILD-TYPE     49     66     51
D51V8, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                       153                          49
  CLUS_2                        83                          66
  CLUS_3                        84                          51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(9P23) MUTATED       94    103     71     40
  DEL PEAK 21(9P23) WILD-TYPE     51     27     54     24
D51V9, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        94                          51
  CLUS_2                       103                          27
  CLUS_3                        71                          54
  CLUS_4                        40                          24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9P23) MUTATED       39    121    148
  DEL PEAK 21(9P23) WILD-TYPE     35     72     49
D51V10, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        39                          35
  CLUS_2                       121                          72
  CLUS_3                       148                          49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(9P23) MUTATED       87     82     49
  DEL PEAK 21(9P23) WILD-TYPE     38     30     42
D51V11, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        87                          38
  CLUS_2                        82                          30
  CLUS_3                        49                          42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 21(9P23) MUTATED       37     28     12     13     28     38     18
  DEL PEAK 21(9P23) WILD-TYPE     16      6     16     13     10     21     13
                             vv
clus                          CLUS_8 CLUS_9
  DEL PEAK 21(9P23) MUTATED       16     28
  DEL PEAK 21(9P23) WILD-TYPE      5     10
D51V12, multiclass
        clus
vv       DEL PEAK 21(9P23) MUTATED DEL PEAK 21(9P23) WILD-TYPE
  CLUS_1                        37                          16
  CLUS_2                        28                           6
  CLUS_3                        12                          16
  CLUS_4                        13                          13
  CLUS_5                        28                          10
  CLUS_6                        38                          21
  CLUS_7                        18                          13
  CLUS_8                        16                           5
  CLUS_9                        28                          10
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(52) Variable = DEL PEAK 22(9P21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(9P21.3) MUTATED       36     40     23     18
  DEL PEAK 22(9P21.3) WILD-TYPE      6     12      9     10
D52V1, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          36                             6
  CLUS_2                          40                            12
  CLUS_3                          23                             9
  CLUS_4                          18                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P21.3) MUTATED       39     43     35
  DEL PEAK 22(9P21.3) WILD-TYPE      8     13     16
D52V2, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          39                             8
  CLUS_2                          43                            13
  CLUS_3                          35                            16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P21.3) MUTATED      129    127    122
  DEL PEAK 22(9P21.3) WILD-TYPE     64     35     13
D52V3, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                         129                            64
  CLUS_2                         127                            35
  CLUS_3                         122                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P21.3) MUTATED      106     88     83
  DEL PEAK 22(9P21.3) WILD-TYPE     36     26     17
D52V4, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                         106                            36
  CLUS_2                          88                            26
  CLUS_3                          83                            17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P21.3) MUTATED       46     54     48
  DEL PEAK 22(9P21.3) WILD-TYPE     14     19     13
D52V5, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          46                            14
  CLUS_2                          54                            19
  CLUS_3                          48                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(9P21.3) MUTATED       39     30     40     39
  DEL PEAK 22(9P21.3) WILD-TYPE     15     11     12      8
D52V6, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          39                            15
  CLUS_2                          30                            11
  CLUS_3                          40                            12
  CLUS_4                          39                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(9P21.3) MUTATED       97    106    122     50
  DEL PEAK 22(9P21.3) WILD-TYPE     13     39     31     28
D52V7, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          97                            13
  CLUS_2                         106                            39
  CLUS_3                         122                            31
  CLUS_4                          50                            28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P21.3) MUTATED      171    107     97
  DEL PEAK 22(9P21.3) WILD-TYPE     31     42     38
D52V8, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                         171                            31
  CLUS_2                         107                            42
  CLUS_3                          97                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(9P21.3) MUTATED      109    109     92     52
  DEL PEAK 22(9P21.3) WILD-TYPE     36     21     33     12
D52V9, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                         109                            36
  CLUS_2                         109                            21
  CLUS_3                          92                            33
  CLUS_4                          52                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P21.3) MUTATED       55    144    163
  DEL PEAK 22(9P21.3) WILD-TYPE     19     49     34
D52V10, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          55                            19
  CLUS_2                         144                            49
  CLUS_3                         163                            34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P21.3) MUTATED       99     94     63
  DEL PEAK 22(9P21.3) WILD-TYPE     26     18     28
D52V11, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          99                            26
  CLUS_2                          94                            18
  CLUS_3                          63                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 22(9P21.3) MUTATED       43     31     15     18     31     45
  DEL PEAK 22(9P21.3) WILD-TYPE     10      3     13      8      7     14
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 22(9P21.3) MUTATED       24     19     30
  DEL PEAK 22(9P21.3) WILD-TYPE      7      2      8
D52V12, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          43                            10
  CLUS_2                          31                             3
  CLUS_3                          15                            13
  CLUS_4                          18                             8
  CLUS_5                          31                             7
  CLUS_6                          45                            14
  CLUS_7                          24                             7
  CLUS_8                          19                             2
  CLUS_9                          30                             8
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(53) Variable = DEL PEAK 23(9Q21.11) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9Q21.11) MUTATED       28     13     19     15
  DEL PEAK 23(9Q21.11) WILD-TYPE     14     39     13     13
D53V1, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           28                             14
  CLUS_2                           13                             39
  CLUS_3                           19                             13
  CLUS_4                           15                             13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9Q21.11) MUTATED       31     14     30
  DEL PEAK 23(9Q21.11) WILD-TYPE     16     42     21
D53V2, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           31                             16
  CLUS_2                           14                             42
  CLUS_3                           30                             21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9Q21.11) MUTATED      101     51     96
  DEL PEAK 23(9Q21.11) WILD-TYPE     92    111     39
D53V3, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                          101                             92
  CLUS_2                           51                            111
  CLUS_3                           96                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9Q21.11) MUTATED       84     31     66
  DEL PEAK 23(9Q21.11) WILD-TYPE     58     83     34
D53V4, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           84                             58
  CLUS_2                           31                             83
  CLUS_3                           66                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9Q21.11) MUTATED       29     38     26
  DEL PEAK 23(9Q21.11) WILD-TYPE     31     35     35
D53V5, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           29                             31
  CLUS_2                           38                             35
  CLUS_3                           26                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9Q21.11) MUTATED       22     18     32     21
  DEL PEAK 23(9Q21.11) WILD-TYPE     32     23     20     26
D53V6, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           22                             32
  CLUS_2                           18                             23
  CLUS_3                           32                             20
  CLUS_4                           21                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9Q21.11) MUTATED       71     34    101     40
  DEL PEAK 23(9Q21.11) WILD-TYPE     39    111     52     38
D53V7, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           71                             39
  CLUS_2                           34                            111
  CLUS_3                          101                             52
  CLUS_4                           40                             38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9Q21.11) MUTATED      133     32     81
  DEL PEAK 23(9Q21.11) WILD-TYPE     69    117     54
D53V8, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                          133                             69
  CLUS_2                           32                            117
  CLUS_3                           81                             54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9Q21.11) MUTATED       63     80     72     19
  DEL PEAK 23(9Q21.11) WILD-TYPE     82     50     53     45
D53V9, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           63                             82
  CLUS_2                           80                             50
  CLUS_3                           72                             53
  CLUS_4                           19                             45
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9Q21.11) MUTATED       19     89    126
  DEL PEAK 23(9Q21.11) WILD-TYPE     55    104     71
D53V10, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           19                             55
  CLUS_2                           89                            104
  CLUS_3                          126                             71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9Q21.11) MUTATED       60     73     38
  DEL PEAK 23(9Q21.11) WILD-TYPE     65     39     53
D53V11, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           60                             65
  CLUS_2                           73                             39
  CLUS_3                           38                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 23(9Q21.11) MUTATED       23     25     11     13     27     38
  DEL PEAK 23(9Q21.11) WILD-TYPE     30      9     17     13     11     21
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 23(9Q21.11) MUTATED        8      9     17
  DEL PEAK 23(9Q21.11) WILD-TYPE     23     12     21
D53V12, multiclass
        clus
vv       DEL PEAK 23(9Q21.11) MUTATED DEL PEAK 23(9Q21.11) WILD-TYPE
  CLUS_1                           23                             30
  CLUS_2                           25                              9
  CLUS_3                           11                             17
  CLUS_4                           13                             13
  CLUS_5                           27                             11
  CLUS_6                           38                             21
  CLUS_7                            8                             23
  CLUS_8                            9                             12
  CLUS_9                           17                             21
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(54) Variable = DEL PEAK 24(10P15.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P15.3) MUTATED       16     27     11     14
  DEL PEAK 24(10P15.3) WILD-TYPE     26     25     21     14
D54V1, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           16                             26
  CLUS_2                           27                             25
  CLUS_3                           11                             21
  CLUS_4                           14                             14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       19     28     21
  DEL PEAK 24(10P15.3) WILD-TYPE     28     28     30
D54V2, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           19                             28
  CLUS_2                           28                             28
  CLUS_3                           21                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       61    100     61
  DEL PEAK 24(10P15.3) WILD-TYPE    132     62     74
D54V3, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           61                            132
  CLUS_2                          100                             62
  CLUS_3                           61                             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       45     82     39
  DEL PEAK 24(10P15.3) WILD-TYPE     97     32     61
D54V4, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           45                             97
  CLUS_2                           82                             32
  CLUS_3                           39                             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       25     28     33
  DEL PEAK 24(10P15.3) WILD-TYPE     35     45     28
D54V5, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           25                             35
  CLUS_2                           28                             45
  CLUS_3                           33                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P15.3) MUTATED       22     16     21     27
  DEL PEAK 24(10P15.3) WILD-TYPE     32     25     31     20
D54V6, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           22                             32
  CLUS_2                           16                             25
  CLUS_3                           21                             31
  CLUS_4                           27                             20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P15.3) MUTATED       38     91     66     26
  DEL PEAK 24(10P15.3) WILD-TYPE     72     54     87     52
D54V7, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           38                             72
  CLUS_2                           91                             54
  CLUS_3                           66                             87
  CLUS_4                           26                             52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       75     95     51
  DEL PEAK 24(10P15.3) WILD-TYPE    127     54     84
D54V8, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           75                            127
  CLUS_2                           95                             54
  CLUS_3                           51                             84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P15.3) MUTATED       68     69     35     43
  DEL PEAK 24(10P15.3) WILD-TYPE     77     61     90     21
D54V9, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           68                             77
  CLUS_2                           69                             61
  CLUS_3                           35                             90
  CLUS_4                           43                             21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       53     67     95
  DEL PEAK 24(10P15.3) WILD-TYPE     21    126    102
D54V10, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           53                             21
  CLUS_2                           67                            126
  CLUS_3                           95                            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       71     45     33
  DEL PEAK 24(10P15.3) WILD-TYPE     54     67     58
D54V11, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           71                             54
  CLUS_2                           45                             67
  CLUS_3                           33                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 24(10P15.3) MUTATED       26     16      6      9     15     26
  DEL PEAK 24(10P15.3) WILD-TYPE     27     18     22     17     23     33
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 24(10P15.3) MUTATED       25      9     17
  DEL PEAK 24(10P15.3) WILD-TYPE      6     12     21
D54V12, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           26                             27
  CLUS_2                           16                             18
  CLUS_3                            6                             22
  CLUS_4                            9                             17
  CLUS_5                           15                             23
  CLUS_6                           26                             33
  CLUS_7                           25                              6
  CLUS_8                            9                             12
  CLUS_9                           17                             21
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(55) Variable = DEL PEAK 25(10P15.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10P15.1) MUTATED       15     27     10     15
  DEL PEAK 25(10P15.1) WILD-TYPE     27     25     22     13
D55V1, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           15                             27
  CLUS_2                           27                             25
  CLUS_3                           10                             22
  CLUS_4                           15                             13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P15.1) MUTATED       18     28     21
  DEL PEAK 25(10P15.1) WILD-TYPE     29     28     30
D55V2, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           18                             29
  CLUS_2                           28                             28
  CLUS_3                           21                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P15.1) MUTATED       60     93     57
  DEL PEAK 25(10P15.1) WILD-TYPE    133     69     78
D55V3, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           60                            133
  CLUS_2                           93                             69
  CLUS_3                           57                             78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P15.1) MUTATED       44     80     32
  DEL PEAK 25(10P15.1) WILD-TYPE     98     34     68
D55V4, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           44                             98
  CLUS_2                           80                             34
  CLUS_3                           32                             68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P15.1) MUTATED       26     26     31
  DEL PEAK 25(10P15.1) WILD-TYPE     34     47     30
D55V5, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           26                             34
  CLUS_2                           26                             47
  CLUS_3                           31                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10P15.1) MUTATED       23     15     19     26
  DEL PEAK 25(10P15.1) WILD-TYPE     31     26     33     21
D55V6, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           23                             31
  CLUS_2                           15                             26
  CLUS_3                           19                             33
  CLUS_4                           26                             21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10P15.1) MUTATED       36     90     61     22
  DEL PEAK 25(10P15.1) WILD-TYPE     74     55     92     56
D55V7, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           36                             74
  CLUS_2                           90                             55
  CLUS_3                           61                             92
  CLUS_4                           22                             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P15.1) MUTATED       69     91     49
  DEL PEAK 25(10P15.1) WILD-TYPE    133     58     86
D55V8, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           69                            133
  CLUS_2                           91                             58
  CLUS_3                           49                             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10P15.1) MUTATED       66     63     31     43
  DEL PEAK 25(10P15.1) WILD-TYPE     79     67     94     21
D55V9, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           66                             79
  CLUS_2                           63                             67
  CLUS_3                           31                             94
  CLUS_4                           43                             21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P15.1) MUTATED       52     60     91
  DEL PEAK 25(10P15.1) WILD-TYPE     22    133    106
D55V10, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           52                             22
  CLUS_2                           60                            133
  CLUS_3                           91                            106
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P15.1) MUTATED       63     42     32
  DEL PEAK 25(10P15.1) WILD-TYPE     62     70     59
D55V11, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           63                             62
  CLUS_2                           42                             70
  CLUS_3                           32                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 25(10P15.1) MUTATED       24     14      5      9     12     24
  DEL PEAK 25(10P15.1) WILD-TYPE     29     20     23     17     26     35
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 25(10P15.1) MUTATED       23      9     17
  DEL PEAK 25(10P15.1) WILD-TYPE      8     12     21
D55V12, multiclass
        clus
vv       DEL PEAK 25(10P15.1) MUTATED DEL PEAK 25(10P15.1) WILD-TYPE
  CLUS_1                           24                             29
  CLUS_2                           14                             20
  CLUS_3                            5                             23
  CLUS_4                            9                             17
  CLUS_5                           12                             26
  CLUS_6                           24                             35
  CLUS_7                           23                              8
  CLUS_8                            9                             12
  CLUS_9                           17                             21
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(56) Variable = DEL PEAK 26(10Q23.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(10Q23.31) MUTATED       17     38     13     13
  DEL PEAK 26(10Q23.31) WILD-TYPE     25     14     19     15
D56V1, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            17                              25
  CLUS_2                            38                              14
  CLUS_3                            13                              19
  CLUS_4                            13                              15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q23.31) MUTATED       17     40     24
  DEL PEAK 26(10Q23.31) WILD-TYPE     30     16     27
D56V2, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            17                              30
  CLUS_2                            40                              16
  CLUS_3                            24                              27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q23.31) MUTATED       77    115     67
  DEL PEAK 26(10Q23.31) WILD-TYPE    116     47     68
D56V3, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            77                             116
  CLUS_2                           115                              47
  CLUS_3                            67                              68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q23.31) MUTATED       52     84     53
  DEL PEAK 26(10Q23.31) WILD-TYPE     90     30     47
D56V4, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            52                              90
  CLUS_2                            84                              30
  CLUS_3                            53                              47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q23.31) MUTATED       32     31     36
  DEL PEAK 26(10Q23.31) WILD-TYPE     28     42     25
D56V5, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            32                              28
  CLUS_2                            31                              42
  CLUS_3                            36                              25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(10Q23.31) MUTATED       25     20     24     30
  DEL PEAK 26(10Q23.31) WILD-TYPE     29     21     28     17
D56V6, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            25                              29
  CLUS_2                            20                              21
  CLUS_3                            24                              28
  CLUS_4                            30                              17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(10Q23.31) MUTATED       46    109     69     34
  DEL PEAK 26(10Q23.31) WILD-TYPE     64     36     84     44
D56V7, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            46                              64
  CLUS_2                           109                              36
  CLUS_3                            69                              84
  CLUS_4                            34                              44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q23.31) MUTATED       90    110     58
  DEL PEAK 26(10Q23.31) WILD-TYPE    112     39     77
D56V8, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            90                             112
  CLUS_2                           110                              39
  CLUS_3                            58                              77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(10Q23.31) MUTATED       68     79     53     45
  DEL PEAK 26(10Q23.31) WILD-TYPE     77     51     72     19
D56V9, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            68                              77
  CLUS_2                            79                              51
  CLUS_3                            53                              72
  CLUS_4                            45                              19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q23.31) MUTATED       54     82    109
  DEL PEAK 26(10Q23.31) WILD-TYPE     20    111     88
D56V10, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            54                              20
  CLUS_2                            82                             111
  CLUS_3                           109                              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q23.31) MUTATED       88     46     39
  DEL PEAK 26(10Q23.31) WILD-TYPE     37     66     52
D56V11, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            88                              37
  CLUS_2                            46                              66
  CLUS_3                            39                              52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 26(10Q23.31) MUTATED       24     16      9     12     22     28
  DEL PEAK 26(10Q23.31) WILD-TYPE     29     18     19     14     16     31
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 26(10Q23.31) MUTATED       25     11     26
  DEL PEAK 26(10Q23.31) WILD-TYPE      6     10     12
D56V12, multiclass
        clus
vv       DEL PEAK 26(10Q23.31) MUTATED DEL PEAK 26(10Q23.31) WILD-TYPE
  CLUS_1                            24                              29
  CLUS_2                            16                              18
  CLUS_3                             9                              19
  CLUS_4                            12                              14
  CLUS_5                            22                              16
  CLUS_6                            28                              31
  CLUS_7                            25                               6
  CLUS_8                            11                              10
  CLUS_9                            26                              12
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(57) Variable = DEL PEAK 27(11P15.5) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(11P15.5) MUTATED       30     21      9     18
  DEL PEAK 27(11P15.5) WILD-TYPE     12     31     23     10
D57V1, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           30                             12
  CLUS_2                           21                             31
  CLUS_3                            9                             23
  CLUS_4                           18                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11P15.5) MUTATED       32     22     24
  DEL PEAK 27(11P15.5) WILD-TYPE     15     34     27
D57V2, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           32                             15
  CLUS_2                           22                             34
  CLUS_3                           24                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11P15.5) MUTATED       67     82     90
  DEL PEAK 27(11P15.5) WILD-TYPE    126     80     45
D57V3, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           67                            126
  CLUS_2                           82                             80
  CLUS_3                           90                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11P15.5) MUTATED       55     55     60
  DEL PEAK 27(11P15.5) WILD-TYPE     87     59     40
D57V4, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           55                             87
  CLUS_2                           55                             59
  CLUS_3                           60                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11P15.5) MUTATED       33     46     18
  DEL PEAK 27(11P15.5) WILD-TYPE     27     27     43
D57V5, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           33                             27
  CLUS_2                           46                             27
  CLUS_3                           18                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(11P15.5) MUTATED       28     15     38     16
  DEL PEAK 27(11P15.5) WILD-TYPE     26     26     14     31
D57V6, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           28                             26
  CLUS_2                           15                             26
  CLUS_3                           38                             14
  CLUS_4                           16                             31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(11P15.5) MUTATED       62     64     84     28
  DEL PEAK 27(11P15.5) WILD-TYPE     48     81     69     50
D57V7, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           62                             48
  CLUS_2                           64                             81
  CLUS_3                           84                             69
  CLUS_4                           28                             50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11P15.5) MUTATED      109     64     65
  DEL PEAK 27(11P15.5) WILD-TYPE     93     85     70
D57V8, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                          109                             93
  CLUS_2                           64                             85
  CLUS_3                           65                             70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(11P15.5) MUTATED       82     69     54     25
  DEL PEAK 27(11P15.5) WILD-TYPE     63     61     71     39
D57V9, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           82                             63
  CLUS_2                           69                             61
  CLUS_3                           54                             71
  CLUS_4                           25                             39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11P15.5) MUTATED       34     91    105
  DEL PEAK 27(11P15.5) WILD-TYPE     40    102     92
D57V10, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           34                             40
  CLUS_2                           91                            102
  CLUS_3                          105                             92
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11P15.5) MUTATED       73     57     31
  DEL PEAK 27(11P15.5) WILD-TYPE     52     55     60
D57V11, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           73                             52
  CLUS_2                           57                             55
  CLUS_3                           31                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 27(11P15.5) MUTATED       26     22      6     12     23     21
  DEL PEAK 27(11P15.5) WILD-TYPE     27     12     22     14     15     38
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 27(11P15.5) MUTATED       15     14     22
  DEL PEAK 27(11P15.5) WILD-TYPE     16      7     16
D57V12, multiclass
        clus
vv       DEL PEAK 27(11P15.5) MUTATED DEL PEAK 27(11P15.5) WILD-TYPE
  CLUS_1                           26                             27
  CLUS_2                           22                             12
  CLUS_3                            6                             22
  CLUS_4                           12                             14
  CLUS_5                           23                             15
  CLUS_6                           21                             38
  CLUS_7                           15                             16
  CLUS_8                           14                              7
  CLUS_9                           22                             16
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(58) Variable = DEL PEAK 28(11Q22.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11Q22.1) MUTATED       10     18      8      6
  DEL PEAK 28(11Q22.1) WILD-TYPE     32     34     24     22
D58V1, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           10                             32
  CLUS_2                           18                             34
  CLUS_3                            8                             24
  CLUS_4                            6                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11Q22.1) MUTATED       13     19     10
  DEL PEAK 28(11Q22.1) WILD-TYPE     34     37     41
D58V2, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           13                             34
  CLUS_2                           19                             37
  CLUS_3                           10                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11Q22.1) MUTATED       42     66     50
  DEL PEAK 28(11Q22.1) WILD-TYPE    151     96     85
D58V3, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           42                            151
  CLUS_2                           66                             96
  CLUS_3                           50                             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11Q22.1) MUTATED       32     48     43
  DEL PEAK 28(11Q22.1) WILD-TYPE    110     66     57
D58V4, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           32                            110
  CLUS_2                           48                             66
  CLUS_3                           43                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11Q22.1) MUTATED       20     20     11
  DEL PEAK 28(11Q22.1) WILD-TYPE     40     53     50
D58V5, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           20                             40
  CLUS_2                           20                             53
  CLUS_3                           11                             50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11Q22.1) MUTATED       15     11     14     11
  DEL PEAK 28(11Q22.1) WILD-TYPE     39     30     38     36
D58V6, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           15                             39
  CLUS_2                           11                             30
  CLUS_3                           14                             38
  CLUS_4                           11                             36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11Q22.1) MUTATED       31     59     50     17
  DEL PEAK 28(11Q22.1) WILD-TYPE     79     86    103     61
D58V7, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           31                             79
  CLUS_2                           59                             86
  CLUS_3                           50                            103
  CLUS_4                           17                             61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11Q22.1) MUTATED       59     58     40
  DEL PEAK 28(11Q22.1) WILD-TYPE    143     91     95
D58V8, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           59                            143
  CLUS_2                           58                             91
  CLUS_3                           40                             95
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11Q22.1) MUTATED       39     57     30     26
  DEL PEAK 28(11Q22.1) WILD-TYPE    106     73     95     38
D58V9, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           39                            106
  CLUS_2                           57                             73
  CLUS_3                           30                             95
  CLUS_4                           26                             38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11Q22.1) MUTATED       28     61     63
  DEL PEAK 28(11Q22.1) WILD-TYPE     46    132    134
D58V10, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           28                             46
  CLUS_2                           61                            132
  CLUS_3                           63                            134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11Q22.1) MUTATED       55     31     27
  DEL PEAK 28(11Q22.1) WILD-TYPE     70     81     64
D58V11, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           55                             70
  CLUS_2                           31                             81
  CLUS_3                           27                             64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 28(11Q22.1) MUTATED       23     10      3      7     15     19
  DEL PEAK 28(11Q22.1) WILD-TYPE     30     24     25     19     23     40
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 28(11Q22.1) MUTATED       14      7     15
  DEL PEAK 28(11Q22.1) WILD-TYPE     17     14     23
D58V12, multiclass
        clus
vv       DEL PEAK 28(11Q22.1) MUTATED DEL PEAK 28(11Q22.1) WILD-TYPE
  CLUS_1                           23                             30
  CLUS_2                           10                             24
  CLUS_3                            3                             25
  CLUS_4                            7                             19
  CLUS_5                           15                             23
  CLUS_6                           19                             40
  CLUS_7                           14                             17
  CLUS_8                            7                             14
  CLUS_9                           15                             23
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(59) Variable = DEL PEAK 29(11Q25) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11Q25) MUTATED       13     21     11      9
  DEL PEAK 29(11Q25) WILD-TYPE     29     31     21     19
D59V1, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         13                           29
  CLUS_2                         21                           31
  CLUS_3                         11                           21
  CLUS_4                          9                           19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       16     22     16
  DEL PEAK 29(11Q25) WILD-TYPE     31     34     35
D59V2, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         16                           31
  CLUS_2                         22                           34
  CLUS_3                         16                           35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       54     75     53
  DEL PEAK 29(11Q25) WILD-TYPE    139     87     82
D59V3, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         54                          139
  CLUS_2                         75                           87
  CLUS_3                         53                           82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       43     50     42
  DEL PEAK 29(11Q25) WILD-TYPE     99     64     58
D59V4, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         43                           99
  CLUS_2                         50                           64
  CLUS_3                         42                           58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       25     22     16
  DEL PEAK 29(11Q25) WILD-TYPE     35     51     45
D59V5, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         25                           35
  CLUS_2                         22                           51
  CLUS_3                         16                           45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11Q25) MUTATED       21     12     15     15
  DEL PEAK 29(11Q25) WILD-TYPE     33     29     37     32
D59V6, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         21                           33
  CLUS_2                         12                           29
  CLUS_3                         15                           37
  CLUS_4                         15                           32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11Q25) MUTATED       34     64     63     20
  DEL PEAK 29(11Q25) WILD-TYPE     76     81     90     58
D59V7, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         34                           76
  CLUS_2                         64                           81
  CLUS_3                         63                           90
  CLUS_4                         20                           58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       67     63     51
  DEL PEAK 29(11Q25) WILD-TYPE    135     86     84
D59V8, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         67                          135
  CLUS_2                         63                           86
  CLUS_3                         51                           84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11Q25) MUTATED       43     61     39     27
  DEL PEAK 29(11Q25) WILD-TYPE    102     69     86     37
D59V9, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         43                          102
  CLUS_2                         61                           69
  CLUS_3                         39                           86
  CLUS_4                         27                           37
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       32     67     71
  DEL PEAK 29(11Q25) WILD-TYPE     42    126    126
D59V10, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         32                           42
  CLUS_2                         67                          126
  CLUS_3                         71                          126
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       58     38     29
  DEL PEAK 29(11Q25) WILD-TYPE     67     74     62
D59V11, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         58                           67
  CLUS_2                         38                           74
  CLUS_3                         29                           62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 29(11Q25) MUTATED       22     12      6     11     19     17     15
  DEL PEAK 29(11Q25) WILD-TYPE     31     22     22     15     19     42     16
                              vv
clus                           CLUS_8 CLUS_9
  DEL PEAK 29(11Q25) MUTATED        8     15
  DEL PEAK 29(11Q25) WILD-TYPE     13     23
D59V12, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         22                           31
  CLUS_2                         12                           22
  CLUS_3                          6                           22
  CLUS_4                         11                           15
  CLUS_5                         19                           19
  CLUS_6                         17                           42
  CLUS_7                         15                           16
  CLUS_8                          8                           13
  CLUS_9                         15                           23
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(60) Variable = DEL PEAK 30(12Q24.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q24.31) MUTATED        5      9      4      4
  DEL PEAK 30(12Q24.31) WILD-TYPE     37     43     28     24
D60V1, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                             5                              37
  CLUS_2                             9                              43
  CLUS_3                             4                              28
  CLUS_4                             4                              24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q24.31) MUTATED        5     10      7
  DEL PEAK 30(12Q24.31) WILD-TYPE     42     46     44
D60V2, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                             5                              42
  CLUS_2                            10                              46
  CLUS_3                             7                              44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q24.31) MUTATED       33     33     19
  DEL PEAK 30(12Q24.31) WILD-TYPE    160    129    116
D60V3, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                            33                             160
  CLUS_2                            33                             129
  CLUS_3                            19                             116
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q24.31) MUTATED       21     20     23
  DEL PEAK 30(12Q24.31) WILD-TYPE    121     94     77
D60V4, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                            21                             121
  CLUS_2                            20                              94
  CLUS_3                            23                              77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q24.31) MUTATED        5     10     12
  DEL PEAK 30(12Q24.31) WILD-TYPE     55     63     49
D60V5, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                             5                              55
  CLUS_2                            10                              63
  CLUS_3                            12                              49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q24.31) MUTATED        5      6      9      7
  DEL PEAK 30(12Q24.31) WILD-TYPE     49     35     43     40
D60V6, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                             5                              49
  CLUS_2                             6                              35
  CLUS_3                             9                              43
  CLUS_4                             7                              40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q24.31) MUTATED       22     27     25     11
  DEL PEAK 30(12Q24.31) WILD-TYPE     88    118    128     67
D60V7, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                            22                              88
  CLUS_2                            27                             118
  CLUS_3                            25                             128
  CLUS_4                            11                              67
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q24.31) MUTATED       35     28     22
  DEL PEAK 30(12Q24.31) WILD-TYPE    167    121    113
D60V8, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                            35                             167
  CLUS_2                            28                             121
  CLUS_3                            22                             113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q24.31) MUTATED       20     25     21     14
  DEL PEAK 30(12Q24.31) WILD-TYPE    125    105    104     50
D60V9, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                            20                             125
  CLUS_2                            25                             105
  CLUS_3                            21                             104
  CLUS_4                            14                              50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q24.31) MUTATED       11     28     41
  DEL PEAK 30(12Q24.31) WILD-TYPE     63    165    156
D60V10, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                            11                              63
  CLUS_2                            28                             165
  CLUS_3                            41                             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q24.31) MUTATED       28     21     14
  DEL PEAK 30(12Q24.31) WILD-TYPE     97     91     77
D60V11, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                            28                              97
  CLUS_2                            21                              91
  CLUS_3                            14                              77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 30(12Q24.31) MUTATED       11     10      2      5      3     13
  DEL PEAK 30(12Q24.31) WILD-TYPE     42     24     26     21     35     46
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 30(12Q24.31) MUTATED        6      2     11
  DEL PEAK 30(12Q24.31) WILD-TYPE     25     19     27
D60V12, multiclass
        clus
vv       DEL PEAK 30(12Q24.31) MUTATED DEL PEAK 30(12Q24.31) WILD-TYPE
  CLUS_1                            11                              42
  CLUS_2                            10                              24
  CLUS_3                             2                              26
  CLUS_4                             5                              21
  CLUS_5                             3                              35
  CLUS_6                            13                              46
  CLUS_7                             6                              25
  CLUS_8                             2                              19
  CLUS_9                            11                              27
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(61) Variable = DEL PEAK 31(13Q12.11) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(13Q12.11) MUTATED       25     36     25     14
  DEL PEAK 31(13Q12.11) WILD-TYPE     17     16      7     14
D61V1, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            25                              17
  CLUS_2                            36                              16
  CLUS_3                            25                               7
  CLUS_4                            14                              14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       28     39     33
  DEL PEAK 31(13Q12.11) WILD-TYPE     19     17     18
D61V2, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            28                              19
  CLUS_2                            39                              17
  CLUS_3                            33                              18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED      115    106    105
  DEL PEAK 31(13Q12.11) WILD-TYPE     78     56     30
D61V3, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                           115                              78
  CLUS_2                           106                              56
  CLUS_3                           105                              30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       85     78     72
  DEL PEAK 31(13Q12.11) WILD-TYPE     57     36     28
D61V4, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            85                              57
  CLUS_2                            78                              36
  CLUS_3                            72                              28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       40     49     43
  DEL PEAK 31(13Q12.11) WILD-TYPE     20     24     18
D61V5, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            40                              20
  CLUS_2                            49                              24
  CLUS_3                            43                              18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(13Q12.11) MUTATED       33     25     37     37
  DEL PEAK 31(13Q12.11) WILD-TYPE     21     16     15     10
D61V6, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            33                              21
  CLUS_2                            25                              16
  CLUS_3                            37                              15
  CLUS_4                            37                              10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(13Q12.11) MUTATED       72    100     98     54
  DEL PEAK 31(13Q12.11) WILD-TYPE     38     45     55     24
D61V7, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            72                              38
  CLUS_2                           100                              45
  CLUS_3                            98                              55
  CLUS_4                            54                              24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED      131    104     89
  DEL PEAK 31(13Q12.11) WILD-TYPE     71     45     46
D61V8, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                           131                              71
  CLUS_2                           104                              45
  CLUS_3                            89                              46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(13Q12.11) MUTATED       95     91     80     43
  DEL PEAK 31(13Q12.11) WILD-TYPE     50     39     45     21
D61V9, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            95                              50
  CLUS_2                            91                              39
  CLUS_3                            80                              45
  CLUS_4                            43                              21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       54    122    133
  DEL PEAK 31(13Q12.11) WILD-TYPE     20     71     64
D61V10, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            54                              20
  CLUS_2                           122                              71
  CLUS_3                           133                              64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       94     71     55
  DEL PEAK 31(13Q12.11) WILD-TYPE     31     41     36
D61V11, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            94                              31
  CLUS_2                            71                              41
  CLUS_3                            55                              36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 31(13Q12.11) MUTATED       38     21     12     18     30     38
  DEL PEAK 31(13Q12.11) WILD-TYPE     15     13     16      8      8     21
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 31(13Q12.11) MUTATED       26     11     26
  DEL PEAK 31(13Q12.11) WILD-TYPE      5     10     12
D61V12, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            38                              15
  CLUS_2                            21                              13
  CLUS_3                            12                              16
  CLUS_4                            18                               8
  CLUS_5                            30                               8
  CLUS_6                            38                              21
  CLUS_7                            26                               5
  CLUS_8                            11                              10
  CLUS_9                            26                              12
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(62) Variable = DEL PEAK 32(13Q14.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       28     31     27     19
  DEL PEAK 32(13Q14.2) WILD-TYPE     14     21      5      9
D62V1, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           28                             14
  CLUS_2                           31                             21
  CLUS_3                           27                              5
  CLUS_4                           19                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       32     33     40
  DEL PEAK 32(13Q14.2) WILD-TYPE     15     23     11
D62V2, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           32                             15
  CLUS_2                           33                             23
  CLUS_3                           40                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED      119    109    109
  DEL PEAK 32(13Q14.2) WILD-TYPE     74     53     26
D62V3, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                          119                             74
  CLUS_2                          109                             53
  CLUS_3                          109                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       84     83     74
  DEL PEAK 32(13Q14.2) WILD-TYPE     58     31     26
D62V4, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           84                             58
  CLUS_2                           83                             31
  CLUS_3                           74                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       43     49     45
  DEL PEAK 32(13Q14.2) WILD-TYPE     17     24     16
D62V5, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           43                             17
  CLUS_2                           49                             24
  CLUS_3                           45                             16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       36     28     37     36
  DEL PEAK 32(13Q14.2) WILD-TYPE     18     13     15     11
D62V6, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           36                             18
  CLUS_2                           28                             13
  CLUS_3                           37                             15
  CLUS_4                           36                             11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       70     99    108     57
  DEL PEAK 32(13Q14.2) WILD-TYPE     40     46     45     21
D62V7, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           70                             40
  CLUS_2                           99                             46
  CLUS_3                          108                             45
  CLUS_4                           57                             21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED      134    103     97
  DEL PEAK 32(13Q14.2) WILD-TYPE     68     46     38
D62V8, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                          134                             68
  CLUS_2                          103                             46
  CLUS_3                           97                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       96     98     79     45
  DEL PEAK 32(13Q14.2) WILD-TYPE     49     32     46     19
D62V9, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           96                             49
  CLUS_2                           98                             32
  CLUS_3                           79                             46
  CLUS_4                           45                             19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       53    123    142
  DEL PEAK 32(13Q14.2) WILD-TYPE     21     70     55
D62V10, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           53                             21
  CLUS_2                          123                             70
  CLUS_3                          142                             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       99     72     55
  DEL PEAK 32(13Q14.2) WILD-TYPE     26     40     36
D62V11, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           99                             26
  CLUS_2                           72                             40
  CLUS_3                           55                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 32(13Q14.2) MUTATED       37     21     12     18     32     38
  DEL PEAK 32(13Q14.2) WILD-TYPE     16     13     16      8      6     21
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 32(13Q14.2) MUTATED       23     15     30
  DEL PEAK 32(13Q14.2) WILD-TYPE      8      6      8
D62V12, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           37                             16
  CLUS_2                           21                             13
  CLUS_3                           12                             16
  CLUS_4                           18                              8
  CLUS_5                           32                              6
  CLUS_6                           38                             21
  CLUS_7                           23                              8
  CLUS_8                           15                              6
  CLUS_9                           30                              8
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(63) Variable = DEL PEAK 33(14Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(14Q11.2) MUTATED        7     21     14     10
  DEL PEAK 33(14Q11.2) WILD-TYPE     35     31     18     18
D63V1, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                            7                             35
  CLUS_2                           21                             31
  CLUS_3                           14                             18
  CLUS_4                           10                             18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(14Q11.2) MUTATED        9     22     21
  DEL PEAK 33(14Q11.2) WILD-TYPE     38     34     30
D63V2, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                            9                             38
  CLUS_2                           22                             34
  CLUS_3                           21                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(14Q11.2) MUTATED       62     60     49
  DEL PEAK 33(14Q11.2) WILD-TYPE    131    102     86
D63V3, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           62                            131
  CLUS_2                           60                            102
  CLUS_3                           49                             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(14Q11.2) MUTATED       50     41     35
  DEL PEAK 33(14Q11.2) WILD-TYPE     92     73     65
D63V4, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           50                             92
  CLUS_2                           41                             73
  CLUS_3                           35                             65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(14Q11.2) MUTATED       27     23     25
  DEL PEAK 33(14Q11.2) WILD-TYPE     33     50     36
D63V5, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           27                             33
  CLUS_2                           23                             50
  CLUS_3                           25                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(14Q11.2) MUTATED       27     16     15     17
  DEL PEAK 33(14Q11.2) WILD-TYPE     27     25     37     30
D63V6, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           27                             27
  CLUS_2                           16                             25
  CLUS_3                           15                             37
  CLUS_4                           17                             30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(14Q11.2) MUTATED       23     54     73     19
  DEL PEAK 33(14Q11.2) WILD-TYPE     87     91     80     59
D63V7, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           23                             87
  CLUS_2                           54                             91
  CLUS_3                           73                             80
  CLUS_4                           19                             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(14Q11.2) MUTATED       52     55     62
  DEL PEAK 33(14Q11.2) WILD-TYPE    150     94     73
D63V8, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           52                            150
  CLUS_2                           55                             94
  CLUS_3                           62                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(14Q11.2) MUTATED       52     41     35     34
  DEL PEAK 33(14Q11.2) WILD-TYPE     93     89     90     30
D63V9, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           52                             93
  CLUS_2                           41                             89
  CLUS_3                           35                             90
  CLUS_4                           34                             30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(14Q11.2) MUTATED       35     58     69
  DEL PEAK 33(14Q11.2) WILD-TYPE     39    135    128
D63V10, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           35                             39
  CLUS_2                           58                            135
  CLUS_3                           69                            128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(14Q11.2) MUTATED       44     36     37
  DEL PEAK 33(14Q11.2) WILD-TYPE     81     76     54
D63V11, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           44                             81
  CLUS_2                           36                             76
  CLUS_3                           37                             54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 33(14Q11.2) MUTATED       14      7      5      8     22     27
  DEL PEAK 33(14Q11.2) WILD-TYPE     39     27     23     18     16     32
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 33(14Q11.2) MUTATED       16      6     12
  DEL PEAK 33(14Q11.2) WILD-TYPE     15     15     26
D63V12, multiclass
        clus
vv       DEL PEAK 33(14Q11.2) MUTATED DEL PEAK 33(14Q11.2) WILD-TYPE
  CLUS_1                           14                             39
  CLUS_2                            7                             27
  CLUS_3                            5                             23
  CLUS_4                            8                             18
  CLUS_5                           22                             16
  CLUS_6                           27                             32
  CLUS_7                           16                             15
  CLUS_8                            6                             15
  CLUS_9                           12                             26
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(64) Variable = DEL PEAK 34(15Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(15Q12) MUTATED       15     21     13     14
  DEL PEAK 34(15Q12) WILD-TYPE     27     31     19     14
D64V1, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         15                           27
  CLUS_2                         21                           31
  CLUS_3                         13                           19
  CLUS_4                         14                           14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(15Q12) MUTATED       16     24     23
  DEL PEAK 34(15Q12) WILD-TYPE     31     32     28
D64V2, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         16                           31
  CLUS_2                         24                           32
  CLUS_3                         23                           28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(15Q12) MUTATED       56     64     49
  DEL PEAK 34(15Q12) WILD-TYPE    137     98     86
D64V3, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         56                          137
  CLUS_2                         64                           98
  CLUS_3                         49                           86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(15Q12) MUTATED       44     32     40
  DEL PEAK 34(15Q12) WILD-TYPE     98     82     60
D64V4, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         44                           98
  CLUS_2                         32                           82
  CLUS_3                         40                           60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(15Q12) MUTATED       29     25     16
  DEL PEAK 34(15Q12) WILD-TYPE     31     48     45
D64V5, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         29                           31
  CLUS_2                         25                           48
  CLUS_3                         16                           45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(15Q12) MUTATED       23      7     21     19
  DEL PEAK 34(15Q12) WILD-TYPE     31     34     31     28
D64V6, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         23                           31
  CLUS_2                          7                           34
  CLUS_3                         21                           31
  CLUS_4                         19                           28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(15Q12) MUTATED       35     45     64     24
  DEL PEAK 34(15Q12) WILD-TYPE     75    100     89     54
D64V7, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         35                           75
  CLUS_2                         45                          100
  CLUS_3                         64                           89
  CLUS_4                         24                           54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(15Q12) MUTATED       71     43     54
  DEL PEAK 34(15Q12) WILD-TYPE    131    106     81
D64V8, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         71                          131
  CLUS_2                         43                          106
  CLUS_3                         54                           81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(15Q12) MUTATED       61     51     31     18
  DEL PEAK 34(15Q12) WILD-TYPE     84     79     94     46
D64V9, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         61                           84
  CLUS_2                         51                           79
  CLUS_3                         31                           94
  CLUS_4                         18                           46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(15Q12) MUTATED       26     62     73
  DEL PEAK 34(15Q12) WILD-TYPE     48    131    124
D64V10, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         26                           48
  CLUS_2                         62                          131
  CLUS_3                         73                          124
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(15Q12) MUTATED       44     37     23
  DEL PEAK 34(15Q12) WILD-TYPE     81     75     68
D64V11, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         44                           81
  CLUS_2                         37                           75
  CLUS_3                         23                           68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 34(15Q12) MUTATED       16      9      5      9     16     17      8
  DEL PEAK 34(15Q12) WILD-TYPE     37     25     23     17     22     42     23
                              vv
clus                           CLUS_8 CLUS_9
  DEL PEAK 34(15Q12) MUTATED        8     16
  DEL PEAK 34(15Q12) WILD-TYPE     13     22
D64V12, multiclass
        clus
vv       DEL PEAK 34(15Q12) MUTATED DEL PEAK 34(15Q12) WILD-TYPE
  CLUS_1                         16                           37
  CLUS_2                          9                           25
  CLUS_3                          5                           23
  CLUS_4                          9                           17
  CLUS_5                         16                           22
  CLUS_6                         17                           42
  CLUS_7                          8                           23
  CLUS_8                          8                           13
  CLUS_9                         16                           22
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(65) Variable = DEL PEAK 35(15Q21.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(15Q21.1) MUTATED       14     17     12     14
  DEL PEAK 35(15Q21.1) WILD-TYPE     28     35     20     14
D65V1, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           14                             28
  CLUS_2                           17                             35
  CLUS_3                           12                             20
  CLUS_4                           14                             14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q21.1) MUTATED       16     20     21
  DEL PEAK 35(15Q21.1) WILD-TYPE     31     36     30
D65V2, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           16                             31
  CLUS_2                           20                             36
  CLUS_3                           21                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q21.1) MUTATED       50     60     52
  DEL PEAK 35(15Q21.1) WILD-TYPE    143    102     83
D65V3, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           50                            143
  CLUS_2                           60                            102
  CLUS_3                           52                             83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q21.1) MUTATED       40     36     39
  DEL PEAK 35(15Q21.1) WILD-TYPE    102     78     61
D65V4, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           40                            102
  CLUS_2                           36                             78
  CLUS_3                           39                             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q21.1) MUTATED       26     24     15
  DEL PEAK 35(15Q21.1) WILD-TYPE     34     49     46
D65V5, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           26                             34
  CLUS_2                           24                             49
  CLUS_3                           15                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(15Q21.1) MUTATED       23      5     20     17
  DEL PEAK 35(15Q21.1) WILD-TYPE     31     36     32     30
D65V6, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           23                             31
  CLUS_2                            5                             36
  CLUS_3                           20                             32
  CLUS_4                           17                             30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(15Q21.1) MUTATED       34     44     61     22
  DEL PEAK 35(15Q21.1) WILD-TYPE     76    101     92     56
D65V7, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           34                             76
  CLUS_2                           44                            101
  CLUS_3                           61                             92
  CLUS_4                           22                             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q21.1) MUTATED       67     44     50
  DEL PEAK 35(15Q21.1) WILD-TYPE    135    105     85
D65V8, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           67                            135
  CLUS_2                           44                            105
  CLUS_3                           50                             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(15Q21.1) MUTATED       54     54     27     18
  DEL PEAK 35(15Q21.1) WILD-TYPE     91     76     98     46
D65V9, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           54                             91
  CLUS_2                           54                             76
  CLUS_3                           27                             98
  CLUS_4                           18                             46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q21.1) MUTATED       23     55     75
  DEL PEAK 35(15Q21.1) WILD-TYPE     51    138    122
D65V10, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           23                             51
  CLUS_2                           55                            138
  CLUS_3                           75                            122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q21.1) MUTATED       45     37     21
  DEL PEAK 35(15Q21.1) WILD-TYPE     80     75     70
D65V11, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           45                             80
  CLUS_2                           37                             75
  CLUS_3                           21                             70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 35(15Q21.1) MUTATED       15      9      1     11     14     19
  DEL PEAK 35(15Q21.1) WILD-TYPE     38     25     27     15     24     40
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 35(15Q21.1) MUTATED        9      9     16
  DEL PEAK 35(15Q21.1) WILD-TYPE     22     12     22
D65V12, multiclass
        clus
vv       DEL PEAK 35(15Q21.1) MUTATED DEL PEAK 35(15Q21.1) WILD-TYPE
  CLUS_1                           15                             38
  CLUS_2                            9                             25
  CLUS_3                            1                             27
  CLUS_4                           11                             15
  CLUS_5                           14                             24
  CLUS_6                           19                             40
  CLUS_7                            9                             22
  CLUS_8                            9                             12
  CLUS_9                           16                             22
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(66) Variable = DEL PEAK 36(16P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(16P13.3) MUTATED       17     22      7     10
  DEL PEAK 36(16P13.3) WILD-TYPE     25     30     25     18
D66V1, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           17                             25
  CLUS_2                           22                             30
  CLUS_3                            7                             25
  CLUS_4                           10                             18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       19     22     15
  DEL PEAK 36(16P13.3) WILD-TYPE     28     34     36
D66V2, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           19                             28
  CLUS_2                           22                             34
  CLUS_3                           15                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       53     66     62
  DEL PEAK 36(16P13.3) WILD-TYPE    140     96     73
D66V3, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           53                            140
  CLUS_2                           66                             96
  CLUS_3                           62                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       43     48     44
  DEL PEAK 36(16P13.3) WILD-TYPE     99     66     56
D66V4, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           43                             99
  CLUS_2                           48                             66
  CLUS_3                           44                             56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       26     26     17
  DEL PEAK 36(16P13.3) WILD-TYPE     34     47     44
D66V5, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           26                             34
  CLUS_2                           26                             47
  CLUS_3                           17                             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(16P13.3) MUTATED       23     13     21     12
  DEL PEAK 36(16P13.3) WILD-TYPE     31     28     31     35
D66V6, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           23                             31
  CLUS_2                           13                             28
  CLUS_3                           21                             31
  CLUS_4                           12                             35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(16P13.3) MUTATED       38     58     59     25
  DEL PEAK 36(16P13.3) WILD-TYPE     72     87     94     53
D66V7, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           38                             72
  CLUS_2                           58                             87
  CLUS_3                           59                             94
  CLUS_4                           25                             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       69     58     53
  DEL PEAK 36(16P13.3) WILD-TYPE    133     91     82
D66V8, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           69                            133
  CLUS_2                           58                             91
  CLUS_3                           53                             82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(16P13.3) MUTATED       45     59     38     29
  DEL PEAK 36(16P13.3) WILD-TYPE    100     71     87     35
D66V9, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           45                            100
  CLUS_2                           59                             71
  CLUS_3                           38                             87
  CLUS_4                           29                             35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       29     65     77
  DEL PEAK 36(16P13.3) WILD-TYPE     45    128    120
D66V10, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           29                             45
  CLUS_2                           65                            128
  CLUS_3                           77                            120
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       55     35     31
  DEL PEAK 36(16P13.3) WILD-TYPE     70     77     60
D66V11, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           55                             70
  CLUS_2                           35                             77
  CLUS_3                           31                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 36(16P13.3) MUTATED       16      8      7     11     19     23
  DEL PEAK 36(16P13.3) WILD-TYPE     37     26     21     15     19     36
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 36(16P13.3) MUTATED       13      7     17
  DEL PEAK 36(16P13.3) WILD-TYPE     18     14     21
D66V12, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           16                             37
  CLUS_2                            8                             26
  CLUS_3                            7                             21
  CLUS_4                           11                             15
  CLUS_5                           19                             19
  CLUS_6                           23                             36
  CLUS_7                           13                             18
  CLUS_8                            7                             14
  CLUS_9                           17                             21
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(67) Variable = DEL PEAK 37(16Q23.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(16Q23.1) MUTATED       16     23     12     11
  DEL PEAK 37(16Q23.1) WILD-TYPE     26     29     20     17
D67V1, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           16                             26
  CLUS_2                           23                             29
  CLUS_3                           12                             20
  CLUS_4                           11                             17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       13     26     23
  DEL PEAK 37(16Q23.1) WILD-TYPE     34     30     28
D67V2, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           13                             34
  CLUS_2                           26                             30
  CLUS_3                           23                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       63     77     64
  DEL PEAK 37(16Q23.1) WILD-TYPE    130     85     71
D67V3, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           63                            130
  CLUS_2                           77                             85
  CLUS_3                           64                             71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       52     47     48
  DEL PEAK 37(16Q23.1) WILD-TYPE     90     67     52
D67V4, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           52                             90
  CLUS_2                           47                             67
  CLUS_3                           48                             52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       29     27     23
  DEL PEAK 37(16Q23.1) WILD-TYPE     31     46     38
D67V5, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           29                             31
  CLUS_2                           27                             46
  CLUS_3                           23                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(16Q23.1) MUTATED       24     16     19     20
  DEL PEAK 37(16Q23.1) WILD-TYPE     30     25     33     27
D67V6, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           24                             30
  CLUS_2                           16                             25
  CLUS_3                           19                             33
  CLUS_4                           20                             27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(16Q23.1) MUTATED       39     67     71     25
  DEL PEAK 37(16Q23.1) WILD-TYPE     71     78     82     53
D67V7, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           39                             71
  CLUS_2                           67                             78
  CLUS_3                           71                             82
  CLUS_4                           25                             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       72     69     61
  DEL PEAK 37(16Q23.1) WILD-TYPE    130     80     74
D67V8, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           72                            130
  CLUS_2                           69                             80
  CLUS_3                           61                             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(16Q23.1) MUTATED       60     62     40     33
  DEL PEAK 37(16Q23.1) WILD-TYPE     85     68     85     31
D67V9, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           60                             85
  CLUS_2                           62                             68
  CLUS_3                           40                             85
  CLUS_4                           33                             31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       35     75     85
  DEL PEAK 37(16Q23.1) WILD-TYPE     39    118    112
D67V10, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           35                             39
  CLUS_2                           75                            118
  CLUS_3                           85                            112
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       67     32     39
  DEL PEAK 37(16Q23.1) WILD-TYPE     58     80     52
D67V11, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           67                             58
  CLUS_2                           32                             80
  CLUS_3                           39                             52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 37(16Q23.1) MUTATED       20      7      6     10     28     29
  DEL PEAK 37(16Q23.1) WILD-TYPE     33     27     22     16     10     30
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 37(16Q23.1) MUTATED       14      6     18
  DEL PEAK 37(16Q23.1) WILD-TYPE     17     15     20
D67V12, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           20                             33
  CLUS_2                            7                             27
  CLUS_3                            6                             22
  CLUS_4                           10                             16
  CLUS_5                           28                             10
  CLUS_6                           29                             30
  CLUS_7                           14                             17
  CLUS_8                            6                             15
  CLUS_9                           18                             20
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(68) Variable = DEL PEAK 38(17Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(17Q11.2) MUTATED       21      5     11      6
  DEL PEAK 38(17Q11.2) WILD-TYPE     21     47     21     22
D68V1, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           21                             21
  CLUS_2                            5                             47
  CLUS_3                           11                             21
  CLUS_4                            6                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17Q11.2) MUTATED       21      5     17
  DEL PEAK 38(17Q11.2) WILD-TYPE     26     51     34
D68V2, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           21                             26
  CLUS_2                            5                             51
  CLUS_3                           17                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17Q11.2) MUTATED       58     20     50
  DEL PEAK 38(17Q11.2) WILD-TYPE    135    142     85
D68V3, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           58                            135
  CLUS_2                           20                            142
  CLUS_3                           50                             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17Q11.2) MUTATED       47     11     30
  DEL PEAK 38(17Q11.2) WILD-TYPE     95    103     70
D68V4, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           47                             95
  CLUS_2                           11                            103
  CLUS_3                           30                             70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17Q11.2) MUTATED       11     21     15
  DEL PEAK 38(17Q11.2) WILD-TYPE     49     52     46
D68V5, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           11                             49
  CLUS_2                           21                             52
  CLUS_3                           15                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(17Q11.2) MUTATED       14     10     15      8
  DEL PEAK 38(17Q11.2) WILD-TYPE     40     31     37     39
D68V6, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           14                             40
  CLUS_2                           10                             31
  CLUS_3                           15                             37
  CLUS_4                            8                             39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(17Q11.2) MUTATED       41     12     49     25
  DEL PEAK 38(17Q11.2) WILD-TYPE     69    133    104     53
D68V7, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           41                             69
  CLUS_2                           12                            133
  CLUS_3                           49                            104
  CLUS_4                           25                             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17Q11.2) MUTATED       78     13     36
  DEL PEAK 38(17Q11.2) WILD-TYPE    124    136     99
D68V8, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           78                            124
  CLUS_2                           13                            136
  CLUS_3                           36                             99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(17Q11.2) MUTATED       40     33     40     11
  DEL PEAK 38(17Q11.2) WILD-TYPE    105     97     85     53
D68V9, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           40                            105
  CLUS_2                           33                             97
  CLUS_3                           40                             85
  CLUS_4                           11                             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17Q11.2) MUTATED        9     55     60
  DEL PEAK 38(17Q11.2) WILD-TYPE     65    138    137
D68V10, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                            9                             65
  CLUS_2                           55                            138
  CLUS_3                           60                            137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17Q11.2) MUTATED       22     38     24
  DEL PEAK 38(17Q11.2) WILD-TYPE    103     74     67
D68V11, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           22                            103
  CLUS_2                           38                             74
  CLUS_3                           24                             67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 38(17Q11.2) MUTATED       14     13      8     10      7     18
  DEL PEAK 38(17Q11.2) WILD-TYPE     39     21     20     16     31     41
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 38(17Q11.2) MUTATED        3      4      7
  DEL PEAK 38(17Q11.2) WILD-TYPE     28     17     31
D68V12, multiclass
        clus
vv       DEL PEAK 38(17Q11.2) MUTATED DEL PEAK 38(17Q11.2) WILD-TYPE
  CLUS_1                           14                             39
  CLUS_2                           13                             21
  CLUS_3                            8                             20
  CLUS_4                           10                             16
  CLUS_5                            7                             31
  CLUS_6                           18                             41
  CLUS_7                            3                             28
  CLUS_8                            4                             17
  CLUS_9                            7                             31
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(69) Variable = DEL PEAK 39(17Q25.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(17Q25.3) MUTATED       16      5      7      3
  DEL PEAK 39(17Q25.3) WILD-TYPE     26     47     25     25
D69V1, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           16                             26
  CLUS_2                            5                             47
  CLUS_3                            7                             25
  CLUS_4                            3                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED       15      5     11
  DEL PEAK 39(17Q25.3) WILD-TYPE     32     51     40
D69V2, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           15                             32
  CLUS_2                            5                             51
  CLUS_3                           11                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED       45     19     36
  DEL PEAK 39(17Q25.3) WILD-TYPE    148    143     99
D69V3, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           45                            148
  CLUS_2                           19                            143
  CLUS_3                           36                             99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED       33     14     25
  DEL PEAK 39(17Q25.3) WILD-TYPE    109    100     75
D69V4, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           33                            109
  CLUS_2                           14                            100
  CLUS_3                           25                             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED       12     17     10
  DEL PEAK 39(17Q25.3) WILD-TYPE     48     56     51
D69V5, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           12                             48
  CLUS_2                           17                             56
  CLUS_3                           10                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(17Q25.3) MUTATED       11      8     10     10
  DEL PEAK 39(17Q25.3) WILD-TYPE     43     33     42     37
D69V6, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           11                             43
  CLUS_2                            8                             33
  CLUS_3                           10                             42
  CLUS_4                           10                             37
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(17Q25.3) MUTATED       33     18     35     14
  DEL PEAK 39(17Q25.3) WILD-TYPE     77    127    118     64
D69V7, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           33                             77
  CLUS_2                           18                            127
  CLUS_3                           35                            118
  CLUS_4                           14                             64
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED       57     18     25
  DEL PEAK 39(17Q25.3) WILD-TYPE    145    131    110
D69V8, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           57                            145
  CLUS_2                           18                            131
  CLUS_3                           25                            110
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(17Q25.3) MUTATED       29     27     29     12
  DEL PEAK 39(17Q25.3) WILD-TYPE    116    103     96     52
D69V9, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           29                            116
  CLUS_2                           27                            103
  CLUS_3                           29                             96
  CLUS_4                           12                             52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED        8     45     44
  DEL PEAK 39(17Q25.3) WILD-TYPE     66    148    153
D69V10, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                            8                             66
  CLUS_2                           45                            148
  CLUS_3                           44                            153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED       24     28     16
  DEL PEAK 39(17Q25.3) WILD-TYPE    101     84     75
D69V11, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           24                            101
  CLUS_2                           28                             84
  CLUS_3                           16                             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 39(17Q25.3) MUTATED       13      8      5      2      6     17
  DEL PEAK 39(17Q25.3) WILD-TYPE     40     26     23     24     32     42
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 39(17Q25.3) MUTATED        4      7      6
  DEL PEAK 39(17Q25.3) WILD-TYPE     27     14     32
D69V12, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           13                             40
  CLUS_2                            8                             26
  CLUS_3                            5                             23
  CLUS_4                            2                             24
  CLUS_5                            6                             32
  CLUS_6                           17                             42
  CLUS_7                            4                             27
  CLUS_8                            7                             14
  CLUS_9                            6                             32
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(70) Variable = DEL PEAK 40(18Q23) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(18Q23) MUTATED       23     23     14     11
  DEL PEAK 40(18Q23) WILD-TYPE     19     29     18     17
D70V1, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         23                           19
  CLUS_2                         23                           29
  CLUS_3                         14                           18
  CLUS_4                         11                           17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18Q23) MUTATED       27     24     20
  DEL PEAK 40(18Q23) WILD-TYPE     20     32     31
D70V2, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         27                           20
  CLUS_2                         24                           32
  CLUS_3                         20                           31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18Q23) MUTATED       74     82     71
  DEL PEAK 40(18Q23) WILD-TYPE    119     80     64
D70V3, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         74                          119
  CLUS_2                         82                           80
  CLUS_3                         71                           64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18Q23) MUTATED       63     62     44
  DEL PEAK 40(18Q23) WILD-TYPE     79     52     56
D70V4, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         63                           79
  CLUS_2                         62                           52
  CLUS_3                         44                           56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18Q23) MUTATED       26     34     29
  DEL PEAK 40(18Q23) WILD-TYPE     34     39     32
D70V5, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         26                           34
  CLUS_2                         34                           39
  CLUS_3                         29                           32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(18Q23) MUTATED       21     15     28     25
  DEL PEAK 40(18Q23) WILD-TYPE     33     26     24     22
D70V6, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         21                           33
  CLUS_2                         15                           26
  CLUS_3                         28                           24
  CLUS_4                         25                           22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(18Q23) MUTATED       52     70     69     34
  DEL PEAK 40(18Q23) WILD-TYPE     58     75     84     44
D70V7, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         52                           58
  CLUS_2                         70                           75
  CLUS_3                         69                           84
  CLUS_4                         34                           44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18Q23) MUTATED       98     68     59
  DEL PEAK 40(18Q23) WILD-TYPE    104     81     76
D70V8, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         98                          104
  CLUS_2                         68                           81
  CLUS_3                         59                           76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(18Q23) MUTATED       68     70     52     26
  DEL PEAK 40(18Q23) WILD-TYPE     77     60     73     38
D70V9, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         68                           77
  CLUS_2                         70                           60
  CLUS_3                         52                           73
  CLUS_4                         26                           38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18Q23) MUTATED       36     86     94
  DEL PEAK 40(18Q23) WILD-TYPE     38    107    103
D70V10, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         36                           38
  CLUS_2                         86                          107
  CLUS_3                         94                          103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18Q23) MUTATED       62     58     33
  DEL PEAK 40(18Q23) WILD-TYPE     63     54     58
D70V11, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         62                           63
  CLUS_2                         58                           54
  CLUS_3                         33                           58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 40(18Q23) MUTATED       31     16      8     16     13     29     15
  DEL PEAK 40(18Q23) WILD-TYPE     22     18     20     10     25     30     16
                              vv
clus                           CLUS_8 CLUS_9
  DEL PEAK 40(18Q23) MUTATED        7     18
  DEL PEAK 40(18Q23) WILD-TYPE     14     20
D70V12, multiclass
        clus
vv       DEL PEAK 40(18Q23) MUTATED DEL PEAK 40(18Q23) WILD-TYPE
  CLUS_1                         31                           22
  CLUS_2                         16                           18
  CLUS_3                          8                           20
  CLUS_4                         16                           10
  CLUS_5                         13                           25
  CLUS_6                         29                           30
  CLUS_7                         15                           16
  CLUS_8                          7                           14
  CLUS_9                         18                           20
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(71) Variable = DEL PEAK 41(19P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(19P13.3) MUTATED       20     24     17     18
  DEL PEAK 41(19P13.3) WILD-TYPE     22     28     15     10
D71V1, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           20                             22
  CLUS_2                           24                             28
  CLUS_3                           17                             15
  CLUS_4                           18                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(19P13.3) MUTATED       23     25     31
  DEL PEAK 41(19P13.3) WILD-TYPE     24     31     20
D71V2, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           23                             24
  CLUS_2                           25                             31
  CLUS_3                           31                             20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(19P13.3) MUTATED       71     76     82
  DEL PEAK 41(19P13.3) WILD-TYPE    122     86     53
D71V3, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           71                            122
  CLUS_2                           76                             86
  CLUS_3                           82                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(19P13.3) MUTATED       61     53     47
  DEL PEAK 41(19P13.3) WILD-TYPE     81     61     53
D71V4, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           61                             81
  CLUS_2                           53                             61
  CLUS_3                           47                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(19P13.3) MUTATED       31     41     23
  DEL PEAK 41(19P13.3) WILD-TYPE     29     32     38
D71V5, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           31                             29
  CLUS_2                           41                             32
  CLUS_3                           23                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(19P13.3) MUTATED       23     17     32     23
  DEL PEAK 41(19P13.3) WILD-TYPE     31     24     20     24
D71V6, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           23                             31
  CLUS_2                           17                             24
  CLUS_3                           32                             20
  CLUS_4                           23                             24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(19P13.3) MUTATED       54     57     80     37
  DEL PEAK 41(19P13.3) WILD-TYPE     56     88     73     41
D71V7, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           54                             56
  CLUS_2                           57                             88
  CLUS_3                           80                             73
  CLUS_4                           37                             41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(19P13.3) MUTATED       92     59     77
  DEL PEAK 41(19P13.3) WILD-TYPE    110     90     58
D71V8, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           92                            110
  CLUS_2                           59                             90
  CLUS_3                           77                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(19P13.3) MUTATED       74     69     51     23
  DEL PEAK 41(19P13.3) WILD-TYPE     71     61     74     41
D71V9, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           74                             71
  CLUS_2                           69                             61
  CLUS_3                           51                             74
  CLUS_4                           23                             41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(19P13.3) MUTATED       23     85    109
  DEL PEAK 41(19P13.3) WILD-TYPE     51    108     88
D71V10, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           23                             51
  CLUS_2                           85                            108
  CLUS_3                          109                             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(19P13.3) MUTATED       60     53     35
  DEL PEAK 41(19P13.3) WILD-TYPE     65     59     56
D71V11, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           60                             65
  CLUS_2                           53                             59
  CLUS_3                           35                             56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 41(19P13.3) MUTATED       27     20      9      8     20     27
  DEL PEAK 41(19P13.3) WILD-TYPE     26     14     19     18     18     32
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 41(19P13.3) MUTATED       11      7     19
  DEL PEAK 41(19P13.3) WILD-TYPE     20     14     19
D71V12, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           27                             26
  CLUS_2                           20                             14
  CLUS_3                            9                             19
  CLUS_4                            8                             18
  CLUS_5                           20                             18
  CLUS_6                           27                             32
  CLUS_7                           11                             20
  CLUS_8                            7                             14
  CLUS_9                           19                             19
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(72) Variable = DEL PEAK 42(19Q13.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(19Q13.32) MUTATED       11     18      9      9
  DEL PEAK 42(19Q13.32) WILD-TYPE     31     34     23     19
D72V1, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            11                              31
  CLUS_2                            18                              34
  CLUS_3                             9                              23
  CLUS_4                             9                              19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(19Q13.32) MUTATED       13     20     14
  DEL PEAK 42(19Q13.32) WILD-TYPE     34     36     37
D72V2, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            13                              34
  CLUS_2                            20                              36
  CLUS_3                            14                              37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(19Q13.32) MUTATED       32     72     39
  DEL PEAK 42(19Q13.32) WILD-TYPE    161     90     96
D72V3, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            32                             161
  CLUS_2                            72                              90
  CLUS_3                            39                              96
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(19Q13.32) MUTATED       21     43     37
  DEL PEAK 42(19Q13.32) WILD-TYPE    121     71     63
D72V4, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            21                             121
  CLUS_2                            43                              71
  CLUS_3                            37                              63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(19Q13.32) MUTATED       21     15     18
  DEL PEAK 42(19Q13.32) WILD-TYPE     39     58     43
D72V5, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            21                              39
  CLUS_2                            15                              58
  CLUS_3                            18                              43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(19Q13.32) MUTATED       13     10     14     17
  DEL PEAK 42(19Q13.32) WILD-TYPE     41     31     38     30
D72V6, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            13                              41
  CLUS_2                            10                              31
  CLUS_3                            14                              38
  CLUS_4                            17                              30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(19Q13.32) MUTATED       28     59     36     20
  DEL PEAK 42(19Q13.32) WILD-TYPE     82     86    117     58
D72V7, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            28                              82
  CLUS_2                            59                              86
  CLUS_3                            36                             117
  CLUS_4                            20                              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(19Q13.32) MUTATED       56     53     34
  DEL PEAK 42(19Q13.32) WILD-TYPE    146     96    101
D72V8, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            56                             146
  CLUS_2                            53                              96
  CLUS_3                            34                             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(19Q13.32) MUTATED       41     46     23     25
  DEL PEAK 42(19Q13.32) WILD-TYPE    104     84    102     39
D72V9, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            41                             104
  CLUS_2                            46                              84
  CLUS_3                            23                             102
  CLUS_4                            25                              39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(19Q13.32) MUTATED       20     61     54
  DEL PEAK 42(19Q13.32) WILD-TYPE     54    132    143
D72V10, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            20                              54
  CLUS_2                            61                             132
  CLUS_3                            54                             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(19Q13.32) MUTATED       42     26     26
  DEL PEAK 42(19Q13.32) WILD-TYPE     83     86     65
D72V11, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            42                              83
  CLUS_2                            26                              86
  CLUS_3                            26                              65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 42(19Q13.32) MUTATED       21      5      7      5      9     20
  DEL PEAK 42(19Q13.32) WILD-TYPE     32     29     21     21     29     39
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 42(19Q13.32) MUTATED        6      5     16
  DEL PEAK 42(19Q13.32) WILD-TYPE     25     16     22
D72V12, multiclass
        clus
vv       DEL PEAK 42(19Q13.32) MUTATED DEL PEAK 42(19Q13.32) WILD-TYPE
  CLUS_1                            21                              32
  CLUS_2                             5                              29
  CLUS_3                             7                              21
  CLUS_4                             5                              21
  CLUS_5                             9                              29
  CLUS_6                            20                              39
  CLUS_7                             6                              25
  CLUS_8                             5                              16
  CLUS_9                            16                              22
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(73) Variable = DEL PEAK 43(21Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(21Q11.2) MUTATED       21     27     15     10
  DEL PEAK 43(21Q11.2) WILD-TYPE     21     25     17     18
D73V1, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           21                             21
  CLUS_2                           27                             25
  CLUS_3                           15                             17
  CLUS_4                           10                             18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(21Q11.2) MUTATED       24     28     21
  DEL PEAK 43(21Q11.2) WILD-TYPE     23     28     30
D73V2, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           24                             23
  CLUS_2                           28                             28
  CLUS_3                           21                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(21Q11.2) MUTATED       71     91     79
  DEL PEAK 43(21Q11.2) WILD-TYPE    122     71     56
D73V3, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           71                            122
  CLUS_2                           91                             71
  CLUS_3                           79                             56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(21Q11.2) MUTATED       62     59     56
  DEL PEAK 43(21Q11.2) WILD-TYPE     80     55     44
D73V4, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           62                             80
  CLUS_2                           59                             55
  CLUS_3                           56                             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(21Q11.2) MUTATED       26     33     27
  DEL PEAK 43(21Q11.2) WILD-TYPE     34     40     34
D73V5, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           26                             34
  CLUS_2                           33                             40
  CLUS_3                           27                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(21Q11.2) MUTATED       21     18     26     21
  DEL PEAK 43(21Q11.2) WILD-TYPE     33     23     26     26
D73V6, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           21                             33
  CLUS_2                           18                             23
  CLUS_3                           26                             26
  CLUS_4                           21                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(21Q11.2) MUTATED       49     77     83     31
  DEL PEAK 43(21Q11.2) WILD-TYPE     61     68     70     47
D73V7, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           49                             61
  CLUS_2                           77                             68
  CLUS_3                           83                             70
  CLUS_4                           31                             47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(21Q11.2) MUTATED       99     72     69
  DEL PEAK 43(21Q11.2) WILD-TYPE    103     77     66
D73V8, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           99                            103
  CLUS_2                           72                             77
  CLUS_3                           69                             66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(21Q11.2) MUTATED       77     82     46     25
  DEL PEAK 43(21Q11.2) WILD-TYPE     68     48     79     39
D73V9, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           77                             68
  CLUS_2                           82                             48
  CLUS_3                           46                             79
  CLUS_4                           25                             39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(21Q11.2) MUTATED       32     89    109
  DEL PEAK 43(21Q11.2) WILD-TYPE     42    104     88
D73V10, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           32                             42
  CLUS_2                           89                            104
  CLUS_3                          109                             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(21Q11.2) MUTATED       73     55     35
  DEL PEAK 43(21Q11.2) WILD-TYPE     52     57     56
D73V11, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           73                             52
  CLUS_2                           55                             57
  CLUS_3                           35                             56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 43(21Q11.2) MUTATED       22     19      8      9     22     31
  DEL PEAK 43(21Q11.2) WILD-TYPE     31     15     20     17     16     28
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 43(21Q11.2) MUTATED       15     13     24
  DEL PEAK 43(21Q11.2) WILD-TYPE     16      8     14
D73V12, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           22                             31
  CLUS_2                           19                             15
  CLUS_3                            8                             20
  CLUS_4                            9                             17
  CLUS_5                           22                             16
  CLUS_6                           31                             28
  CLUS_7                           15                             16
  CLUS_8                           13                              8
  CLUS_9                           24                             14
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(74) Variable = DEL PEAK 44(21Q22.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(21Q22.3) MUTATED       25     35     19     16
  DEL PEAK 44(21Q22.3) WILD-TYPE     17     17     13     12
D74V1, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           25                             17
  CLUS_2                           35                             17
  CLUS_3                           19                             13
  CLUS_4                           16                             12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(21Q22.3) MUTATED       30     39     26
  DEL PEAK 44(21Q22.3) WILD-TYPE     17     17     25
D74V2, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           30                             17
  CLUS_2                           39                             17
  CLUS_3                           26                             25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(21Q22.3) MUTATED       79    110     87
  DEL PEAK 44(21Q22.3) WILD-TYPE    114     52     48
D74V3, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           79                            114
  CLUS_2                          110                             52
  CLUS_3                           87                             48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(21Q22.3) MUTATED       66     70     58
  DEL PEAK 44(21Q22.3) WILD-TYPE     76     44     42
D74V4, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           66                             76
  CLUS_2                           70                             44
  CLUS_3                           58                             42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(21Q22.3) MUTATED       34     43     30
  DEL PEAK 44(21Q22.3) WILD-TYPE     26     30     31
D74V5, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           34                             26
  CLUS_2                           43                             30
  CLUS_3                           30                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(21Q22.3) MUTATED       25     18     33     31
  DEL PEAK 44(21Q22.3) WILD-TYPE     29     23     19     16
D74V6, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           25                             29
  CLUS_2                           18                             23
  CLUS_3                           33                             19
  CLUS_4                           31                             16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(21Q22.3) MUTATED       57     91     88     38
  DEL PEAK 44(21Q22.3) WILD-TYPE     53     54     65     40
D74V7, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           57                             53
  CLUS_2                           91                             54
  CLUS_3                           88                             65
  CLUS_4                           38                             40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(21Q22.3) MUTATED      113     91     70
  DEL PEAK 44(21Q22.3) WILD-TYPE     89     58     65
D74V8, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                          113                             89
  CLUS_2                           91                             58
  CLUS_3                           70                             65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(21Q22.3) MUTATED       95     84     52     33
  DEL PEAK 44(21Q22.3) WILD-TYPE     50     46     73     31
D74V9, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           95                             50
  CLUS_2                           84                             46
  CLUS_3                           52                             73
  CLUS_4                           33                             31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(21Q22.3) MUTATED       43     95    126
  DEL PEAK 44(21Q22.3) WILD-TYPE     31     98     71
D74V10, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           43                             31
  CLUS_2                           95                             98
  CLUS_3                          126                             71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(21Q22.3) MUTATED       74     59     43
  DEL PEAK 44(21Q22.3) WILD-TYPE     51     53     48
D74V11, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           74                             51
  CLUS_2                           59                             53
  CLUS_3                           43                             48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 44(21Q22.3) MUTATED       25     19      8     11     21     33
  DEL PEAK 44(21Q22.3) WILD-TYPE     28     15     20     15     17     26
                                vv
clus                             CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 44(21Q22.3) MUTATED       18     14     27
  DEL PEAK 44(21Q22.3) WILD-TYPE     13      7     11
D74V12, multiclass
        clus
vv       DEL PEAK 44(21Q22.3) MUTATED DEL PEAK 44(21Q22.3) WILD-TYPE
  CLUS_1                           25                             28
  CLUS_2                           19                             15
  CLUS_3                            8                             20
  CLUS_4                           11                             15
  CLUS_5                           21                             17
  CLUS_6                           33                             26
  CLUS_7                           18                             13
  CLUS_8                           14                              7
  CLUS_9                           27                             11
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(75) Variable = DEL PEAK 45(22Q11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(22Q11.21) MUTATED        4     11      8     11
  DEL PEAK 45(22Q11.21) WILD-TYPE     38     41     24     17
D75V1, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                             4                              38
  CLUS_2                            11                              41
  CLUS_3                             8                              24
  CLUS_4                            11                              17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(22Q11.21) MUTATED        6     12     16
  DEL PEAK 45(22Q11.21) WILD-TYPE     41     44     35
D75V2, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                             6                              41
  CLUS_2                            12                              44
  CLUS_3                            16                              35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(22Q11.21) MUTATED       42     25     25
  DEL PEAK 45(22Q11.21) WILD-TYPE    151    137    110
D75V3, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                            42                             151
  CLUS_2                            25                             137
  CLUS_3                            25                             110
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(22Q11.21) MUTATED       33     14     16
  DEL PEAK 45(22Q11.21) WILD-TYPE    109    100     84
D75V4, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                            33                             109
  CLUS_2                            14                             100
  CLUS_3                            16                              84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(22Q11.21) MUTATED       14     13      6
  DEL PEAK 45(22Q11.21) WILD-TYPE     46     60     55
D75V5, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                            14                              46
  CLUS_2                            13                              60
  CLUS_3                             6                              55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(22Q11.21) MUTATED       13      6      9      5
  DEL PEAK 45(22Q11.21) WILD-TYPE     41     35     43     42
D75V6, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                            13                              41
  CLUS_2                             6                              35
  CLUS_3                             9                              43
  CLUS_4                             5                              42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(22Q11.21) MUTATED       20     20     37     15
  DEL PEAK 45(22Q11.21) WILD-TYPE     90    125    116     63
D75V7, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                            20                              90
  CLUS_2                            20                             125
  CLUS_3                            37                             116
  CLUS_4                            15                              63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(22Q11.21) MUTATED       26     24     42
  DEL PEAK 45(22Q11.21) WILD-TYPE    176    125     93
D75V8, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                            26                             176
  CLUS_2                            24                             125
  CLUS_3                            42                              93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(22Q11.21) MUTATED       32     22     22      8
  DEL PEAK 45(22Q11.21) WILD-TYPE    113    108    103     56
D75V9, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                            32                             113
  CLUS_2                            22                             108
  CLUS_3                            22                             103
  CLUS_4                             8                              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(22Q11.21) MUTATED       12     37     35
  DEL PEAK 45(22Q11.21) WILD-TYPE     62    156    162
D75V10, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                            12                              62
  CLUS_2                            37                             156
  CLUS_3                            35                             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(22Q11.21) MUTATED       21     17     19
  DEL PEAK 45(22Q11.21) WILD-TYPE    104     95     72
D75V11, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                            21                             104
  CLUS_2                            17                              95
  CLUS_3                            19                              72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 45(22Q11.21) MUTATED       13      6      2      7      6     10
  DEL PEAK 45(22Q11.21) WILD-TYPE     40     28     26     19     32     49
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 45(22Q11.21) MUTATED        5      1      7
  DEL PEAK 45(22Q11.21) WILD-TYPE     26     20     31
D75V12, multiclass
        clus
vv       DEL PEAK 45(22Q11.21) MUTATED DEL PEAK 45(22Q11.21) WILD-TYPE
  CLUS_1                            13                              40
  CLUS_2                             6                              28
  CLUS_3                             2                              26
  CLUS_4                             7                              19
  CLUS_5                             6                              32
  CLUS_6                            10                              49
  CLUS_7                             5                              26
  CLUS_8                             1                              20
  CLUS_9                             7                              31
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(76) Variable = DEL PEAK 46(22Q13.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(22Q13.32) MUTATED        8      8      8     17
  DEL PEAK 46(22Q13.32) WILD-TYPE     34     44     24     11
D76V1, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                             8                              34
  CLUS_2                             8                              44
  CLUS_3                             8                              24
  CLUS_4                            17                              11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(22Q13.32) MUTATED       11      9     21
  DEL PEAK 46(22Q13.32) WILD-TYPE     36     47     30
D76V2, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                            11                              36
  CLUS_2                             9                              47
  CLUS_3                            21                              30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(22Q13.32) MUTATED       55     32     38
  DEL PEAK 46(22Q13.32) WILD-TYPE    138    130     97
D76V3, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                            55                             138
  CLUS_2                            32                             130
  CLUS_3                            38                              97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(22Q13.32) MUTATED       46     19     26
  DEL PEAK 46(22Q13.32) WILD-TYPE     96     95     74
D76V4, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                            46                              96
  CLUS_2                            19                              95
  CLUS_3                            26                              74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(22Q13.32) MUTATED       17     18     11
  DEL PEAK 46(22Q13.32) WILD-TYPE     43     55     50
D76V5, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                            17                              43
  CLUS_2                            18                              55
  CLUS_3                            11                              50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(22Q13.32) MUTATED       17      8     14      7
  DEL PEAK 46(22Q13.32) WILD-TYPE     37     33     38     40
D76V6, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                            17                              37
  CLUS_2                             8                              33
  CLUS_3                            14                              38
  CLUS_4                             7                              40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(22Q13.32) MUTATED       29     22     57     17
  DEL PEAK 46(22Q13.32) WILD-TYPE     81    123     96     61
D76V7, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                            29                              81
  CLUS_2                            22                             123
  CLUS_3                            57                              96
  CLUS_4                            17                              61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(22Q13.32) MUTATED       45     21     59
  DEL PEAK 46(22Q13.32) WILD-TYPE    157    128     76
D76V8, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                            45                             157
  CLUS_2                            21                             128
  CLUS_3                            59                              76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(22Q13.32) MUTATED       41     37     29      8
  DEL PEAK 46(22Q13.32) WILD-TYPE    104     93     96     56
D76V9, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                            41                             104
  CLUS_2                            37                              93
  CLUS_3                            29                              96
  CLUS_4                             8                              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(22Q13.32) MUTATED        8     49     58
  DEL PEAK 46(22Q13.32) WILD-TYPE     66    144    139
D76V10, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                             8                              66
  CLUS_2                            49                             144
  CLUS_3                            58                             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(22Q13.32) MUTATED       33     27     23
  DEL PEAK 46(22Q13.32) WILD-TYPE     92     85     68
D76V11, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                            33                              92
  CLUS_2                            27                              85
  CLUS_3                            23                              68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 46(22Q13.32) MUTATED       17     10      3      8     14     15
  DEL PEAK 46(22Q13.32) WILD-TYPE     36     24     25     18     24     44
                                 vv
clus                              CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 46(22Q13.32) MUTATED        1      3     12
  DEL PEAK 46(22Q13.32) WILD-TYPE     30     18     26
D76V12, multiclass
        clus
vv       DEL PEAK 46(22Q13.32) MUTATED DEL PEAK 46(22Q13.32) WILD-TYPE
  CLUS_1                            17                              36
  CLUS_2                            10                              24
  CLUS_3                             3                              25
  CLUS_4                             8                              18
  CLUS_5                            14                              24
  CLUS_6                            15                              44
  CLUS_7                             1                              30
  CLUS_8                             3                              18
  CLUS_9                            12                              26
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(77) Variable = DEL PEAK 47(XP22.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(XP22.2) MUTATED       10     18      9      8
  DEL PEAK 47(XP22.2) WILD-TYPE     32     34     23     20
D77V1, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          10                            32
  CLUS_2                          18                            34
  CLUS_3                           9                            23
  CLUS_4                           8                            20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XP22.2) MUTATED       11     19     15
  DEL PEAK 47(XP22.2) WILD-TYPE     36     37     36
D77V2, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          11                            36
  CLUS_2                          19                            37
  CLUS_3                          15                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XP22.2) MUTATED       38     64     49
  DEL PEAK 47(XP22.2) WILD-TYPE    155     98     86
D77V3, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          38                           155
  CLUS_2                          64                            98
  CLUS_3                          49                            86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XP22.2) MUTATED       26     44     39
  DEL PEAK 47(XP22.2) WILD-TYPE    116     70     61
D77V4, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          26                           116
  CLUS_2                          44                            70
  CLUS_3                          39                            61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XP22.2) MUTATED       22     25     16
  DEL PEAK 47(XP22.2) WILD-TYPE     38     48     45
D77V5, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          22                            38
  CLUS_2                          25                            48
  CLUS_3                          16                            45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(XP22.2) MUTATED       19     11     15     18
  DEL PEAK 47(XP22.2) WILD-TYPE     35     30     37     29
D77V6, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          19                            35
  CLUS_2                          11                            30
  CLUS_3                          15                            37
  CLUS_4                          18                            29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(XP22.2) MUTATED       35     56     43     15
  DEL PEAK 47(XP22.2) WILD-TYPE     75     89    110     63
D77V7, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          35                            75
  CLUS_2                          56                            89
  CLUS_3                          43                           110
  CLUS_4                          15                            63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XP22.2) MUTATED       54     58     37
  DEL PEAK 47(XP22.2) WILD-TYPE    148     91     98
D77V8, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          54                           148
  CLUS_2                          58                            91
  CLUS_3                          37                            98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(XP22.2) MUTATED       40     50     26     28
  DEL PEAK 47(XP22.2) WILD-TYPE    105     80     99     36
D77V9, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          40                           105
  CLUS_2                          50                            80
  CLUS_3                          26                            99
  CLUS_4                          28                            36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XP22.2) MUTATED       29     52     63
  DEL PEAK 47(XP22.2) WILD-TYPE     45    141    134
D77V10, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          29                            45
  CLUS_2                          52                           141
  CLUS_3                          63                           134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XP22.2) MUTATED       55     26     23
  DEL PEAK 47(XP22.2) WILD-TYPE     70     86     68
D77V11, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          55                            70
  CLUS_2                          26                            86
  CLUS_3                          23                            68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 47(XP22.2) MUTATED       18      8      4      5     12     21
  DEL PEAK 47(XP22.2) WILD-TYPE     35     26     24     21     26     38
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 47(XP22.2) MUTATED       13      5     18
  DEL PEAK 47(XP22.2) WILD-TYPE     18     16     20
D77V12, multiclass
        clus
vv       DEL PEAK 47(XP22.2) MUTATED DEL PEAK 47(XP22.2) WILD-TYPE
  CLUS_1                          18                            35
  CLUS_2                           8                            26
  CLUS_3                           4                            24
  CLUS_4                           5                            21
  CLUS_5                          12                            26
  CLUS_6                          21                            38
  CLUS_7                          13                            18
  CLUS_8                           5                            16
  CLUS_9                          18                            20
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(78) Variable = DEL PEAK 48(XP21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(XP21.1) MUTATED       11     20      8      7
  DEL PEAK 48(XP21.1) WILD-TYPE     31     32     24     21
D78V1, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          11                            31
  CLUS_2                          20                            32
  CLUS_3                           8                            24
  CLUS_4                           7                            21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(XP21.1) MUTATED       13     20     13
  DEL PEAK 48(XP21.1) WILD-TYPE     34     36     38
D78V2, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          13                            34
  CLUS_2                          20                            36
  CLUS_3                          13                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(XP21.1) MUTATED       34     68     47
  DEL PEAK 48(XP21.1) WILD-TYPE    159     94     88
D78V3, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          34                           159
  CLUS_2                          68                            94
  CLUS_3                          47                            88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(XP21.1) MUTATED       21     47     39
  DEL PEAK 48(XP21.1) WILD-TYPE    121     67     61
D78V4, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          21                           121
  CLUS_2                          47                            67
  CLUS_3                          39                            61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(XP21.1) MUTATED       24     23     16
  DEL PEAK 48(XP21.1) WILD-TYPE     36     50     45
D78V5, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          24                            36
  CLUS_2                          23                            50
  CLUS_3                          16                            45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(XP21.1) MUTATED       19     13     14     17
  DEL PEAK 48(XP21.1) WILD-TYPE     35     28     38     30
D78V6, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          19                            35
  CLUS_2                          13                            28
  CLUS_3                          14                            38
  CLUS_4                          17                            30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(XP21.1) MUTATED       34     62     36     15
  DEL PEAK 48(XP21.1) WILD-TYPE     76     83    117     63
D78V7, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          34                            76
  CLUS_2                          62                            83
  CLUS_3                          36                           117
  CLUS_4                          15                            63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(XP21.1) MUTATED       54     63     30
  DEL PEAK 48(XP21.1) WILD-TYPE    148     86    105
D78V8, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          54                           148
  CLUS_2                          63                            86
  CLUS_3                          30                           105
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(XP21.1) MUTATED       44     52     20     28
  DEL PEAK 48(XP21.1) WILD-TYPE    101     78    105     36
D78V9, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          44                           101
  CLUS_2                          52                            78
  CLUS_3                          20                           105
  CLUS_4                          28                            36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(XP21.1) MUTATED       32     54     58
  DEL PEAK 48(XP21.1) WILD-TYPE     42    139    139
D78V10, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          32                            42
  CLUS_2                          54                           139
  CLUS_3                          58                           139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(XP21.1) MUTATED       55     24     22
  DEL PEAK 48(XP21.1) WILD-TYPE     70     88     69
D78V11, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          55                            70
  CLUS_2                          24                            88
  CLUS_3                          22                            69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 48(XP21.1) MUTATED       20      6      2      4     13     18
  DEL PEAK 48(XP21.1) WILD-TYPE     33     28     26     22     25     41
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 48(XP21.1) MUTATED       14      6     18
  DEL PEAK 48(XP21.1) WILD-TYPE     17     15     20
D78V12, multiclass
        clus
vv       DEL PEAK 48(XP21.1) MUTATED DEL PEAK 48(XP21.1) WILD-TYPE
  CLUS_1                          20                            33
  CLUS_2                           6                            28
  CLUS_3                           2                            26
  CLUS_4                           4                            22
  CLUS_5                          13                            25
  CLUS_6                          18                            41
  CLUS_7                          14                            17
  CLUS_8                           6                            15
  CLUS_9                          18                            20
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(79) Variable = DEL PEAK 49(XP11.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(XP11.3) MUTATED        8     20      7     11
  DEL PEAK 49(XP11.3) WILD-TYPE     34     32     25     17
D79V1, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                           8                            34
  CLUS_2                          20                            32
  CLUS_3                           7                            25
  CLUS_4                          11                            17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(XP11.3) MUTATED       14     20     12
  DEL PEAK 49(XP11.3) WILD-TYPE     33     36     39
D79V2, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          14                            33
  CLUS_2                          20                            36
  CLUS_3                          12                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(XP11.3) MUTATED       33     70     42
  DEL PEAK 49(XP11.3) WILD-TYPE    160     92     93
D79V3, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          33                           160
  CLUS_2                          70                            92
  CLUS_3                          42                            93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(XP11.3) MUTATED       20     48     36
  DEL PEAK 49(XP11.3) WILD-TYPE    122     66     64
D79V4, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          20                           122
  CLUS_2                          48                            66
  CLUS_3                          36                            64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(XP11.3) MUTATED       24     17     17
  DEL PEAK 49(XP11.3) WILD-TYPE     36     56     44
D79V5, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          24                            36
  CLUS_2                          17                            56
  CLUS_3                          17                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(XP11.3) MUTATED       21     11      9     17
  DEL PEAK 49(XP11.3) WILD-TYPE     33     30     43     30
D79V6, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          21                            33
  CLUS_2                          11                            30
  CLUS_3                           9                            43
  CLUS_4                          17                            30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(XP11.3) MUTATED       31     60     40     13
  DEL PEAK 49(XP11.3) WILD-TYPE     79     85    113     65
D79V7, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          31                            79
  CLUS_2                          60                            85
  CLUS_3                          40                           113
  CLUS_4                          13                            65
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(XP11.3) MUTATED       53     60     31
  DEL PEAK 49(XP11.3) WILD-TYPE    149     89    104
D79V8, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          53                           149
  CLUS_2                          60                            89
  CLUS_3                          31                           104
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(XP11.3) MUTATED       40     50     19     30
  DEL PEAK 49(XP11.3) WILD-TYPE    105     80    106     34
D79V9, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          40                           105
  CLUS_2                          50                            80
  CLUS_3                          19                           106
  CLUS_4                          30                            34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(XP11.3) MUTATED       31     52     56
  DEL PEAK 49(XP11.3) WILD-TYPE     43    141    141
D79V10, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          31                            43
  CLUS_2                          52                           141
  CLUS_3                          56                           141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(XP11.3) MUTATED       55     23     19
  DEL PEAK 49(XP11.3) WILD-TYPE     70     89     72
D79V11, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          55                            70
  CLUS_2                          23                            89
  CLUS_3                          19                            72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 49(XP11.3) MUTATED       20      7      2      4     13     14
  DEL PEAK 49(XP11.3) WILD-TYPE     33     27     26     22     25     45
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 49(XP11.3) MUTATED       14      6     17
  DEL PEAK 49(XP11.3) WILD-TYPE     17     15     21
D79V12, multiclass
        clus
vv       DEL PEAK 49(XP11.3) MUTATED DEL PEAK 49(XP11.3) WILD-TYPE
  CLUS_1                          20                            33
  CLUS_2                           7                            27
  CLUS_3                           2                            26
  CLUS_4                           4                            22
  CLUS_5                          13                            25
  CLUS_6                          14                            45
  CLUS_7                          14                            17
  CLUS_8                           6                            15
  CLUS_9                          17                            21
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(80) Variable = DEL PEAK 50(XQ22.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(XQ22.3) MUTATED       15      7      5     10
  DEL PEAK 50(XQ22.3) WILD-TYPE     27     45     27     18
D80V1, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          15                            27
  CLUS_2                           7                            45
  CLUS_3                           5                            27
  CLUS_4                          10                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XQ22.3) MUTATED       18      7     12
  DEL PEAK 50(XQ22.3) WILD-TYPE     29     49     39
D80V2, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          18                            29
  CLUS_2                           7                            49
  CLUS_3                          12                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XQ22.3) MUTATED       26     36     48
  DEL PEAK 50(XQ22.3) WILD-TYPE    167    126     87
D80V3, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          26                           167
  CLUS_2                          36                           126
  CLUS_3                          48                            87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XQ22.3) MUTATED       13     25     37
  DEL PEAK 50(XQ22.3) WILD-TYPE    129     89     63
D80V4, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          13                           129
  CLUS_2                          25                            89
  CLUS_3                          37                            63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XQ22.3) MUTATED       15     17     13
  DEL PEAK 50(XQ22.3) WILD-TYPE     45     56     48
D80V5, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          15                            45
  CLUS_2                          17                            56
  CLUS_3                          13                            48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(XQ22.3) MUTATED       13     10     10     12
  DEL PEAK 50(XQ22.3) WILD-TYPE     41     31     42     35
D80V6, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          13                            41
  CLUS_2                          10                            31
  CLUS_3                          10                            42
  CLUS_4                          12                            35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(XQ22.3) MUTATED       34     28     40      7
  DEL PEAK 50(XQ22.3) WILD-TYPE     76    117    113     71
D80V7, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          34                            76
  CLUS_2                          28                           117
  CLUS_3                          40                           113
  CLUS_4                           7                            71
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XQ22.3) MUTATED       53     28     28
  DEL PEAK 50(XQ22.3) WILD-TYPE    149    121    107
D80V8, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          53                           149
  CLUS_2                          28                           121
  CLUS_3                          28                           107
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(XQ22.3) MUTATED       37     43     12     14
  DEL PEAK 50(XQ22.3) WILD-TYPE    108     87    113     50
D80V9, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          37                           108
  CLUS_2                          43                            87
  CLUS_3                          12                           113
  CLUS_4                          14                            50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XQ22.3) MUTATED       16     39     51
  DEL PEAK 50(XQ22.3) WILD-TYPE     58    154    146
D80V10, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          16                            58
  CLUS_2                          39                           154
  CLUS_3                          51                           146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(XQ22.3) MUTATED       40     23      9
  DEL PEAK 50(XQ22.3) WILD-TYPE     85     89     82
D80V11, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          40                            85
  CLUS_2                          23                            89
  CLUS_3                           9                            82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 50(XQ22.3) MUTATED       17      9      1      0      9     11
  DEL PEAK 50(XQ22.3) WILD-TYPE     36     25     27     26     29     48
                               vv
clus                            CLUS_7 CLUS_8 CLUS_9
  DEL PEAK 50(XQ22.3) MUTATED        6      6     13
  DEL PEAK 50(XQ22.3) WILD-TYPE     25     15     25
D80V12, multiclass
        clus
vv       DEL PEAK 50(XQ22.3) MUTATED DEL PEAK 50(XQ22.3) WILD-TYPE
  CLUS_1                          17                            36
  CLUS_2                           9                            25
  CLUS_3                           1                            27
  CLUS_4                           0                            26
  CLUS_5                           9                            29
  CLUS_6                          11                            48
  CLUS_7                           6                            25
  CLUS_8                           6                            15
  CLUS_9                          13                            25
[1] 9 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
