[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"         "-nVNozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "dx" ""  
[1] "dx" " " 
[1] "dx" " " 
                                       Clinical feature                        
Time to Death                          "Time to Death"                         
AGE                                    "AGE"                                   
AGE_mutation.rate                      "AGE_mutation rate"                     
NEOPLASM.DISEASESTAGE                  "NEOPLASM DISEASESTAGE"                 
PATHOLOGY.T.STAGE                      "PATHOLOGY T STAGE"                     
PATHOLOGY.N.STAGE                      "PATHOLOGY N STAGE"                     
PATHOLOGY.M.STAGE                      "PATHOLOGY M STAGE"                     
GENDER                                 "GENDER"                                
HISTOLOGICAL.TYPE                      "HISTOLOGICAL TYPE"                     
RADIATIONS.RADIATION.REGIMENINDICATION "RADIATIONS RADIATION REGIMENINDICATION"
COMPLETENESS.OF.RESECTION              "COMPLETENESS OF RESECTION"             
NUMBER.OF.LYMPH.NODES                  "NUMBER OF LYMPH NODES"                 
RACE                                   "RACE"                                  
                                       Statistical test            
Time to Death                          "Cox regression test"       
AGE                                    "Spearman correlation test" 
AGE_mutation.rate                      "Linear Regression Analysis"
NEOPLASM.DISEASESTAGE                  "Kruskal-Wallis test"       
PATHOLOGY.T.STAGE                      "Spearman correlation test" 
PATHOLOGY.N.STAGE                      "Spearman correlation test" 
PATHOLOGY.M.STAGE                      "Kruskal-Wallis test"       
GENDER                                 "Wilcoxon test"             
HISTOLOGICAL.TYPE                      "Kruskal-Wallis test"       
RADIATIONS.RADIATION.REGIMENINDICATION "Wilcoxon test"             
COMPLETENESS.OF.RESECTION              "Kruskal-Wallis test"       
NUMBER.OF.LYMPH.NODES                  "Spearman correlation test" 
RACE                                   "Kruskal-Wallis test"       
                                       Significant variables Associated with
Time to Death                          "N=0"                 " "            
AGE                                    "N=2"                 "older"        
AGE_mutation.rate                      "N=1"                 " "            
NEOPLASM.DISEASESTAGE                  "N=0"                 " "            
PATHOLOGY.T.STAGE                      "N=0"                 " "            
PATHOLOGY.N.STAGE                      "N=0"                 " "            
PATHOLOGY.M.STAGE                      "N=0"                 " "            
GENDER                                 "N=0"                 " "            
HISTOLOGICAL.TYPE                      "N=0"                 " "            
RADIATIONS.RADIATION.REGIMENINDICATION "N=0"                 " "            
COMPLETENESS.OF.RESECTION              "N=0"                 " "            
NUMBER.OF.LYMPH.NODES                  "N=0"                 " "            
RACE                                   "N=0"                 " "            
                                       &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
Time to Death                          " "                                                                                       
AGE                                    "N=2"                                                                                     
AGE_mutation.rate                      " "                                                                                       
NEOPLASM.DISEASESTAGE                  " "                                                                                       
PATHOLOGY.T.STAGE                      " "                                                                                       
PATHOLOGY.N.STAGE                      " "                                                                                       
PATHOLOGY.M.STAGE                      " "                                                                                       
GENDER                                 " "                                                                                       
HISTOLOGICAL.TYPE                      " "                                                                                       
RADIATIONS.RADIATION.REGIMENINDICATION " "                                                                                       
COMPLETENESS.OF.RESECTION              " "                                                                                       
NUMBER.OF.LYMPH.NODES                  " "                                                                                       
RACE                                   " "                                                                                       
                                       Associated with      
Time to Death                          " "             " "  
AGE                                    "younger"       "N=0"
AGE_mutation.rate                      " "             " "  
NEOPLASM.DISEASESTAGE                  " "             " "  
PATHOLOGY.T.STAGE                      " "             " "  
PATHOLOGY.N.STAGE                      " "             " "  
PATHOLOGY.M.STAGE                      " "             " "  
GENDER                                 " "             " "  
HISTOLOGICAL.TYPE                      " "             " "  
RADIATIONS.RADIATION.REGIMENINDICATION " "             " "  
COMPLETENESS.OF.RESECTION              " "             " "  
NUMBER.OF.LYMPH.NODES                  " "             " "  
RACE                                   " "             " "  
