
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_TopgenesforCluster/broadinstitute.org/cancer.genome.analysis/00205/39/Topgenes_v1.R")
> result <- main("-s/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_TopgenesforCluster/broadinstitute.org/cancer.genome.analysis/00205/39/", "-m/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MethylationPreprocess/LUSC-TP/9831878/LUSC-TP.meth.by_max_stddev.data.txt", "-u4561", "-oLUSC-TP")
Cluster size 4561 broken into 2590 1971 
Cluster size 2590 broken into 1844 746 
Cluster size 1844 broken into 840 1004 
Done cluster 840 
Done cluster 1004 
Done cluster 1844 
Done cluster 746 
Done cluster 2590 
Cluster size 1971 broken into 987 984 
Done cluster 987 
Done cluster 984 
Done cluster 1971 
> q(save="no")
