Unique Name	Descriptor	Wide Peak Limits	Peak Limits	Region Limits	q values	Residual q values after removing segments shared with higher peaks	Broad or Focal	Amplitude Threshold	TCGA-P7-A5NY-01A-12D-A35C-01	TCGA-P8-A5KC-01A-11D-A35C-01	TCGA-P8-A5KD-01A-11D-A35C-01	TCGA-P8-A6RX-01A-11D-A35C-01	TCGA-P8-A6RY-01A-12D-A35C-01	TCGA-PR-A5PG-01A-11D-A35C-01	TCGA-PR-A5PH-01A-11D-A35C-01	TCGA-QR-A6GO-01A-11D-A35C-01	TCGA-QR-A6GR-01A-11D-A35C-01	TCGA-QR-A6GS-01A-11D-A35C-01	TCGA-QR-A6GT-01A-11D-A35C-01	TCGA-QR-A6GU-01A-11D-A35C-01	TCGA-QR-A6GX-01A-11D-A35C-01	TCGA-QR-A6GY-01A-11D-A35C-01	TCGA-QR-A6GZ-01A-11D-A35C-01	TCGA-QR-A6H0-01A-11D-A35C-01	TCGA-QR-A6H1-01A-11D-A35C-01	TCGA-QR-A6H2-01A-11D-A35C-01	TCGA-QR-A6H3-01A-11D-A35C-01	TCGA-QR-A6H5-01A-11D-A35C-01	TCGA-QR-A6H6-01A-11D-A35C-01	TCGA-QR-A700-01A-11D-A35C-01	TCGA-QR-A702-01A-11D-A35C-01	TCGA-QR-A706-01A-11D-A35C-01	TCGA-QR-A70C-01A-21D-A35C-01	TCGA-QR-A70D-01A-11D-A35C-01	TCGA-QR-A70E-01A-11D-A35C-01	TCGA-QR-A70G-01B-11D-A35C-01	TCGA-QR-A70H-01A-12D-A35C-01	TCGA-QR-A70I-01A-11D-A35C-01	TCGA-QR-A70J-01A-11D-A35C-01	TCGA-QR-A70K-01A-12D-A35C-01	TCGA-QR-A70N-01A-12D-A35C-01	TCGA-QR-A70P-01A-11D-A35C-01	TCGA-QR-A70R-01A-11D-A35C-01	TCGA-QR-A70W-01A-12D-A35C-01	TCGA-QR-A70X-01A-11D-A35C-01	TCGA-QR-A7IN-01A-11D-A35C-01	TCGA-QR-A7IP-01A-11D-A35C-01	TCGA-QT-A5XJ-01A-11D-A35C-01	TCGA-QT-A5XK-01A-11D-A35C-01	TCGA-QT-A5XL-01A-11D-A35C-01	TCGA-QT-A5XM-01A-11D-A35C-01	TCGA-QT-A5XN-01A-11D-A35C-01	TCGA-QT-A5XO-01A-11D-A35C-01	TCGA-QT-A5XP-01A-11D-A35C-01	TCGA-QT-A69Q-01A-11D-A35C-01	TCGA-QT-A7U0-01A-11D-A35C-01	TCGA-RM-A68T-01A-11D-A35C-01	TCGA-RM-A68W-01A-11D-A35C-01	TCGA-RT-A6Y9-01A-12D-A35C-01	TCGA-RT-A6YA-01A-12D-A35C-01	TCGA-RT-A6YC-01A-12D-A35C-01	TCGA-RW-A67V-01A-11D-A35C-01	TCGA-RW-A67W-01A-11D-A35C-01	TCGA-RW-A67X-01A-11D-A35C-01	TCGA-RW-A67Y-01A-11D-A35C-01	TCGA-RW-A680-01A-11D-A35C-01	TCGA-RW-A681-01A-11D-A35C-01	TCGA-RW-A685-01A-11D-A35C-01	TCGA-RW-A686-01A-11D-A35C-01	TCGA-RW-A688-01A-11D-A35C-01	TCGA-RW-A689-01A-11D-A35C-01	TCGA-RW-A68A-01A-11D-A35C-01	TCGA-RW-A68B-01A-11D-A35C-01	TCGA-RW-A68C-01A-11D-A35C-01	TCGA-RW-A68D-01A-11D-A35C-01	TCGA-RW-A68F-01A-11D-A35C-01	TCGA-RW-A68G-01A-11D-A35C-01	TCGA-RW-A7CZ-01A-11D-A35C-01	TCGA-RW-A7D0-01A-11D-A35C-01	TCGA-RW-A8AZ-01A-11D-A35C-01	TCGA-RX-A8JQ-01A-11D-A35C-01	TCGA-S7-A7WL-01A-11D-A35H-01	TCGA-S7-A7WM-01A-12D-A35H-01	TCGA-S7-A7WN-01A-12D-A35H-01	TCGA-S7-A7WO-01A-11D-A35H-01	TCGA-S7-A7WP-01A-11D-A35H-01	TCGA-S7-A7WQ-01A-12D-A35H-01	TCGA-S7-A7WR-01A-11D-A35H-01	TCGA-S7-A7WT-01A-12D-A35H-01	TCGA-S7-A7WU-01A-11D-A35H-01	TCGA-S7-A7WV-01A-11D-A35H-01	TCGA-S7-A7WW-01A-11D-A35H-01	TCGA-S7-A7WX-01A-11D-A35H-01	TCGA-S7-A7X0-01A-12D-A35H-01	TCGA-S7-A7X1-01A-11D-A35H-01	TCGA-S7-A7X2-01A-12D-A35H-01	TCGA-SA-A6C2-01A-11D-A35H-01	TCGA-SP-A6QC-01A-11D-A35H-01	TCGA-SP-A6QD-01A-12D-A35H-01	TCGA-SP-A6QF-01A-12D-A35H-01	TCGA-SP-A6QG-01A-12D-A35H-01	TCGA-SP-A6QI-01A-12D-A35H-01	TCGA-SP-A6QJ-01A-11D-A35H-01	TCGA-SP-A6QK-01A-11D-A35H-01	TCGA-SQ-A6I4-01A-11D-A35H-01	TCGA-SQ-A6I6-01A-11D-A35H-01	TCGA-SR-A6MP-01A-11D-A35H-01	TCGA-SR-A6MQ-01A-11D-A35H-01	TCGA-SR-A6MS-01A-11D-A35H-01	TCGA-SR-A6MT-01A-11D-A35H-01	TCGA-SR-A6MU-01A-11D-A35H-01	TCGA-SR-A6MV-01A-11D-A35H-01	TCGA-SR-A6MX-01A-11D-A35H-01	TCGA-SR-A6MY-01A-11D-A35H-01	TCGA-SR-A6MZ-01A-11D-A35H-01	TCGA-SR-A6N0-01A-11D-A35H-01	TCGA-TT-A6YJ-01A-11D-A35H-01	TCGA-TT-A6YK-01A-11D-A35H-01	TCGA-TT-A6YN-01A-12D-A35H-01	TCGA-TT-A6YO-01A-11D-A35H-01	TCGA-TT-A6YP-01A-21D-A35H-01	TCGA-W2-A7H5-01B-11D-A35H-01	TCGA-W2-A7H7-01A-11D-A35H-01	TCGA-W2-A7HA-01B-11D-A35H-01	TCGA-W2-A7HB-01A-11D-A35H-01	TCGA-W2-A7HC-01A-11D-A35H-01	TCGA-W2-A7HD-01A-11D-A35H-01	TCGA-W2-A7HE-01A-11D-A35H-01	TCGA-W2-A7HF-01A-11D-A35H-01	TCGA-W2-A7HH-01A-11D-A35H-01	TCGA-W2-A7UY-01A-11D-A35H-01	TCGA-WB-A80K-01A-11D-A35H-01	TCGA-WB-A80L-01A-11D-A35H-01	TCGA-WB-A80M-01A-11D-A35H-01	TCGA-WB-A80N-01A-11D-A35H-01	TCGA-WB-A80O-01A-11D-A35H-01	TCGA-WB-A80P-01A-11D-A35H-01	TCGA-WB-A80Q-01A-11D-A35H-01	TCGA-WB-A80V-01A-12D-A35H-01	TCGA-WB-A80Y-01A-11D-A35H-01	TCGA-WB-A814-01A-11D-A35H-01	TCGA-WB-A815-01A-11D-A35H-01	TCGA-WB-A816-01A-11D-A35H-01	TCGA-WB-A817-01A-11D-A35H-01	TCGA-WB-A818-01A-11D-A35H-01	TCGA-WB-A819-01A-11D-A35H-01	TCGA-WB-A81A-01A-11D-A35H-01	TCGA-WB-A81D-01A-11D-A35H-01	TCGA-WB-A81E-01A-11D-A35H-01	TCGA-WB-A81F-01A-11D-A35H-01	TCGA-WB-A81G-01A-11D-A35H-01	TCGA-WB-A81H-01A-11D-A35H-01	TCGA-WB-A81I-01A-11D-A35H-01	TCGA-WB-A81J-01A-11D-A35H-01	TCGA-WB-A81K-01A-11D-A35H-01	TCGA-WB-A81M-01A-11D-A35H-01	TCGA-WB-A81N-01A-11D-A35H-01	TCGA-WB-A81P-01A-11D-A35H-01	TCGA-WB-A81Q-01A-11D-A35H-01	TCGA-WB-A81R-01A-11D-A35H-01	TCGA-WB-A81S-01A-11D-A35H-01	TCGA-WB-A81T-01A-11D-A35H-01	TCGA-WB-A81V-01A-11D-A35H-01	TCGA-WB-A81W-01A-11D-A35H-01	TCGA-WB-A820-01A-11D-A35H-01	TCGA-WB-A821-01A-11D-A35H-01	TCGA-WB-A822-01A-11D-A35H-01	TCGA-XG-A823-01A-11D-A35H-01	
Amplification Peak 1	1q21.3  	chr1:120523956-154950221(probes 67825:70227)  	chr1:153493801-153620085(probes 69554:69595)  	chr1:120522602-155356633(probes 67823:70397)  	0.0003485	 0.0003485		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	1	0	1	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	2	0	0	0	0	0	0	0	0	0	0	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	2	1	1	0	0	0	
Amplification Peak 2	4q25    	chr4:55115761-118191881(probes 396581:431953)  	chr4:113600187-113634327(probes 429324:429333)	chr4:113600187-113641646(probes 429324:429336)	0.21293	   0.23432		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 3	4q31.1  	chr4:140946021-141006734(probes 444087:444112)	chr4:140946342-140992630(probes 444088:444107)	chr4:140791103-141036733(probes 443951:444126)	0.001235	  0.001408		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 4	11p15.2 	chr11:12145534-25296454(probes 985549:994647)  	chr11:13164391-13348673(probes 986455:986630)  	chr11:13164391-13352404(probes 986455:986633)  	0.23664	   0.23664		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 5	12q13.3 	chr12:55017371-58374945(probes 1084050:1085758)	chr12:56781426-56791229(probes 1085026:1085026)	chr12:56736878-57176174(probes 1085014:1085202)	0.031228	  0.031228		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	
Amplification Peak 6	14q24.3 	chr14:77411889-77529068(probes 1218564:1218627)	chr14:77423292-77518713(probes 1218569:1218620)	chr14:77413245-77532342(probes 1218565:1218629)	0.056742	  0.056742		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	
Amplification Peak 7	17q21.31	chr17:42282074-42389627(probes 1338852:1338891)	chr17:42287520-42388907(probes 1338854:1338890)	chr17:42286038-42423664(probes 1338853:1338902)	0.0069658	 0.0069658		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	1	0	0	0	0	
Deletion Peak  1	1p12    	chr1:117751737-118152240(probes 66219:66429)    	chr1:117906699-118069436(probes 66313:66386)    	chr1:1-149884926(probes 1:67828)                	7.4452e-20	 7.4452e-20		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	1	1	0	1	0	1	1	1	1	0	1	0	0	0	1	1	1	0	1	1	1	0	0	1	1	0	1	0	1	1	0	1	1	1	0	1	1	1	1	1	1	0	1	1	1	0	1	0	0	1	0	1	1	0	1	1	1	1	0	1	1	1	1	0	1	0	0	0	1	1	1	1	1	1	0	0	1	1	1	0	0	0	1	1	1	1	0	1	1	1	1	1	1	1	1	0	1	1	1	1	1	1	1	1	1	0	1	1	1	0	0	1	1	1	1	1	1	0	1	0	1	1	0	1	1	1	1	0	1	0	0	0	1	0	1	1	0	1	1	1	1	1	0	0	1	1	0	1	0	1	1	1	1	1	1	1	1	0	
Deletion Peak  2	1q44    	chr1:215791352-249250621(probes 108766:129192)  	chr1:243042268-245031806(probes 127018:127976)  	chr1:242717169-245186733(probes 126774:128058)	0.10475	    0.10508		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	
Deletion Peak  3	2q34    	chr2:1-243199373(probes 129193:260550)             	chr2:212238542-213412425(probes 242158:242873)  	chr2:212812791-212815800(probes 242516:242517)	0.25493	    0.25493		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	
Deletion Peak  4	3p24.1  	chr3:27762089-28433157(probes 275441:275909)      	chr3:28372415-28393386(probes 275894:275895)      	chr3:28358261-28398245(probes 275885:275897)    	6.0163e-07	  6.407e-07		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	1	0	0	0	0	0	0	1	1	0	1	1	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	1	0	1	1	1	0	0	1	1	1	1	1	0	1	0	0	0	0	0	0	1	1	0	0	0	1	1	1	0	0	0	0	1	1	0	1	1	0	0	1	0	0	0	1	1	0	0	1	1	1	1	0	0	0	0	1	1	0	0	0	1	0	1	0	0	0	0	1	0	0	0	1	1	1	0	0	0	0	0	1	0	0	1	1	1	1	0	0	0	0	1	0	1	0	0	0	0	0	1	0	1	1	1	1	0	0	0	1	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	1	
Deletion Peak  5	3q26.1  	chr3:161217822-163894013(probes 348829:349973)  	chr3:162886387-163028655(probes 349489:349538)  	chr3:162951757-162968668(probes 349514:349515)	2.0735e-06	 2.0735e-06		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	1	0	0	0	1	0	0	1	1	0	0	1	1	1	0	0	1	1	1	1	0	0	1	0	0	0	0	1	0	1	0	1	1	0	1	1	1	1	0	1	1	1	1	0	0	0	0	1	1	0	0	1	1	1	1	0	1	0	1	1	1	1	1	0	0	0	1	1	0	0	1	0	0	0	1	1	1	0	0	0	0	1	1	1	1	0	0	1	1	1	1	1	1	1	1	1	1	0	1	1	1	1	1	1	0	1	1	1	0	1	1	1	1	1	1	1	0	1	0	1	0	0	1	1	0	1	0	1	0	1	0	1	0	1	1	0	0	0	1	1	0	0	0	0	0	0	0	0	1	1	1	0	1	1	1	1	1	
Deletion Peak  6	4q22.1  	chr4:90762789-91050179(probes 416818:416919)      	chr4:90804644-90958045(probes 416843:416872)      	chr4:90823953-90828387(probes 416858:416859)    	0.0035492	  0.0035799		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	
Deletion Peak  7	4q35.2  	chr4:169747574-191154276(probes 460127:469753)  	chr4:187185386-187216387(probes 468847:468880)  	chr4:175147971-191154276(probes 463013:469753)	0.0034221	   0.003186		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	
Deletion Peak  8	5q15    	chr5:79949348-113842067(probes 512497:530297)    	chr5:93948876-94036005(probes 519756:519793)      	chr5:93991320-93995588(probes 519775:519776)    	0.010326	   0.009912		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	1	0	0	0	0	
Deletion Peak  9	6p12.3  	chr6:49915604-49978544(probes 599664:599697)      	chr6:49934736-49938340(probes 599675:599676)      	chr6:49924408-49949110(probes 599669:599680)    	0.00080576	 0.00081059		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	
Deletion Peak 10	6q16.1  	chr6:92231219-94419827(probes 620955:622361)      	chr6:93944741-94130625(probes 622057:622181)      	chr6:94029783-94043047(probes 622110:622123)    	0.0065852	   0.006558		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	1	0	0	1	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	1	
Deletion Peak 11	7q33    	chr7:57244042-159138663(probes 700225:748188)    	chr7:136579757-136853013(probes 737052:737250)  	chr7:136710123-136712154(probes 737152:737153)	0.21002	    0.20428		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	
Deletion Peak 12	8p22    	chr8:14710032-16024383(probes 754950:755876)      	chr8:15393394-15624424(probes 755445:755589)      	chr8:15545745-15550198(probes 755518:755519)    	0.02387	    0.02393		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	1	0	1	0	0	1	0	0	0	
Deletion Peak 13	9p24.2  	chr9:2842384-3826080(probes 831172:831776)          	chr9:3246492-3530634(probes 831507:831641)          	chr9:3341588-3342397(probes 831575:831576)        	0.00078878	 0.00077675		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	0	1	0	0	0	
Deletion Peak 14	9q21.12 	chr9:73027614-74298719(probes 854607:855588)      	chr9:73396880-73489041(probes 854883:854967)      	chr9:73435029-73436669(probes 854926:854927)    	0.040575	   0.039541		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	
Deletion Peak 15	11p15.4 	chr11:1-11293017(probes 978729:984791)             	chr11:7038591-7096811(probes 981924:981962)        	chr11:1-12149530(probes 978729:985552)           	0.00054378	 0.00051791		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	1	1	0	0	0	0	0	0	1	0	0	1	0	0	1	0	1	1	0	1	1	0	0	0	0	0	0	1	1	1	0	1	0	0	1	1	0	0	1	0	1	0	0	0	1	1	1	0	1	0	0	0	1	0	0	1	0	0	0	0	1	0	1	1	1	0	1	0	0	0	0	0	0	0	1	1	0	1	1	0	1	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	1	0	1	0	0	1	1	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	1	0	1	1	0	1	1	1	
Deletion Peak 16	11q22.1 	chr11:96126036-100558999(probes 1030897:1033670)	chr11:99423136-100231244(probes 1032870:1033442)	chr11:99831552-99832533(probes 1033157:1033158)	1.462e-05	  1.462e-05		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	1	1	0	0	0	1	1	0	1	0	0	1	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	1	0	1	0	1	1	0	1	0	0	0	1	0	0	1	0	0	0	1	0	0	1	0	1	0	1	0	1	0	1	0	0	0	1	1	0	0	1	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	1	0	1	0	1	
Deletion Peak 17	12q21.33	chr12:91383361-91498710(probes 1105712:1105768)  	chr12:91442316-91452893(probes 1105733:1105743)  	chr12:91443310-91466444(probes 1105734:1105757)	0.0099067	   0.009912		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	
Deletion Peak 18	13q22.3 	chr13:1-115169878(probes 1129989:1186663)       	chr13:78468161-78504854(probes 1163948:1163969)  	chr13:78470351-78489560(probes 1163951:1163964)	0.25493	    0.25493		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 19	16q21   	chr16:59786558-64981096(probes 1303276:1306502)  	chr16:61684449-62071400(probes 1304370:1304621)  	chr16:61875408-61883530(probes 1304496:1304497)	0.0033927	   0.003186		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	
Deletion Peak 20	17p13.2 	chr17:6344536-6547775(probes 1324065:1324203)      	chr17:6351225-6461687(probes 1324066:1324147)      	chr17:6394498-6510373(probes 1324091:1324172)    	0.031972	   0.030814		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	1	0	0	1	1	0	1	0	1	0	0	1	1	0	0	0	0	1	0	0	0	0	0	0	1	1	0	0	0	1	1	1	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	1	1	0	1	1	0	1	1	1	0	1	0	1	1	0	1	0	0	1	1	0	0	0	1	1	1	0	0	1	1	0	1	1	0	0	1	0	0	0	1	0	0	1	1	1	0	1	0	0	0	0	0	0	1	1	1	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0	1	1	1	0	1	1	0	1	0	0	1	0	0	0	0	0	0	0	0	1	0	1	1	1	1	0	1	1	0	1	0	0	1	0	
Deletion Peak 21	17q11.2 	chr17:29326736-29622105(probes 1332847:1332967)  	chr17:29419706-29555153(probes 1332887:1332942)  	chr17:25276328-42543261(probes 1331144:1338943)	3.2375e-10	 3.2167e-10		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	1	0	0	1	1	1	0	0	1	0	1	1	0	0	1	0	0	0	0	1	0	0	1	1	0	0	0	1	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	1	1	1	0	1	0	1	0	0	1	1	1	0	1	0	0	0	1	0	0	0	
Deletion Peak 22	22q13.31	chr22:47571204-48018269(probes 1498525:1498876)  	chr22:47740203-47770502(probes 1498666:1498685)  	chr22:40851807-51304566(probes 1494362:1499965)	0.00016533	 0.00016533		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	1	1	1	0	0	1	0	1	0	1	0	0	0	0	1	1	0	0	1	1	1	0	0	0	1	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	1	0	0	0	0	1	0	0	1	0	0	0	1	0	0	1	1	0	1	1	1	0	0	0	0	1	1	1	0	0	1	0	0	0	1	0	1	1	1	1	1	1	0	1	0	0	1	1	1	0	0	1	1	0	1	0	0	1	1	1	1	0	0	0	1	0	0	0	0	1	0	1	1	0	1	0	1	1	0	0	1	
Deletion Peak 23	Xp21.1  	chrX:1-155270560(probes 1499966:1563776)          	chrX:30870233-34033668(probes 1512527:1513786)    	chrX:32077610-32079953(probes 1513157:1513158)  	0.22956	    0.23713		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	1	0	0	1	1	0	1	1	1	1	0	0	1	1	0	1	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	1	1	0	0	1	0	1	0	1	0	1	1	1	1	1	0	1	0	1	0	0	1	0	0	0	0	1	0	0	1	0	0	0	1	0	0	1	1	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	
Amplification Peak 1 - CN values	1q21.3  	chr1:120523956-154950221(probes 67825:70227)  	chr1:153493801-153620085(probes 69554:69595)  	chr1:120522602-155356633(probes 67823:70397)  	0.0003485	 0.0003485		Actual Copy Change Given	0.65719	-0.037218	0.022725	0.013911	0.010146	0.025812	0.022444	0.058081	0.013911	-0.0095426	0.5665	0.0037465	0.98428	0.0020805	0	-0.0084385	0.019503	0	-0.49637	-0.0070576	0.013772	-0.47659	0.9019	-0.013402	-0.020138	0.71641	-0.79908	-0.0008316	0.037287	0.0033299	0.01447	0.88611	-0.032529	0.79007	0.42016	0.014749	1.7045	-0.35613	0.013385	-0.02465	0.049114	0.010564	0.080168	0.021463	0.018243	0.027611	-0.45511	-0.0022168	-0.59419	-0.017941	0.0087528	0.079735	0.012237	0.013772	0.010424	0.0041632	0.072971	0.69372	0.59179	0.013492	0.95929	0.013911	0.015587	-0.15195	0.016006	-0.066252	0.023145	0.0016563	-0.018902	-0.0055923	0.018321	0.8485	0.53854	0.77214	0.10979	0.031155	-0.016841	-0.0056757	-0.33814	0.03031	0.006109	0.00041593	-0.005261	0.0016642	0.041458	0.024829	-0.1616	0.070243	-0.049289	0.68217	0.72363	0.037527	0.040326	0.0087108	0.019503	0.012934	0.0077783	0.025952	-0.019177	0.081755	0.88005	-0.11141	0.024268	0.38138	0.032986	0.022865	0.54013	0.0023581	0.030873	-0.035312	0.032986	-0.0056921	-0.0017101	0.0122	-0.10248	0.015308	0.023118	0.020203	0.014284	0.040609	0.01433	-0.0066432	0.021744	0.00083195	1.3596	0.025531	0.053664	-0.00041585	0.10979	0.00055459	0.033408	0.0094491	-0.033504	0.81835	0.0048579	0.0037465	0.033831	0.11303	-0.02978	0.0068044	-0.75235	0.01523	0.65836	0.02511	-0.0031859	0.065656	0.024689	0.010564	0.018103	0.087548	1.1003	0.013492	0.049398	0.023005	0.94049	0.16217	0.72207	-0.32635	0.0055529	0	
Amplification Peak 2 - CN values	4q25    	chr4:55115761-118191881(probes 396581:431953)  	chr4:113600187-113634327(probes 429324:429333)	chr4:113600187-113641646(probes 429324:429336)	0.21293	   0.23432		Actual Copy Change Given	-0.0048461	0.0012481	0.01447	0.015866	-0.015741	-0.0012473	-0.014366	0.00013863	-0.017803	-0.010133	0.016286	-0.0073339	0	-0.0060153	-0.03095	0.0022193	0.00458	0.0015255	-0.00097017	-0.00055444	0.004719	-0.45854	0.0052749	-0.0066432	0.0019418	0.012097	-0.022745	-0.0040162	-0.0038098	-0.007472	-0.050641	-0.0062162	-0.38392	-0.010784	0.013353	0.011539	-0.027431	0.0077783	0	2.6918	0.0073609	-0.016292	0.011261	0.017544	-0.28418	-0.015556	-0.45747	-0.0094046	-0.01354	-0.37392	0.022865	-0.3856	0.0054139	-0.0095426	0.0041632	-0.22724	0.0037465	0.013074	-0.0059522	-0.0075491	-0.011678	0.88146	0	0.027919	0.006109	-0.23153	-0.012569	-0.02042	0.16325	0.0022193	-0.0070576	-0.012259	-0.024661	-0.0035366	0.0090312	0.012934	0.0034687	0.019791	0	0.035806	-0.0060366	-0.00055444	-0.0031688	-0.0091286	-0.010508	-0.013088	0	-0.01106	0.0041632	0.011261	-0.0069465	0.030451	0.028317	0.11521	-0.011473	0.00013863	0.003191	-0.0096806	-0.016429	-0.00069303	-0.012024	-0.038564	-0.010309	-0.020412	0.024127	0.034254	-0.0035709	-0.026988	0.034677	0	-0.0031859	-0.0022763	-0.30102	0.069143	0.037889	-0.0044312	0.014163	0.0084743	0.0014801	0.049114	0.023145	0.00041593	0.01433	0.56614	0	0.010006	0	0.0049969	-0.011473	-0.0022168	0.044149	-0.0008316	0.0011474	-0.017183	0.0058309	0.0019746	-0.048072	0.026949	0.030169	0.00020127	0.0040982	-0.0008316	0.0062481	-0.0060904	-0.0071397	1.7339	0.020286	-0.0044312	-0.018765	0.0052749	-0.029282	0.016845	0.041741	0.0029441	-0.015466	-0.0032923	-0.011749	-0.32809	0	0.015937	
Amplification Peak 3 - CN values	4q31.1  	chr4:140946021-141006734(probes 444087:444112)	chr4:140946342-140992630(probes 444088:444107)	chr4:140791103-141036733(probes 443951:444126)	0.001235	  0.001408		Actual Copy Change Given	-0.0048461	-0.0016629	0.030873	0.015866	-0.015741	-0.0012473	0.72489	0.00013863	-0.017803	-0.010133	0.016286	-0.0073339	0	-0.0060153	-0.03095	0.0022193	0.00458	0.0015255	-0.00097017	-0.00055444	0.004719	-0.45586	0.0052749	0.026092	0.73189	0.012097	-0.022745	-0.0040162	0.85492	-0.007472	-0.050641	-0.0062162	-0.38392	-0.010784	-0.023429	0.011539	-0.014399	0.0077783	0	0.066005	0.0073609	-0.016292	0.011261	0.017544	-0.29508	-0.023027	-0.45747	-0.0094046	-0.01354	-0.03817	0.022865	-0.3856	0.0054139	-0.0095426	0.0041632	-0.22724	0.0037465	0.0059478	-0.0059522	-0.0075491	0.81894	0.88146	0	0.027919	0.006109	-0.23153	-0.012569	-0.02042	0.16325	0.0022193	-0.011312	-0.010232	-0.024661	-0.0035366	0.0090312	0.012934	0.0034687	0.019791	0	0.035806	-0.0060366	-0.00055444	-0.0031688	-0.0091286	-0.010508	-0.013088	0	-0.01106	0.0041632	0.011261	-0.0069465	0.030451	0.022157	0.11521	-0.020063	0.00013863	0.003191	-0.0096806	-0.016429	-0.00069303	-0.012024	-0.038564	-0.010309	-0.0069195	0.024127	0.034254	-0.0035709	-0.026988	0.052678	0	0.94384	-0.00069303	-0.30102	0.11369	0.037889	-0.0044312	0.014163	0.68943	0.0014801	0.049114	0.023145	0.00041593	0.01433	1.9082	0	0.010006	0	0.0049969	-0.011473	0.81103	0.044149	-0.025346	0.0011474	-0.017183	0.0058309	0.0038854	-0.048072	0.026949	0.030169	-0.0037395	0.0040982	-0.0008316	0.0062481	-0.0060904	-0.0071397	-0.89733	0.021183	-0.014397	-0.018765	0	-0.029282	0.016845	0.041741	0.0029441	-0.017402	-0.0032923	-0.011749	-0.32809	0	0.015937	
Amplification Peak 4 - CN values	11p15.2 	chr11:12145534-25296454(probes 985549:994647)  	chr11:13164391-13348673(probes 986455:986630)  	chr11:13164391-13352404(probes 986455:986633)  	0.23664	   0.23664		Actual Copy Change Given	0	-0.010646	0.64451	-0.65696	-0.95818	0.80928	0.015866	-0.038714	0.013772	0.011261	-0.019314	-0.75115	-0.0015243	0.0016642	-0.34561	-0.0015243	0.0032618	-0.30686	0.0054139	-0.51517	-0.71595	0.0026357	-0.8902	-0.51352	0.017824	-0.0094046	-0.0063668	0.024268	0.017613	0.004719	-0.41212	-0.92044	-0.41317	0.0075404	-0.40782	0	0.024655	-0.76723	-0.78089	0.0043626	-0.0023871	-0.54633	0.0038854	-0.013812	-0.068648	0.0028868	0.065513	-0.69794	-0.60799	-0.00069303	-0.026777	-0.38906	-0.0012473	0	-0.0023553	-0.47564	0.0011093	-0.0022168	-0.72479	-0.0020784	0.017336	-0.0073197	0.18904	-0.7476	-0.0022168	-0.53093	2.3091	-0.84002	0.0058309	-0.26961	-0.0033243	0.016146	-0.0048461	-0.018353	0.0020805	0.014888	-0.0012473	-0.60119	-0.70145	0.0012481	-0.0016629	-0.78933	-0.013402	-0.67548	0.00027728	-0.50846	-0.57918	0.012516	-0.0059522	0	-0.82307	0.7283	-0.0052483	-0.021647	0.0076531	0	0.0093098	0.0114	-0.04577	-0.042381	-0.0038779	-0.12562	-0.82147	-0.74551	-0.0080244	-0.0023553	-0.0072942	-0.52563	0.011121	-0.71586	0.62934	-0.010232	-0.57322	-0.16564	-0.7035	0.00037222	-0.010398	0.028763	-0.000877	0.0087528	0	-0.00067885	-0.85496	0.0034687	-0.028081	-0.86524	0.00458	0.59566	-0.0098185	0.015447	0.004719	-0.0056757	-0.59114	0.010914	-0.57842	-0.0026322	-0.036946	-0.0076777	-0.042771	0	-0.0032507	-0.0019399	-0.01482	0.0020805	-0.94597	-0.0059522	-0.74933	-0.91545	0.00458	0.044857	0.033831	-0.0048461	-0.39642	-0.01354	-0.6992	-0.12358	0	-0.39526	-0.56139	-0.58093	
Amplification Peak 5 - CN values	12q13.3 	chr12:55017371-58374945(probes 1084050:1085758)	chr12:56781426-56791229(probes 1085026:1085026)	chr12:56736878-57176174(probes 1085014:1085202)	0.031228	  0.031228		Actual Copy Change Given	0.010006	-0.0023553	-0.0016629	0.0026357	0.0069435	0.012934	0.004719	0.0083351	0.0055529	0	0	0	0.48561	0.017824	0.30138	-0.0026322	0.0041632	0.0088859	0.0028626	0.010285	0.00027728	0.47547	-0.0019399	-0.0091286	-0.0011087	-0.00055444	0.0030522	-0.0040162	0.0039537	0.0015255	0.0032156	-0.0069959	0.34171	0.0062481	0.012237	0.0058309	0.0070493	-0.0020784	0.0068366	0.78262	0.011261	0.015727	-0.066118	0.01881	0.0026357	-0.012051	0.055449	-0.00013862	-0.0081439	0.0027745	-0.015466	0.084065	0.70945	-0.0023337	-0.007472	0.013096	0.0114	0.0038854	0.60919	0.0070826	0.0053468	0.034536	0.003945	0.010703	0.0041632	0.05025	2.2791	0.003526	-0.0055375	0.0013868	0.012237	-0.0014787	0.013911	0.0069435	0.0087528	-0.006505	0.0034687	0	0.012097	0.0054139	0.0048579	0	0.033721	0.0049969	0.011121	0.02511	0.13628	0.017404	0.00027728	0.019503	0.03633	0.013074	0.0084743	0.010703	0.083631	0.0036076	0.00097064	0.024127	0.21653	0.018383	0.00069327	0.87071	0.020203	0.026955	0.018652	0.0098669	0.3743	-0.0085851	0.015727	0.016425	0.039478	-0.0042929	0.0099587	0.42011	0.0044649	0.0035469	0.96099	0.010842	0.93014	0.010842	0.00597	-0.00013862	0.0024969	0.026529	-0.02076	0.018663	0.026152	0	0.089851	0.0011093	0.018943	0.0070826	0.029926	0.003401	0.0041632	0.0043021	0.09039	0.0096021	0.0011093	0.0052338	0.019437	0.011818	0.0076392	0.004719	0.092025	-0.0088526	0.012307	0.008892	0.038065	0.0072217	0.013632	0.0066653	-0.036401	0.019083	0.0024969	0.012073	0.02525	0.40844	-0.0013858	0.019713	
Amplification Peak 6 - CN values	14q24.3 	chr14:77411889-77529068(probes 1218564:1218627)	chr14:77423292-77518713(probes 1218569:1218620)	chr14:77413245-77532342(probes 1218565:1218629)	0.056742	  0.056742		Actual Copy Change Given	-0.022195	0.0068044	0.0036076	-0.092213	0.0066653	0.00069327	-0.69839	-0.31797	0.0114	-0.087568	0.0022193	-0.0094046	-0.018714	0.00083195	-0.35852	0	0.0083351	0.0075	0.0094491	0.0070826	0.0027745	0.93936	0.0053684	-0.0027707	0.010982	0.00597	0.018523	0	-0.82574	0.0053142	0.0019418	0.0050589	0.33755	0.021603	-0.44878	0.0056919	0.012482	-0.0048461	-0.36881	0.86859	0.0090312	0.58722	0.00013863	0.9596	0.66882	-0.61664	-0.44911	-0.0018964	0.0050455	-0.0026322	0.018943	-0.27571	0.0098669	-0.0080584	0.00458	-0.11047	0.011818	0.00458	0.59926	0.0067015	0.013058	-0.0072385	-0.14026	0.023566	-0.00065686	-0.23704	0.010006	0.0087448	-0.0070576	0.0033299	0.022024	0.019362	0.011261	0.0036076	0	0	0.003191	0.00067189	-0.0083005	-0.88395	1.4433	0.000323	-0.12056	0.0054139	0.021603	0	-0.037898	0.020483	-0.025503	-0.030404	-0.008484	0.0020805	0.016985	-0.0019399	0.0075	0.018663	0.0013868	0.01168	0.035695	0.021183	-0.80779	0.78738	0.014749	-0.3511	0	0.0056919	0.0063871	0.0027745	0.0091705	0.040326	0.00597	0.00027728	0	-0.49749	0.0072456	0.014749	-0.029611	0.013772	0.0050903	0.0051359	-0.84723	0.0027745	0.010146	0.00013863	-0.038306	0.0062481	0.0094491	0.0013868	0.0065262	0.0023157	0.003191	0.0091705	0.015625	-0.77069	0.0063871	-0.0054679	0.0062599	0.0037602	-0.036027	0.013632	0.0086876	0.0044411	-0.00058512	0.014749	0.0029057	0.0065262	-0.74455	0.0073609	0.014609	0.0068044	0.041883	0.0012703	-0.33569	0.018523	0.0037465	0.0078931	0.69241	-0.35293	0.0016642	0.018698	
Amplification Peak 7 - CN values	17q21.31	chr17:42282074-42389627(probes 1338852:1338891)	chr17:42287520-42388907(probes 1338854:1338890)	chr17:42286038-42423664(probes 1338853:1338902)	0.0069658	 0.0069658		Actual Copy Change Given	0.034395	0.38833	0.0098669	-0.019452	0.040468	0.056513	1.0319	0.015028	-0.68815	-0.75332	-0.020549	0.026935	-0.027124	0.0015255	-0.014778	-0.0051227	0.030591	0.0075	0.019223	-0.022195	-0.056981	-0.51527	0.0090312	-0.02603	0.77676	-0.099355	0.069669	0.010424	0.85274	0.010916	-0.39864	0.88395	-0.052126	0.074984	0.028903	0.040609	0.038982	0.00083195	0.018415	-0.046795	0.029644	-0.0091286	-0.013953	-0.86279	-0.047936	-0.5981	-0.43148	0.0076392	0.02539	-0.0099565	-0.037218	-0.8793	0.055515	0.033267	-0.6783	-0.24277	-0.92144	-0.0091286	0.53134	-0.59838	0.78129	0.1382	0.030732	-0.016017	0.0054139	-0.4197	0.018103	0.042106	0.020763	-0.0094046	0.026233	0.71603	0.048688	-0.81491	-0.79803	-0.025072	-0.028355	-0.03681	-0.3463	-0.10631	0.011121	-0.0091286	0.039902	-0.0013858	0.074121	0.011818	-0.56067	-0.00013862	0.0036076	0.0084743	0.030637	-0.082535	0.0072217	0.0094491	0.067805	0.038771	0.00097064	-0.83057	-0.65295	0.06494	0.040185	-0.16063	0.029747	0.043299	-0.0091286	-0.0083005	0.033549	0.017124	-0.86066	0.03506	0.032422	0.0052749	-0.045952	-0.028664	-0.021623	0.035947	0.026065	0.037782	0.010239	0.029184	0.05523	0.0019418	-0.84515	1.345	-0.078544	-0.010646	-0.57851	0.024408	0.1241	0.69148	0.0012481	0.03176	-0.03582	0.043088	0.0062481	-0.0029091	-0.78555	-0.026418	-0.083598	0.019083	0.0052986	0.0012481	0.0097276	0.034254	-0.0019399	1.5583	-0.014228	0.021323	0.085076	0.023005	0.36051	-0.00055444	-0.80194	0.051245	0.013632	0.82957	-0.66966	0.080745	0.0081959	-0.030471	
Deletion Peak  1 - CN values	1p12    	chr1:117751737-118152240(probes 66219:66429)    	chr1:117906699-118069436(probes 66313:66386)    	chr1:1-149884926(probes 1:67828)                	7.4452e-20	 7.4452e-20		Actual Copy Change Given	-0.71497	-0.037218	-0.79802	-0.65295	0.010146	-0.81289	0.022444	-0.67811	-0.72579	-0.77998	-0.5794	0.0037465	-0.51618	0.0020805	0	-0.0084385	-0.77116	-0.77795	-0.49637	-0.0070576	-0.71506	-0.48858	-0.88302	-0.0040162	-0.020138	-0.73923	-0.78572	-0.0008316	-0.81839	-0.0030475	-0.40293	-0.92305	-0.032529	-0.79311	-0.65678	-0.86247	1.7045	-0.35613	-0.76884	-0.89577	-0.70393	-0.55837	-0.60041	0.021463	-0.81671	-0.63289	-0.45511	-0.0022168	-0.59419	-0.017941	0.0087528	-0.40285	0.69727	-0.92383	-0.70702	0.0041632	-0.93828	-0.70863	-0.73055	-0.61699	-0.013606	-0.91714	-0.72932	-0.74507	-0.8235	-0.066252	-0.82448	0.0016563	-0.018902	-0.0055923	-0.61201	-0.84762	-0.70073	-0.84947	-0.80517	-0.68806	-0.016841	-0.0056757	-0.33814	-0.88212	-0.73749	0.00041593	-0.005261	0.0016642	-0.79235	-0.2508	-0.1616	-0.7763	-0.049289	-0.66716	-0.10939	-0.69233	-0.82478	-0.80202	-0.81946	-0.64424	-0.56604	0.025952	-0.73503	-0.74857	-0.80181	-0.11141	-0.79978	-0.35578	-0.8163	-0.73004	-0.56714	0.0023581	-0.87798	-0.36929	-0.87852	-0.0056921	-0.0017101	-0.50207	-0.73256	-0.7327	-0.8218	-0.66855	-0.92129	-0.010408	-0.84117	-0.0066432	-0.86612	-0.6434	-0.0081624	-0.85241	-0.76303	-0.65043	-0.79605	0.00055459	-0.85106	0.0094491	-0.033504	0.002568	-0.57565	0.0037465	-0.78808	-0.65779	-0.02978	-0.75909	-0.75235	-0.80211	-0.64612	-0.46655	-0.0031859	-0.036251	-0.7456	-0.91123	0.018103	-0.7675	0.038771	-0.89181	-1.2929	-0.6591	-0.70792	-0.81352	-0.68915	-0.32635	-0.54673	0	
Deletion Peak  2 - CN values	1q44    	chr1:215791352-249250621(probes 108766:129192)  	chr1:243042268-245031806(probes 127018:127976)  	chr1:242717169-245186733(probes 126774:128058)	0.10475	    0.10508		Actual Copy Change Given	0.65553	-0.037218	0.022725	0.0049969	0.0063838	0.028622	0.022444	0.058081	0.00069327	-0.0095426	0.5665	0.0037465	0.99198	0.0020805	0	-0.0084385	0.0033299	0	-0.50836	-0.0021513	0.013772	-0.47955	0.0043021	0.0068044	-0.020138	0.71587	-0.79908	-0.0008316	0.037287	-0.0053973	0.01447	0.88175	-0.043088	0.76701	0.37924	0.014749	-0.55989	-0.36646	0.013385	-0.0076431	0.01447	0.016985	0.080168	0.021463	0.017124	0.027611	-0.46409	-0.0022168	-0.61951	-0.017941	0.0087528	0.079735	0.012237	0.010036	0.010424	0.0041632	0.0033299	0.69372	-0.73433	0.013492	0.017336	0.013911	0.015587	-0.15195	0.016006	-0.077078	0.017264	0.0016563	-0.018902	0.0097276	0.018321	-0.85289	0.53491	0.7591	0.11682	0.031155	-0.024935	-0.0056757	-0.3405	0.019946	0.006109	0.00041593	-0.005261	-0.0003122	0.035242	0.024829	-0.1609	0.06494	-0.049289	0.67196	0.73954	0.029369	0.040326	-0.0020132	0.019503	0.012934	0.0077783	0.025952	-0.019177	0.024408	0.0091705	-0.11141	0.024268	0.37775	0.0051359	-0.71051	0.49137	-0.0055375	-0.88895	-0.035312	0.0082358	0.0051317	-0.0017101	0.0122	-0.16177	0.015308	0.023118	0.014051	0.014284	0.018243	0.01433	-0.0066432	0.021744	-0.00017597	-0.022058	0.018243	0.016283	-0.00041585	0.10979	0.00029559	0.033408	0.0013127	-0.033504	0.77038	-0.0045983	0.0037465	0.013353	0.11303	-0.032941	0.0068044	-0.7772	-0.80774	0.6629	0.02511	0.0058309	0.081322	-0.76046	0.00055459	0.018103	0.13875	1.0723	0.013492	0.022771	0.01433	0.010424	0.13892	-0.68961	-0.32797	0.0029133	0.007969	
Deletion Peak  3 - CN values	2q34    	chr2:1-243199373(probes 129193:260550)             	chr2:212238542-213412425(probes 242158:242873)  	chr2:212812791-212815800(probes 242516:242517)	0.25493	    0.25493		Actual Copy Change Given	-0.0008316	-0.0014422	0	0.0013812	-0.0072743	-0.0040162	-0.011335	-0.06048	-0.0037395	-0.0055375	-0.55377	-0.0058887	-0.0050136	0.026092	0.28074	0.0015255	-0.00027724	-0.28084	-0.0023553	0.0066653	-0.6902	0.53819	-0.011749	-0.027261	0.003191	-0.0032835	0.0056888	-0.0030475	-0.0093368	-0.0037532	-0.046583	-0.89063	0	-0.013231	0.023847	-0.0069195	0.00066008	0.0038854	-0.38075	-0.015407	-0.010787	-0.019966	0.0012481	-0.0045695	-0.17853	0	-0.41882	0.0011093	-0.0036435	0.011679	0.0043021	0	-0.0020784	-0.00027724	-0.0096806	0.0038854	-0.012171	-0.00055444	0	0.00041593	-0.0063251	0.0012481	-0.0036011	0.022164	0.0026357	0.013353	-0.0092666	-0.025764	0.01433	0.0066972	-0.0069195	-0.01354	-0.00041585	-0.0062711	0.0027745	0.001902	0.0016642	0.0058309	-0.0053992	0	-0.0038779	0.0034687	0.012516	0.0035336	-0.0023553	-0.13587	-0.020001	0.0038854	0.0029133	-0.6385	0	0.0020805	-0.80285	-0.020961	-0.0053212	-0.0071958	-0.0011087	-0.024453	0.092025	-0.0037808	-0.0038779	-0.075332	-0.019177	0.010982	-0.79453	0.014051	-0.0094046	-0.0012473	0.013772	0.00097064	-0.03395	0.0065262	0.023098	0	0.0011331	-0.0078863	-0.48792	-0.0056757	-0.011105	-0.0008316	-0.012801	0	-0.0096806	-0.00013862	0.00041593	-0.0008316	-0.0015243	0.0084743	-0.0011087	-0.0026322	-0.016841	-0.010646	0.013112	0.022656	-0.0045695	0.014051	-0.016267	0.0038991	0.012795	-0.01849	-0.0027427	-0.0023553	-0.025072	-0.0059644	-0.0070576	0.70382	-0.0080244	-0.010508	0.0043021	-0.037898	-0.0041834	-0.021235	0.001803	-0.010094	-0.0089608	-0.026601	0.0097276	-0.30369	-0.0063668	0.0144	
Deletion Peak  4 - CN values	3p24.1  	chr3:27762089-28433157(probes 275441:275909)      	chr3:28372415-28393386(probes 275894:275895)      	chr3:28358261-28398245(probes 275885:275897)    	6.0163e-07	  6.407e-07		Actual Copy Change Given	-0.020001	-0.00041585	0.020063	-0.65817	-0.013953	-0.014228	0.0038854	0.014749	0.00055459	-0.0022168	-0.57101	-0.40207	-0.015059	-0.80815	-0.36011	0.0081684	0.019923	0.018103	-0.00027724	-0.50733	-0.0023553	-0.41069	0.014609	0.015866	-0.0030475	-0.63576	0.0081959	-0.030267	-0.0060225	-0.005261	-0.39642	-0.087918	-0.40119	-0.8117	-0.19537	0.020763	0.0021861	-0.36193	-0.3887	-0.90195	-0.70516	-0.28365	0.0080567	-0.84171	0.015308	-0.011086	0.03031	-0.012713	-0.010784	-0.056712	-0.81814	-0.29189	-0.016017	0.030169	0.012376	-0.46664	-0.93489	-0.69889	-0.037988	0.611	-0.013606	0.88766	-0.58637	-0.73906	0.018803	-0.51751	-0.16596	-0.019322	-0.040073	-0.27512	0.63664	-0.046041	0	-0.84907	-0.24265	0.0040689	-0.060345	-0.59434	-0.70037	-0.87242	-0.72093	-0.0049844	0	-0.010508	0.013632	-0.2497	-0.5714	-0.056981	-0.0054495	-0.048212	-0.16073	0.017963	-0.84269	0.011818	0.071822	0.01433	0.0022572	-0.7553	0.0063871	-0.076012	0	-0.10682	-0.56206	-0.34584	0.02787	0.013492	0.0038854	-0.012576	0.058937	-0.35533	0.0093098	0	-0.5547	-0.50862	-0.69756	-0.73082	0.026767	0.020343	0.0087251	-0.059	-0.84862	-0.0013858	-0.85821	-0.01155	-0.016086	0.038065	0.020483	-0.010094	-0.21953	-0.0084385	-0.85154	-0.85781	-0.58046	-0.78593	0	-0.0040231	0.022753	-0.51752	0.010006	-0.016429	-0.73033	0.016425	-0.018765	-0.010232	0	0.001803	-0.74473	-0.0040162	-0.015329	0	-0.086518	0.022444	0.023426	0.023987	-0.03681	-0.68035	0.13007	-0.34458	0.00597	-0.38632	
Deletion Peak  5 - CN values	3q26.1  	chr3:161217822-163894013(probes 348829:349973)  	chr3:162886387-163028655(probes 349489:349538)  	chr3:162951757-162968668(probes 349514:349515)	2.0735e-06	 2.0735e-06		Actual Copy Change Given	-0.038547	-0.00041585	-0.79553	-0.65127	-0.013953	-0.014228	-0.0048461	-0.6783	-0.0077482	-0.0022168	-0.57101	-0.40207	-0.0051227	0.0114	-0.36011	-0.45276	-0.76919	0.018103	-0.00027724	-0.51074	-0.43427	-0.40285	-0.88889	0.0066653	-0.0047079	-0.63576	1.8409e-05	-0.030267	-0.0060225	-0.005261	-0.40196	-0.051391	-0.3905	-0.013127	-0.18785	-0.86649	-0.035345	-0.36701	-0.3887	-0.88338	-0.70289	0.0070826	-0.6008	-0.86164	-0.81348	-0.32056	0.03031	-0.012713	-0.016017	-0.052666	-0.81129	-0.29189	-0.015054	0.0030522	-0.72447	-0.46664	-0.93611	-0.69541	-0.028081	-0.63252	-0.013606	-0.91221	-0.58712	-0.74358	-0.82879	-0.51084	-0.061152	-0.019322	-0.026382	-0.27512	-0.62035	-0.012713	-0.0076537	-0.85219	-0.079139	0.010424	-0.060345	-0.59097	-0.70028	-0.85432	0.0075	-0.0049844	0	-0.010508	-0.79135	-0.2497	-0.56992	-0.70917	-0.001002	-0.040752	-0.16073	-0.69051	-0.82432	-0.82032	-0.8235	-0.65389	-0.57447	-0.88607	-0.7495	-0.75797	0	-0.10236	-0.59711	-0.36635	-0.81745	-0.72013	-0.57437	-0.022195	-0.85583	-0.36431	-0.86507	0	-0.5547	-0.4906	-0.69756	-0.73355	-0.82979	-0.6804	-0.9196	-0.091244	-0.84808	-0.0013858	-0.84747	-0.024935	-0.0077482	-0.86042	-0.76218	-0.023896	-0.22649	-0.0084385	-0.85154	-0.0021508	-0.57365	-0.010024	-0.5796	0.0062481	-0.81258	-0.51536	0.015168	-0.041702	0.0078524	-0.80144	-0.63547	-0.010232	0	0.001803	0.02806	-0.0040162	-0.015329	-0.0051227	-0.02562	-0.88743	-0.84891	-0.65351	-0.03681	-0.67244	-0.68942	-0.34458	-0.56643	-0.38632	
Deletion Peak  6 - CN values	4q22.1  	chr4:90762789-91050179(probes 416818:416919)      	chr4:90804644-90958045(probes 416843:416872)      	chr4:90823953-90828387(probes 416858:416859)    	0.0035492	  0.0035799		Actual Copy Change Given	-0.0048461	0.0012481	0.01447	0.015866	-0.015741	-0.0012473	-0.0044312	0.00013863	-0.0020784	-0.0030475	0.016286	-0.0073339	0	-0.0060153	-0.03095	0.0022193	0.00458	0.0015255	-0.00097017	-0.00055444	0.004719	-0.44189	-0.0049844	-1.26	0.0019418	0.012097	-0.01354	-0.0040162	-0.0038098	-0.007472	-0.050641	-0.0062162	-0.38392	-0.010784	-0.58206	0.0072683	-0.0084716	0.0077783	0	0.048749	0.0073609	-0.016292	0.011261	0.017544	-0.28501	-0.015556	-0.45747	-0.0094046	-0.01354	-0.37392	0.015636	-0.3856	-0.0083005	-0.00055444	-0.7257	-0.22724	0.0027745	0.013074	-0.0059522	-0.0022168	-0.011678	0.88146	0	0.027919	0.006109	-0.23153	-0.010922	-0.02042	0.0088049	0.0022193	-0.0070576	-0.012259	-0.024661	-0.0035366	0.0052749	0.012934	0.0029626	0.011539	0	0.035806	0.0040243	-0.00055444	0.012237	-0.0091286	-0.010508	-0.012438	0.00039218	-0.00027724	0.0041632	0.011261	-0.0069465	0.030451	0.0036076	0.11521	-0.011473	0.00013863	0.003191	-0.0096806	-0.016429	0.0060727	-0.012024	-0.038564	-0.010309	-0.90312	0.024127	0.016705	-0.0024938	-0.026988	0.062794	0	-0.0031859	-0.0022763	-0.32182	0.069143	0.028787	-0.0044312	0.0070551	-0.0020784	0.0014801	0.049114	0.023145	0.00041593	0.0077783	0.56614	0	0.010006	-0.00068005	0.0049969	-0.011473	-0.0022168	0.044149	-0.0008316	0.0011474	-0.017183	0.0084433	0.0019746	-0.048072	0.026949	0.030169	0.0066653	0.0040982	-0.0008316	0.0062481	-0.0060904	-0.0071397	1.714	0.020286	-0.0044312	-0.018765	-0.00079197	-0.013264	0.016845	0.027076	-0.68058	-0.0056757	0.0051115	-0.011749	-0.33387	0	0.015937	
Deletion Peak  7 - CN values	4q35.2  	chr4:169747574-191154276(probes 460127:469753)  	chr4:187185386-187216387(probes 468847:468880)  	chr4:175147971-191154276(probes 463013:469753)	0.0034221	   0.003186		Actual Copy Change Given	-0.0048461	-0.0016629	0.021092	0.015866	-0.015741	-0.0012473	-0.0089906	0.00013863	-0.017803	-0.79995	0.016286	-0.0073339	0	-0.0060153	-0.03644	0.0022193	0.00458	0.0015255	-0.00097017	-0.00055444	0.004719	-0.46476	-0.01037	0.011539	-0.0030549	0.012097	-0.0023553	-0.0040162	-0.010716	-0.007472	-0.050641	-0.95381	-0.38392	-0.010784	0.021183	0.011539	-0.0091617	0.0077783	0	0.019004	0.0073609	-0.020961	0.0090312	0.011121	-0.80931	-0.011362	-0.45747	-0.0094046	-0.01354	-0.043944	0.0072625	-0.3856	0.022725	-0.0023553	0.0041632	-0.22724	0.0037465	0.0059478	-0.014504	-0.0075491	-0.0089192	-0.92622	0	0.027919	0.006109	-0.23153	0.0030748	-0.02042	0.16325	0.00092506	-0.011312	-0.012713	-0.024661	-0.0035366	0.0066653	0.012934	0.0034687	0.013277	0	0.035806	-0.0060366	-0.00055444	-0.0031688	-0.0091286	-0.017116	-0.013088	0	-0.01106	0.0041632	0.011261	4.4941e-05	0.030732	0.022157	0.11301	-0.020063	0.00013863	0.003191	-0.0096806	-0.016429	-0.00069303	-0.012024	-0.038564	-0.010309	-0.0069195	0.024127	-0.0027707	-0.0035709	-0.026988	0.036935	0	-0.0034627	0.015447	-0.30102	0.1181	-0.97713	-0.0044312	0.0046915	0.0026357	0.0014801	0.049114	0.023145	0.00041593	0.010188	0.5713	0	0.010006	0	0.0049969	-0.011473	0.0038854	-0.0085766	-0.88136	0.0022573	-0.024454	0.0058309	0.0038854	-0.048072	0.026949	0.030169	-0.03095	0.0040982	-0.0008316	0.0062481	-0.0060904	-0.0034627	-0.9077	-0.0031859	-0.014397	-0.018765	-0.0070576	-0.030131	0.016845	0.02418	0.0029441	-0.017402	-0.0070819	-0.5898	-0.32809	0	0.012582	
Deletion Peak  8 - CN values	5q15    	chr5:79949348-113842067(probes 512497:530297)    	chr5:93948876-94036005(probes 519756:519793)      	chr5:93991320-93995588(probes 519775:519776)    	0.010326	   0.009912		Actual Copy Change Given	0.0065262	0.0052749	0.0066653	-0.54138	-0.00013862	0	-0.005261	0.023145	-0.006505	0.0011093	0.015447	0.010285	0.51385	0	-0.016017	0.0023581	-0.0011087	-0.061958	0.0013868	0.015447	0.012655	0.094782	0.0033299	-0.0067813	0.0019418	0.0056919	0	-0.00097078	0.0031204	-0.0014039	-0.007472	0.0036696	-0.0049844	-0.012515	0.0024969	0.0066653	-0.04325	-0.3729	0.0076714	-0.89401	0.013286	-0.0024241	-0.0016629	0	-0.024661	-0.023372	-0.45794	-0.0038779	0	0.00097064	0.010006	0.099724	-0.0018014	0.014051	0.0013868	0.022725	-0.94063	0.0095883	-0.011887	0	0.015449	0	0.0074024	0.030591	0.0013868	-0.11691	-0.019314	-0.0054072	0	0.0090312	-0.013264	-0.0033243	-0.015879	0.0034687	-0.0047079	0.015447	0.00097064	0.011539	0.011958	0.024127	0.0023581	0.0056919	-0.034904	-0.0019399	-0.0040162	-0.037898	0.010285	0.019783	0.020763	0.0062481	0.01717	0.012376	0.010842	0.0038854	0.0015255	-0.00041585	0.0013868	-0.00041585	-0.0040162	-0.76612	-0.0036011	0.90676	-0.01849	-0.094196	0.033272	-0.68472	0.4611	0.51594	0.0012481	-0.022846	0.0058309	-0.0029091	0.030403	0.50372	0.024432	0.0034687	0.017936	0.015866	0.0011387	-0.00027724	0.076854	-0.0043587	0.024408	0.57697	0.00069327	-0.86633	0.018243	0.00013863	0.0076392	-0.0015243	0.029888	-0.0056757	-0.029274	-0.0043604	0.0015255	-0.013127	0.00069327	0.012529	0.0063871	-0.00054607	0	0.010982	-0.00055444	0	0.0090312	0.0068044	-0.74603	0.00041593	-0.016287	0.0052749	0	0.0016642	-0.84331	0	0	-0.11142	0.019129	0.41195	0.00083195	0.023777	
Deletion Peak  9 - CN values	6p12.3  	chr6:49915604-49978544(probes 599664:599697)      	chr6:49934736-49938340(probes 599675:599676)      	chr6:49924408-49949110(probes 599669:599680)    	0.00080576	 0.00081059		Actual Copy Change Given	0.015168	0.00083195	0.81006	0.019503	-0.0037973	0.80831	0.0014661	0.67048	-0.0034627	0.0037465	0.0080567	-0.0048461	0.49749	-0.0011087	0.30346	0.0020805	0.013772	0.0027745	0.0022193	0.0090312	0.0075	-1.0279	0.0068044	-1.0719	0.0027745	0.0114	0.00458	0	0.0023202	-0.0024938	0.011679	0.0039474	0.36863	-0.00055444	-0.72765	0.0056919	-1.1224	0.015168	0.0043343	0.0063086	0.0038854	0.010868	-0.032341	0.034113	0.018243	-0.008603	0.07369	0	0.0078634	0.83176	0.015168	0.095798	0.013911	0.0081959	0.014888	0.014609	0.021183	0.0097276	-0.014392	-0.007472	0	-0.0007399	-0.019726	0.019643	0.0094491	0.048262	-0.0023553	-0.0020863	0.014888	-0.0026844	0.0075	-0.0010175	-0.061689	0.0041632	0.014749	0.63518	-0.01196	0.010006	0.015168	0.027227	-0.0012008	0.00097064	0.024969	-0.005261	0.018103	0.023706	0.10789	-0.056173	0.0013868	-0.0016629	0.005737	-0.05496	0.028763	0.0075763	0	0.0043021	0.0025308	0.022585	0.0012481	0.017176	0.00041593	0.0024805	-0.90927	-1.002	0.02511	0.018103	0	-0.013264	-1.0869	0.0062481	0.0044839	-0.84795	0.015679	0.48131	0.022188	0.0084743	-0.031523	0.036229	0.0063416	0.012097	0.0095883	0.0022193	0.030873	-0.017803	0.85462	0.023005	-0.041159	0.02525	0.0048579	-0.0012643	0.029747	0	0.033165	-0.0049136	0.0075	0.023005	-0.016429	0.11185	-0.0026322	0.031999	-0.022396	0.012097	0.012237	0	0.0038854	-0.00013862	0.012097	0.0027745	-0.03504	-0.016292	0.0007668	0.019643	-0.39686	0.0051359	-0.007472	0.01277	-0.01738	0.40398	0.0011093	-0.15777	
Deletion Peak 10 - CN values	6q16.1  	chr6:92231219-94419827(probes 620955:622361)      	chr6:93944741-94130625(probes 622057:622181)      	chr6:94029783-94043047(probes 622110:622123)    	0.0065852	   0.006558		Actual Copy Change Given	0.015168	0.00083195	-0.79302	0.019503	-0.0037973	0.027638	0.0014661	-0.32461	-0.0034627	0.0037465	0.0080567	-0.0048461	0.50658	-0.0011087	0.30346	0.0020805	0.012234	0.0027745	0.0022193	0.0090312	0.0075	-0.70854	0.0027039	-0.17752	0.0027745	0.0114	0.00458	0	0.0023202	-0.0024938	0.011679	-0.01367	0.36863	-0.00055444	-0.035993	-0.86712	-1.2114	0.013213	-0.0028012	0.047745	0.0038854	0.011958	-0.032341	-0.90221	0.018243	-0.074372	0.056228	-0.010232	0.0078634	0.00041593	0.015168	0.095798	-0.00097017	0.0081959	0.0080567	0.014609	0.021183	0.0097276	0.0033299	-0.007472	0	-0.0007399	-0.019726	0.028481	0.0094491	0.048262	-0.0023553	-0.020978	0.014888	0.0055529	0.0075	-0.0010175	-0.061689	0.0041632	-0.81425	-0.68924	-0.01196	0.010006	0.015168	-0.8571	-0.0012008	0.00097064	0.008892	-0.005261	0.00027728	0.023706	0.10789	-0.056173	0.0013868	-0.039529	0.005737	-0.05496	0.028763	0.0075763	0	0.0043021	0.0025308	-0.016127	0.0012481	0.017176	0.00041593	0.020077	-0.89404	-1.0676	0.02511	-0.61489	0	-0.013264	-0.96222	0.0062481	0.0044839	-0.98301	0.041976	0.48131	0.022188	0.0084743	-0.031523	-0.68606	0.0063416	-0.0046956	0.0095883	0.0022193	-0.85833	-0.017803	0.85462	0.035665	-0.041159	-0.66346	0.0048579	0	-0.85623	0	0.033165	-0.0049136	0.0075	0.0050579	-0.016429	-0.66049	-0.0026322	0.031999	-0.022396	0.012097	0.012237	0	0.0038854	-0.0033243	0.012097	0.0027745	-0.03504	-0.016292	0.0007668	-0.88619	-0.39686	0.0051359	-0.007472	0.01277	-0.60051	0.40398	0.0011093	-0.15777	
Deletion Peak 11 - CN values	7q33    	chr7:57244042-159138663(probes 700225:748188)    	chr7:136579757-136853013(probes 737052:737250)  	chr7:136710123-136712154(probes 737152:737153)	0.21002	    0.20428		Actual Copy Change Given	-0.012713	0.00055459	0.010006	0.64019	0.004719	-0.0033243	-0.0054701	0.010842	-0.0037395	0	0.0048579	0.0084743	0.50359	-0.0019399	0.30761	0.0029133	0	0.015308	0.0036076	0.008892	0.0090312	0.92837	0.027357	-0.0029091	0.0011093	0.020343	-0.0060362	0.00041593	-0.83045	0.0019418	0.0075834	-0.0022935	0.35398	-0.0029033	0.012376	0.010564	-0.025105	0.0082035	0.0027378	0.012437	-0.71453	0.0094491	-0.61064	0.010564	0.012795	0.013047	0.5822	0.66752	0.022444	0.0049969	0.030029	0.089127	0.62934	0.0083351	-0.00062042	0.017824	0.010703	0.014888	0.62788	0.0081959	-0.0018682	-0.0049844	0.0077783	0.024881	-0.011335	0.045991	-0.0022168	0.0018349	-0.0060904	0.012097	0.018943	-0.0087146	1.1764	0.79374	0.013213	0.0077783	0.0029404	0.0086135	0.015308	0.018906	0	0.028763	0.028424	1.2786	-0.0027707	0.016705	0.13725	-0.057116	-0.0028891	0.00055459	0.038959	-0.51026	0.017264	0	0.0075	0.00013863	0.010063	0.0041632	0	-0.63887	-0.0047079	1.9245	0.17845	0.0048579	0.018663	0.010982	0.023426	0.51403	0.02539	0.012795	-0.072455	0.015727	0.028152	0.0020438	0.094688	0	0.0033024	0.0054139	-0.0011541	0	0.002059	0.012655	0.011958	-0.016154	0.84199	0.0065262	0.013074	0.0024969	0.011121	0.0011093	0.012133	0.0023581	0.026693	0.013285	0.0020805	0.0012481	0.0022193	0.082635	0.90447	-0.0024938	0.0018768	-0.80906	0.0075	0.016286	-0.00027724	0.00597	0.00069327	7.4675e-05	-0.65594	0.01133	0.0076392	0.010707	0.027638	0.0012796	0.013077	0.0028889	-0.70137	0.38876	0.0033299	0.026866	
Deletion Peak 12 - CN values	8p22    	chr8:14710032-16024383(probes 754950:755876)      	chr8:15393394-15624424(probes 755445:755589)      	chr8:15545745-15550198(probes 755518:755519)    	0.02387	    0.02393		Actual Copy Change Given	-0.016429	-0.0023553	-0.049619	0.010146	0.0098669	-0.83648	-0.024736	0	0	-0.00097017	-0.59536	0.0030522	-0.5203	-0.0034627	0.29803	-0.0022168	-0.0042929	0.012516	0	-0.014886	0	-0.48157	-0.006505	0.045708	-0.028943	-0.018287	-0.0020784	0.0019639	0.0084035	-0.00027724	0.003191	-0.92827	0.35235	-0.0020784	0.11565	-0.0044312	-0.050808	0.0079175	-0.012544	-0.0090686	-0.0070208	-0.0059153	0.0065262	-0.3085	-0.0024938	-0.088797	0.061222	0.0034687	-0.0035712	0.45377	0.0056919	-0.91364	-0.013815	-0.0051227	0.0069435	-0.041236	-0.01409	-0.00055444	0.62879	-0.0018014	0.0053468	0.011121	-0.0071958	-0.76052	-0.0067813	0.01015	-0.73923	0.001043	-0.020549	-0.0011087	-0.013264	0.011958	-0.0085766	-0.88023	-0.016017	-0.0091286	-0.0011087	0.0054826	0.0072217	-0.87213	-0.68715	0.0066653	0.026514	0.65351	-0.0071958	0.013277	0.026795	-0.048883	0.001803	-0.0015243	0.021789	-0.0087146	-0.0066432	-0.12382	-0.018765	-0.043195	-0.004954	-0.0066432	-0.77626	-0.0035609	0.61611	-0.10892	0.75746	0.0095883	-0.014503	0.0029133	0.0056919	0.52275	-0.0067813	-0.0035243	-0.0042929	0.0051359	0.024781	-0.49374	0.013098	-0.013677	-0.0021058	-0.0060904	-0.014686	-0.51959	-0.019589	0.0022193	0.0065262	-0.039801	-0.031027	0.012237	-0.005814	-0.0022168	-0.0033243	-0.0056757	-0.87541	-0.014503	-0.0037922	-0.0067106	-0.0059522	0.0019418	-0.024894	0.0019555	-0.037175	-0.77863	-0.026641	-0.0022168	-0.0029091	-0.0049844	0.0066653	0	0.0027745	0.0033299	-0.0030475	-0.69188	-0.9127	-0.92248	-0.032587	-0.42538	0.0054139	-0.0015487	-0.63538	0.074408	-0.0034282	-0.013883	
Deletion Peak 13 - CN values	9p24.2  	chr9:2842384-3826080(probes 831172:831776)          	chr9:3246492-3530634(probes 831507:831641)          	chr9:3341588-3342397(probes 831575:831576)        	0.00078878	 0.00077675		Actual Copy Change Given	0.008892	-0.0033243	0	0	-0.0033243	0.0058309	0.0068044	-0.18898	0.012934	0.033972	-0.0023553	-0.0008316	-0.0070576	-0.013953	-0.016292	0.0044411	-0.010094	-0.069332	-0.056981	0.0079175	-0.0049844	0.021884	-0.00097017	0.0041136	0.001803	0.0027745	-0.0063668	-0.0022168	-0.83749	-0.0011087	0.013353	0.011183	0.35184	-0.0087499	-0.16485	0.0054139	0.0091372	0.006109	-0.75821	0.00061496	-0.018353	0.0090312	0	-0.0055375	0.0034764	-0.3097	0.068808	0.0012481	0.0098669	0	-0.026714	-0.34561	-0.027124	-0.0039185	-0.016567	-0.0050758	0	0	-0.044271	-0.0010342	-0.10191	-0.011434	0.0034687	-0.013815	-0.0042929	0.033267	0	-0.0057377	0.0033299	-0.013127	0.0086135	-0.83274	-0.0045695	0.0062481	-0.012438	-0.005814	0.0044411	0.0024969	0.015587	0.014749	0.0026357	-0.0024938	0.031999	-0.0042929	0	0.0098669	-0.0051227	0.00013863	-0.00055444	0.00055459	-0.010326	-0.074544	-0.0048461	-0.0036011	-0.14989	-0.033132	0	0.027357	-0.010922	0.016985	0.013492	0.82512	0.0011093	-0.34607	0.010564	0.00041593	-0.0073339	-0.012438	0.026373	-0.0042929	-0.0095426	0.001791	0.017636	-0.50414	0.29186	-0.0063668	0.003719	-0.0059389	0.0049514	-0.048326	0.0012597	-0.0041546	-0.0024938	0	0.81415	0.0037465	-0.0024938	0.00041593	0.002099	0.0023581	-0.0053992	-0.0051584	0.0062862	0.014262	-0.0051227	-0.00027724	0.0075	0	-0.031496	0.0024969	0.0096625	0.0040243	0.0039986	0.0091705	-0.0053992	-0.91409	0.014051	-0.023429	-0.0034627	-0.00027724	-0.11428	-0.89309	0.01718	-0.026577	0.00027728	-0.020436	-0.58569	0	0.00013863	-0.0224	
Deletion Peak 14 - CN values	9q21.12 	chr9:73027614-74298719(probes 854607:855588)      	chr9:73396880-73489041(probes 854883:854967)      	chr9:73435029-73436669(probes 854926:854927)    	0.040575	   0.039541		Actual Copy Change Given	0.008892	-0.0033243	0	0	-0.0033243	0.0058309	0.0068044	-0.18898	0.012934	0.033972	-0.0023553	-0.0008316	-0.0070576	-0.79474	-0.016292	0.0010135	-0.03817	-0.069332	-0.056981	0.0079175	-0.0049844	0.015308	-0.00097017	-0.0041546	0.00083195	0.0027745	0.019264	0.0012481	-0.05419	-0.0011087	0.013353	0.0048696	0.3633	0.023145	-0.19375	0.0054139	0.0040466	0.006109	-0.75821	-0.90567	-0.0044312	0.0091705	0	-0.011278	0.0034764	-0.29582	0.068808	0.0012481	0.0098669	0	-0.026714	-0.34561	0.006109	0.016705	-0.012713	-0.0050758	0	0	-0.057223	-0.0010342	-0.01085	-0.011434	0.0034687	-0.034158	-0.0042929	0.033267	0.0072217	0.0052669	0.0033299	-0.013127	0.0086135	-0.0060904	-0.0045695	-0.82717	-0.012438	-0.005814	0.0044411	-0.014718	0.015587	0.014749	0.0019355	-0.0024938	0.031999	-0.0042929	0	0.0098669	-0.0051227	0.00013863	-0.00055444	0.00055459	-0.023943	-0.074544	-0.0020784	-0.0036011	-0.14989	-0.021997	0	0.027357	-0.72596	0.016985	0.013492	0.82512	0.0011093	-0.36215	0.0065262	0.00041593	-0.0073339	-0.012438	-0.00041585	-0.0042929	-0.0095426	0.0012481	-0.0060769	-0.50414	-0.71408	0.011121	0.003719	0.013492	0.0049514	-0.048326	0.0012597	-0.0041546	-0.0024938	0	0.77445	0.0037465	-0.0024938	0.00041593	0.010703	0.0023581	-0.0053992	-0.0051584	0.0062862	0.014262	-0.0051227	-0.00027724	0.0075	0	-0.031496	0.0024969	0.0096625	0.0040243	0.0022193	0.0091705	-0.0053992	0.016006	0	-0.03095	-0.0034627	-0.00027724	-0.11428	0.0093379	0.042449	-0.026577	0.00027728	-0.020436	-0.0041546	0	0.00013863	-0.0224	
Deletion Peak 15 - CN values	11p15.4 	chr11:1-11293017(probes 978729:984791)             	chr11:7038591-7096811(probes 981924:981962)        	chr11:1-12149530(probes 978729:985552)           	0.00054378	 0.00051791		Actual Copy Change Given	0	-0.010646	0.64451	-0.65696	-0.95818	0.80928	0.015866	-0.038714	0.013772	0.011261	-0.019314	-0.75115	-0.0015243	0.0016642	-0.34561	-0.0015243	0.0032618	-0.30686	0.0054139	-0.51517	-0.71595	-0.0008316	-0.8902	-0.53002	0.017824	-0.0094046	0.017264	0.014051	0.017613	0.004719	-0.41212	-0.92044	-0.41317	0.0075404	-0.40782	0	0.024655	-0.76723	-0.78089	-0.027351	-0.0023871	-0.54633	0.0038854	-0.92689	-0.068648	0.021156	0.065513	-0.69794	-0.60799	-0.60342	-0.026777	-0.38906	0.003191	-0.028765	-0.0023553	-0.47564	0.0011093	-0.0022168	-0.72479	-0.0020784	0.017336	-0.0073197	0.18904	-0.7476	-0.0022168	-0.53093	-0.83905	-0.84002	0.0058309	-0.2707	-0.0033243	0.016146	-0.0048461	-0.018353	0.0020805	-0.00098022	-0.0012473	-0.60119	-0.70145	0.0012481	-0.73906	-0.78933	-0.013402	-0.67548	0.00027728	-0.50846	-0.57918	0.012516	-0.0059522	0	-0.82307	0.014888	-0.0038779	-0.021647	0.0076531	0	0.0093098	0.0114	-0.04577	-0.042381	-0.0038779	-0.12562	-0.82147	-0.74551	-0.0080244	-0.0023553	-0.0072942	-0.52563	0.0019418	-0.71586	0.62934	-0.010232	-0.57322	-0.16564	-0.7035	0.026795	-0.010398	0.028763	-0.000877	0.0087528	0	-0.00067885	-0.85496	0.0034687	-0.028081	-0.85963	0.00458	0.59566	-0.0098185	0.015447	0.004719	-0.0056757	-0.59114	0.030382	-0.57842	-0.0026322	-0.036946	-0.0076777	-0.042771	0	-0.0032507	-0.0019399	-0.01482	0.023005	-0.94597	-0.0059522	-0.74933	-0.91545	0.00458	0.044857	0.033831	-0.0048461	-0.39642	-0.01354	-0.6992	-0.12358	0	-0.39526	-0.56139	-0.58093	
Deletion Peak 16 - CN values	11q22.1 	chr11:96126036-100558999(probes 1030897:1033670)	chr11:99423136-100231244(probes 1032870:1033442)	chr11:99831552-99832533(probes 1033157:1033158)	1.462e-05	  1.462e-05		Actual Copy Change Given	0	-0.010646	0.64451	-0.65696	-0.95818	-0.071071	0.0076392	-0.079476	-0.72632	-0.77107	-0.019314	-0.78446	-0.0015243	-0.0096806	-0.35768	-0.0015243	0.0032618	-0.31057	0.0054139	-0.51311	0.0062481	0.048546	-0.88928	-0.0016629	0.017824	-0.0094046	-0.0063668	0.0065262	0.017613	0.004719	0.015308	0.023769	-0.40517	0.015308	0.018663	0	0.0081626	-0.35829	0.010457	-0.0018796	0	-0.55377	0.0038854	-0.027124	-0.81444	0.0016452	-0.44911	0.0084743	-0.60748	-0.60332	-0.026777	-0.38906	-0.0012473	0	-0.0023553	-0.47564	-0.0062286	-0.0022168	-0.72252	0.00597	0.011333	-0.0018014	-0.47607	0.01419	-0.0029091	-0.53205	-0.0080244	-0.84002	0.0058309	-0.26961	-0.034086	-0.85773	-0.0048461	-0.86334	-0.0049844	-0.0091286	-0.0012473	-0.60119	-0.70483	0.0012481	-0.0016629	-0.78933	-0.013402	-0.67223	0.00027728	-0.50846	-0.57605	0.00597	-0.0059522	0	0.0029367	-0.045364	0.0044411	-0.0056757	0.0076531	0	-0.014852	0.0114	-0.04577	-0.042381	-0.012365	-0.12562	0.0033759	-0.035176	-0.0080244	-0.0023553	-0.0072942	-0.53032	-0.0024938	0.0097447	0.011818	-0.01106	-0.57233	0.30581	-0.0053756	0.00037222	-0.010398	0.028763	-0.000877	0.00029425	-0.0036011	-0.00027724	-0.84795	0.0034687	-0.022332	0.0023581	-0.020412	-0.020138	-0.0098185	-0.0020784	0.004719	-0.0081624	-0.57957	-0.76281	0	-0.0026322	-0.036946	-0.0076777	-0.010508	-0.76569	-0.0032507	0.0056919	-0.01106	0.0020805	0.0049969	-0.0059522	0.0012481	0.0020805	0.00458	-0.76415	0.010842	-0.0044312	-0.84475	-0.01354	-0.70333	-0.13641	0	-0.38044	0.0019124	-0.58093	
Deletion Peak 17 - CN values	12q21.33	chr12:91383361-91498710(probes 1105712:1105768)  	chr12:91442316-91452893(probes 1105733:1105743)  	chr12:91443310-91466444(probes 1105734:1105757)	0.0099067	   0.009912		Actual Copy Change Given	0.010006	-0.0023553	-0.0016629	0.0026357	0.0069435	0.012934	0.004719	0.0095883	0.0055529	0.0024969	0	0	0.49199	0.012824	0.30138	-0.0026322	0.0041632	0.0075826	0.0028626	0.010285	0.00027728	-0.65062	-0.0019399	-0.041974	-0.0011087	-0.00055444	0.0030522	0.0080567	0.0039537	0.0027745	0.011958	-0.0069959	0.34171	0.0062481	-0.85019	0.0058309	-0.58875	-0.0020784	0.0068366	0.016766	0.011261	0.015727	-0.066118	0.01881	0.0038854	-0.012051	0.055449	-0.00013862	0.0081959	0.0027745	-0.015466	0.084065	-0.67753	0.0052749	-0.007472	0.018207	0.0114	0.0038854	0.57358	0.0070826	0.0053468	0.0072217	0.003945	0.010703	0.0041632	0.047277	-0.010094	0.003526	-0.0055375	0.0013868	0.012237	-0.0014787	0.013911	0.0069435	0.0087528	0.62737	0.0034687	0	0.012097	0.0054139	0.0048579	0	0.033721	0.0049969	0.011121	0.02511	0.13628	0.017404	0.00027728	0.019503	0.03633	0.00055459	0.0084743	0.0015255	-0.55737	0.0036076	0.00097064	0.024127	0.21653	0.028763	0.00069327	0.87071	0.015447	-0.63206	0.012879	0.0098669	0.3743	-0.0085851	-0.87111	0.016425	0.039478	-0.0047079	0.0099587	0.42011	0.0025206	0.0035469	0.012488	0.010842	0.89848	0.010842	0.00597	-0.00013862	0.0024969	0.026529	-0.02076	0.010842	0.026152	0	0.089851	-0.0025157	0.018943	0.0070826	0.029926	0.003401	0.0041632	0.0022193	0.09039	0.0096021	-0.027809	0.0052338	0.019437	0.0072217	0.0076392	0.004719	0.092025	-0.0088526	0.016146	-0.00034958	0.038065	0.0072217	-0.015466	0.0066653	-0.38471	0.019083	0.0024969	0.02112	0.011958	0.4031	-0.0013858	0.019713	
Deletion Peak 18 - CN values	13q22.3 	chr13:1-115169878(probes 1129989:1186663)       	chr13:78468161-78504854(probes 1163948:1163969)  	chr13:78470351-78489560(probes 1163951:1163964)	0.25493	    0.25493		Actual Copy Change Given	-0.0063668	0.00097064	-0.0024938	0.21085	-0.0077482	-0.00041585	-0.010094	-0.0044312	-0.0095426	-0.0030475	0.00597	0.0054139	-0.0016629	-0.011887	0.29867	-0.0089906	-0.007472	-0.00069303	-0.0027707	0.0087528	0.0036076	-1.1614	-0.0073339	-0.6096	-0.0018014	-0.0030475	-0.013127	-0.0023714	-0.0048622	-0.0023553	-0.0123	0	0.37463	-0.019726	-1.1785	-0.00013862	0.0063539	0.0091457	0.0015576	0.010764	-0.0076101	0.013492	0.00027728	-0.00097017	0.026654	0.56131	0.53503	0.078582	-0.012576	-0.0066432	-0.04428	0.091445	-0.01354	-0.0059522	0.018663	0.015727	-0.0091286	-0.0073339	-0.012605	-0.010508	-0.010724	0.095944	-0.0087146	-0.73143	-0.0022168	0.047694	-0.011749	0.75795	-0.011887	-0.00027724	-0.0012473	-0.01589	0.00041593	-0.0038779	-0.0041546	0.013074	0	0.017684	0.0026726	0.0097276	-0.014366	-0.014503	-0.038578	-0.0016629	-0.13057	0.012655	0.11213	-0.005261	-0.00013777	-0.057385	0.019408	-0.48449	0.0033299	0.011261	-0.0049844	-0.013815	-0.0038779	-0.025596	-0.011749	0.0015255	-0.031225	0.90597	-0.025756	0	0.0077078	0.0075	-0.013677	0.49683	0.043015	0.0070826	-0.015957	-0.0024938	0.030966	-1.0106	0.010448	-0.017536	-0.00044328	-0.0018014	-0.01014	-0.019726	-0.0084385	0.0036076	0.0084743	-0.030648	0.00055459	0	-0.0053992	-0.022195	-0.0098185	-0.0045695	0.0048579	-0.0063678	0.027536	-0.032108	0.00097064	0	-0.015329	-0.090348	0.015259	-0.029175	-0.0075366	-0.0015141	0.0041632	-0.0094046	0.0028025	0.0063871	0.0026536	-0.0086069	-0.0033243	-0.0098288	-0.0020784	0	0.015587	0.0012481	-0.018316	-0.0040405	0.0022193	0.4158	-0.0044312	0.014819	
Deletion Peak 19 - CN values	16q21   	chr16:59786558-64981096(probes 1303276:1306502)  	chr16:61684449-62071400(probes 1304370:1304621)  	chr16:61875408-61883530(probes 1304496:1304497)	0.0033927	   0.003186		Actual Copy Change Given	0.026092	0.0011093	-0.010922	-0.016154	0.029044	0.02525	0.0011093	0.0087528	0.023426	0.0083351	-0.018705	0.0016642	0.48871	0.0070826	-0.0049844	0.00041593	-0.0026322	0.0065262	0.019503	0	-0.017803	-0.18836	0	0.00458	-0.0030475	-0.0077482	0.018762	0.012237	0.071605	0.0040243	0.015629	0.0063101	-0.050506	0.041332	0.058937	-0.00097017	0.010252	-0.0044312	0.022056	-0.91729	0.016705	-0.043154	-0.0051227	0.0094491	0.018103	0.020316	-0.44545	0.016006	0.017264	-0.0031859	-0.012024	0.094346	0.018103	0.025671	0.0043021	-0.0013858	-0.0051227	-0.0011087	0.55531	0.011261	0.024621	-0.0020784	0.048972	-0.0034627	-0.014648	0.015118	0.019783	0.017119	0.013213	-0.0063668	0.0090312	0.03214	0.13583	0.012237	0.001803	-0.022606	-0.0038779	-0.017254	-0.055512	-0.0099565	0.00867	-0.0034627	-0.034223	0	0.032563	0.00041593	0.092315	0.029325	-0.0029091	-0.0040162	0.02235	0	-0.021235	-0.0018014	-0.048826	0.0097276	-0.010508	0.054803	0.24373	0.027638	0.024829	-0.15885	0.0062481	0.030169	-0.029994	-0.024798	0.00027728	0.011818	-0.028355	-0.046718	0	-0.0095426	-0.030314	0.43699	-0.019126	-0.021098	0.0024694	0.043157	-0.0081047	0.031577	0.0282	0.0052749	0	0.023145	-0.06424	-0.018052	0.012659	0.004719	0.020343	0.0027745	-0.0095426	0.022164	-0.017354	0.025389	-0.0024938	-0.0011087	0.013213	0.035255	-0.066656	0.019083	0.0072958	-0.0036011	-0.0027726	0.023987	0.0084743	-0.0049844	-0.021921	0.013632	0.031014	0.015866	0.075991	-0.0088526	-0.4119	-0.013264	0.021323	0.029722	0.57952	0.0375	0.001803	-0.0014543	
Deletion Peak 20 - CN values	17p13.2 	chr17:6344536-6547775(probes 1324065:1324203)      	chr17:6351225-6461687(probes 1324066:1324147)      	chr17:6394498-6510373(probes 1324091:1324172)    	0.031972	   0.030814		Actual Copy Change Given	0.034395	0.0012481	0.0098669	-0.019452	0.040468	-0.79101	0.045566	0.0013178	-0.71149	-0.76775	-0.020549	-0.81597	-0.035066	-0.80913	-0.014778	-0.0051227	-0.76252	-0.78505	0.019223	-0.022195	-0.056981	-0.040209	-0.89756	-0.031086	0.00458	-0.099355	0.069669	0.018523	0.086694	-1.2446	-0.39864	-0.013065	-0.052126	0.074984	-0.65305	-0.86767	-0.3657	0.00083195	0.018415	-0.064899	0.029644	-0.0091286	-0.013953	-0.8838	-0.047936	-0.2786	-0.43148	0.0076392	0.02539	-0.0099565	-0.037218	0.086377	0.037288	0.033267	0.0080567	-0.24277	-0.95852	-0.0091286	-0.7709	-0.59838	0.048051	-0.10644	-0.71604	-0.8041	0.0054139	-0.4197	0.018103	-0.83107	-0.70064	-0.0094046	-0.61249	0.019643	0.048688	-0.84251	-0.23355	-0.025072	-0.028355	-0.03681	-0.3463	-0.10631	-0.33618	-0.0091286	0.039902	-0.68186	-0.78479	0.011818	-0.56067	-0.58088	0.0036076	0.0084743	-0.83669	-0.082535	0.0072217	0.0094491	-0.30567	0.038771	0.00097064	-0.84851	-0.70523	-0.37561	0.040185	-0.18889	0.029747	0.043299	-0.03395	-0.0083005	-0.076091	0.017124	-0.89187	-0.42276	-0.88766	0.0052749	-0.045952	-0.028664	-0.021623	-0.67738	-0.052743	-0.65845	0.013307	0.029184	0.04176	0.0019418	-0.84515	-0.0094046	-0.078544	-0.021131	-0.57851	-0.65361	-0.77981	-0.00041585	-0.8793	-0.81827	-0.03582	-0.75689	0.0075	-0.0029091	-0.80845	-0.026418	-0.083598	-0.0008316	0.0028484	-0.0022168	0.0097276	0.036512	-0.0019399	-0.88912	-0.014228	-0.91093	-0.70854	-0.70729	-0.82798	-0.00055444	-0.44771	-0.58618	0.013632	-0.69551	-0.017391	0.080745	-0.54925	-0.030471	
Deletion Peak 21 - CN values	17q11.2 	chr17:29326736-29622105(probes 1332847:1332967)  	chr17:29419706-29555153(probes 1332887:1332942)  	chr17:25276328-42543261(probes 1331144:1338943)	3.2375e-10	 3.2167e-10		Actual Copy Change Given	0.034395	0.0012481	0.0098669	-0.019452	0.040468	0.056513	0.045566	0.015028	-0.69441	-0.73117	-0.020549	0.026935	-0.035066	0.0015255	-0.014778	-0.0051227	0.030591	0.0075	0.019223	-0.022195	-0.056981	-0.51527	-0.84947	-0.02603	0.00458	-0.099355	0.069669	0.018523	-0.78357	0.010916	-0.39864	0.88395	-0.052126	0.074984	0.028903	0.040609	0.038982	0.00083195	0.018415	-0.064899	0.029644	-0.0091286	-0.013953	-0.8331	-0.047936	-0.89673	-0.43148	0.0076392	0.02539	-0.0099565	-0.037218	-0.8793	0.037288	0.033267	-0.66365	-0.24277	-0.92853	-0.0091286	0.53134	-0.59838	0.048051	-0.88635	-0.71604	-0.016017	0.0054139	-0.4197	0.018103	0.042106	0.016088	-0.0094046	-0.61249	0.032704	0.048688	-0.81491	-0.79803	-0.025072	-0.028355	-0.03681	-0.3463	-0.10631	0.011121	-0.0091286	0.039902	-0.005379	-0.73424	0.011818	-0.56067	-0.00013862	0.0036076	0.0084743	0.030637	-0.082535	0.0072217	0.0094491	0.067805	0.038771	0.00097064	-0.83155	-0.68296	0.06494	0.040185	-0.16063	0.029747	0.043299	-0.0091286	-0.0083005	0.033549	0.017124	-0.89187	0.03506	0.032422	0.0052749	-0.045952	-0.028664	-0.021623	0.035947	0.026065	0.037782	0.013307	0.029184	0.060079	0.0019418	-0.84515	-0.0094046	-0.078544	-0.021131	-0.57851	0.017592	0.1241	-0.00041585	0.0012481	-0.81827	-0.03582	0.043088	0.0075	-0.0029091	-0.78555	-0.026418	-0.083598	-0.74072	-0.50686	-0.79795	0.0097276	-0.43604	-0.0019399	-0.88912	-0.014228	0.021323	-0.70854	-0.70729	-1.2929	-0.00055444	-0.80269	0.051245	0.013632	1.6062	-0.65826	0.080745	0.0081959	-0.030471	
Deletion Peak 22 - CN values	22q13.31	chr22:47571204-48018269(probes 1498525:1498876)  	chr22:47740203-47770502(probes 1498666:1498685)  	chr22:40851807-51304566(probes 1494362:1499965)	0.00016533	 0.00016533		Actual Copy Change Given	0.03637	-0.0024938	-0.82105	-0.020549	-0.94999	-0.042652	-0.46759	0.023194	-0.74586	0.0055529	-0.022469	0.018803	-0.028301	0.00083195	-0.026851	-0.016841	-0.023566	-0.024661	-0.056712	-0.0081624	-0.18131	0.26169	-0.90343	-0.053476	-0.1307	0.0072217	-0.77914	-0.4749	-0.80439	0.0016642	0.028903	-0.94134	0.26592	-0.77048	0.033267	-0.89465	-0.078176	0.00083195	0.027389	-0.079019	-0.70388	-0.30839	-0.026198	0.058509	-0.84523	-0.60101	-0.43105	-0.020138	-0.046718	-0.085457	-0.58823	0.095508	0.043582	0.04259	0.0091705	-0.0015243	-0.96229	-0.0029091	-0.12642	0.035383	-0.75646	0.00013863	-0.0085766	-0.049289	-0.0044312	-0.049289	0.015308	0.048254	0.017824	-0.022195	-0.03054	0.042449	0.025952	-0.85218	-0.20573	-0.034359	-0.042652	-0.041295	-0.33549	-0.92473	-0.007472	-0.00055444	-0.030813	0.0030522	-0.78875	-0.059679	0.093766	-0.76954	0.00097064	-0.00041585	0.0022643	-0.15106	-0.0091286	0.0091705	-0.62054	-0.62389	-0.0016629	-0.84907	-0.70621	-0.73722	0.04429	0.68293	0.023145	-0.010094	-0.88571	-0.8408	-0.19686	0.030732	-0.0088526	-0.11456	0.021043	-0.0067813	-0.062138	-0.53045	-0.07688	-0.7411	-0.57484	-0.67251	-0.93838	-0.47923	-0.83607	-0.0024938	-0.84707	0.035947	-0.09855	-0.10828	-0.17487	-0.10588	-0.055499	0.004719	-0.90358	-0.83486	-0.066751	-0.75947	0.013074	-0.0073339	-0.8103	-0.29614	-0.14387	-0.76184	-0.017456	-0.065045	-0.016841	-0.42134	0.00055459	-0.022195	-0.031905	0.028341	-0.71729	0.018383	-0.833	-0.91875	-0.0033243	-0.604	0.032704	-0.72183	-0.70118	0.024014	-0.0033243	-0.1815	
Deletion Peak 23 - CN values	Xp21.1  	chrX:1-155270560(probes 1499966:1563776)          	chrX:30870233-34033668(probes 1512527:1513786)    	chrX:32077610-32079953(probes 1513157:1513158)  	0.22956	    0.23713		Actual Copy Change Given	-0.010646	-0.0027707	-0.071739	-0.097495	-0.07679	-0.062495	-0.064777	-0.10132	-0.056937	-0.071854	-0.10053	-0.084395	0.14191	-0.079343	0.069382	-0.038442	-0.04726	-0.099472	-0.046717	-0.067726	-0.12069	-0.045259	-0.13303	0.012097	0.10176	-0.066118	-0.078544	-0.0067813	-0.13503	0.00055459	-0.077345	-1.2929	0.056774	-0.054555	-0.10854	-0.13936	-0.086438	-0.12499	-0.16329	-0.27733	-0.17196	-0.05496	-0.05496	-0.16345	-0.12784	-0.054446	-0.16424	0.0069435	-0.096572	0.00069327	-0.081399	-0.12395	-0.015054	-0.083067	-0.093271	-0.090493	-0.2368	-0.069198	0.12005	-0.044009	-0.042446	-0.033814	-0.11208	-0.22429	-0.053611	-0.11352	0.027919	-0.015199	-0.036265	-0.031496	-0.048072	-0.072408	0.011121	-0.097363	-0.084926	-0.043059	-0.0044312	-0.090229	-0.15336	-0.26829	-0.085092	-0.0501	-0.00041585	0.064654	-0.087181	-0.066118	-0.072675	-0.087844	-0.0031579	-0.048478	-0.025301	-0.082535	-0.17094	-0.079742	-0.096968	-0.080807	-0.049559	-0.14246	-0.077212	-0.15195	-0.010232	0.31147	-0.068663	-0.088109	-0.2233	-0.12004	0.023706	0.074121	-0.15937	-0.078429	-0.10053	-0.00097017	-0.53788	-0.093438	-0.15948	-0.12829	-0.13629	-0.12644	-0.13398	-0.007472	-0.20685	0.0016642	-0.25261	0.037641	0.16145	-0.15314	-0.08094	-0.057789	-0.054825	0.0027745	-0.23386	-0.061958	-0.065947	-0.10072	-0.073343	-0.0012473	-0.099209	-0.10971	0.1158	-0.037779	-0.10545	-0.11548	-0.047395	-0.026441	-0.041974	-0.02191	-0.14412	-0.083731	-0.020001	-0.064911	-0.072675	-0.17891	0.017824	-0.097494	-0.080134	-0.11092	-0.080541	-0.040752	-0.071739	-0.068595	
