Unique Name	Descriptor	Wide Peak Limits	Peak Limits	Region Limits	q values	Residual q values after removing segments shared with higher peaks	Broad or Focal	Amplitude Threshold	TCGA-F2-6879-01A-11D-2153-01	TCGA-F2-6880-01A-11D-2153-01	TCGA-F2-7273-01A-11D-2153-01	TCGA-F2-7276-01A-11D-2153-01	TCGA-F2-A44G-01A-11D-A26H-01	TCGA-F2-A44H-01A-11D-A26H-01	TCGA-FB-A4P5-01A-11D-A26H-01	TCGA-FB-A545-01A-11D-A26H-01	TCGA-FB-A5VM-01A-11D-A32M-01	TCGA-FB-A78T-01A-12D-A32M-01	TCGA-FB-A7DR-01A-21D-A33S-01	TCGA-FZ-5919-01A-11D-1608-01	TCGA-FZ-5920-01A-11D-1608-01	TCGA-FZ-5921-01A-11D-1608-01	TCGA-FZ-5922-01A-11D-1608-01	TCGA-FZ-5923-01A-12D-1608-01	TCGA-FZ-5924-01A-13D-1608-01	TCGA-FZ-5926-01A-11D-1608-01	TCGA-H6-8124-01A-11D-2392-01	TCGA-H6-A45N-01A-11D-A26H-01	TCGA-H8-A6C1-01A-11D-A32M-01	TCGA-HV-A5A3-01A-11D-A26H-01	TCGA-HV-A5A4-01A-11D-A26H-01	TCGA-HV-A5A5-01A-11D-A26H-01	TCGA-HV-A5A6-01A-11D-A26H-01	TCGA-HV-A7OL-01A-11D-A33S-01	TCGA-HV-A7OP-01A-11D-A33S-01	TCGA-HZ-7289-01A-11D-2153-01	TCGA-HZ-7918-01A-11D-2153-01	TCGA-HZ-7919-01A-11D-2153-01	TCGA-HZ-7920-01A-11D-2200-01	TCGA-HZ-7922-01A-11D-2153-01	TCGA-HZ-7923-01A-12D-2153-01	TCGA-HZ-7924-01A-11D-2153-01	TCGA-HZ-7925-01A-11D-2153-01	TCGA-HZ-7926-01A-11D-2153-01	TCGA-HZ-8001-01A-11D-2200-01	TCGA-HZ-8002-01A-11D-2200-01	TCGA-HZ-8003-01A-21D-2200-01	TCGA-HZ-8005-01A-11D-2200-01	TCGA-HZ-8315-01A-11D-2392-01	TCGA-HZ-8317-01A-11D-2392-01	TCGA-HZ-8519-01A-11D-2392-01	TCGA-HZ-8636-01A-21D-2392-01	TCGA-HZ-8637-01A-11D-2392-01	TCGA-HZ-8638-01A-11D-2392-01	TCGA-HZ-A49G-01A-11D-A26H-01	TCGA-HZ-A49H-01A-11D-A26H-01	TCGA-HZ-A49I-01A-12D-A26H-01	TCGA-HZ-A4BH-01A-11D-A26H-01	TCGA-HZ-A4BK-01A-11D-A26H-01	TCGA-HZ-A77O-01A-11D-A33S-01	TCGA-HZ-A77P-01A-11D-A33S-01	TCGA-HZ-A77Q-01A-11D-A36N-01	TCGA-HZ-A8P0-01A-11D-A36N-01	TCGA-IB-7644-01A-11D-2153-01	TCGA-IB-7645-01A-22D-2200-01	TCGA-IB-7646-01A-11D-2153-01	TCGA-IB-7647-01A-11D-2153-01	TCGA-IB-7649-01A-11D-2153-01	TCGA-IB-7651-01A-11D-2153-01	TCGA-IB-7652-01A-11D-2153-01	TCGA-IB-7654-01A-11D-2153-01	TCGA-IB-7885-01A-11D-2153-01	TCGA-IB-7886-01A-11D-2153-01	TCGA-IB-7887-01A-11D-2153-01	TCGA-IB-7888-01A-11D-2153-01	TCGA-IB-7889-01A-11D-2153-01	TCGA-IB-7890-01A-12D-2200-01	TCGA-IB-7891-01A-11D-2200-01	TCGA-IB-7893-01A-11D-2200-01	TCGA-IB-7897-01A-21D-2200-01	TCGA-IB-8126-01A-11D-2392-01	TCGA-IB-8127-01A-11D-2392-01	TCGA-IB-A5SO-01A-11D-A32M-01	TCGA-IB-A5SP-01A-11D-A32M-01	TCGA-IB-A5SQ-01A-11D-A32M-01	TCGA-IB-A5SS-01A-11D-A32M-01	TCGA-IB-A5ST-01A-11D-A32M-01	TCGA-IB-A6UF-01A-23D-A33S-01	TCGA-IB-A6UG-01A-32D-A33S-01	TCGA-IB-A7LX-01A-12D-A36N-01	TCGA-IB-A7M4-01A-11D-A36N-01	TCGA-L1-A7W4-01A-12D-A36N-01	TCGA-LB-A7SX-01A-11D-A33S-01	TCGA-LB-A8F3-01A-11D-A36N-01	TCGA-M8-A5N4-01A-11D-A26H-01	TCGA-OE-A75W-01A-12D-A32M-01	TCGA-PZ-A5RE-01A-11D-A32M-01	TCGA-Q3-A5QY-01A-12D-A32M-01	TCGA-RB-A7B8-01A-12D-A33S-01	TCGA-S4-A8RP-01A-11D-A36N-01	TCGA-US-A774-01A-21D-A32M-01	TCGA-US-A776-01A-13D-A33S-01	TCGA-US-A779-01A-11D-A32M-01	TCGA-US-A77E-01A-11D-A32M-01	TCGA-US-A77G-01A-11D-A32M-01	TCGA-US-A77J-01A-11D-A32M-01	TCGA-XN-A8T3-01A-11D-A36N-01	TCGA-XN-A8T5-01A-12D-A36N-01	TCGA-YB-A89D-01A-12D-A36N-01	TCGA-YY-A8LH-01A-11D-A36N-01	
Amplification Peak  1	1p34.2  	chr1:31385322-44557362(probes 14809:21959)        	chr1:41107240-42223908(probes 19871:20531)        	chr1:41107240-42227600(probes 19871:20534)        	0.1948	     0.1948		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	
Amplification Peak  2	1p12    	chr1:120204209-120523901(probes 67638:67828)    	chr1:120204250-120522600(probes 67639:67827)    	chr1:120033850-120527360(probes 67545:67830)    	0.012572	   0.012572		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	2	0	0	2	0	0	1	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	
Amplification Peak  3	6p21.31 	chr6:35905507-35984482(probes 591036:591073)      	chr6:35906439-35981329(probes 591037:591072)      	chr6:35906439-35991473(probes 591037:591075)      	0.022451	   0.022451		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	2	0	0	0	
Amplification Peak  4	7q22.1  	chr7:97568629-99186825(probes 716662:717310)      	chr7:98406354-98982024(probes 717063:717252)      	chr7:97524031-100224010(probes 716659:717684)    	0.0012448	  0.0012448		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	1	0	0	2	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	1	0	0	0	0	0	2	0	1	0	0	0	0	1	0	0	0	0	1	0	0	1	0	0	1	0	0	1	0	0	1	0	1	0	0	0	0	1	1	0	1	1	0	1	0	2	0	1	0	0	1	0	1	0	0	0	0	1	0	
Amplification Peak  5	8q24.21 	chr8:127864635-128801947(probes 819164:819880)  	chr8:128107201-128800300(probes 819371:819879)  	chr8:113366166-146364022(probes 810013:829804)  	1.1477e-05	 1.1477e-05		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	0	0	0	0	0	1	1	1	0	0	0	1	0	0	0	1	0	0	1	2	0	0	2	0	0	1	1	0	0	1	0	0	1	0	0	0	0	2	1	0	0	1	1	0	0	0	0	0	0	1	0	0	0	0	0	1	1	1	0	1	1	0	1	0	0	1	1	0	1	0	0	1	0	1	0	1	0	1	1	1	2	2	0	0	1	1	0	0	0	1	0	1	2	0	0	0	1	0	1	0	
Amplification Peak  6	9p13.3  	chr9:35244633-35825412(probes 850940:851194)      	chr9:35414557-35557695(probes 851019:851083)      	chr9:35029880-36088647(probes 850829:851359)      	0.025293	   0.025293		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	
Amplification Peak  7	11p11.2 	chr11:24893542-56013797(probes 994535:1009301)   	chr11:46069665-46082094(probes 1007856:1007862)  	chr11:46069665-46087487(probes 1007856:1007865)  	0.19066	    0.19066		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	1	0	0	1	0	1	0	0	0	0	1	1	0	0	0	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	
Amplification Peak  8	12p13.33	chr12:1-5520802(probes 1056053:1058882)             	chr12:2232158-2340418(probes 1056476:1056528)      	chr12:1-5521559(probes 1056053:1058884)             	0.0017326	    0.00247		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	1	1	1	0	0	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	
Amplification Peak  9	12p12.1 	chr12:19727978-29419459(probes 1066712:1072991)  	chr12:25209765-25210135(probes 1070130:1070130)  	chr12:19728487-28247597(probes 1066713:1072289)  	0.0022878	    0.10344		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	0	1	1	0	0	0	0	2	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	2	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	1	0	0	0	0	0	2	1	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 10	12p11.21	chr12:31414318-31442221(probes 1074355:1074366)  	chr12:31414474-31440450(probes 1074356:1074365)  	chr12:30846561-32410586(probes 1074044:1074914)  	0.0092151	   0.021088		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	1	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	2	2	1	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 11	12q15   	chr12:68307608-70989876(probes 1091992:1093872)  	chr12:68393163-68418829(probes 1092065:1092087)  	chr12:68114499-71147292(probes 1091865:1093973)  	0.0044655	  0.0044655		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	2	0	0	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 12	17p11.2 	chr17:19277362-19895201(probes 1330443:1330774)  	chr17:19279467-19543197(probes 1330444:1330556)  	chr17:19279467-19543971(probes 1330444:1330559)  	0.072178	   0.072178		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 13	17q21.32	chr17:43500951-54883634(probes 1339409:1345204)  	chr17:46157895-46173126(probes 1340099:1340105)  	chr17:46157895-46190580(probes 1340099:1340108)  	0.14504	    0.14504		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 14	18q11.2 	chr18:19704037-20000875(probes 1367187:1367361)  	chr18:19826743-19876380(probes 1367253:1367283)  	chr18:18694023-22493883(probes 1366758:1368950)  	2.3348e-10	 2.3348e-10		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	0	0	0	1	0	0	1	0	2	0	0	0	1	0	2	0	0	2	0	2	0	1	0	2	1	2	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	0	1	2	0	0	0	1	0	0	1	0	2	0	0	0	0	0	1	0	2	1	1	1	0	0	0	0	2	1	2	0	0	0	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	1	
Amplification Peak 15	19q13.2 	chr19:38513399-40880126(probes 1416760:1417918)  	chr19:39697975-40005004(probes 1417307:1417402)  	chr19:38217345-41165251(probes 1416602:1417983)  	0.0026115	  0.0026115		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	1	0	0	2	0	1	0	0	0	0	0	1	0	0	1	0	2	1	1	0	0	1	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	2	0	0	1	0	1	0	2	0	0	1	0	0	2	1	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	1	0	
Amplification Peak 16	20q13.2 	chr20:50935475-59107639(probes 1454769:1460866)  	chr20:51395648-51437828(probes 1455104:1455129)  	chr20:51093874-51645373(probes 1454875:1455241)  	0.1263	     0.1263		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	0	1	0	0	0	1	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	1	1	0	1	0	0	0	1	2	0	0	0	1	0	1	0	0	0	1	0	0	0	0	1	0	1	0	0	0	1	0	1	1	1	1	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	
Amplification Peak 17	Xp22.11 	chrX:23975644-23983593(probes 1508794:1508801)    	chrX:23976894-23983115(probes 1508795:1508800)    	chrX:23976894-23993915(probes 1508795:1508803)    	0.0105	     0.0105		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	
Amplification Peak 18	Xq27.1  	chrX:138564705-138580557(probes 1556882:1556888)	chrX:138564964-138580376(probes 1556883:1556887)	chrX:138564964-138580758(probes 1556883:1556890)	0.0092471	  0.0092471		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  1	1p36.32 	chr1:1-31412918(probes 1:14818)                    	chr1:4708988-4845111(probes 926:1027)                 	chr1:1-31282891(probes 1:14728)                    	0.062532	    0.10924		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	1	1	0	1	0	1	1	1	0	0	0	0	0	0	1	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0	1	0	1	0	0	0	0	1	1	1	0	0	1	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	
Deletion Peak  2	1p36.11 	chr1:20435467-31265856(probes 9443:14720)         	chr1:27101202-27341204(probes 12761:12835)          	chr1:1-31282891(probes 1:14728)                    	0.0056542	   0.072021		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	1	1	0	1	0	1	1	1	0	0	0	1	0	1	1	0	0	1	1	1	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	1	1	1	0	1	0	0	1	0	0	1	0	0	1	0	1	0	1	0	1	1	1	1	0	0	1	0	1	0	0	1	1	0	1	0	0	0	0	0	0	0	1	
Deletion Peak  3	1p21.2  	chr1:93640821-149920615(probes 51936:67839)      	chr1:100101193-100161103(probes 55948:55986)      	chr1:100143393-100146430(probes 55968:55969)    	0.09364	    0.15609		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	1	0	0	0	0	0	0	1	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	1	1	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	
Deletion Peak  4	1q42.2  	chr1:1-249250621(probes 1:129198)                 	chr1:231497325-231568576(probes 118653:118693)    	chr1:231532512-231535583(probes 118674:118675)  	0.23145	    0.23145		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	
Deletion Peak  5	2p23.3  	chr2:1-59292261(probes 129199:163602)               	chr2:24803410-24993832(probes 144633:144731)        	chr2:24904326-24906638(probes 144683:144684)      	0.22322	    0.22322		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	
Deletion Peak  6	2q37.3  	chr2:202122502-243199373(probes 236375:260556)  	chr2:239748105-240337579(probes 259168:259337)    	chr2:240157422-240161306(probes 259253:259254)  	0.16182	      0.159		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	
Deletion Peak  7	3p24.1  	chr3:1-198022430(probes 260557:366983)            	chr3:30644579-30737294(probes 277368:277464)        	chr3:30700854-30701444(probes 277417:277418)      	0.23531	    0.24071		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	1	1	0	0	0	1	0	1	1	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	
Deletion Peak  8	4q35.2  	chr4:148648862-191154276(probes 448396:469775)  	chr4:187206181-187461705(probes 468896:469021)    	chr4:187307980-187312282(probes 468959:468960)  	0.11324	     0.1104		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	1	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  9	5q14.2  	chr5:82134980-82936981(probes 513796:514284)      	chr5:82372996-82655821(probes 513949:514099)        	chr5:73082094-110692711(probes 508347:528026)    	0.0069079	  0.0069079		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	1	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	1	1	1	1	0	1	1	0	0	0	1	0	0	1	0	0	0	1	0	0	0	
Deletion Peak 10	6p25.2  	chr6:1-10421806(probes 570327:577151)              	chr6:3151318-3232771(probes 571960:571995)            	chr6:1-9560551(probes 570327:576543)                	0.020364	   0.020364		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	0	1	0	1	0	0	0	1	1	1	0	0	1	0	1	0	1	1	0	0	1	1	0	1	1	1	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	1	1	0	0	0	1	1	0	0	0	1	0	1	1	0	1	1	0	1	0	0	1	0	1	0	1	0	1	1	0	0	0	1	0	0	0	1	0	0	0	0	0	1	0	1	0	1	0	1	1	
Deletion Peak 11	7q36.1  	chr7:101454617-159138663(probes 718092:748225)  	chr7:151566444-151578991(probes 744772:744773)    	chr7:121246452-159138663(probes 728532:748225)  	0.069072	   0.069072		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	
Deletion Peak 12	8p21.3  	chr8:1-29215076(probes 748226:765209)               	chr8:22203435-22978810(probes 760597:760953)        	chr8:5247523-26980586(probes 750777:763743)        	0.09364	    0.09364		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	1	0	0	0	1	0	0	1	0	0	1	0	1	0	1	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	1	0	1	0	0	0	0	1	1	0	0	1	0	0	1	1	0	0	1	0	0	0	0	1	0	0	0	0	0	1	1	1	1	1	0	1	0	1	1	0	0	1	0	1	0	0	0	0	1	0	0	0	
Deletion Peak 13	8q12.1  	chr8:49983539-69264813(probes 774098:785291)      	chr8:58114932-58200501(probes 778734:778777)        	chr8:58109221-58208537(probes 778730:778779)      	0.19522	    0.19282		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 14	9p21.3  	chr9:21865498-21996995(probes 843247:843310)      	chr9:21959052-21977193(probes 843298:843299)        	chr9:7055490-31869950(probes 833448:848905)        	4.3377e-50	 4.3377e-50		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	1	1	0	1	1	1	1	1	1	1	1	1	1	1	1	0	1	1	1	0	1	1	0	1	1	1	0	1	0	0	1	0	0	0	0	1	1	0	0	1	1	0	1	0	1	1	1	1	0	1	1	1	1	1	1	1	0	1	1	1	1	1	0	0	1	0	1	0	0	1	0	1	0	1	0	1	0	1	1	1	1	1	1	1	1	0	1	1	0	0	1	1	1	0	1	0	0	1	
Deletion Peak 15	9q22.33 	chr9:101468446-101979393(probes 873608:873962)  	chr9:101864709-101918083(probes 873896:873931)    	chr9:101903956-101907671(probes 873914:873915)  	0.093688	   0.095888		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	1	0	0	0	0	0	1	0	1	1	0	1	1	1	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	1	1	1	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	1	0	0	0	1	0	0	0	1	0	0	0	0	0	0	1	
Deletion Peak 16	10q23.2 	chr10:86084854-125854327(probes 947999:973492)  	chr10:88018950-88030549(probes 949388:949389)      	chr10:87542271-88109286(probes 949025:949444)    	0.12526	    0.12725		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	1	0	1	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	1	0	0	0	0	1	1	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	
Deletion Peak 17	11p15.4 	chr11:1-9473769(probes 978766:983540)               	chr11:4563048-4569024(probes 980372:980375)          	chr11:1-8086986(probes 978766:982710)               	0.055747	   0.060915		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	1	0	1	1	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	
Deletion Peak 18	12p12.3 	chr12:3185141-22798169(probes 1057013:1068675)    	chr12:15474824-15811655(probes 1064282:1064437)    	chr12:7853480-22548548(probes 1060170:1068563)    	0.086974	   0.086974		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 19	12q12   	chr12:31809739-55796833(probes 1074557:1084579)  	chr12:40148348-40501364(probes 1076052:1076314)    	chr12:40323642-40324141(probes 1076184:1076185)  	0.12725	    0.20975		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 20	12q24.33	chr12:75782484-133851895(probes 1096492:1130026)	chr12:131436970-131626305(probes 1129384:1129519)	chr12:78511889-133851895(probes 1098387:1130026)	0.059788	   0.072021		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	1	0	1	1	1	0	0	1	0	1	0	0	1	0	0	0	1	0	0	0	1	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 21	15q15.1 	chr15:1-89748703(probes 1236171:1273345)         	chr15:40328974-41586765(probes 1244490:1245064)    	chr15:40350132-40351716(probes 1244499:1244500)  	0.19778	    0.19282		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	1	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	1	0	1	1	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	0	0	1	0	1	0	0	0	0	0	1	1	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	
Deletion Peak 22	16q23.1 	chr16:78129058-79627770(probes 1313946:1315311)  	chr16:78129058-79247026(probes 1313946:1314959)    	chr16:78583258-78586506(probes 1314453:1314454)  	0.15925	      0.159		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	
Deletion Peak 23	17q22   	chr17:50947516-60147907(probes 1342667:1347958)  	chr17:56426873-56498380(probes 1346249:1346284)    	chr17:49762297-81195210(probes 1341811:1358537)  	0.0021697	  0.0021697		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	1	0	1	0	0	0	1	0	1	0	0	0	1	0	0	1	1	1	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	0	1	1	0	0	1	0	0	0	0	0	0	1	0	1	0	1	0	0	1	
Deletion Peak 24	18p11.32	chr18:1-5751574(probes 1358538:1361391)             	chr18:1-330689(probes 1358538:1358538)                 	chr18:1-1612988(probes 1358538:1359028)             	0.11506	    0.11528		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	1	0	1	1	1	1	0	0	0	0	0	1	0	0	1	0	1	0	1	1	1	1	0	1	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	1	0	1	0	0	1	1	0	1	1	0	0	0	0	0	1	0	0	0	1	1	0	0	1	1	0	0	0	0	0	1	0	1	1	0	1	0	1	1	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	
Deletion Peak 25	18q21.2 	chr18:48514396-48920689(probes 1385139:1385466)  	chr18:48552482-48616860(probes 1385161:1385286)    	chr18:40858767-67408207(probes 1380147:1396605)  	3.2095e-13	 3.2095e-13		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	1	1	0	1	1	1	1	1	1	1	0	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	0	0	0	0	1	1	1	0	0	1	1	0	0	1	1	0	1	0	1	1	1	1	1	1	1	1	0	0	1	1	0	1	1	1	1	1	0	1	1	1	1	0	1	1	1	1	1	1	0	1	1	1	1	1	1	0	1	1	1	0	0	1	1	1	0	0	1	0	1	0	1	0	
Deletion Peak 26	19p13.3 	chr19:1-59128983(probes 1401220:1425180)           	chr19:2094593-2284010(probes 1401556:1401608)        	chr19:2123040-2299388(probes 1401562:1401610)      	0.22406	    0.23145		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	1	0	1	1	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	0	
Deletion Peak 27	19q13.41	chr19:41395276-59128983(probes 1418087:1425180)  	chr19:48312828-55552707(probes 1420883:1423506)    	chr19:46911183-50976533(probes 1420313:1421860)  	0.098163	    0.09626		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	
Deletion Peak 28	21q21.1 	chr21:1-31585156(probes 1462480:1472896)         	chr21:18805939-18986726(probes 1464551:1464665)    	chr21:1-25744823(probes 1462480:1468788)         	0.073658	   0.074941		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	1	0	1	0	0	1	1	0	0	1	1	1	0	1	0	0	1	1	0	1	0	1	1	0	1	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	1	1	1	0	1	0	1	0	1	0	1	1	0	0	1	1	1	0	0	0	0	0	0	0	0	0	1	0	1	0	1	1	1	0	0	1	0	1	1	0	0	0	0	0	0	0	0	1	0	1	0	1	1	
Deletion Peak 29	22q13.31	chr22:43805179-51304566(probes 1495960:1500006)  	chr22:46300770-46512954(probes 1497797:1497852)    	chr22:42776969-51304566(probes 1495451:1500006)  	0.0071172	  0.0069079		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	0	1	0	0	0	1	1	1	1	0	0	0	1	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	1	1	1	0	1	0	1	0	1	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0	1	0	1	0	0	0	1	1	1	1	1	0	0	0	1	1	0	0	1	0	0	1	0	0	0	1	0	1	1	
Amplification Peak  1 - CN values	1p34.2  	chr1:31385322-44557362(probes 14809:21959)        	chr1:41107240-42223908(probes 19871:20531)        	chr1:41107240-42227600(probes 19871:20534)        	0.1948	     0.1948		Actual Copy Change Given	0.0063871	-0.00097017	0.023286	0.0048579	0.0016085	-0.088848	0.0031976	-0.030404	-0.044551	-0.2414	-0.13255	-0.030677	-0.20709	0.067375	0.0014749	0.14021	-0.46014	0.016425	-0.0051227	0.047694	0.01034	-0.002245	0.010842	-0.10657	0.0077783	-0.00055444	-0.75668	3.1331	0.022319	-0.86082	0	-0.016292	0.0050458	0	0.11091	-0.044822	-0.030799	-0.0073339	0.0036974	-0.18854	0.0041632	-0.015652	0.029466	-0.046177	0.10462	0	0.024082	0.0068342	-0.0043489	-0.057979	0.008632	-0.33479	0	0.00069327	0.0080567	0.0068044	0.015045	-0.21152	-0.012713	-0.063289	-0.17056	-0.0085766	1.3865	0.012097	-0.24039	-0.0022168	-0.00046484	-0.12108	-0.081208	-0.042381	-0.0096814	0.0027745	-0.027888	-0.23116	-0.0097054	-0.11493	0.038667	-0.44167	0.036886	0.016535	-0.16064	-0.41058	-0.14361	0.017824	0.097542	-0.25697	-0.00055444	-0.53713	0	0.0094491	0.14056	0	-0.0050284	0.15889	-0.017803	0.013279	0.050923	0.0042127	0.033408	-0.0019245	0	-0.39429	
Amplification Peak  2 - CN values	1p12    	chr1:120204209-120523901(probes 67638:67828)    	chr1:120204250-120522600(probes 67639:67827)    	chr1:120033850-120527360(probes 67545:67830)    	0.012572	   0.012572		Actual Copy Change Given	0.024969	-0.00097017	0.023286	0.0015906	0.0016085	-0.088848	0.0031976	-0.030404	-0.044551	1.7718	0.043762	-0.030677	2.6316	0.067375	0.0014749	0.14021	0.44308	0.016425	0.021043	0.047694	0.0063031	0.0067761	-0.005034	1.3258	0.0077783	-0.00055444	-0.76552	0.02921	0.02274	0.020063	0	-0.00031051	0.0050458	0	0.11091	-0.044822	-0.030799	-0.0073339	0.0036974	-0.18854	0.0041632	-0.015652	0.029466	0.33254	0.10462	0	0.024082	0.0068342	0.0044411	-0.057979	0.008632	-0.33479	0	0.00069327	-0.0062286	0.0068044	0.11206	-0.21152	-0.012713	-0.063289	-0.17056	0.006775	-0.0022168	0.012097	-0.23153	-0.0022168	0.08874	0.10921	-0.081208	-0.042381	2.0934	0.0027745	-0.027888	-0.23116	-0.0075404	-0.10951	0.038667	0.0178	0.036886	0.019783	0.24668	-0.41251	-0.10381	-0.67775	0.097542	0.63134	0.14622	-0.53713	0	0.0094491	0.13495	0.0020687	-0.0050284	0.15889	0.012655	0.013279	0.050923	0	0.025952	0.00010739	0	-0.43326	
Amplification Peak  3 - CN values	6p21.31 	chr6:35905507-35984482(probes 591036:591073)      	chr6:35906439-35981329(probes 591037:591072)      	chr6:35906439-35991473(probes 591037:591075)      	0.022451	   0.022451		Actual Copy Change Given	-0.64659	0	-0.0069195	-0.0034627	-0.0069195	-0.15975	-0.048065	-0.018216	0.014888	-0.039741	-0.080541	-0.14785	-0.21651	-0.15477	-0.000726	-0.062361	-0.22576	-0.061342	-0.63357	0.084787	-0.0053446	-0.031523	-0.0078863	-0.021039	3.0648	-0.37413	0.021884	-0.3092	-0.29022	-0.37042	-0.00069303	-0.16354	-0.0029988	0.00013863	-0.18803	-0.083333	-0.15356	-0.023155	-0.024891	0.35231	-0.23012	-0.030451	0.0012481	0.38072	0	0.010564	-0.033313	-0.0042633	-0.084395	-0.031025	-0.31339	0.1136	-0.10579	-0.15822	-0.0030475	0.0070826	-0.072158	-0.21276	-0.15031	0.0079301	-0.016567	0.0044411	-0.024935	-1.2619e-05	-0.22334	0.011679	-0.0020268	-0.12265	-0.23655	0.0033299	-0.19739	-0.0004935	0.011179	-0.27846	-0.0082045	-0.60899	-0.032278	-0.44997	0.0172	-0.57591	-0.18861	0.085943	-0.0031859	-0.0084385	-0.47976	0.19416	-0.053605	0.023312	-0.49715	-0.0033243	-0.0091286	0.021171	-0.068663	0.2861	-0.40252	-0.0049188	-0.43311	-0.0013365	2.8598	0.0081438	-0.20406	-0.1349	
Amplification Peak  4 - CN values	7q22.1  	chr7:97568629-99186825(probes 716662:717310)      	chr7:98406354-98982024(probes 717063:717252)      	chr7:97524031-100224010(probes 716659:717684)    	0.0012448	  0.0012448		Actual Copy Change Given	-0.065716	0.0033299	0.021603	0.0024969	0.022585	0.0098669	-0.0017948	0.41588	0.010982	0.017606	0.053379	0.32854	0.017707	0.26718	0.0027745	0.15459	0.013213	0.018029	3.6569	0.034536	-0.012225	-0.0021065	0.00013863	0.071822	1.0103	0.0075	0.00069327	0.64528	0.010021	0.0079808	-0.0015243	-0.28001	0.0040732	0.018243	0.012546	0.11038	0.017326	0.025531	0.001199	0.23842	-0.0015243	-0.0026806	-0.014067	0.11701	0.062223	0.010285	0.035196	0.0006923	0.0087528	1.2342	-0.085085	0.16295	-0.0011087	0	0.035947	0.00041593	0.19352	-0.22129	0.0083351	0.014254	-0.03771	0.21945	0.0090815	0.019503	0.20457	0	0.0015714	0.11852	0.061363	0.019783	0.1535	-0.0022944	0.0078359	0.17987	-0.07464	0.20098	0.024445	0.021043	0.0026357	0.015727	0.18722	0.35528	0	0.60395	0.29915	-0.23765	0.13125	0.090575	3.6569	0	0.32551	-0.0041664	0.023145	0.23337	0.021463	0.38328	0	0.031205	-0.14361	0.0444	0.16971	0	
Amplification Peak  5 - CN values	8q24.21 	chr8:127864635-128801947(probes 819164:819880)  	chr8:128107201-128800300(probes 819371:819879)  	chr8:113366166-146364022(probes 810013:829804)  	1.1477e-05	 1.1477e-05		Actual Copy Change Given	0.60286	-0.00013862	0.0095883	0.012795	0.020623	0.0087528	-0.01312	0.40227	0.53538	0.13516	-0.13018	0.028763	0.020343	0.15547	0.028763	0.045566	0.011679	0.19208	0.020483	0.070673	0.83734	1.1592	0.0023581	0.041458	1.0266	0.0095883	0.0029133	0.63119	0.19529	0.0041801	0.0020805	0.82151	-0.0098165	0.0013868	0.22453	-0.063032	0.021946	0.037076	0.0015672	3.6569	0.10848	0.035474	0.067518	0.3887	0.20289	-0.0016629	0	-0.0050931	-0.038306	0.07815	-0.079816	0.17905	0.0033831	-0.0063668	0.0048161	-0.0020784	0.038558	0.1687	0.36104	0.13378	-0.024251	0.30767	0.39015	0	0.59027	0.0036076	0.00032315	0.22901	0.65148	0.082043	0.32873	0	0.011732	0.42963	0.03514	0.20789	0.08136	0.44528	0.027216	0.54612	0.56881	0.84218	0.93936	1.742	0.030451	-0.24655	0.14191	0.64268	0.0090312	-0.010784	-0.00097017	0.45666	0.04812	0.27756	1.7252	0.0015913	-0.011335	0.000604	0.17694	0.026924	0.16205	0.086377	
Amplification Peak  6 - CN values	9p13.3  	chr9:35244633-35825412(probes 850940:851194)      	chr9:35414557-35557695(probes 851019:851083)      	chr9:35029880-36088647(probes 850829:851359)      	0.025293	   0.025293		Actual Copy Change Given	-0.6464	0.00041593	-0.0079581	-0.0024938	-0.34125	-0.27643	-0.021035	-0.50784	0.0095883	0.011741	0.069525	-0.21032	0.50811	-0.15067	-0.37324	-0.032996	-0.47554	-0.13923	-0.69351	-0.044686	1.0711	-0.61818	0.0034687	0.057939	0.05694	-0.0023553	0.021744	0.064537	-0.11755	-0.012162	-0.0008316	-0.28358	-0.010735	-0.0016629	0.5926	0.0015255	-0.070343	-0.03553	-0.040602	-0.1678	-0.0011087	-0.053928	-0.010094	1.4697	-0.13199	-0.00069303	-0.14648	-0.0064844	-0.082801	-0.16357	-0.14497	-0.34377	-0.076278	-0.00027724	0.3766	-0.00013862	-0.10895	0.29427	-0.16914	-0.10249	-0.060076	-0.33479	-0.0049844	-0.13061	-0.33422	-0.30345	-0.0030017	-0.027124	0.054658	0	0.16668	-0.043737	1.3912	-0.3567	-0.030591	-0.63083	-0.020239	-0.0013858	-0.031359	-0.016704	-0.0068413	0.83805	0.0069435	-0.68852	-0.44027	-0.15413	0.14816	-0.52798	-0.4985	-0.0031859	-0.0034627	-0.01052	-0.0033243	0.044555	0.35675	-0.008235	-0.00069303	-0.00078224	0.18692	-0.039928	-0.051316	-0.42287	
Amplification Peak  7 - CN values	11p11.2 	chr11:24893542-56013797(probes 994535:1009301)   	chr11:46069665-46082094(probes 1007856:1007862)  	chr11:46069665-46087487(probes 1007856:1007865)  	0.19066	    0.19066		Actual Copy Change Given	0.010006	0	0.0012481	-0.0008316	-0.0042469	-0.25745	0.0016708	1.2319	0.0068044	0.012159	-0.046177	0.033549	3.6569	-0.056173	-0.0029091	-0.079609	-0.1876	0.019363	0.015587	-0.01037	0	-0.0001668	0.0047629	-0.017391	0	-0.00041585	-0.36577	0.032448	-0.13483	0.010982	0.0015255	0.00027728	-0.0025835	-0.0008316	0	-0.043059	0.01174	0.018943	0.0010603	0.050222	-0.00097017	0.0018933	-0.015466	0	-0.099341	0.001803	0.029842	0.00090292	0.0030522	0.066945	-0.046929	0.043865	-0.00041585	0.0015255	0.0040243	0.0026357	-0.04462	0.047599	0.23985	0.099301	-0.0041546	-0.13329	-0.0030475	0.016146	0.1783	0.0022193	0.0036536	-0.10156	0.059364	-0.053611	0.15425	-0.01354	-0.01362	0.20396	-0.0064659	0.19573	-0.050335	0	-0.0037395	-0.0026322	0.2442	0.11125	0.044574	-0.65094	-0.3424	0.1634	0.13051	0.015727	0.0022193	0.0037465	0.00069327	0.0037346	0.008892	0.56345	0.0094491	-0.0060248	0.0038854	0.00018803	-0.13497	0.0046876	-0.0098185	-0.018353	
Amplification Peak  8 - CN values	12p13.33	chr12:1-5520802(probes 1056053:1058882)             	chr12:2232158-2340418(probes 1056476:1056528)      	chr12:1-5521559(probes 1056053:1058884)             	0.0017326	    0.00247		Actual Copy Change Given	0.66734	-0.0018014	0.0030522	-0.0075624	0.012655	0.0038854	0.0056985	0.0098669	0.016705	0	0.08161	-0.21602	-0.18055	-0.045672	-0.0027707	0.0016642	0.48975	-0.036538	-0.021784	-0.014778	-0.0054828	0.47543	-0.58559	0.067931	-0.029584	0.0036076	-0.76355	3.6569	0.038928	-0.35938	0.0020805	0.18283	-0.0036908	-0.00027724	0.0040243	-0.010232	-0.033208	0.041175	0.034345	0.22342	-0.00069303	0.0011996	-0.0089906	-0.10026	0.087245	-0.0010127	0.029561	0.018833	-0.37144	0.094927	-0.097173	0.1431	-0.0037395	-0.049695	-0.0032915	0.0087528	-0.03402	0.26472	0.036794	0.016158	0.0091705	0.011577	3.201	-0.069332	-0.23545	0.0058309	-0.003417	0.046842	0.13613	-0.035721	-0.19989	-0.015329	0.007001	0.13155	0.053846	-0.60502	-0.0014878	0.013074	-0.029448	0.59134	0.1348	0.89629	0.018243	0.014749	1.0053	0.090285	-0.060211	0.037641	-0.01051	0.0016642	-0.0015243	0.019631	-0.070135	3.438	0.0026357	0.012024	0.0051359	-0.0024444	0.031014	-0.0026634	-0.0013858	0.044563	
Amplification Peak  9 - CN values	12p12.1 	chr12:19727978-29419459(probes 1066712:1072991)  	chr12:25209765-25210135(probes 1070130:1070130)  	chr12:19728487-28247597(probes 1066713:1072289)  	0.0022878	    0.10344		Actual Copy Change Given	0.5697	-0.0018014	0.0030522	-0.0019399	0.012655	0.0038854	0.0056985	0.0098669	0.016705	0	0.08161	0.30473	0.42536	-0.056442	-0.0027707	0.0016642	0.48975	-0.036538	-0.021784	-0.014778	-0.0054828	0.47543	0.57505	0.069239	-0.029584	0.0036076	-0.76355	3.6569	0.038928	0.29056	-0.00069552	0.65848	-0.0036908	-0.00027724	0.0040243	-0.010232	-0.033208	0.041175	-0.0098673	0.22342	-0.00069303	0.0011996	-0.0089906	0.38998	-0.0073912	-0.0010127	0.029561	0.018833	1.72	-0.39328	0.4764	0.1431	-0.0037395	-0.049695	-0.0032915	-0.0022168	-0.03402	0.26818	0.036794	0.016158	0.0091705	0.011577	0.0068044	-0.069332	1.467	0.0058309	-0.003417	-0.048342	0.13613	-0.035721	-0.19989	-0.015329	0.007001	0.41982	0.053846	-0.60022	-0.0014878	0.013074	-0.029448	1.1722	0.1348	0.92817	0.018243	0.66401	-0.45219	0.090285	-0.060211	0.037641	-0.0045695	0.0016642	-0.0015243	0.019631	-0.070135	0.057635	0.0026357	0.012024	0.0051359	-0.0024444	0.031014	-0.0026634	-0.0013858	0.044563	
Amplification Peak 10 - CN values	12p11.21	chr12:31414318-31442221(probes 1074355:1074366)  	chr12:31414474-31440450(probes 1074356:1074365)  	chr12:30846561-32410586(probes 1074044:1074914)  	0.0092151	   0.021088		Actual Copy Change Given	0.0098669	-0.0018014	0.0030522	-0.0019399	0.012655	0.0038854	0.0056985	0.0098669	0.016705	0	0.08161	-0.090361	0.42536	-0.056442	-0.0027707	0.0016642	0.48975	-0.036538	-0.021784	0.0051359	-0.0054828	0.44525	0.57505	0.069239	-0.029584	0.0036076	-0.76355	1.2299	0.038928	0.021463	-0.00069552	0.19573	-0.0036908	-0.00027724	0.0040243	-0.010232	-0.033208	0.041175	-0.0098673	0.22342	-0.00069303	0.0011996	-0.0089906	0.38998	-0.0073912	-0.0010127	0.029561	0.018833	-0.36295	3.3662	1.2271	0.1431	-0.0037395	-0.049695	-0.0032915	-0.0022168	-0.03402	0.26818	0.036794	0.016158	0.0091705	0.011577	0.0068044	-0.069332	1.467	0.0058309	-0.003417	-0.048342	0.13613	-0.035721	-0.19989	-0.015329	0.007001	0.41982	0.053846	-0.60022	-0.07245	0.013074	-0.029448	-0.5711	0.1348	0.92817	0.018243	0.010564	-0.45219	0.090285	-0.060211	0.037641	-0.0045695	0.0016642	-0.0015243	0.0045152	-0.070135	0.057635	0.0026357	0.012024	0.0051359	-0.0024444	0.031014	-0.0026634	-0.0013858	0.044563	
Amplification Peak 11 - CN values	12q15   	chr12:68307608-70989876(probes 1091992:1093872)  	chr12:68393163-68418829(probes 1092065:1092087)  	chr12:68114499-71147292(probes 1091865:1093973)  	0.0044655	  0.0044655		Actual Copy Change Given	0.015447	-0.0018014	-0.0017159	-0.0019399	0.0037684	0.0038854	0.0056985	-0.013127	0.016705	0	-0.11581	-0.090361	1.5908	-0.056442	-0.0027707	0.0016642	-0.46897	-0.036538	2.4407	0.0051359	0.0026906	3.6569	-0.0045695	0.069239	-0.029584	0.0036076	-0.76355	1.84	0.038928	0.021463	-0.00069552	-0.28928	-0.0036908	-0.00027724	0.0040243	-0.010232	-0.033208	-0.0071958	-0.0098673	0.22342	-0.00069303	0.0011996	-0.0089906	-0.30814	-0.0073912	-0.00055444	0.029561	0.018833	0.10906	0	0.14153	-0.33144	-0.0037395	-0.049695	0.0012481	-0.0022168	-0.035382	0.25313	0.036794	0.0098795	0.0091705	-0.32126	0.0022193	-0.069332	-0.22207	-0.30862	-0.00078588	-0.048342	-0.198	-0.035721	-0.19989	-0.015329	0.007001	-0.13691	-0.09482	0.038489	-0.07245	1.3159	-0.0092942	0.023847	0.1348	0.60774	0.010651	0.010564	-0.45219	0.090285	-0.060211	0.029629	-0.0045695	0.0016642	-0.0015243	0.0045152	-0.070135	0.057635	0.0026357	0.012024	0.0051359	-0.0024444	0.031014	-0.0026634	-0.0013858	0.045991	
Amplification Peak 12 - CN values	17p11.2 	chr17:19277362-19895201(probes 1330443:1330774)  	chr17:19279467-19543197(probes 1330444:1330556)  	chr17:19279467-19543971(probes 1330444:1330559)  	0.072178	   0.072178		Actual Copy Change Given	-0.60719	0.00055459	0.0023581	0.00083195	0.021744	-0.010922	-0.029714	3.0389	-0.063166	-0.51337	0.010285	-0.13523	-0.1827	-0.038986	-0.0012473	0.013772	-0.47757	-0.072274	-0.0087146	-0.034631	-0.45003	-0.54443	0.0076392	-0.044551	-0.63547	1.6048	0.036617	-0.31188	0.0083503	-0.0069195	-0.0024938	-0.29355	-0.0042442	-0.0038779	-0.077345	-0.011473	-0.071146	-0.020824	-0.019088	-0.40088	0.70457	-0.0050328	-0.02151	-0.16103	-0.073209	-0.00055444	-0.036718	0.0015552	-0.016781	-0.20477	-0.19344	-0.34297	-0.053611	-0.12726	-0.00041585	-0.55877	0.0082639	-0.21127	-0.046989	0.011413	0.0086135	-0.31412	0.30362	-0.039258	-0.24812	-0.022332	-0.04125	0.026373	-0.011751	0.006109	-0.23299	-0.027206	-0.03253	-0.3634	0.018842	-0.61987	0	-0.45886	-0.030131	-0.53906	-0.018585	0.06208	-0.34125	-0.6509	-0.57219	0.18192	-0.27392	-0.56595	-0.49965	-0.0087146	0.03031	-0.0087264	-0.021921	-0.080026	-0.38638	-0.080877	-0.42626	-0.0018905	-0.17272	-0.033844	-0.042652	-0.6332	
Amplification Peak 13 - CN values	17q21.32	chr17:43500951-54883634(probes 1339409:1345204)  	chr17:46157895-46173126(probes 1340099:1340105)  	chr17:46157895-46190580(probes 1340099:1340108)  	0.14504	    0.14504		Actual Copy Change Given	-0.60719	0.00055459	0.0023581	0.00083195	0.021744	-0.010922	-0.029714	1.2259	-0.063166	0.026857	0.010285	-0.13523	-0.1827	-0.038986	-0.0012473	0.013772	0.018613	-0.072274	-0.0087146	-0.034631	0.82302	0.0031628	0.0076392	-0.044551	0.047126	-0.0062286	0.036617	0.21011	0.0083503	-0.0069195	-0.0024938	0.22854	-0.0042442	-0.0038779	-0.077345	-0.011473	0.0095106	-0.020824	-0.019088	0.051217	0.0012481	-0.0050328	-0.02151	-0.16103	-0.073209	-0.00055444	-0.036718	0.0015552	-0.016781	1.8645	-0.19344	0.059508	-0.053611	-0.051222	-0.00041585	0.0062481	0.0082639	0.25814	-0.046989	0.011413	0.0086135	-0.31412	-0.011473	-0.039258	-0.24812	-0.022332	-0.04125	0.026373	-0.011751	0.70757	0.16308	-0.0027707	-0.03253	-0.052531	0.018842	-0.28073	0	0.0075303	-0.030131	-0.53906	-0.018585	0.06208	0.11257	-0.6509	-0.37504	0.18192	0.10935	-0.067592	-0.0083005	-0.0087146	0.03031	-0.0087264	-0.021921	-0.080026	0.030732	-0.080877	0.003191	-0.0018905	-0.17272	-0.033844	-0.042652	0.012097	
Amplification Peak 14 - CN values	18q11.2 	chr18:19704037-20000875(probes 1367187:1367361)  	chr18:19826743-19876380(probes 1367253:1367283)  	chr18:18694023-22493883(probes 1366758:1368950)  	2.3348e-10	 2.3348e-10		Actual Copy Change Given	1.9466	-0.096968	-0.03504	-0.017116	0.22746	-0.199	-0.0087081	0.73872	-0.26997	1.9563	-0.12772	-0.067458	-0.093006	0.43716	-0.013206	1.7945	-0.46664	-0.0081624	1.415	-0.17322	1.2374	0.022556	0.5003	-0.12486	2.9792	0.38866	0.94139	-0.29896	0.011973	0.33707	0.00069327	-0.0088526	-0.01803	-0.0030475	0.19269	-0.10644	-0.12999	-0.024524	-0.029633	-0.050127	-0.15528	-0.017989	-0.056442	0.24684	-0.12421	0.0063871	-0.17276	-0.0068899	0.021043	-0.19487	0.63489	0.46519	-0.15119	-0.18395	0.33375	1.2034	-0.011268	-0.079964	-0.16536	0.32722	-0.019863	0.0029133	0.34323	-0.1431	1.1921	0.047836	-0.058417	-0.19124	-0.19437	-0.12317	0.48317	-0.0076101	1.232	0.51037	0.30622	0.18813	-0.13118	-0.45522	-0.024798	-0.60284	1.8405	0.27789	1.0755	0.024548	0.088258	0.060794	-0.25612	0.20473	0.51874	-0.021098	-0.0047079	0.022713	-0.036265	-0.2091	-0.0060904	-0.02213	0.44935	-0.0082513	-0.23092	-0.076042	-0.02603	0.10921	
Amplification Peak 15 - CN values	19q13.2 	chr19:38513399-40880126(probes 1416760:1417918)  	chr19:39697975-40005004(probes 1417307:1417402)  	chr19:38217345-41165251(probes 1416602:1417983)  	0.0026115	  0.0026115		Actual Copy Change Given	0.053237	0.0019418	0.016006	-0.0084237	0.012516	-0.013953	-0.0017243	0.27947	0	0.02433	0.94772	0.045282	0.64781	0.080168	-0.00097017	0.0072217	0.026654	-0.033132	0.58935	0.041741	-0.014036	0.53903	0.00597	0.92614	0.34518	0.32914	0.023016	-0.019976	0.33369	0.00055459	-0.00013862	0.22268	0.0096374	0.0065262	-0.012438	0.0077783	0.13176	-0.0030475	0.01442	-0.10055	-0.046448	-0.0082107	0.014609	0.097833	0.037641	-0.0048461	0.021838	-0.0016332	1.2463	0.57826	0.047473	0.060794	-0.0037395	-0.0049844	0.0011093	0.019363	0.046486	-0.19233	0.039902	0.028494	0.01433	0.034536	-0.029448	-0.1259	0.52133	-0.0094046	-0.0032786	0	0.059506	0.21223	1.285	0.0084743	-0.0013285	0.10687	0.072368	0.10877	0.00072987	1.2432	0.015587	0.035524	0.2523	-0.136	-0.029175	1.5396	0.22191	-0.044551	-0.028816	-0.045499	0.42738	0.0037465	0.015168	-0.025221	-0.014916	0.10466	0.021043	0.0088188	0.012097	0.002324	0.18889	-0.0051539	0.16219	0.039054	
Amplification Peak 16 - CN values	20q13.2 	chr20:50935475-59107639(probes 1454769:1460866)  	chr20:51395648-51437828(probes 1455104:1455129)  	chr20:51093874-51645373(probes 1454875:1455241)  	0.1263	     0.1263		Actual Copy Change Given	0.70532	0.0012481	0.010285	0.0084743	0.0048579	0.00069327	0.0077502	0.36641	0.13435	0.035163	0.001532	0.081322	0.016845	0.15679	-0.0053992	0.013632	0.023145	0.11785	0.013353	0.046275	0.0069985	0.55294	0.013492	0	0.047196	-0.0087146	0.01485	0.34651	0.52785	0.0063871	-0.010094	0.22468	0.0040732	0.0015255	-0.0096806	0.030169	0.01523	0.0070826	-0.0019889	0.37987	-0.0060558	0.067898	0.0083351	0.0023581	0.1041	0.0086135	0.028998	-0.0030179	-0.15272	0.064225	0.29588	0.11477	-0.0055375	0.10205	-0.34653	0.0097276	0.031927	0.29665	3.6569	-0.068919	0.006109	0.012516	0.38469	-0.08413	0.53749	0.0062481	0.0062941	-0.010784	0.30969	0.036088	-0.02208	-0.0022595	-0.012381	0.19786	-0.0040488	0.18268	-0.00040563	-0.012162	0.036512	0.61371	-0.0049844	0.15816	0.52013	0.65204	0.19801	0.37585	0.10468	0.0026701	-0.0062286	-0.0016629	0.0098669	-0.011485	0.010424	-0.16474	-0.0013858	0.36223	-0.023429	-0.00036647	-0.12979	-0.013063	0.19132	0.11946	
Amplification Peak 17 - CN values	Xp22.11 	chrX:23975644-23983593(probes 1508794:1508801)    	chrX:23976894-23983115(probes 1508795:1508800)    	chrX:23976894-23993915(probes 1508795:1508803)    	0.0105	     0.0105		Actual Copy Change Given	-0.10622	3.6569	-0.036265	3.6569	-0.017803	-0.037354	0.011407	-0.037626	0.056513	-0.4018	-0.035721	-0.016429	-0.05496	0.014051	-0.033977	-0.0091286	-0.14232	-0.078411	-0.1968	0.0076392	-0.037028	-0.023457	-0.0080244	0.018943	-0.078411	-0.043602	-0.17929	-0.093247	-0.17574	-0.061689	0.012097	-0.012024	0.0032545	0.0033299	0.10848	-0.0019399	-0.24783	0.0086135	-0.01524	0.04143	-0.01354	0.00092217	0.0023133	-0.021784	-0.27703	0.0041632	-0.012345	0	-0.04726	-0.0015243	0.092129	-0.07361	-0.0064218	-0.017944	-0.012926	-0.060345	0.0042311	0.035289	-0.0088526	-0.022046	0.00069327	-0.098814	0.048404	-0.038442	0	-0.074811	-0.0067356	0.0062481	0	0.00097064	0.037417	-0.0048461	-0.0035439	-0.041702	0.0033692	-0.096968	-0.0085402	-0.074678	0.003191	-0.085059	-0.33272	-0.58196	0.010424	-0.08094	0.37677	0.023566	0.028903	-0.13051	-0.076331	0.005035	0.067915	0.014458	-0.10893	0.33721	-0.061823	0.025317	-0.057924	0.0043516	-0.058866	0.0046876	0.052668	-0.15961	
Amplification Peak 18 - CN values	Xq27.1  	chrX:138564705-138580557(probes 1556882:1556888)	chrX:138564964-138580376(probes 1556883:1556887)	chrX:138564964-138580758(probes 1556883:1556890)	0.0092471	  0.0092471		Actual Copy Change Given	3.6569	-0.0084385	0.015028	-0.0037678	-0.023429	-0.060384	-0.021539	-0.037626	-0.0059522	0.19412	-0.035721	-0.016429	-0.041974	0.014051	-0.033977	-0.0091286	-0.19829	0	-0.1968	0.0076392	-0.037028	-0.023457	-0.0080244	0.018372	-0.094688	-0.05154	-0.18277	3.6569	0.12095	-0.061689	-0.00047394	-0.015466	0.0053238	-0.00038912	-0.097477	-0.0019399	0.12154	0.0094491	0.01442	0.04143	-0.01354	0.00092217	-0.0018962	0.058081	0.22715	0.0041632	-0.012345	0.004054	-0.04726	-0.011198	-0.033753	-0.07361	0.0012481	-0.016017	-0.012024	-0.060345	0.0042311	0.0021269	-0.017559	-0.022046	0.00069327	0.1936	0.053948	-0.023155	0	-0.078559	-0.0067356	0.0023581	0.0065925	0.00097064	0.040162	-0.0048461	-0.0035439	-0.041702	0.0033692	-0.096968	-0.0085402	-0.074678	0.003191	-0.10684	0.30218	0.29437	0.001803	-0.078943	-0.35476	0.01861	-0.015191	-0.1246	-0.061958	0.015168	0.047836	0.023554	0.041458	-0.21777	-0.074955	0.025317	-0.039665	0.0043516	-0.058866	0.0046876	0.052668	0.0020805	
Deletion Peak  1 - CN values	1p36.32 	chr1:1-31412918(probes 1:14818)                    	chr1:4708988-4845111(probes 926:1027)                 	chr1:1-31282891(probes 1:14728)                    	0.062532	    0.10924		Actual Copy Change Given	0.060508	-0.00097017	0.0019418	-0.0029091	0.0083235	-0.088848	0.0031976	-0.089363	-0.044551	-0.23576	-0.13255	-0.030677	-0.20709	0.067375	-0.37943	-0.27021	-0.46653	0.016425	-0.0051227	-0.016982	0.0092256	0.58386	0.027919	-0.10657	0.6524	-0.00055444	-0.75668	-0.32412	-0.2922	0.0033299	0	-0.03891	0.0050458	0	0.19132	-0.044822	-0.030799	-0.011473	0.0036974	-0.16564	0.0041632	-0.044341	-0.060748	-0.046177	0.10462	0	0.024082	0.0068342	-0.0043489	-0.057979	0.008632	-0.33479	0	0.00069327	0.0080567	0.5463	0.015045	-0.21152	-0.014663	-0.063289	-0.17056	0.3348	-0.020961	0.012097	-0.24039	-0.0022168	-0.00046484	-0.12108	-0.081208	-0.042381	-0.017826	0.0027745	-0.027888	-0.23116	-0.0097054	-0.11493	0.038667	-0.0076101	0.036886	0.046417	-0.16064	-0.41058	-0.14361	0.52206	0.097542	-0.25697	-0.13728	-0.094064	0	0.0094491	0.16235	-0.51178	-0.0050284	-0.32914	-0.017803	0.013279	0.050923	0.0042127	0.033408	-0.006213	-0.0036943	-0.32496	
Deletion Peak  2 - CN values	1p36.11 	chr1:20435467-31265856(probes 9443:14720)         	chr1:27101202-27341204(probes 12761:12835)          	chr1:1-31282891(probes 1:14728)                    	0.0056542	   0.072021		Actual Copy Change Given	0.060508	-0.00097017	0.023286	0.0048579	0.0016085	-0.088848	0.0031976	-0.030404	-0.044551	-0.2414	-0.13255	-0.030677	-0.20709	0.067375	-0.37943	-0.27021	-0.46014	0.016425	-0.0051227	-0.016982	-0.42861	-0.002245	-0.57989	-0.10657	0.0077783	-0.00055444	-0.75668	-0.32412	-0.2922	0.0033299	0	-0.03891	0.0050458	0	-0.26155	-0.044822	-0.030799	-0.0073339	0.0036974	-0.16564	0.0041632	-0.015652	0.029466	-0.046177	0.10462	0	0.024082	0.0068342	-0.0043489	-0.057979	0.008632	-0.33479	0	0.00069327	0.0080567	0.0068044	0.015045	-0.21152	-0.012713	-0.063289	-0.17056	-0.31319	-0.37887	0.012097	-0.24039	-0.0022168	-0.00046484	-0.12108	-0.081208	-0.042381	-0.42409	0.0027745	-0.027888	-0.23116	-0.0097054	-0.11493	0.038667	-0.44167	0.036886	-0.5351	-0.16064	-0.41058	-0.14361	0.017824	0.097542	-0.25697	-0.010823	-0.53713	0	0.0094491	-0.32635	-0.51178	-0.0050284	-0.32914	-0.017803	0.013279	0.050923	0.0042127	0.033408	-0.006213	0	-0.31354	
Deletion Peak  3 - CN values	1p21.2  	chr1:93640821-149920615(probes 51936:67839)      	chr1:100101193-100161103(probes 55948:55986)      	chr1:100143393-100146430(probes 55968:55969)    	0.09364	    0.15609		Actual Copy Change Given	0.024969	-0.00097017	0.023286	-0.0027629	0.0016085	-0.088848	0.0031976	-0.030404	-0.044551	-0.25682	-0.12314	-0.030677	-0.20709	0.067375	0.0014749	0.14021	-0.46838	0.016425	0.021043	0.047694	0.0063031	0.0067761	-0.005034	-0.10657	0.0077783	-0.00055444	-0.77006	-0.29648	-0.27031	0.020063	0	0.0056919	0.0050458	0	0.11091	-0.044822	-0.030799	-0.0073339	0.0036974	-0.18854	0.0041632	-0.015652	0.029466	-0.046177	0.10462	0	0.024082	0.0068342	0.0044411	-0.057979	0.008632	-0.33479	0	0.00069327	-0.0062286	0.0068044	0.11206	-0.21152	-0.012713	-0.063289	-0.17056	-0.33202	0.024408	0.012097	-0.24039	-0.0022168	0.08874	0.10921	-0.081208	-0.042381	-0.0096814	0.0027745	-0.027888	-0.23116	-0.002593	-0.09855	0.038667	-0.44167	0.036886	0.0051023	-0.16064	-0.41251	-0.10381	-0.67775	0.097542	-0.24265	0.14622	-0.53713	0	0.0094491	0.13495	0.0020687	-0.0050284	0.15889	0.012655	0.013279	0.050923	0	0.025579	0.00010739	0	-0.43326	
Deletion Peak  4 - CN values	1q42.2  	chr1:1-249250621(probes 1:129198)                 	chr1:231497325-231568576(probes 118653:118693)    	chr1:231532512-231535583(probes 118674:118675)  	0.23145	    0.23145		Actual Copy Change Given	0.026514	-0.00097017	0.023286	0.0015906	0.0016085	0.2645	0.0031976	-0.030404	-0.044901	0.26867	0.078871	-0.030813	0.15965	0.067375	0.0062481	0.29756	0.44442	0.029184	0.021043	0.047694	0.43065	0.54344	0.56401	0.11785	0.0077783	-0.00055444	1.1648	0.02921	0.040822	0.020063	0	0.004407	0.0050458	0	0.22978	0.030169	0.015509	-0.0073339	0.0036974	-0.18854	0.0041632	-0.015652	0.029466	0.33254	0.10462	0	0.024082	0.0068342	0.0044411	0.28707	0.041238	0.11462	0	0.00069327	0.65885	0.0068044	0.11206	0.29649	-0.012713	0.02169	0.18783	0.0015255	0.0011093	0.012097	0.18828	-0.0022168	0.08874	0.10921	-0.081208	0.12049	0.32638	0.0027745	-0.027888	0.17106	0.039094	-0.10951	-0.0095698	0.0098669	0.076854	0.57558	0.26854	0.12371	-0.10381	0.01447	0.096816	1.4065	0.13954	0.028763	0	0.0023907	0.5003	0.35706	0.0049969	0.15889	0.012655	-0.37645	0.19527	0	0.029747	-0.0050496	0	0.5088	
Deletion Peak  5 - CN values	2p23.3  	chr2:1-59292261(probes 129199:163602)               	chr2:24803410-24993832(probes 144633:144731)        	chr2:24904326-24906638(probes 144683:144684)      	0.22322	    0.22322		Actual Copy Change Given	-0.012576	0.0044411	0	0	0.0041632	0.0030522	-0.0018834	0.36493	0.012376	-0.018567	0	0.03031	0.021323	0.0058309	0	0.0087528	0	0.082332	-0.27624	0.04983	-0.44906	-0.019479	-0.0043988	-0.0092368	0.041386	0.0013868	0	-0.29554	0	-0.0045135	-0.005261	0.0069435	0.0047679	0.00069327	-0.037966	0.095363	0	0.029184	-0.0019889	0.012906	0.0034687	0.0043925	0.0054139	0.023005	-0.025641	0.002471	-0.012483	-0.00044481	-0.36635	0.061365	0	0.037945	0.027022	0.097252	-0.0056757	-0.0018014	-0.03511	-0.22203	0.029044	-0.09946	0.14786	-0.33491	-0.0089906	0.010285	0.1658	-0.31844	-0.11661	-0.0069525	-0.2407	0.041741	0.14516	0.00091784	0.03657	0.15159	0	0.15024	0.0071193	-0.013587	-0.0090484	-0.0084385	0	0	0	0.0066653	-0.017191	-0.014969	-0.054555	-0.54229	0.00069327	-0.00056409	-7.1832e-05	-0.01424	0.0083351	-0.30101	-0.0123	0	-0.005261	0.0046295	0	0.037412	0.15382	0.020177	
Deletion Peak  6 - CN values	2q37.3  	chr2:202122502-243199373(probes 236375:260556)  	chr2:239748105-240337579(probes 259168:259337)    	chr2:240157422-240161306(probes 259253:259254)  	0.16182	      0.159		Actual Copy Change Given	0.025671	0.0019418	0	0	0.0013868	-0.00026534	0.0072283	0.36493	0.0071148	-0.018567	0	0.03214	0.021323	0.10877	0	0.0087528	0.00097064	0.022666	-0.27224	0.065226	0.0017191	0.52955	-0.0040162	-0.0082333	-0.67325	0.0013868	-0.00069303	0.024942	-0.064762	-0.031905	-0.005261	0.011539	0.0047679	0.00069327	-0.0027996	0.095363	-0.0063058	0.029184	-0.0019889	0.012906	0.0034687	0.0043925	-0.00094591	0.098997	0.063223	0.00298	-0.012483	0.0043319	0.011679	0.061365	0.076085	0.042307	0.23055	0.097252	-0.0056757	-0.0057421	-0.03511	0.22319	0.029044	-0.09946	0.14786	0.3153	-0.0087146	0.010285	0.17849	0.033408	-0.0078406	-0.0069525	0.068233	0.041741	0.13537	0.012516	-0.0010874	0.15159	-0.0076114	0.12815	0.0071193	0.0062481	0.018383	0.020903	0	0	0	-0.7028	0.020343	-0.01106	-0.063838	-0.015741	0.00069327	0.0077586	0.001803	-0.01424	0.0083351	-0.67469	-0.0123	0.0038124	-0.0016629	0.00088325	0	0.040577	0.15382	0.039619	
Deletion Peak  7 - CN values	3p24.1  	chr3:1-198022430(probes 260557:366983)            	chr3:30644579-30737294(probes 277368:277464)        	chr3:30700854-30701444(probes 277417:277418)      	0.23531	    0.24071		Actual Copy Change Given	-0.010646	0.00097064	-0.0056757	0.0020805	-0.0026322	-0.12161	0.0013933	-0.010902	0.28723	-0.014718	0.0054139	-0.041024	0	-0.022332	0.010842	-0.035448	-0.47649	0.024548	0	-0.011314	0.007555	-0.086943	-0.0022168	-0.011887	0.067986	0.052383	0.019363	0.024433	-0.10393	0.010564	0.0015255	-0.26444	-0.0076996	0	-0.1458	0.012655	-0.060286	0.010146	-0.063177	-0.21436	0.0033299	-0.00088003	-0.01106	-0.079476	-0.12525	-0.0019399	-0.029082	0.0002471	0.0058309	0.055943	-0.30587	-0.10395	0.0013868	0.0091259	-0.0037395	0.0051359	-0.071273	-0.83241	-0.19149	0.014622	0.0098669	0.32656	-0.35396	-0.053881	-0.2128	-0.31211	0.0018489	-0.0047079	-0.21553	-0.013677	0.16653	-0.036643	-0.05342	-0.14605	-0.015152	-0.10579	-0.046953	0.01433	-0.039054	0.008892	0.15412	-0.21491	0.079015	0.0076392	-0.49597	-0.24021	-0.10802	-0.050776	0.0041632	0	-0.011202	0.0031792	-0.054754	-0.017552	0.016599	-0.00047577	0.0041632	0.000604	0.026935	-0.049896	-0.043952	-0.34527	
Deletion Peak  8 - CN values	4q35.2  	chr4:148648862-191154276(probes 448396:469775)  	chr4:187206181-187461705(probes 468896:469021)    	chr4:187307980-187312282(probes 468959:468960)  	0.11324	     0.1104		Actual Copy Change Given	-0.016429	-0.0018014	-0.0062971	0.00097064	-0.015644	0.0064276	0.00083852	0.014888	-0.256	-0.0079632	-0.12161	0	-0.19762	0	0.0097276	-0.005261	-0.0043366	-0.068524	0.011818	-0.016841	-0.44055	0.00033031	0	-0.019726	-0.18974	0.003191	-0.78235	0.024293	0.090595	0.010611	0.0019418	-0.27129	-0.0061799	0.0015255	-0.12927	-0.007472	0.019844	-0.032041	0	0	0.0075	-0.024218	-0.062147	0.21021	-0.12317	-0.0022168	-0.14909	-0.0035715	-0.10788	-0.25986	-0.089111	0	0.00458	-0.0048461	-0.0081624	0	0.027144	-0.051406	0	-0.0036335	-0.0030475	-0.35133	-0.013815	0.021183	-0.20958	0.0012481	0	0.0081959	0.024406	-0.033405	-0.0012698	0.00013863	0.010064	0	-0.0017622	-0.46099	0.0026723	0.0057466	-0.038578	0.056798	-0.023703	-0.29471	-0.097627	0.021183	0.34112	0.0087528	0.025671	-0.52697	0.0056919	-0.0073339	-0.0071958	0.014737	0.0081959	0.052222	0.034486	0.0084011	0.0063321	-0.0021675	0.021323	-0.0075031	0.1631	-0.0026803	
Deletion Peak  9 - CN values	5q14.2  	chr5:82134980-82936981(probes 513796:514284)      	chr5:82372996-82655821(probes 513949:514099)        	chr5:73082094-110692711(probes 508347:528026)    	0.0069079	  0.0069079		Actual Copy Change Given	0	-0.0012473	0.010564	-0.00027724	-0.0057568	0.0091705	0.0037892	-0.45565	-0.26047	0.0055544	0.014556	0.022191	0.018245	-0.0018014	0.0019418	0.0019418	0.011978	-0.12434	0.035524	0.0086135	0.0059031	0.0038572	-0.0011087	0.06401	-0.6274	0	-0.77609	-0.3086	-0.26539	-0.052396	0.00069327	-0.26718	0.0033788	0.0016642	0.012376	0	0.022366	0	-0.062543	-0.1145	0.0086135	0.00050613	0.0056919	-0.022606	-0.21542	-0.00013862	0.02703	0.0028042	0.0069435	-0.0036011	0.046054	-0.34939	0.00069327	0.0048579	0.0012481	-0.0008316	0.0085423	-0.044234	-0.018902	0.01211	0.0034687	-0.34144	0.013911	0.011818	0.19619	0.0065262	0.0030981	0.0086135	-0.060213	0.046559	-0.30504	-0.0015702	0.011179	-0.3511	0.00087122	0.22022	0.00295	0.0095883	-0.00027724	0	-0.18609	-0.1651	-0.11404	-0.70064	-0.43007	-0.017666	-0.28192	-0.10893	0.0027745	0.0020805	0.0093098	-0.31156	-0.014228	-0.064392	-0.45554	0.022371	0.001803	-0.0021675	-0.13851	0.00024603	-0.040122	-0.060748	
Deletion Peak 10 - CN values	6p25.2  	chr6:1-10421806(probes 570327:577151)              	chr6:3151318-3232771(probes 571960:571995)            	chr6:1-9560551(probes 570327:576543)                	0.020364	   0.020364		Actual Copy Change Given	-0.65398	0	-0.0069195	-0.0034627	-0.0069195	-0.15975	-0.048065	-0.53368	0.014888	-0.039741	-0.080541	-0.14785	-0.21651	-0.15477	-0.00027724	-0.062361	-0.23459	0.024408	-0.6296	0.084787	-0.46074	-0.6127	-0.0078863	-0.021039	-0.28928	-0.37413	0.021884	-0.31223	-0.24483	-0.37042	-0.00069303	-0.17137	-0.0029988	0.0056919	0.0036076	-0.083333	-0.15356	-0.023155	-0.073276	0.40193	-0.23012	-0.030451	0.0012481	-0.076278	0	0.010564	-0.033313	-0.0042633	-0.084395	0.079735	-0.2916	-0.34481	-0.20596	-0.15822	-0.0030475	0.0070826	-0.072158	-0.21326	-0.10762	0.0079301	-0.016567	0.0044411	-0.37504	0.001803	-0.22334	-0.31073	0.014376	-0.12265	-0.22318	0.0033299	-0.19739	-0.010181	0.011179	-1.2929	-0.0082045	-0.60899	-0.032278	-0.44997	0.0172	-0.57091	-0.18861	0.085943	-0.0031859	-0.017803	-0.49214	0.20947	-0.053605	0.023312	-0.49715	-0.0033243	-0.0091286	0.021171	-0.068663	0.2861	-0.40252	-0.0049188	-0.43311	-0.0013365	-0.30345	0.0081438	-0.20406	-0.60217	
Deletion Peak 11 - CN values	7q36.1  	chr7:101454617-159138663(probes 718092:748225)  	chr7:151566444-151578991(probes 744772:744773)    	chr7:121246452-159138663(probes 728532:748225)  	0.069072	   0.069072		Actual Copy Change Given	-0.089964	0.0033299	0.021603	0.0024969	-0.015442	0.0098669	-0.0017948	0.36855	0.010982	0.017606	0.053379	-0.15822	0.0041632	0.26718	0.0027745	0.020763	0.00083195	0.018029	-0.71239	0.034536	-0.012225	-0.0021065	0.00013863	0.071822	-0.62751	0.001803	0.00069327	0.64528	0.010021	0.010285	0.0033299	-0.28001	0.0040732	0.018243	0.012546	0.11038	-0.027364	0.025531	0.001199	0.23111	-0.0015243	-0.0026806	-0.014067	0.11701	0.062223	0.010285	0.03576	-0.013235	0.0087528	-0.10276	-0.085085	-0.34274	-0.0011087	0	0.035947	0.00041593	0.11208	-0.80307	0.0083351	0.014254	-0.03771	0.42318	0.0037465	0.019503	0.20457	0	0.0015714	0.11852	-0.23741	0.019783	0.1535	-0.0012473	0.0061665	0.17987	-0.07464	-0.038442	0.024445	0.021043	0.0026357	0.0040243	0.18722	-0.37423	0	-0.021098	0.26137	0.20809	0.12079	0.023847	-0.49684	0	0.32551	-0.0041664	0.023145	0.23337	0.021183	0.38328	0	0.031205	-0.14361	0.0444	0.16971	0	
Deletion Peak 12 - CN values	8p21.3  	chr8:1-29215076(probes 748226:765209)               	chr8:22203435-22978810(probes 760597:760953)        	chr8:5247523-26980586(probes 750777:763743)        	0.09364	    0.09364		Actual Copy Change Given	-0.65165	-0.00013862	0.0095883	0.012795	0.0040243	0.0087528	-0.050014	0.40227	-0.0055375	-0.038929	-0.1294	0.028763	0.020343	-0.16675	0.001803	0.045566	0.0094491	-0.14772	0.020483	-0.0099571	0.00033211	-0.60189	0.0023581	-0.097232	-0.63519	0.0095883	0.00098279	-0.67755	-0.086031	-0.37019	0.0020805	-0.29177	-0.0098165	0.0013868	-0.15682	-0.063032	0.021946	0.037076	0.0015672	-0.43672	0.10848	-0.0006817	0.016065	-0.16001	0.11155	-0.0016629	0	-0.0050931	-0.038306	0.07815	-0.15964	0.17905	-0.12784	-0.0008316	0.0048161	-0.0020784	0	-0.4875	-0.19112	0.021605	-0.024251	-0.3386	-0.00027724	0	-0.69559	-0.31295	0.012701	0.033061	-0.21235	0.036284	0.22281	0	-0.058002	-0.6256	0.03514	0.21161	0.08136	-0.0020784	-0.028672	-0.58314	-0.19737	-0.48848	-0.40052	-0.70818	0.0055529	-0.24655	0.13598	-0.53632	-0.49465	-0.010784	-0.00097017	-0.51826	0.04812	-0.82305	0.014051	0.0015913	-0.011335	0.000604	-0.13858	-0.0092977	0.15249	0.047126	
Deletion Peak 13 - CN values	8q12.1  	chr8:49983539-69264813(probes 774098:785291)      	chr8:58114932-58200501(probes 778734:778777)        	chr8:58109221-58208537(probes 778730:778779)      	0.19522	    0.19282		Actual Copy Change Given	0.60286	-0.00013862	0.0095883	0.012795	0.0040243	0.0087528	-0.01312	0.40227	-0.0055375	-0.069808	-0.1294	0.028763	0.020343	0.15547	0.017544	0.045566	0.0094491	0.19208	0.020483	0.070673	0.00033211	-0.62457	0.0023581	-0.097232	1.0266	0.0095883	0.00098279	0.63119	-0.086031	0.0043021	0.0020805	0.29724	-0.0098165	0.0013868	-0.90707	-0.063032	0.021946	0.037076	0.0015672	0.2125	0.10848	0.035474	0.016065	-0.16001	0.11155	-0.0016629	0	-0.0050931	-0.038306	0.07815	-0.15964	0.17905	-0.035993	-0.0008316	0.0048161	-0.0020784	0	0.14419	-0.19112	0.13378	-0.024251	0	0.006109	0	0.59027	0.0036076	0.00032315	0.033061	0.65148	0.036284	0.22281	0	0.011732	0.43653	0.03514	0.21161	0.08136	-0.0020784	-0.028672	0.58919	0.56881	-0.12017	0.071428	-0.013402	0.015028	-0.24655	0.13135	-0.53632	0.0090312	-0.010784	-0.00097017	0.45666	0.04812	0.27756	0.014051	0.0015913	-0.011335	0.000604	0.17694	-0.0092977	0.16205	0.047126	
Deletion Peak 14 - CN values	9p21.3  	chr9:21865498-21996995(probes 843247:843310)      	chr9:21959052-21977193(probes 843298:843299)        	chr9:7055490-31869950(probes 833448:848905)        	4.3377e-50	 4.3377e-50		Actual Copy Change Given	-0.6464	0.00041593	-0.0079581	-0.0024938	-0.67315	-0.27643	-0.021035	-0.50784	-0.53936	-0.53496	-0.17082	-0.48302	-0.23104	-0.15067	-0.74803	-0.57269	-0.47554	-0.13923	-0.69351	-0.044686	-0.87803	-1.1998	-1.1451	0.057939	-0.62131	-0.33214	0.021744	-0.27689	-0.11755	-0.85599	-0.0008316	-0.88511	-0.010735	-0.0016629	-0.22527	0.0015255	-0.070343	-0.023566	-0.040602	-0.1678	-0.49298	-0.053928	-0.010094	-0.84155	-0.13199	-0.00069303	-0.14648	-0.0064844	-0.72146	-0.16357	-0.66665	-0.34377	-0.076278	-0.45018	-0.36022	-0.92301	-0.10895	-0.79274	-0.16914	-0.10249	-0.060076	-0.33479	-0.36125	-0.13061	-0.33422	-0.64556	-0.0030017	-0.027124	-0.87635	0	-0.62752	-0.043737	-0.067938	-0.3567	-0.030591	-0.63083	-0.020239	-0.44739	-0.031359	-0.87463	-0.0068413	-1.2351	-0.45597	-0.68852	-1.2187	-0.71051	-0.27916	-0.52798	-0.99799	-0.0031859	-0.63462	-0.96653	-0.0033243	0.044555	-1.1109	-0.74747	-0.41959	-0.00078224	-0.63925	-0.039928	-0.051316	-0.42287	
Deletion Peak 15 - CN values	9q22.33 	chr9:101468446-101979393(probes 873608:873962)  	chr9:101864709-101918083(probes 873896:873931)    	chr9:101903956-101907671(probes 873914:873915)  	0.093688	   0.095888		Actual Copy Change Given	0.0066653	0.00041593	-0.0085766	0.0024969	-0.33191	-0.27643	-0.021035	0.08739	0.0095883	0.0075697	0.069525	-0.21032	-0.04211	-0.14862	-0.37324	-0.032996	-0.47554	-0.13923	-0.70199	-0.044686	-0.44033	0.0021789	0.0034687	0.057939	0.05694	-0.0089674	0.021744	0.064537	-0.11755	-0.012162	-0.0008316	-0.28358	-0.010735	-0.0016629	0.0011093	0.0015255	-0.066058	-0.03553	0.00078289	-0.16525	-0.0011087	-0.053928	-0.010094	-0.049019	-0.13199	-0.00069303	-0.14648	-0.0020487	-0.082801	-0.16357	-0.14497	-0.34377	-0.076278	-0.00027724	0.00097064	0.0059347	-0.10895	0.29427	0.013772	-0.10249	-0.060076	0.0020805	-0.0049844	0.011261	-0.039122	0.0010391	-0.0030017	-0.027124	0.058935	0	-0.2227	-0.043737	0.0085319	0.091402	-0.030591	0.12564	-0.020239	-0.0013858	-0.027513	-0.016704	-0.0068413	-0.43583	0.0090312	0.013246	-0.44027	-0.15413	-0.2818	-0.089831	-0.010094	-0.0031859	-0.32275	-0.01052	-0.0033243	0.044555	-0.29154	-0.008235	-0.00069303	-0.00078224	0.18692	0.04176	-0.051316	-0.42287	
Deletion Peak 16 - CN values	10q23.2 	chr10:86084854-125854327(probes 947999:973492)  	chr10:88018950-88030549(probes 949388:949389)      	chr10:87542271-88109286(probes 949025:949444)    	0.12526	    0.12725		Actual Copy Change Given	0.0068289	0.0077783	0.027076	0.0032255	-0.00048465	0.003076	0.0034753	-0.46717	-0.042788	0.012204	0.065799	0.026514	0.19923	-0.14631	-0.027945	0.19482	-0.47247	-0.065581	-0.6332	-0.0067813	-0.0373	0.017144	0.0079175	0.043128	-0.28727	0.00041593	0.71038	-0.33685	-0.17148	-0.0033243	0.0020805	0.007653	-0.0045208	-0.00013862	0.011425	0.012237	-0.067934	-0.0049844	0.0010603	-0.17338	0.0017725	0.0013443	-0.004556	0.031155	0.025952	0	-0.064125	-0.00080193	0.0052749	-0.09578	0.0022807	-0.33987	0.0033299	-0.11011	-0.35293	-0.034223	-0.03579	-0.21387	0.010842	-0.064228	0	-0.022606	-0.36045	-0.11835	0.18193	-1.1879	-0.068752	0.055658	-0.16886	-0.018353	-0.21171	-0.0063668	0.0067228	0.052668	0.073299	0.18859	0.0072585	0.39861	0	0.021183	0.13984	0.17513	-0.0024938	-0.01106	0.087943	0.12889	0.030591	0.026373	0.00041593	0.0019863	0.0012481	0.004985	-0.065447	-0.33959	-0.044822	-0.0020127	0.0062481	0.0050464	-0.12694	0.05167	-0.0091286	-0.0013858	
Deletion Peak 17 - CN values	11p15.4 	chr11:1-9473769(probes 978766:983540)               	chr11:4563048-4569024(probes 980372:980375)          	chr11:1-8086986(probes 978766:982710)               	0.055747	   0.060915		Actual Copy Change Given	0.03369	0	0.0012481	-0.0008316	-0.0042469	-0.25745	0.0016708	-0.48039	0.0068044	0.012159	-0.046177	0.033549	-0.14772	-0.056173	-0.0029091	-0.079609	-0.48649	0.019363	0.015587	-0.01037	0.0064421	-0.0001668	0.0047629	-0.017391	0	-0.00041585	-0.36703	0.032448	-0.26479	0.010982	0.0015255	0.00027728	-0.0025835	-0.0008316	0	-0.043059	0.01174	0.018943	0.0010603	0.050222	-0.00097017	0.0018933	-0.015466	0	-0.099341	0.001803	0.029842	0.00090292	-0.016919	-0.28311	-0.046929	0.043865	-0.00041585	0.0015255	0.0040243	0.0026357	-0.11083	0.06227	0.21978	0.099301	-0.0041546	-0.13329	-0.012989	-0.1526	-0.25624	-0.30968	0.0036536	-0.10156	0.062363	-0.053611	0.15909	-0.01354	-0.01362	-0.3668	-0.0064659	0.19542	-0.050335	0	-0.0037395	0.010006	0.2442	0.11125	0.044574	-0.018216	-0.3424	0.079895	-1.0458	0.015727	0.0022193	0.0037465	0.00069327	-0.50609	0.008892	0.56345	0.0094491	-0.0020127	0.0038854	0.00018803	-0.13497	0.0046876	-0.0098185	-0.018353	
Deletion Peak 18 - CN values	12p12.3 	chr12:3185141-22798169(probes 1057013:1068675)    	chr12:15474824-15811655(probes 1064282:1064437)    	chr12:7853480-22548548(probes 1060170:1068563)    	0.086974	   0.086974		Actual Copy Change Given	-0.62884	-0.0018014	0.0030522	-0.0075624	0.012655	0.0038854	0.0056985	0.0098669	0.016705	0	0.08161	-0.21602	-0.18055	-0.045672	-0.0027707	0.0016642	0.48975	-0.036538	-0.021784	-0.014778	-0.0054828	0.47543	-0.58559	0.069239	-0.029584	0.0036076	-0.76355	-0.65843	0.038928	-0.35938	-0.00069552	0.18283	-0.0036908	-0.00027724	0.0040243	-0.010232	-0.033208	0.041175	-0.0098673	0.22342	-0.00069303	0.0011996	-0.0089906	-0.10026	-0.0073912	-0.0010127	0.029561	0.018833	-0.37144	-0.39328	-0.097173	0.1431	-0.0037395	-0.049695	-0.0032915	0.0087528	-0.03402	0.26818	0.036794	0.016158	0.0091705	0.011577	0.0068044	-0.069332	-0.23545	0.0058309	-0.003417	-0.048342	0.13613	-0.035721	-0.19989	-0.015329	0.007001	0.52686	0.053846	-0.60502	-0.0014878	0.013074	-0.029448	-0.54653	0.1348	0.89629	0.018243	0.014749	-0.45219	0.090285	-0.060211	0.037641	-0.0045695	0.0016642	-0.0015243	0.019631	-0.070135	0.057635	0.0026357	0.012024	0.0051359	-0.0024444	0.031014	-0.0026634	-0.0013858	0.044563	
Deletion Peak 19 - CN values	12q12   	chr12:31809739-55796833(probes 1074557:1084579)  	chr12:40148348-40501364(probes 1076052:1076314)    	chr12:40323642-40324141(probes 1076184:1076185)  	0.12725	    0.20975		Actual Copy Change Given	-0.034359	-0.0018014	0.00013863	-0.0019399	0.012655	0.0038854	0.0056985	-0.92152	0.016705	0	0.08161	-0.090361	0.24342	-0.056442	-0.0027707	0.0016642	-0.46897	-0.036538	-0.66938	0.0051359	-0.0054828	0.44525	-0.0045695	0.069239	-0.029584	0.0036076	-0.76355	0.17998	0.038928	0.021463	-0.00069552	0.19573	-0.0036908	-0.00027724	0.0040243	-0.010232	-0.033208	0.041175	-0.0098673	0.22342	-0.00069303	0.0011996	-0.0089906	-0.29827	-0.0073912	-0.0010127	0.029561	0.018833	1.968	0	0.056563	0.50168	-0.0037395	-0.049695	-0.0032915	-0.0022168	-0.03402	0.26818	0.036794	0.016158	0.0091705	0.015587	-0.35681	-0.069332	-0.22911	-0.30862	-0.003417	-0.048342	-0.198	-0.035721	-0.19989	-0.015329	0.007001	0.41982	0.053846	0.068378	-0.07245	0.013074	-0.029448	0.023847	0.1348	0.92817	0.018243	0.010564	-0.45219	0.090285	-0.060211	0.037641	-0.0045695	0.0016642	-0.0015243	0.0045152	-0.070135	0.057635	0.0026357	0.012024	0.0051359	-0.0024444	0.031014	-0.0026634	-0.0013858	0.044563	
Deletion Peak 20 - CN values	12q24.33	chr12:75782484-133851895(probes 1096492:1130026)	chr12:131436970-131626305(probes 1129384:1129519)	chr12:78511889-133851895(probes 1098387:1130026)	0.059788	   0.072021		Actual Copy Change Given	0.015447	-0.0018014	-0.0017159	-0.0019399	-0.0085766	0.0038854	0.0056985	-0.075614	0.016705	0.012856	-0.11581	-0.090361	-0.20958	-0.078378	-0.0026767	0.0016642	-0.48744	-0.093129	-0.69595	0.00098233	0.0026906	-0.073503	-0.0045695	0.063795	-0.029584	0.0036076	-0.76355	-0.33791	-0.011459	-0.0023553	-0.00069552	-0.27965	-0.0036908	-0.00027724	0.0040243	-0.116	-0.033208	-0.0071958	-0.0098673	0.28102	-0.00069303	0.0011996	-0.015779	0.10118	-0.0073912	-0.00055444	0.0098368	0.018833	-0.39074	0	0.11894	-0.33144	-0.0037395	-0.049695	0.0012481	-0.0022168	-0.035382	0.2547	0.036794	0.015739	0.0091705	-0.32957	0.0069435	-0.14761	-0.22207	-0.30862	0.0033758	-0.048342	-0.198	-0.035721	-0.19989	-0.015329	0.007001	-0.14926	-0.09482	0.013772	-0.07245	-0.46844	-0.0092942	0.023847	0.1348	-0.15988	-0.34939	0.0023581	-0.51607	-0.27628	-0.082137	0.029629	-0.0045695	0.0016642	0.0029133	0.0045152	-0.070135	0.057635	0.0026357	0.012024	-0.0012473	-0.0024444	0.022929	-0.0026634	-0.025976	0.045991	
Deletion Peak 21 - CN values	15q15.1 	chr15:1-89748703(probes 1236171:1273345)         	chr15:40328974-41586765(probes 1244490:1245064)    	chr15:40350132-40351716(probes 1244499:1244500)  	0.19778	    0.19282		Actual Copy Change Given	0.089272	-0.0015781	-0.0029309	0.003191	0.029606	0.0011093	-0.0011022	-0.46483	0.017544	0.013694	-0.12434	0.040609	-0.076278	-0.15349	0.0022193	-0.022332	0.022964	-0.031496	0.013353	-0.015466	-0.040698	-0.53482	0.0095883	0.15188	-0.27655	-0.0056757	-0.76757	-0.66927	-0.25575	0	0.00055459	-0.29272	0.0093588	-0.0013858	-0.0040162	-0.093535	-0.06326	-0.010497	-0.06932	-0.39377	0	0.0060604	0.0041712	-0.024114	-0.068261	0.0015255	0.021978	-0.0021872	0	0.078727	-0.1002	0.044999	-0.0098185	0.0055529	0.0095883	-0.30874	0.033646	0.048025	-0.040247	-0.092333	-0.0076101	0.016845	-0.3659	-0.0019399	0.18283	-0.0040162	0.0025428	0.10023	-0.21528	-0.035176	-0.18309	0.0054139	0.0109	-0.10736	0.078479	-0.17322	-0.0020418	0	-0.053905	0.010588	0.003191	-0.60458	-0.35863	0.0077783	-0.11796	-0.01289	-0.2775	0.094698	-0.0042929	-0.0008316	0.033408	0.36246	0	-0.68789	-0.041702	-0.0074065	-0.020878	-0.0024444	-0.1313	0.045392	-0.014366	0.035524	
Deletion Peak 22 - CN values	16q23.1 	chr16:78129058-79627770(probes 1313946:1315311)  	chr16:78129058-79247026(probes 1313946:1314959)    	chr16:78583258-78586506(probes 1314453:1314454)  	0.15925	      0.159		Actual Copy Change Given	0.032563	0.0037465	0.014749	-0.00041585	0	0.0032963	-0.0035004	0.37397	-0.078943	0.021975	-0.13351	0.030985	0.012775	-0.0071958	0.0016642	-0.12724	0.019363	0.026813	-0.007472	-0.072942	0.02202	0.019054	-0.57664	0.055347	0.04812	-0.01354	-0.37245	-0.30684	-0.27594	-0.0034627	0.0026357	-0.012989	0.0050458	0.0013868	0.046275	0.015308	0.020825	-0.0026322	0.071794	0.4534	-0.0016629	0.00092217	-0.017116	0.18162	-0.069688	0.0030522	0.023801	-0.0024641	-0.00055444	0.024268	0.21613	0.13569	0.068522	-0.0017822	0.020203	0.014749	0.084713	0.055563	0.00083195	-0.055756	0.07254	0.012516	-0.0029091	0.0072217	0.1631	0.076279	0.0021264	-0.0048192	0.33593	0.00013863	0.092146	-0.00055444	0.0078359	0.19041	0.013392	0.161	0.0043388	-0.017941	0.015727	0.032281	0.00013863	0.12108	0.10691	0.024969	0.22792	0.033323	0.13979	0.004719	-0.012438	0.0023581	0.0098669	-0.016028	0.0077783	-0.059152	-0.03286	-0.0053337	0.0029133	-0.0011266	-0.12733	0.042134	0.17452	0.027919	
Deletion Peak 23 - CN values	17q22   	chr17:50947516-60147907(probes 1342667:1347958)  	chr17:56426873-56498380(probes 1346249:1346284)    	chr17:49762297-81195210(probes 1341811:1358537)  	0.0021697	  0.0021697		Actual Copy Change Given	-0.60719	0.00055459	0.0023581	0.00083195	0.021744	-0.010922	-0.029714	-0.52849	-0.063166	0.026857	0.010285	-0.13523	-0.1827	-0.038986	-0.0012473	0.013772	0.018613	-0.072274	-0.0087146	-0.034631	0.0017191	-0.54967	0.0076392	-0.044551	0.047126	-0.0062286	0.036617	-0.31059	0.30792	-0.38156	-0.0024938	-0.29638	-0.0042442	-0.0038779	-0.077345	-0.011473	0.0095106	-0.020824	-0.019088	-0.39988	0.0012481	-0.0050328	0.00597	-0.16103	-0.073209	-0.00055444	-0.036718	0.0015552	-0.016781	-0.27212	0.21214	-0.32007	-0.053611	-0.051222	-0.00041585	-0.56873	0.0082639	-0.21226	-0.046989	0.011413	0.0086135	-0.31412	-0.011473	-0.039258	-0.24812	-0.31412	-0.1335	0.026373	-0.011751	-0.031223	0.16308	-0.0027707	-0.03253	-0.36249	0.018842	-0.6146	0	0.0098669	-0.030131	-0.53906	-0.018585	0.06208	0.11257	-0.67903	-0.37504	0.18192	0.10935	-0.55517	-0.0083005	-0.0087146	0.03031	-0.0087264	-0.021921	-0.080026	-0.37369	-0.080877	-0.42386	-0.0018905	-0.17272	-0.033844	-0.042652	-0.60622	
Deletion Peak 24 - CN values	18p11.32	chr18:1-5751574(probes 1358538:1361391)             	chr18:1-330689(probes 1358538:1358538)                 	chr18:1-1612988(probes 1358538:1359028)             	0.11506	    0.11528		Actual Copy Change Given	0.026935	-0.096968	-0.03504	-0.017116	-0.34366	-0.199	-0.0087081	-0.48218	-0.26997	-0.54346	-0.12772	-0.067458	-0.093006	0.43716	-0.010922	-0.0019399	-0.46664	-0.0081624	0.030732	-0.17322	1.25	-0.43552	-0.00069303	-0.12486	-0.5793	-0.37617	-0.78429	0.8931	-0.30426	0.33707	0.00069327	-0.0088526	-0.01803	-0.0030475	0.19269	-0.10644	-0.12363	-0.024524	-0.029633	-0.050127	-0.15528	-0.017989	-0.056442	0.24684	-0.12421	0.0063871	-0.17276	-0.0068899	0.021043	-0.19487	-0.40446	0.46519	-0.15119	-0.18395	-0.029327	0.0030522	-0.011268	-0.079964	-0.08094	-0.29897	-0.019863	-0.01037	-0.0077482	-0.1431	-0.25031	0.0026357	-0.058417	-0.19124	-0.19437	-0.061286	0.12518	-0.0076101	-0.047068	0.51037	-0.11544	0.20366	-0.13118	-0.45522	-0.024798	-0.59341	-0.031905	-0.43279	-0.35236	0.024548	0.088258	0.060794	-0.26415	-0.57465	1.0028	-0.021098	-0.0047079	0.022713	-0.036265	1.0436	0.0019696	-0.02213	-0.42648	-0.0082513	-0.19187	-0.076042	-0.02603	0.015767	
Deletion Peak 25 - CN values	18q21.2 	chr18:48514396-48920689(probes 1385139:1385466)  	chr18:48552482-48616860(probes 1385161:1385286)    	chr18:40858767-67408207(probes 1380147:1396605)  	3.2095e-13	 3.2095e-13		Actual Copy Change Given	-1.1368	-0.096968	-0.03504	-0.032725	-0.62817	-0.199	-0.0087081	-0.51965	-0.26997	-0.55202	-0.12551	-0.10656	-0.41432	-0.24545	-0.013206	-0.29508	-0.46664	-0.26564	-0.69486	-0.17322	-0.69039	-0.60121	-0.59087	-0.12486	-0.96409	-0.73985	-0.766	-0.29896	-0.29365	-0.34067	0.00069327	-0.0088526	-0.01803	-0.0030475	-0.23006	-0.10644	-0.12999	-0.024524	-0.05052	-0.42399	-0.15528	-0.017989	-0.056442	-0.29933	-0.12421	0.0063871	-0.17276	-0.0068899	-0.37437	-0.26412	-0.4776	-0.36424	-0.15119	-0.18395	-0.36703	-0.57763	-0.011268	-0.079964	-0.17319	-0.30744	-0.019863	-0.3519	-0.37358	-0.16001	-0.68788	-0.64987	-0.058417	-0.19124	-0.19437	-0.12317	-0.41873	-0.039234	-0.11674	-0.64057	-0.10994	-0.64377	-0.13118	-0.45522	-0.024798	-0.58696	-0.20299	-0.40221	-0.34985	-1.201	-0.5163	0.060794	-0.68424	-0.96789	-0.4935	-0.021098	-0.0087146	-0.50661	-0.13609	-0.35481	-0.0060904	-0.02213	-0.43268	-0.0082513	-0.36725	-0.076042	-0.21509	0.10921	
Deletion Peak 26 - CN values	19p13.3 	chr19:1-59128983(probes 1401220:1425180)           	chr19:2094593-2284010(probes 1401556:1401608)        	chr19:2123040-2299388(probes 1401562:1401610)      	0.22406	    0.23145		Actual Copy Change Given	-0.56962	0.0019418	0.016006	-0.0053687	0.017404	-0.013953	0.00081925	0.27947	0	0.02433	0.01419	0.045282	0.043015	0.080168	-0.0016629	0.0072217	-0.43279	-0.033132	-0.67985	0.041741	-0.024031	-0.024826	0.00597	0.10002	-0.29579	-0.042788	0.026092	-0.019976	-0.052382	0.00055459	-0.0037395	-0.29378	0.0096374	0.0065262	-0.012438	0.0077783	-0.018609	-0.0030475	0.00086736	-0.10055	-0.046448	-0.021275	-0.029994	-0.26468	0.037641	-0.0048461	0.021838	-0.0016332	0.0034295	-0.2991	0.047473	-0.34446	-0.0037395	-0.0049844	0.0011093	0.019363	0.046486	-0.17723	0.039902	0.028494	0.01433	0.034536	-0.0077482	-0.1259	0.11829	-0.0094046	-0.0032786	0	0.059506	-0.021647	-0.042267	0.0084743	-0.0013285	0.10687	0.072368	0.091558	0.00072987	-0.43745	0.015587	-0.49996	-0.1499	-0.136	-0.038578	-0.62035	-0.51702	-0.044551	-0.028816	-0.045499	0.0015255	0.0037465	0.015168	-0.025221	-0.014916	-0.3991	0.021043	0.0088188	-0.41113	0.002324	-0.28776	-0.0051539	0.17196	0.039054	
Deletion Peak 27 - CN values	19q13.41	chr19:41395276-59128983(probes 1418087:1425180)  	chr19:48312828-55552707(probes 1420883:1423506)    	chr19:46911183-50976533(probes 1420313:1421860)  	0.098163	    0.09626		Actual Copy Change Given	0.10045	0.0019418	0.016006	0.0024969	0.012516	-0.013953	-0.0017243	0.27947	0	0.02433	-0.1329	0.039546	-0.20685	0.080168	-0.00097017	0.0072217	0.026654	-0.033132	0.59116	0.041741	-0.014036	0.53903	0.00069327	-0.04048	0.34518	0.32914	0.023016	-0.019976	0.18239	0.00055459	-0.00013862	0.72886	0.0096374	0.0065262	-0.012438	0.0077783	0.13176	-0.0030475	0.01442	-0.10055	-0.005814	-0.0082107	0.014609	0.097833	0.037641	-0.0048461	0.021838	-0.0016332	-0.38078	-0.2862	0.047473	0.060794	-0.0037395	-0.0049844	-0.0066432	0.019363	0.046486	-0.19233	0.039902	0.028494	0.01433	-0.29189	-0.029448	-0.1259	0.52133	-0.0094046	-0.0032786	0	0.059506	0.21223	-0.034381	-0.00024251	-0.0013285	0.10687	0.085551	0.10877	0.00072987	-0.43301	0.015587	0.035524	0.2523	-0.136	-0.029175	0.12564	0.22191	-0.044551	-0.023155	-0.045499	-0.0081624	0.0037465	0.015168	-0.025221	-0.014916	0.54063	0.021043	0.0088188	-0.37144	0.002324	0.18889	-0.0051539	0.16219	0.063223	
Deletion Peak 28 - CN values	21q21.1 	chr21:1-31585156(probes 1462480:1472896)         	chr21:18805939-18986726(probes 1464551:1464665)    	chr21:1-25744823(probes 1462480:1468788)         	0.073658	   0.074941		Actual Copy Change Given	0.00013863	-0.014366	-0.0098185	-0.0047079	0.00597	-0.0031859	0.0018096	-0.52624	-0.0027707	-0.1588	0.061937	-0.083465	-0.39352	-0.14831	-0.018478	-0.0037395	-0.47617	-0.13175	-0.69974	-0.098945	-0.21758	-0.0034909	0.0033299	-0.11404	-0.61153	-0.018143	-0.77481	0.01673	-0.27797	-0.27428	-0.0048461	-0.59526	0.0050458	-0.0016629	0.22468	0.099142	0.0058923	-0.03245	-0.070048	-0.19927	-0.0045695	-0.0053093	-0.0071958	-0.28703	-0.10053	-0.0027707	0.017638	0.0033596	0.0079175	-0.20759	-0.10402	-0.15809	-0.0041546	-0.10933	0.0073609	-0.3432	-0.065918	-0.45251	-0.086916	-0.10577	-0.1316	0.0083351	-0.0070576	-0.14926	-0.32403	-0.30451	-0.0061829	-0.011198	-0.024116	0.026514	-0.031518	-0.0037395	-0.0086575	0.0097276	0.069279	-0.60593	-0.070367	-0.44764	0.013772	-1.1142	-0.18509	-0.63991	0.0041632	-0.047666	-0.59146	-0.025209	-0.47839	-0.54128	-0.0026322	-0.0067813	-0.0055375	0.018511	-0.019726	0	-0.016429	-0.0056102	-0.41333	-0.0021675	-0.29284	-0.040472	-0.19575	-0.15055	
Deletion Peak 29 - CN values	22q13.31	chr22:43805179-51304566(probes 1495960:1500006)  	chr22:46300770-46512954(probes 1497797:1497852)    	chr22:42776969-51304566(probes 1495451:1500006)  	0.0071172	  0.0069079		Actual Copy Change Given	-0.6215	-0.0063668	-0.0059522	-0.0030274	-0.080275	-0.25019	-0.010364	0.3361	0.015866	-0.24175	-0.14194	-0.17436	-0.22355	0.14013	0.0012481	-0.076812	-0.45672	0.034387	-0.015191	-0.077878	0.0010255	0.012069	0.016006	-0.10618	0.047694	-0.39386	0.042166	0	0.012391	-0.35829	-0.006505	0.20167	-0.0035524	-0.0015243	-0.032041	-0.052126	-0.047335	-0.037762	-0.0015733	-0.40989	-0.015466	-0.071118	-0.010646	-0.51579	-0.033814	-0.0008316	-0.0095874	-0.0063372	-0.0042929	-0.24057	-0.1145	-0.2217	0.00597	-0.10985	0.019783	-0.5795	-0.034973	-0.55082	-0.020992	-0.096428	0.001803	0.037782	-0.39118	-0.01849	-0.26709	-0.0047403	-9.2765e-05	-0.014228	0.040183	-0.13055	0.15664	0.0011093	-0.032803	-0.36635	0.0074003	-0.60894	0.0094858	-0.010922	-0.0038779	-0.55597	-0.37606	-0.27488	-0.34274	-0.66504	0.31638	-0.0021915	-0.07434	-0.15631	-0.49642	-0.0041546	0.33124	-0.51023	-0.010796	-0.044298	-0.60893	-0.0028434	-0.020549	0.0065758	-0.12694	0.054771	-0.1955	-0.60313	
